Carg26696 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg26696
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	60S ribosomal protein L5-like
Location	Carg_Chr12: 356012 .. 359254 (-)
RNA-Seq Expression	Carg26696
Synteny	Carg26696

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGCAACAATAGGGGTTTCCACAAGCACCTTTGCACATTTGAAGAATGGACTTCCACACTTCCTTTACGCGGTGTCCCTGCTTTTCTTCCTCTTACTCCCTATTTCTCTCCATTTCACCCCTTCAGCACAGCCCTTTTCTACCATCAAACCACCAAACCATGAACTCACTTCCTCTCCTCCCCTTCTGTACTCTACCATTCCGAATTGAATTTTACTGTTTGTGCTTTGGAATCAGAGTATTCAGCGGACTGTTTATTATATTATTTTCCTCTTTGCAAAAAAAAACATGCCAAACCCGTCTCATTTTATGACTTGTTTCCAGGTTTTGTTCCGAAGCTTTTCTATTATTTTGTAGTAGTGTTAAGTGGTATATATTTTGCTCATTATGTTCGTTTATTGCCGACGATTGTTACCTGTGAATTATCACTGGCATGTCTGATATCTTCAGGCGTTTGGGGAACGATTGAAGCAACTGCATTGTTTCGCTTGATTTTGTTTTCATTGTTTAATATTGCTCCAAGCAATCAGACAAACATTTATGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGGCTTTTGCGAAAGCTCAAAAGACGAAAGCGTACTTCAAACGATACCAGGTCAAGTTCAGGAGAAGAAGAGGTATTTCCAATTTTTTGTTGTTTTATCTTGATGAATAGACTTGAAAAGTTTTTCAGTTTCTGATGTTGATCTCCTCTCCTGATAATGTACAGATGGTAAGACTGATTACCGTGCTAGGATTCGCCTCATTAATCAAGACAAGAACAAGTACAACACTCCCAAATACCGTTTTGTTATCAGATTTGTATCCTCATGCAGTTTGCTAAATAGCGCAGTTATGTTTTGTTTTATTCTCCAGTTGTTTCTTGATAAACTTGCAACGAGTGTTTTGGATCTTCCTCTCCCTTTTTCCCCTACTTCATTCCCCAACATAGGAATTTTTAGTTGGATGCTTCATTTACTTAAGAGTTACGAGATGCAGGTTCTGTGGATTGGTCTATTGATTTATTTTGCTATCTTTGATAGGCTTCCTTATGCTATTCTGTGGTATAGTTATTCATCAAATTTATTAAAATAGGATCAGTTCTTTTCCTTTTACGGTCCACATTTAAATTCCTGCAAGTTCTCAATTTTCTCTAATTTCCTTTGAATACATTTGACTTTCTGTTAATAGCTATGAGTACCTTTTTATGTGCATCTGTTGATATGAATGGTGAGCTCTACTTGTGTTCACTTGAGAAATGGGAACCTTGACGTTAATATCTAGTCTAATAAGGATATTACAGCACAAATACTATCTTCTAGTATTGCTGGTGACATGGTTCTTGCTTCAGCTTATTCTCATGAGCTGCCTCATTACGGTCTTGAAGTTGGTCTAACAAATTATGCAGCAGGTAATATTTTTGCACTGCATGTCTCTGGGTGAGTTTTTTTTCCCCATCTTTTTCTAACTTCTTCATTTGTCTGGAATGGGTGTATGAAACGTGTGTAGCCTACTGCACCGGACTTCTCTTGGCTCGCCGCGTCTTGAAGAAGCTTGAGATGGATGATGAGTACGAGGGTAATCTTGAGGTAATCTACCAGTCCCCTCCATCTTCTCTCAAAAAAGAATACTATGAAATCTAAATAAAATGAAGTTCACCTCTTCTGTTATGGCTTACCCATTCCATTAAAAGTTTTATCCACTGAAAGTATTTGTATAATTAGGTTACCGGAGAGGATTACTCTGTGGAACCCACAGATAGCCGAAGGCCTTTCAGAGCCCTCCTTGATGTAGGTTTAGTCCGAACAACAACAGGAAATCGTGTTTTTGGTGCCCTCAAGGTACTTTTAGCTATTCCATTTAAGATGAGCTTCAAGATCCGTCCTTTTTCTTCTATTTGCAATACTTTTTATATGGTTCGATGAGTGTTGCATGAGTGCCTTTATTTATTTTTTTAACCCATGGCAGGGTACAAAATGAGTAATGTATCTTGTTGAACCAATTGTACATTTATGTGACATGTATATGTGTGTATTTTCTATATTTTGTTCTTTTGAACGTCTATTTCAAATTTGAGCTTCCATGTTCATTATAATTTTGCTGCCTATTGTATTTGTGATGATAAGCTTTCAAGTTCGCTGCAGTATCTGTTCGCGATGTAATTTGAAGGATTACAAATTTCCAATTGGGACATTAAATATTAGTGGCTCTTGGTATCTTTTCTATAACCGCTGAAGCTATATATTTCACGTCACACAGGGAGCTTTAGATGGTGGATTGGATGTACCACACTCTGTCAAGAGGTTTGCTGGATTTTCAAAGGACAGCAAGGAGCTCGATGCCGAAGTTCATCGCAAATACATATTTGGAGGCCACGTTGCTGCCTATATGAGGGTAAATTTTCATAAGTTTTTTCTTTATAACTAGTACAAAAGTTTCAGTATTAGTGCACAAACGAATTAGAATAGCCATGAAAATTCGTTTTCACTCTGAGTTGTATCACCAGACCTTGATGGAGGATGAACCAGAGAAGTACCAATCGCAATTCAGTGAATATATCAAGAAGGGGATAGACGCCGACAACATTGAGGAGTTGTTGAAAAAAGTTCACTCTGCCATCCGTTCAGAACCCTTGGTGAAGAAGGTTGAGAAGCAACCACCAAAGAAGCACAAGAGGTAAATGTCGAAACTCGGTTCGTTTTTTATGATTGAACTAGCATTTTTAGTTCTGCATTCTTACGCGGTTTGTCTGATAGGTATAACTTGAAGAAGCTCACGTATGAAGAAAGGAAGGCCAAGTTGGTTGAGCGTTTGAATGCGTTGAATTCTGCTGCTGGAGCTGACGACGACGAAGACGAAGACGATGACGAGTGATTCAACCCGACACAAACTGTATTTCTACCAATTCTATCATTACAAACTCCTCAGTTTAAGTGAAAAGATTATAGATTATTTTTTGAGTCTCCCCGAGGCAATTTTGCAGCATTGTTTAAGCGTTTAGTGTTCTAGTTTTAGATTGGCAATGAAGATGTTAACTTGGTTGTGTGTTTATTTATGCCAATTGCATCTTTTATTTTCACGCAGTTGATTCATTGGATAGAATGCTTTATGCTTGGGACTGACCTAATCTTGGACGAAATAGATGGGAATTATTTTCCTTTCCGAATAAACCAGATAGGTCATTTATTTTATTTTTTTAAAAAAGAATAATTGAATGTCATAAC

mRNA sequence

ATGTTTGCAACAATAGGGGTTTCCACAAGCACCTTTGCACATTTGAAGAATGGACTTCCACACTTCCTTTACGCGGCTTTTGCGAAAGCTCAAAAGACGAAAGCGTACTTCAAACGATACCAGGTCAAGTTCAGGAGAAGAAGAGATGGTAAGACTGATTACCGTGCTAGGATTCGCCTCATTAATCAAGACAAGAACAAGTACAACACTCCCAAATACCGTTTTGTTATCAGATTTGTATCCTCATGCAGTTTGCTAAATAGCGCATCTAATAAGGATATTACAGCACAAATACTATCTTCTAGTATTGCTGGTGACATGGTTCTTGCTTCAGCTTATTCTCATGAGCTGCCTCATTACGGTCTTGAAGTTGGTCTAACAAATTATGCAGCAGCCTACTGCACCGGACTTCTCTTGGCTCGCCGCGTCTTGAAGAAGCTTGAGATGGATGATGAGTACGAGGGTAATCTTGAGGTTACCGGAGAGGATTACTCTGTGGAACCCACAGATAGCCGAAGGCCTTTCAGAGCCCTCCTTGATGTAGGTTTAGTCCGAACAACAACAGGAAATCGTGTTTTTGGTGCCCTCAAGGGAGCTTTAGATGGTGGATTGGATGTACCACACTCTGTCAAGAGGTTTGCTGGATTTTCAAAGGACAGCAAGGAGCTCGATGCCGAAGTTCATCGCAAATACATATTTGGAGGCCACGTTGCTGCCTATATGAGGACCTTGATGGAGGATGAACCAGAGAAGTACCAATCGCAATTCAGTGAATATATCAAGAAGGGGATAGACGCCGACAACATTGAGGAGTTGTTGAAAAAAGTTCACTCTGCCATCCGTTCAGAACCCTTGGTGAAGAAGGTTGAGAAGCAACCACCAAAGAAGCACAAGAGGTATAACTTGAAGAAGCTCACGTATGAAGAAAGGAAGGCCAAGTTGGTTGAGCGTTTGAATGCGTTGAATTCTGCTGCTGGAGCTGACGACGACGAAGACGAAGACGATGACGAGTGATTCAACCCGACACAAACTGTATTTCTACCAATTCTATCATTACAAACTCCTCAGTTTAAGTGAAAAGATTATAGATTATTTTTTGAGTCTCCCCGAGGCAATTTTGCAGCATTGTTTAAGCGTTTAGTGTTCTAGTTTTAGATTGGCAATGAAGATGTTAACTTGGTTGTGTGTTTATTTATGCCAATTGCATCTTTTATTTTCACGCAGTTGATTCATTGGATAGAATGCTTTATGCTTGGGACTGACCTAATCTTGGACGAAATAGATGGGAATTATTTTCCTTTCCGAATAAACCAGATAGGTCATTTATTTTATTTTTTTAAAAAAGAATAATTGAATGTCATAAC

Coding sequence (CDS)

ATGTTTGCAACAATAGGGGTTTCCACAAGCACCTTTGCACATTTGAAGAATGGACTTCCACACTTCCTTTACGCGGCTTTTGCGAAAGCTCAAAAGACGAAAGCGTACTTCAAACGATACCAGGTCAAGTTCAGGAGAAGAAGAGATGGTAAGACTGATTACCGTGCTAGGATTCGCCTCATTAATCAAGACAAGAACAAGTACAACACTCCCAAATACCGTTTTGTTATCAGATTTGTATCCTCATGCAGTTTGCTAAATAGCGCATCTAATAAGGATATTACAGCACAAATACTATCTTCTAGTATTGCTGGTGACATGGTTCTTGCTTCAGCTTATTCTCATGAGCTGCCTCATTACGGTCTTGAAGTTGGTCTAACAAATTATGCAGCAGCCTACTGCACCGGACTTCTCTTGGCTCGCCGCGTCTTGAAGAAGCTTGAGATGGATGATGAGTACGAGGGTAATCTTGAGGTTACCGGAGAGGATTACTCTGTGGAACCCACAGATAGCCGAAGGCCTTTCAGAGCCCTCCTTGATGTAGGTTTAGTCCGAACAACAACAGGAAATCGTGTTTTTGGTGCCCTCAAGGGAGCTTTAGATGGTGGATTGGATGTACCACACTCTGTCAAGAGGTTTGCTGGATTTTCAAAGGACAGCAAGGAGCTCGATGCCGAAGTTCATCGCAAATACATATTTGGAGGCCACGTTGCTGCCTATATGAGGACCTTGATGGAGGATGAACCAGAGAAGTACCAATCGCAATTCAGTGAATATATCAAGAAGGGGATAGACGCCGACAACATTGAGGAGTTGTTGAAAAAAGTTCACTCTGCCATCCGTTCAGAACCCTTGGTGAAGAAGGTTGAGAAGCAACCACCAAAGAAGCACAAGAGGTATAACTTGAAGAAGCTCACGTATGAAGAAAGGAAGGCCAAGTTGGTTGAGCGTTTGAATGCGTTGAATTCTGCTGCTGGAGCTGACGACGACGAAGACGAAGACGATGACGAGTGA

Protein sequence

MFATIGVSTSTFAHLKNGLPHFLYAAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSLLNSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGIDADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDEDDDE

Homology

[Close]

BLAST of Carg26696 vs. NCBI nr
Match: KAG7020150.1 (60S ribosomal protein L5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 650.6 bits (1677), Expect = 7.5e-183
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0


Query: 1   MFATIGVSTSTFAHLKNGLPHFLYAAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRL 60
           MFATIGVSTSTFAHLKNGLPHFLYAAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRL
Sbjct: 1   MFATIGVSTSTFAHLKNGLPHFLYAAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRL 60

Query: 61  INQDKNKYNTPKYRFVIRFVSSCSLLNSASNKDITAQILSSSIAGDMVLASAYSHELPHY 120
           INQDKNKYNTPKYRFVIRFVSSCSLLNSASNKDITAQILSSSIAGDMVLASAYSHELPHY
Sbjct: 61  INQDKNKYNTPKYRFVIRFVSSCSLLNSASNKDITAQILSSSIAGDMVLASAYSHELPHY 120

Query: 121 GLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLD 180
           GLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLD
Sbjct: 121 GLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLD 180

Query: 181 VGLVRTTTGNRVFGALKGALDGGLDVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAY 240
           VGLVRTTTGNRVFGALKGALDGGLDVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAY
Sbjct: 181 VGLVRTTTGNRVFGALKGALDGGLDVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAY 240

Query: 241 MRTLMEDEPEKYQSQFSEYIKKGIDADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRY 300
           MRTLMEDEPEKYQSQFSEYIKKGIDADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRY
Sbjct: 241 MRTLMEDEPEKYQSQFSEYIKKGIDADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRY 300

Query: 301 NLKKLTYEERKAKLVERLNALNSAAGADDDEDEDDDE 338
           NLKKLTYEERKAKLVERLNALNSAAGADDDEDEDDDE
Sbjct: 301 NLKKLTYEERKAKLVERLNALNSAAGADDDEDEDDDE 337

[Close]

BLAST of Carg26696 vs. NCBI nr
Match: XP_022951292.1 (60S ribosomal protein L5-like [Cucurbita moschata])

HSP 1 Score: 568.2 bits (1463), Expect = 4.9e-158
Identity = 297/310 (95.81%), Postives = 300/310 (96.77%), Query Frame = 0


Query: 26  AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSL 85
           AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF      
Sbjct: 2   AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF------ 61

Query: 86  LNSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 145
               SNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK
Sbjct: 62  ----SNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 121

Query: 146 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 205
           KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD
Sbjct: 122 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 181

Query: 206 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 265
           VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID
Sbjct: 182 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 241

Query: 266 ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 325
           ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA
Sbjct: 242 ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 301

Query: 326 GADDDEDEDD 336
           GADDDED+++
Sbjct: 302 GADDDEDDEE 301

[Close]

BLAST of Carg26696 vs. NCBI nr
Match: XP_023002749.1 (60S ribosomal protein L5-like [Cucurbita maxima])

HSP 1 Score: 567.0 bits (1460), Expect = 1.1e-157
Identity = 296/310 (95.48%), Postives = 300/310 (96.77%), Query Frame = 0


Query: 26  AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSL 85
           AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF      
Sbjct: 2   AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF------ 61

Query: 86  LNSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 145
               SNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK
Sbjct: 62  ----SNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 121

Query: 146 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 205
           KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD
Sbjct: 122 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 181

Query: 206 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 265
           VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID
Sbjct: 182 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 241

Query: 266 ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 325
           ADNIEELLKKVHSAIRSEPL+KKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA
Sbjct: 242 ADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 301

Query: 326 GADDDEDEDD 336
           GADDDED+++
Sbjct: 302 GADDDEDDEE 301

[Close]

BLAST of Carg26696 vs. NCBI nr
Match: KAG6585230.1 (60S ribosomal protein L5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 566.6 bits (1459), Expect = 1.4e-157
Identity = 296/310 (95.48%), Postives = 300/310 (96.77%), Query Frame = 0


Query: 26  AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSL 85
           AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF      
Sbjct: 2   AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF------ 61

Query: 86  LNSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 145
               SNKDITAQILSSSIAGDMVLASAYSHELPH+GLEVGLTNYAAAYCTGLLLARRVLK
Sbjct: 62  ----SNKDITAQILSSSIAGDMVLASAYSHELPHFGLEVGLTNYAAAYCTGLLLARRVLK 121

Query: 146 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 205
           KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD
Sbjct: 122 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 181

Query: 206 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 265
           VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID
Sbjct: 182 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 241

Query: 266 ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 325
           ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA
Sbjct: 242 ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 301

Query: 326 GADDDEDEDD 336
           GADDDED+++
Sbjct: 302 GADDDEDDEE 301

[Close]

BLAST of Carg26696 vs. NCBI nr
Match: XP_023538585.1 (60S ribosomal protein L5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 565.5 bits (1456), Expect = 3.2e-157
Identity = 294/310 (94.84%), Postives = 300/310 (96.77%), Query Frame = 0


Query: 26  AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSL 85
           AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF      
Sbjct: 2   AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF------ 61

Query: 86  LNSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 145
               SNKDITAQILSSSIAGDMVLASAYSH+LPHYGLEVGLTNYAAAYCTGLLLARRVLK
Sbjct: 62  ----SNKDITAQILSSSIAGDMVLASAYSHDLPHYGLEVGLTNYAAAYCTGLLLARRVLK 121

Query: 146 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 205
           KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD
Sbjct: 122 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 181

Query: 206 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 265
           VPHSVKRFAGFSKDSKELDAEVHRKYIFGGH+AAYMRTLMEDEPEKYQSQFSEYIKKGID
Sbjct: 182 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHIAAYMRTLMEDEPEKYQSQFSEYIKKGID 241

Query: 266 ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 325
           ADNIEELLKKVHSAIRSEPL+KKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA
Sbjct: 242 ADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 301

Query: 326 GADDDEDEDD 336
           GADDDED+++
Sbjct: 302 GADDDEDDEE 301

[Close]

BLAST of Carg26696 vs. ExPASy Swiss-Prot
Match: Q6UNT2 (60S ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=RPL5 PE=2 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 2.8e-140
Identity = 255/311 (81.99%), Postives = 280/311 (90.03%), Query Frame = 0


Query: 26  AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSL 85
           AFAKAQKTKAYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFV+R       
Sbjct: 2   AFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVR------- 61

Query: 86  LNSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 145
               SNKDITAQI+S+SIAGD+VLASAYSHELP YGLEVGLTNYAAAYCTGLLLARRVLK
Sbjct: 62  ---TSNKDITAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLK 121

Query: 146 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 205
            LEMD EYEGN+E TGEDYSVEP D+RRPFRALLDVGL+RTTTGNRVFGALKGALDGGLD
Sbjct: 122 MLEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLD 181

Query: 206 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 265
           +PHS KRFAG++K+ ++LD EVHRKYIFGGHVAAYMRTLMEDEPEKYQS FSEYIKKGI+
Sbjct: 182 IPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIE 241

Query: 266 ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 325
           AD +E L KKVH+AIR+ P+ KK +K  PK HKRYNLKKLTY+ERKA+LVERLNALNSAA
Sbjct: 242 ADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAA 301

Query: 326 GADDDEDEDDD 337
             DDD+DEDD+
Sbjct: 302 DGDDDDDEDDE 302

[Close]

BLAST of Carg26696 vs. ExPASy Swiss-Prot
Match: P49227 (60S ribosomal protein L5-2 OS=Arabidopsis thaliana OX=3702 GN=RPL5B PE=2 SV=3)

HSP 1 Score: 469.2 bits (1206), Expect = 4.0e-131
Identity = 237/309 (76.70%), Postives = 270/309 (87.38%), Query Frame = 0


Query: 27  FAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSLL 86
           F K+ K+ AYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFV+RF       
Sbjct: 3   FVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRF------- 62

Query: 87  NSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKK 146
              +NKDI AQI+S+SIAGD+V ASAY+HELP YGL VGLTNYAAAYCTGLLLARRVLK 
Sbjct: 63  ---TNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKM 122

Query: 147 LEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDV 206
           LEMDDEYEGN+E TGED+SVEPTDSRRPFRALLDVGL+RTTTGNRVFGALKGALDGGLD+
Sbjct: 123 LEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDI 182

Query: 207 PHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGIDA 266
           PHS KRFAGF K++K+LDAE+HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG++A
Sbjct: 183 PHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEA 242

Query: 267 DNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAG 326
           ++IEE+ KKVH+AIR+EP  KK EK  PK+HKRYNLKKLTYEERK KL+ER+ ALN A G
Sbjct: 243 ESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAGG 301

Query: 327 ADDDEDEDD 336
            DDDED+++
Sbjct: 303 DDDDEDDEE 301

[Close]

BLAST of Carg26696 vs. ExPASy Swiss-Prot
Match: Q8LBI1 (60S ribosomal protein L5-1 OS=Arabidopsis thaliana OX=3702 GN=RPL5A PE=1 SV=2)

HSP 1 Score: 465.7 bits (1197), Expect = 4.5e-130
Identity = 236/309 (76.38%), Postives = 269/309 (87.06%), Query Frame = 0


Query: 27  FAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSLL 86
           F K+ K+ AYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFV+RF       
Sbjct: 3   FVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRF------- 62

Query: 87  NSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKK 146
              +NKDI AQI+S+SIAGD+V ASAY+HELP YGL VGLTNYAAAYCTGLLLARRVLK 
Sbjct: 63  ---TNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKM 122

Query: 147 LEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDV 206
           LEMDDEYEGN+E TGED+SVEPTDSRRPFRALLDVGL+RTTTGNRVFGALKGALDGGLD+
Sbjct: 123 LEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDI 182

Query: 207 PHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGIDA 266
           PHS KRFAGF K++K+LDAE+HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG++A
Sbjct: 183 PHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEA 242

Query: 267 DNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAG 326
           ++IEEL KKVH+AIR++P  KK  K  PK+HKRYNLKKLTYEERK KL+ER+ ALN A G
Sbjct: 243 ESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGG 301

Query: 327 ADDDEDEDD 336
            DDDED+++
Sbjct: 303 DDDDEDDEE 301

[Close]

BLAST of Carg26696 vs. ExPASy Swiss-Prot
Match: A2WXX3 (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica OX=39946 GN=RPL5A PE=3 SV=2)

HSP 1 Score: 463.0 bits (1190), Expect = 2.9e-129
Identity = 232/311 (74.60%), Postives = 269/311 (86.50%), Query Frame = 0


Query: 27  FAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSLL 86
           F K QKT AY+KR+QVKF+RRR GKTDYRARIRL NQDKNKYNTPKYRFV+RF       
Sbjct: 4   FVKTQKTNAYYKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRF------- 63

Query: 87  NSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKK 146
              +NKDITAQI+ ++IAGD+V+A+AYSHELP YGLEVGLTNYAAAYCTGLLLARRVLK 
Sbjct: 64  ---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKL 123

Query: 147 LEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDV 206
             +D EYEGN+E TGEDY VEP D RRPFRALLDVGL+RTTTGNRVFGALKGALDGGLD+
Sbjct: 124 RGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDI 183

Query: 207 PHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGIDA 266
           PHS KRFAGF KD K+LD+++HRKYI+GGHVA YMR++ E+EPEK+Q+ FSEY+KKGIDA
Sbjct: 184 PHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDA 243

Query: 267 DNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAG 326
           D +E L KKVH+AIR++P + K  K+ P  HKRYNLKKLTYE+RKA LVERLNALNS+AG
Sbjct: 244 DGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAG 303

Query: 327 ADDDEDEDDDE 338
           ADDD++E+DDE
Sbjct: 304 ADDDDEEEDDE 304

[Close]

BLAST of Carg26696 vs. ExPASy Swiss-Prot
Match: Q0JGY1 (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL5A PE=2 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 8.4e-129
Identity = 232/311 (74.60%), Postives = 268/311 (86.17%), Query Frame = 0


Query: 27  FAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSLL 86
           F K QKT AY KR+QVKF+RRR GKTDYRARIRL NQDKNKYNTPKYRFV+RF       
Sbjct: 4   FVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRF------- 63

Query: 87  NSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKK 146
              +NKDITAQI+ ++IAGD+V+A+AYSHELP YGLEVGLTNYAAAYCTGLLLARRVLK 
Sbjct: 64  ---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKL 123

Query: 147 LEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDV 206
             +D EYEGN+E TGEDY VEP D RRPFRALLDVGL+RTTTGNRVFGALKGALDGGLD+
Sbjct: 124 RGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDI 183

Query: 207 PHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGIDA 266
           PHS KRFAGF KD K+LD+++HRKYI+GGHVA YMR++ E+EPEK+Q+ FSEY+KKGIDA
Sbjct: 184 PHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDA 243

Query: 267 DNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAG 326
           D +E L KKVH+AIR++P + K  K+ P  HKRYNLKKLTYE+RKA LVERLNALNS+AG
Sbjct: 244 DGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAG 303

Query: 327 ADDDEDEDDDE 338
           ADDD++E+DDE
Sbjct: 304 ADDDDEEEDDE 304

[Close]

BLAST of Carg26696 vs. ExPASy TrEMBL
Match: A0A6J1GH83 (60S ribosomal protein L5-like OS=Cucurbita moschata OX=3662 GN=LOC111454170 PE=3 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 2.4e-158
Identity = 297/310 (95.81%), Postives = 300/310 (96.77%), Query Frame = 0


Query: 26  AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSL 85
           AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF      
Sbjct: 2   AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF------ 61

Query: 86  LNSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 145
               SNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK
Sbjct: 62  ----SNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 121

Query: 146 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 205
           KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD
Sbjct: 122 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 181

Query: 206 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 265
           VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID
Sbjct: 182 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 241

Query: 266 ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 325
           ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA
Sbjct: 242 ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 301

Query: 326 GADDDEDEDD 336
           GADDDED+++
Sbjct: 302 GADDDEDDEE 301

[Close]

BLAST of Carg26696 vs. ExPASy TrEMBL
Match: A0A6J1KRC2 (60S ribosomal protein L5-like OS=Cucurbita maxima OX=3661 GN=LOC111496513 PE=3 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 5.3e-158
Identity = 296/310 (95.48%), Postives = 300/310 (96.77%), Query Frame = 0


Query: 26  AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSL 85
           AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF      
Sbjct: 2   AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF------ 61

Query: 86  LNSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 145
               SNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK
Sbjct: 62  ----SNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 121

Query: 146 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 205
           KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD
Sbjct: 122 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 181

Query: 206 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 265
           VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID
Sbjct: 182 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 241

Query: 266 ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 325
           ADNIEELLKKVHSAIRSEPL+KKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA
Sbjct: 242 ADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 301

Query: 326 GADDDEDEDD 336
           GADDDED+++
Sbjct: 302 GADDDEDDEE 301

[Close]

BLAST of Carg26696 vs. ExPASy TrEMBL
Match: A0A6J1BRE1 (60S ribosomal protein L5-like OS=Momordica charantia OX=3673 GN=LOC111004895 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.4e-149
Identity = 277/310 (89.35%), Postives = 294/310 (94.84%), Query Frame = 0


Query: 26  AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSL 85
           AFAKAQKTKAYFKRYQVK++RRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF      
Sbjct: 2   AFAKAQKTKAYFKRYQVKYKRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF------ 61

Query: 86  LNSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 145
               +NKDITAQI+SSSIAGDMVLA+AYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK
Sbjct: 62  ----TNKDITAQIVSSSIAGDMVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 121

Query: 146 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 205
            LEMD EYEGNLEVTGED+SVEPTD+RRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD
Sbjct: 122 SLEMDKEYEGNLEVTGEDFSVEPTDNRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 181

Query: 206 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 265
           VPHSVKRFAGFSKD+KELDAEVHRKYIFGGHVAAYMR+LMEDEPEKYQS FS+YIKKGI+
Sbjct: 182 VPHSVKRFAGFSKDNKELDAEVHRKYIFGGHVAAYMRSLMEDEPEKYQSHFSDYIKKGIE 241

Query: 266 ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 325
            DNIEELLKKVH+AIRSEPLVKK EKQPPK+HKR+NLKKLTYEERKAKLVERLNALNSAA
Sbjct: 242 PDNIEELLKKVHAAIRSEPLVKKTEKQPPKEHKRFNLKKLTYEERKAKLVERLNALNSAA 301

Query: 326 GADDDEDEDD 336
           GADDD+ +D+
Sbjct: 302 GADDDDXDDE 301

[Close]

BLAST of Carg26696 vs. ExPASy TrEMBL
Match: A0A5A7VC42 (60S ribosomal protein L5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00440 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.8e-149
Identity = 277/310 (89.35%), Postives = 292/310 (94.19%), Query Frame = 0


Query: 26  AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSL 85
           AFAKAQKTKAYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFVIRF      
Sbjct: 2   AFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRF------ 61

Query: 86  LNSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 145
               +NKDITAQI+SSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK
Sbjct: 62  ----TNKDITAQIVSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 121

Query: 146 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 205
           KLEMDDEYEGNLE TGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD
Sbjct: 122 KLEMDDEYEGNLEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 181

Query: 206 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 265
           VPHSVKRFAGFSK + EL+A+VHRKYIFGGHVAAYMRTLMEDEPEKYQ+QFS+YIKKGI+
Sbjct: 182 VPHSVKRFAGFSKGNNELNADVHRKYIFGGHVAAYMRTLMEDEPEKYQTQFSDYIKKGIE 241

Query: 266 ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 325
            DNIEELLKKVHSAIR+EPL K  EKQPPK HKRYNLKKLTYE+RKAKLVERLNALNSAA
Sbjct: 242 PDNIEELLKKVHSAIRAEPLAKTTEKQPPKTHKRYNLKKLTYEQRKAKLVERLNALNSAA 301

Query: 326 GADDDEDEDD 336
           GADDDED+++
Sbjct: 302 GADDDEDDEE 301

[Close]

BLAST of Carg26696 vs. ExPASy TrEMBL
Match: A0A1S3BCD6 (60S ribosomal protein L5-like OS=Cucumis melo OX=3656 GN=LOC103488491 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.8e-149
Identity = 277/310 (89.35%), Postives = 292/310 (94.19%), Query Frame = 0


Query: 26  AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSL 85
           AFAKAQKTKAYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFVIRF      
Sbjct: 2   AFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRF------ 61

Query: 86  LNSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 145
               +NKDITAQI+SSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK
Sbjct: 62  ----TNKDITAQIVSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 121

Query: 146 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 205
           KLEMDDEYEGNLE TGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD
Sbjct: 122 KLEMDDEYEGNLEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 181

Query: 206 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 265
           VPHSVKRFAGFSK + EL+A+VHRKYIFGGHVAAYMRTLMEDEPEKYQ+QFS+YIKKGI+
Sbjct: 182 VPHSVKRFAGFSKGNNELNADVHRKYIFGGHVAAYMRTLMEDEPEKYQTQFSDYIKKGIE 241

Query: 266 ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 325
            DNIEELLKKVHSAIR+EPL K  EKQPPK HKRYNLKKLTYE+RKAKLVERLNALNSAA
Sbjct: 242 PDNIEELLKKVHSAIRAEPLAKTTEKQPPKTHKRYNLKKLTYEQRKAKLVERLNALNSAA 301

Query: 326 GADDDEDEDD 336
           GADDDED+++
Sbjct: 302 GADDDEDDEE 301

[Close]

BLAST of Carg26696 vs. TAIR 10
Match: AT5G39740.1 (ribosomal protein L5 B )

HSP 1 Score: 469.2 bits (1206), Expect = 2.9e-132
Identity = 237/309 (76.70%), Postives = 270/309 (87.38%), Query Frame = 0


Query: 27  FAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSLL 86
           F K+ K+ AYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFV+RF       
Sbjct: 3   FVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRF------- 62

Query: 87  NSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKK 146
              +NKDI AQI+S+SIAGD+V ASAY+HELP YGL VGLTNYAAAYCTGLLLARRVLK 
Sbjct: 63  ---TNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKM 122

Query: 147 LEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDV 206
           LEMDDEYEGN+E TGED+SVEPTDSRRPFRALLDVGL+RTTTGNRVFGALKGALDGGLD+
Sbjct: 123 LEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDI 182

Query: 207 PHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGIDA 266
           PHS KRFAGF K++K+LDAE+HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG++A
Sbjct: 183 PHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEA 242

Query: 267 DNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAG 326
           ++IEE+ KKVH+AIR+EP  KK EK  PK+HKRYNLKKLTYEERK KL+ER+ ALN A G
Sbjct: 243 ESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAGG 301

Query: 327 ADDDEDEDD 336
            DDDED+++
Sbjct: 303 DDDDEDDEE 301

[Close]

BLAST of Carg26696 vs. TAIR 10
Match: AT5G39740.2 (ribosomal protein L5 B )

HSP 1 Score: 469.2 bits (1206), Expect = 2.9e-132
Identity = 237/309 (76.70%), Postives = 270/309 (87.38%), Query Frame = 0


Query: 27  FAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSLL 86
           F K+ K+ AYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFV+RF       
Sbjct: 3   FVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRF------- 62

Query: 87  NSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKK 146
              +NKDI AQI+S+SIAGD+V ASAY+HELP YGL VGLTNYAAAYCTGLLLARRVLK 
Sbjct: 63  ---TNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKM 122

Query: 147 LEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDV 206
           LEMDDEYEGN+E TGED+SVEPTDSRRPFRALLDVGL+RTTTGNRVFGALKGALDGGLD+
Sbjct: 123 LEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDI 182

Query: 207 PHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGIDA 266
           PHS KRFAGF K++K+LDAE+HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG++A
Sbjct: 183 PHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEA 242

Query: 267 DNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAG 326
           ++IEE+ KKVH+AIR+EP  KK EK  PK+HKRYNLKKLTYEERK KL+ER+ ALN A G
Sbjct: 243 ESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAGG 301

Query: 327 ADDDEDEDD 336
            DDDED+++
Sbjct: 303 DDDDEDDEE 301

[Close]

BLAST of Carg26696 vs. TAIR 10
Match: AT3G25520.1 (ribosomal protein L5 )

HSP 1 Score: 465.7 bits (1197), Expect = 3.2e-131
Identity = 236/309 (76.38%), Postives = 269/309 (87.06%), Query Frame = 0


Query: 27  FAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSLL 86
           F K+ K+ AYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFV+RF       
Sbjct: 3   FVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRF------- 62

Query: 87  NSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKK 146
              +NKDI AQI+S+SIAGD+V ASAY+HELP YGL VGLTNYAAAYCTGLLLARRVLK 
Sbjct: 63  ---TNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKM 122

Query: 147 LEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDV 206
           LEMDDEYEGN+E TGED+SVEPTDSRRPFRALLDVGL+RTTTGNRVFGALKGALDGGLD+
Sbjct: 123 LEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDI 182

Query: 207 PHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGIDA 266
           PHS KRFAGF K++K+LDAE+HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG++A
Sbjct: 183 PHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEA 242

Query: 267 DNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAG 326
           ++IEEL KKVH+AIR++P  KK  K  PK+HKRYNLKKLTYEERK KL+ER+ ALN A G
Sbjct: 243 ESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGG 301

Query: 327 ADDDEDEDD 336
            DDDED+++
Sbjct: 303 DDDDEDDEE 301

[Close]

BLAST of Carg26696 vs. TAIR 10
Match: AT3G25520.2 (ribosomal protein L5 )

HSP 1 Score: 290.4 bits (742), Expect = 1.8e-78
Identity = 142/189 (75.13%), Postives = 167/189 (88.36%), Query Frame = 0


Query: 147 LEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDV 206
           LEMDDEYEGN+E TGED+SVEPTDSRRPFRALLDVGL+RTTTGNRVFGALKGALDGGLD+
Sbjct: 2   LEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDI 61

Query: 207 PHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGIDA 266
           PHS KRFAGF K++K+LDAE+HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG++A
Sbjct: 62  PHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEA 121

Query: 267 DNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAG 326
           ++IEEL KKVH+AIR++P  KK  K  PK+HKRYNLKKLTYEERK KL+ER+ ALN A G
Sbjct: 122 ESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGG 181

Query: 327 ADDDEDEDD 336
            DDDED+++
Sbjct: 182 DDDDEDDEE 190

The following BLAST results are available for this feature:

BLAST of Carg26696 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020150.1	7.5e-183	100.00	60S ribosomal protein L5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022951292.1	4.9e-158	95.81	60S ribosomal protein L5-like [Cucurbita moschata]	[more]
XP_023002749.1	1.1e-157	95.48	60S ribosomal protein L5-like [Cucurbita maxima]	[more]
KAG6585230.1	1.4e-157	95.48	60S ribosomal protein L5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023538585.1	3.2e-157	94.84	60S ribosomal protein L5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg26696 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6UNT2	2.8e-140	81.99	60S ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=RPL5 PE=2 SV=1	[more]
P49227	4.0e-131	76.70	60S ribosomal protein L5-2 OS=Arabidopsis thaliana OX=3702 GN=RPL5B PE=2 SV=3	[more]
Q8LBI1	4.5e-130	76.38	60S ribosomal protein L5-1 OS=Arabidopsis thaliana OX=3702 GN=RPL5A PE=1 SV=2	[more]
A2WXX3	2.9e-129	74.60	60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica OX=39946 GN=RPL5A PE=3 ...	[more]
Q0JGY1	8.4e-129	74.60	60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL5A PE=...	[more]

BLAST of Carg26696 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GH83	2.4e-158	95.81	60S ribosomal protein L5-like OS=Cucurbita moschata OX=3662 GN=LOC111454170 PE=3...	[more]
A0A6J1KRC2	5.3e-158	95.48	60S ribosomal protein L5-like OS=Cucurbita maxima OX=3661 GN=LOC111496513 PE=3 S...	[more]
A0A6J1BRE1	3.4e-149	89.35	60S ribosomal protein L5-like OS=Momordica charantia OX=3673 GN=LOC111004895 PE=...	[more]
A0A5A7VC42	5.8e-149	89.35	60S ribosomal protein L5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BCD6	5.8e-149	89.35	60S ribosomal protein L5-like OS=Cucumis melo OX=3656 GN=LOC103488491 PE=3 SV=1	[more]

BLAST of Carg26696 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39740.1	2.9e-132	76.70	ribosomal protein L5 B	[more]
AT5G39740.2	2.9e-132	76.70	ribosomal protein L5 B	[more]
AT3G25520.1	3.2e-131	76.38	ribosomal protein L5	[more]
AT3G25520.2	1.8e-78	75.13	ribosomal protein L5	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 304..324
None	No IPR available	GENE3D	3.30.420.100		coord: 25..325 e-value: 6.3E-139 score: 464.6
None	No IPR available	PANTHER	PTHR23410:SF28	SUBFAMILY NOT NAMED	coord: 26..331
None	No IPR available	CDD	cd00432	Ribosomal_L18_L5e	coord: 65..204 e-value: 6.30211E-24 score: 92.2179
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 35..285
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PRINTS	PR00058	RIBOSOMALL5	coord: 198..217 score: 66.88 coord: 240..260 score: 52.98 coord: 178..197 score: 77.19 coord: 67..86 score: 48.75 coord: 44..63 score: 74.06
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PFAM	PF17144	Ribosomal_L5e	coord: 38..209 e-value: 1.8E-76 score: 255.7
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PANTHER	PTHR23410	RIBOSOMAL PROTEIN L5-RELATED	coord: 26..331
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	HAMAP	MF_01337_A	Ribosomal_L18_A	coord: 38..280 score: 18.922144
IPR025607	Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminal	PFAM	PF14204	Ribosomal_L18_c	coord: 225..315 e-value: 1.6E-34 score: 118.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26696-RA	Carg26696-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome