Carg26581 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg26581
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-type E3 ubiquitin transferase
Location	Carg_Chr02: 4352594 .. 4353730 (+)
RNA-Seq Expression	Carg26581
Synteny	Carg26581

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCGGTACGGCGTCGTATTGGTGTTACCGGTGCAACCGATTCGTTCGTGCTTGGGTTCAAGACACCATATCTTGTCCTTACTGTGACGGTGGATTTGTTGAAGCAATCGAAACCGCGTCTTCTCTCCCGGCGGCGAATCTCCACCGTCGATTCTCGCCGTCTGCGATTCACACTTTGGATCAAGATCCGTTTCAGTCTCCTCGCTTGAGCACCCGGCGAAGTCGCCGTAGACTTGGGGATCGGTCGACTTTTAACCCTGTTGTTGTTCTTCGTGGTTCTGCCGACGGTGGCGATGAGGGCGGCGGTGGTGGGGAGAATAATAGCTTCGATATTTACTATGACGATGGTGCTGGGTCTGGTCTTCGGCCGGTTCCGGCGACGATGTCGGAGTTTCTGATGGGGACTGGATTTGATCGGTTGTTGGAGCAGTTGGCTCAACTGGAGATCAACGGGTTTGGCAGATCTGAAAATCCGCCGGCGTCGAAAGCAGCGGTGGAATCAATGCCGACGATTGAGATTTTGGAAAGTCACGTGGATTCAGATTCGCACTGTGCGGTTTGTAAAGAGGCGTTTGAAATAGGAACCGAAGCCCGAGAAATGCCCTGTAAGCACATATATCACTCCGATTGCATAATCCCTTGGCTTTCGATGAGAAATTCCTGTCCGGTCTGCCGACACGAACTGCCATCGGAACGCGTATCTCCAGCCGGCGGGGTTTCAGATCGCGTGGTCGACGAAGAGACCGTAGGGTTAACAATCTGGAGACTCCCTGGAGGTGGATTCGCCGTTGGCCGATTCACCGGCGGTAGACTGACCGGCGAGAGAGATCCACCAGCGGTCTACACCGAAATGGACGGTGGATTCAATGCCAACGGAGCTCCGAGAAGGGTCTCGTGGGCTTCGAGAAGAAGCAGGGGAAGGGAAAACCGAGGAATCGGACGAACATTCCGTAACATCTTTTCTTTTTTCGGAAGATTAAGGTCTTCGAATTCATCTTCTTCTTTGGCTTCGAATGAAACTGAATCTGTTAGTAGAAGCCATAGCCGTTCGAGCTCTTCAGTCTTCAGCAGATACTTGCGAAGGCCAAACAGAACTTGGCTGGAGAATCATACTGAAAATGGCCGATGGTGA

mRNA sequence

ATGGCTTCCGGTACGGCGTCGTATTGGTGTTACCGGTGCAACCGATTCGTTCGTGCTTGGGTTCAAGACACCATATCTTGTCCTTACTGTGACGGTGGATTTGTTGAAGCAATCGAAACCGCGTCTTCTCTCCCGGCGGCGAATCTCCACCGTCGATTCTCGCCGTCTGCGATTCACACTTTGGATCAAGATCCGTTTCAGTCTCCTCGCTTGAGCACCCGGCGAAGTCGCCGTAGACTTGGGGATCGGTCGACTTTTAACCCTGTTGTTGTTCTTCGTGGTTCTGCCGACGGTGGCGATGAGGGCGGCGGTGGTGGGGAGAATAATAGCTTCGATATTTACTATGACGATGGTGCTGGGTCTGGTCTTCGGCCGGTTCCGGCGACGATGTCGGAGTTTCTGATGGGGACTGGATTTGATCGGTTGTTGGAGCAGTTGGCTCAACTGGAGATCAACGGGTTTGGCAGATCTGAAAATCCGCCGGCGTCGAAAGCAGCGGTGGAATCAATGCCGACGATTGAGATTTTGGAAAGTCACGTGGATTCAGATTCGCACTGTGCGGTTTGTAAAGAGGCGTTTGAAATAGGAACCGAAGCCCGAGAAATGCCCTGTAAGCACATATATCACTCCGATTGCATAATCCCTTGGCTTTCGATGAGAAATTCCTGTCCGGTCTGCCGACACGAACTGCCATCGGAACGCGTATCTCCAGCCGGCGGGGTTTCAGATCGCGTGGTCGACGAAGAGACCGTAGGGTTAACAATCTGGAGACTCCCTGGAGGTGGATTCGCCGTTGGCCGATTCACCGGCGGTAGACTGACCGGCGAGAGAGATCCACCAGCGGTCTACACCGAAATGGACGGTGGATTCAATGCCAACGGAGCTCCGAGAAGGGTCTCGTGGGCTTCGAGAAGAAGCAGGGGAAGGGAAAACCGAGGAATCGGACGAACATTCCGTAACATCTTTTCTTTTTTCGGAAGATTAAGGTCTTCGAATTCATCTTCTTCTTTGGCTTCGAATGAAACTGAATCTGTTAGTAGAAGCCATAGCCGTTCGAGCTCTTCAGTCTTCAGCAGATACTTGCGAAGGCCAAACAGAACTTGGCTGGAGAATCATACTGAAAATGGCCGATGGTGA

Coding sequence (CDS)

ATGGCTTCCGGTACGGCGTCGTATTGGTGTTACCGGTGCAACCGATTCGTTCGTGCTTGGGTTCAAGACACCATATCTTGTCCTTACTGTGACGGTGGATTTGTTGAAGCAATCGAAACCGCGTCTTCTCTCCCGGCGGCGAATCTCCACCGTCGATTCTCGCCGTCTGCGATTCACACTTTGGATCAAGATCCGTTTCAGTCTCCTCGCTTGAGCACCCGGCGAAGTCGCCGTAGACTTGGGGATCGGTCGACTTTTAACCCTGTTGTTGTTCTTCGTGGTTCTGCCGACGGTGGCGATGAGGGCGGCGGTGGTGGGGAGAATAATAGCTTCGATATTTACTATGACGATGGTGCTGGGTCTGGTCTTCGGCCGGTTCCGGCGACGATGTCGGAGTTTCTGATGGGGACTGGATTTGATCGGTTGTTGGAGCAGTTGGCTCAACTGGAGATCAACGGGTTTGGCAGATCTGAAAATCCGCCGGCGTCGAAAGCAGCGGTGGAATCAATGCCGACGATTGAGATTTTGGAAAGTCACGTGGATTCAGATTCGCACTGTGCGGTTTGTAAAGAGGCGTTTGAAATAGGAACCGAAGCCCGAGAAATGCCCTGTAAGCACATATATCACTCCGATTGCATAATCCCTTGGCTTTCGATGAGAAATTCCTGTCCGGTCTGCCGACACGAACTGCCATCGGAACGCGTATCTCCAGCCGGCGGGGTTTCAGATCGCGTGGTCGACGAAGAGACCGTAGGGTTAACAATCTGGAGACTCCCTGGAGGTGGATTCGCCGTTGGCCGATTCACCGGCGGTAGACTGACCGGCGAGAGAGATCCACCAGCGGTCTACACCGAAATGGACGGTGGATTCAATGCCAACGGAGCTCCGAGAAGGGTCTCGTGGGCTTCGAGAAGAAGCAGGGGAAGGGAAAACCGAGGAATCGGACGAACATTCCGTAACATCTTTTCTTTTTTCGGAAGATTAAGGTCTTCGAATTCATCTTCTTCTTTGGCTTCGAATGAAACTGAATCTGTTAGTAGAAGCCATAGCCGTTCGAGCTCTTCAGTCTTCAGCAGATACTTGCGAAGGCCAAACAGAACTTGGCTGGAGAATCATACTGAAAATGGCCGATGGTGA

Protein sequence

MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHTLDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVDSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGVSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVSWASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRYLRRPNRTWLENHTENGRW

Homology

[Close]

BLAST of Carg26581 vs. NCBI nr
Match: XP_022947282.1 (E3 ubiquitin-protein ligase RDUF2-like [Cucurbita moschata] >KAG6605446.1 E3 ubiquitin-protein ligase RDUF1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035394.1 E3 ubiquitin-protein ligase RDUF1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 766.5 bits (1978), Expect = 1.0e-217
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT
Sbjct: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120
           LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG
Sbjct: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360
           WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY
Sbjct: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360

Query: 361 LRRPNRTWLENHTENGRW 379
           LRRPNRTWLENHTENGRW
Sbjct: 361 LRRPNRTWLENHTENGRW 378

[Close]

BLAST of Carg26581 vs. NCBI nr
Match: XP_023532253.1 (E3 ubiquitin-protein ligase RDUF2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 765.0 bits (1974), Expect = 3.0e-217
Identity = 377/378 (99.74%), Postives = 378/378 (100.00%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT
Sbjct: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120
           LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG
Sbjct: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360
           WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY
Sbjct: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360

Query: 361 LRRPNRTWLENHTENGRW 379
           LRRPNR+WLENHTENGRW
Sbjct: 361 LRRPNRSWLENHTENGRW 378

[Close]

BLAST of Carg26581 vs. NCBI nr
Match: XP_023007108.1 (E3 ubiquitin-protein ligase RDUF2-like [Cucurbita maxima])

HSP 1 Score: 762.3 bits (1967), Expect = 2.0e-216
Identity = 376/378 (99.47%), Postives = 376/378 (99.47%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT
Sbjct: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120
           LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG
Sbjct: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAF IGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFVIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANG PRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGVPRRVS 300

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360
           WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY
Sbjct: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360

Query: 361 LRRPNRTWLENHTENGRW 379
           LRRPNRTWLENHTENGRW
Sbjct: 361 LRRPNRTWLENHTENGRW 378

[Close]

BLAST of Carg26581 vs. NCBI nr
Match: XP_038902866.1 (E3 ubiquitin-protein ligase RDUF1 [Benincasa hispida])

HSP 1 Score: 703.4 bits (1814), Expect = 1.1e-198
Identity = 352/379 (92.88%), Postives = 358/379 (94.46%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           M+SGTASYWCYRCNRFVRAW QD+I+CPYCDGGFVEAIETASSLPAANLHRRFSPS IHT
Sbjct: 1   MSSGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAANLHRRFSPSTIHT 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120
           LDQD FQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGD   GGGE NSFDIYYDDGAG
Sbjct: 61  LDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDV-VGGGERNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAG 
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGS 240

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRF GGRL GERD PAVYTEMDGGFNANGAPRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDTPAVYTEMDGGFNANGAPRRVS 300

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360
           WASRRSRGRE+RGIGRTFRNIFSFFGR RSS SSSS  SN++ESVSRSHS SSSSVFSRY
Sbjct: 301 WASRRSRGRESRGIGRTFRNIFSFFGRFRSSTSSSSSPSNDSESVSRSHSHSSSSVFSRY 360

Query: 361 LRRPNRTW-LENHTENGRW 379
           LRR NR W LEN  ENGRW
Sbjct: 361 LRRQNRAWVLENQNENGRW 378

[Close]

BLAST of Carg26581 vs. NCBI nr
Match: XP_004143127.2 (E3 ubiquitin-protein ligase RDUF1, partial [Cucumis sativus])

HSP 1 Score: 698.7 bits (1802), Expect = 2.7e-197
Identity = 348/379 (91.82%), Postives = 358/379 (94.46%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           M++GTASYWCYRCNRFVRAW QD+I+CPYCDGGFVEAIETASSLP +NLHRR SPSAIHT
Sbjct: 37  MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPPSNLHRRLSPSAIHT 96

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120
           LDQD FQSPRLSTRRSRRRLGDRSTFNPVVVLRGSAD GD   GGGE NSFDIYYDDGAG
Sbjct: 97  LDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDV-VGGGERNSFDIYYDDGAG 156

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 157 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 216

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIGTEAREMPCKHIYHS+CIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 217 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRHELPSERVSPAGG 276

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRF+GGRL GERDPPAVYTEMDGGFN NG PRRVS
Sbjct: 277 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNGNGVPRRVS 336

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360
           WASRRSRGRE+RGIGRTFRNIFSFFGR RSS+SSSS  SNE+ESVSRSHS SSSSVFSRY
Sbjct: 337 WASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRY 396

Query: 361 LRRPNRTW-LENHTENGRW 379
           LRR NR W LEN  ENGRW
Sbjct: 397 LRRQNRAWVLENQNENGRW 414

[Close]

BLAST of Carg26581 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 6.4e-85
Identity = 188/394 (47.72%), Postives = 249/394 (63.20%), Query Frame = 0


Query: 5   TASYWCYRCNRFVRAWVQD------TISCPYCDGGFVEAIETASSLPAANLHRRFSPSAI 64
           TASYWCY C RFV  W         +++CP+CDGGF+E I  +SS  AA      + + +
Sbjct: 15  TASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSS--AATELTIPASTEV 74

Query: 65  HTLDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSA---DGGDEGGGGGENNSFDIYY 124
            +++ +     R S  R RRR G R +FNPV+VL+G A   + G+EG    +  +F+ YY
Sbjct: 75  RSINNN-----RRSVIR-RRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFEFYY 134

Query: 125 DDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEIN--GFGRSENPPASKAAVESMPTI 184
           DDG+GSGLRP+P ++SE LMG+GF+RLLEQL+Q+E +  G GRS NPPASK+A+ES+P +
Sbjct: 135 DDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRV 194

Query: 185 EILESHVDSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSE 244
           EI + H+ S+++CAVC E FE  TEAREMPCKH++H DCI+PWLS+RNSCPVCR ELPSE
Sbjct: 195 EISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSE 254

Query: 245 RVSPAGGVSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGG--FN 304
                   S+   ++  VG+TIWRLPGGGFAVGRF      GER  P V TEMDGG   N
Sbjct: 255 ----PNRRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGN 314

Query: 305 ANGAPRRVSWASRRSRG---RENRGIG----------RTFRNIFSFFGRL---RSSNSSS 364
           +   PRR+SW   RS G    ++ G G          R  R + S   R+   RSS+SSS
Sbjct: 315 SQDGPRRISWV--RSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRVRPNRSSSSSS 374

[Close]

BLAST of Carg26581 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 8.4e-85
Identity = 180/381 (47.24%), Postives = 241/381 (63.25%), Query Frame = 0


Query: 5   TASYWCYRCNRFVRAWV-QDT---ISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 64
           T SYWCY C RF+  W  QD    + CPYC+GGF+E IE +S+   A +    S   + +
Sbjct: 28  TTSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPA--STPEVRS 87

Query: 65  LDQDPFQSPRLSTRRS---RRRLGDRSTFNPVVVLRGSADGG-------DEGGGG-GENN 124
           +++         T RS   RRR   R++FNPV+VL G   GG       +EG G   E  
Sbjct: 88  VEE---------THRSIIRRRRSNRRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERR 147

Query: 125 SFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEI--NGFGRSENPPASKAAV 184
           +++ YYDDG+GSGLRP+P ++SE LMG+GF+RLLEQL+Q+E   NG GRS NPPASK+A+
Sbjct: 148 AYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAI 207

Query: 185 ESMPTIEILESHVDSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCR 244
           ES+P +EI + H  ++++CAVC E FE G E REMPCKHI+H DCI+PWLS+RNSCPVCR
Sbjct: 208 ESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 267

Query: 245 HELPSERVSPAGGVSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMD 304
            ELPS+ +  +        +E  VG+TIWRLPGGGFAVGRF  G   GER  P V TEMD
Sbjct: 268 FELPSDPIQRSN------EEEHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMD 327

Query: 305 -GGFNANGAPRRVSWA-------SRRSRGRENRG--IGRTFRNIFSFFGRLRSS--NSSS 357
            GG  +N  PRR+SW          R+ GR   G  + R  R + SF  R+R S  +S+S
Sbjct: 328 GGGLGSNEGPRRISWVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSNS 387

[Close]

BLAST of Carg26581 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 4.0e-79
Identity = 189/414 (45.65%), Postives = 244/414 (58.94%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIE-----------TASSLPAANL 60
           MASG  SYWCY C+RFV  WV D+ISCP CDGGF+E I+           T ++      
Sbjct: 1   MASG--SYWCYSCSRFV--WVSDSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRS 60

Query: 61  HRRF--------SPSAIHTLDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGS--ADGG 120
             RF        +PSA    D  P  +P + TR    R     + NPV+VLRGS  A   
Sbjct: 61  PTRFPPPSSSSSTPSASMHADNSP--TPTIVTRTRSNR-----SPNPVIVLRGSAAAPSS 120

Query: 121 DEGGGGGENNSFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEIN---GFGR 180
           D    G + ++F +YYDDG  SGLRP+P +M+EFL+G+GFDRLL+Q++Q+E+N       
Sbjct: 121 DVVSEGLDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRS 180

Query: 181 SENPPASKAAVESMPTIEILESHV--DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCII 240
            E+PPASK+A+E++P IEI  +H+  DS SHCAVCKE F + + AREMPC HIYH DCI+
Sbjct: 181 CEHPPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCIL 240

Query: 241 PWLSMRNSCPVCRHELPSERVSPAGGVSDRVV-------DEETVGLTIWRLPGGGFAVGR 300
           PWL++RNSCPVCRHELP+E ++   G +   V       ++   GLTIWRLPGGGFAVGR
Sbjct: 241 PWLAIRNSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGR 300

Query: 301 FTGGRLTGERDPPAVYTEMDGG-FNANGAPRRVSWASRR-------SRGRENRGIGRTFR 360
             GG   G+R  P VYTE+DGG       PRRV+W SRR       SR R     GR  R
Sbjct: 301 IPGGWRGGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMR 360

Query: 361 NIFSFF----GRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRYLRRPNRTWL 370
            +F  F    G + ++ ++SS + +      R+ S S  S  S   RR  R WL
Sbjct: 361 -LFGCFSGSSGSIAAAAAASSGSGSRIRVTRRTRSFSMFSTASSSSRR--RNWL 400

[Close]

BLAST of Carg26581 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.1e-36
Identity = 92/243 (37.86%), Postives = 134/243 (55.14%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           M+S   ++WC+RC R V    +D + C YC GGFVE I+   S    ++ R   P+    
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAV-CSYCGGGFVEEIDIGPSRAHRDVER--DPTFDLM 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDR---------STFNPVVVLRGSADGGDEGGGGGENNSF 120
                F   RL+ R   R +  R         S   P+++  G A        GG+N+S 
Sbjct: 61  EAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQA---PFRLAGGDNSSV 120

Query: 121 DIYYDDGAGSGLRPVPAT-MSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESM 180
           + +  +GA  G+     T   ++  G G + L+EQL+    +G      PPA K++++++
Sbjct: 121 EAFV-NGAAPGIGIARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDAL 180

Query: 181 PTIEILESHV-DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHE 233
           PTI+I + H+  SDSHC VCK+ FE+ +EA++MPC HIYHSDCI+PWL   NSCPVCR E
Sbjct: 181 PTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKE 232

[Close]

BLAST of Carg26581 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.3e-33
Identity = 117/350 (33.43%), Postives = 160/350 (45.71%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLP--AANLHRRF--SPS 60
           M+S   ++WC+RC R VR   Q+ + C YC GGFVE ++ A + P      HR       
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPV-CFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQ 60

Query: 61  AIHTLDQ-DPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSAD----GGDEGGGGGENNSF 120
               +D    F   RL+ R   R +  R+  +      G A     GG        +N+ 
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 120

Query: 121 DIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMP 180
           +  + +G   G+        ++  G G + L EQL+     G  R   PPA ++A++++P
Sbjct: 121 EALF-NGGSPGIGITRGNTGDYFFGPGLEELFEQLSA----GTTRRGPPPAPRSAIDALP 180

Query: 181 TIEILESHV-DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHEL 240
           TI+I + H+  SDS+C VCK+ FE+G+EA++MPC HIYHSDCI+PWL   NSCPVCR EL
Sbjct: 181 TIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 240

Query: 241 PSERVSPAGGVSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGF 300
           PS     A G S                          +  R T  R+            
Sbjct: 241 PS-----ASGPSS-------------------------SQNRTTPTRN------------ 293

Query: 301 NANGAPRRVSWASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASN 341
                  R S +S  S  REN   G   RN FS F   RSS SSSS   N
Sbjct: 301 ------YRSSSSSSSSNSREN---GNERRNPFSSFWPFRSSGSSSSSTQN 293

[Close]

BLAST of Carg26581 vs. ExPASy TrEMBL
Match: A0A6J1G610 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111451192 PE=4 SV=1)

HSP 1 Score: 766.5 bits (1978), Expect = 5.1e-218
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT
Sbjct: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120
           LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG
Sbjct: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360
           WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY
Sbjct: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360

Query: 361 LRRPNRTWLENHTENGRW 379
           LRRPNRTWLENHTENGRW
Sbjct: 361 LRRPNRTWLENHTENGRW 378

[Close]

BLAST of Carg26581 vs. ExPASy TrEMBL
Match: A0A6J1L6T2 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111499706 PE=4 SV=1)

HSP 1 Score: 762.3 bits (1967), Expect = 9.6e-217
Identity = 376/378 (99.47%), Postives = 376/378 (99.47%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT
Sbjct: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120
           LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG
Sbjct: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAF IGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFVIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANG PRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGVPRRVS 300

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360
           WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY
Sbjct: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360

Query: 361 LRRPNRTWLENHTENGRW 379
           LRRPNRTWLENHTENGRW
Sbjct: 361 LRRPNRTWLENHTENGRW 378

[Close]

BLAST of Carg26581 vs. ExPASy TrEMBL
Match: A0A0A0KE74 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G190250 PE=4 SV=1)

HSP 1 Score: 698.7 bits (1802), Expect = 1.3e-197
Identity = 348/379 (91.82%), Postives = 358/379 (94.46%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           M++GTASYWCYRCNRFVRAW QD+I+CPYCDGGFVEAIETASSLP +NLHRR SPSAIHT
Sbjct: 39  MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPPSNLHRRLSPSAIHT 98

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120
           LDQD FQSPRLSTRRSRRRLGDRSTFNPVVVLRGSAD GD   GGGE NSFDIYYDDGAG
Sbjct: 99  LDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDV-VGGGERNSFDIYYDDGAG 158

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 159 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 218

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIGTEAREMPCKHIYHS+CIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 219 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRHELPSERVSPAGG 278

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRF+GGRL GERDPPAVYTEMDGGFN NG PRRVS
Sbjct: 279 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNGNGVPRRVS 338

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360
           WASRRSRGRE+RGIGRTFRNIFSFFGR RSS+SSSS  SNE+ESVSRSHS SSSSVFSRY
Sbjct: 339 WASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRY 398

Query: 361 LRRPNRTW-LENHTENGRW 379
           LRR NR W LEN  ENGRW
Sbjct: 399 LRRQNRAWVLENQNENGRW 416

[Close]

BLAST of Carg26581 vs. ExPASy TrEMBL
Match: A0A5A7V7N5 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00040 PE=4 SV=1)

HSP 1 Score: 697.2 bits (1798), Expect = 3.8e-197
Identity = 347/379 (91.56%), Postives = 358/379 (94.46%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           M++GTASYWCYRC+RFVRAW QD+I+CPYCDGGFVEAIETASSLPA NLHRR SP+AIHT
Sbjct: 1   MSTGTASYWCYRCSRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPTAIHT 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120
           +DQD FQSPRLSTRRSRRR GDRSTFNPVVVLRGSAD GD   GGGE NSFDIYYDDGAG
Sbjct: 61  VDQDSFQSPRLSTRRSRRRFGDRSTFNPVVVLRGSADAGDV-VGGGERNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRF+GGRL GERDPPAVYTEMDGGFNANG PRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVS 300

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360
           WASRRSRGRE+RGIGRTFRNIFSFFGR RSS+SSSS  SNE+ESVSRSHS SSSSVFSRY
Sbjct: 301 WASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRY 360

Query: 361 LRRPNRTW-LENHTENGRW 379
           LRR NR W LEN  ENGRW
Sbjct: 361 LRRQNRAWVLENQNENGRW 378

[Close]

BLAST of Carg26581 vs. ExPASy TrEMBL
Match: A0A1S3CKQ2 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103502070 PE=4 SV=1)

HSP 1 Score: 697.2 bits (1798), Expect = 3.8e-197
Identity = 347/379 (91.56%), Postives = 358/379 (94.46%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           M++GTASYWCYRC+RFVRAW QD+I+CPYCDGGFVEAIETASSLPA NLHRR SP+AIHT
Sbjct: 1   MSTGTASYWCYRCSRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPTAIHT 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120
           +DQD FQSPRLSTRRSRRR GDRSTFNPVVVLRGSAD GD   GGGE NSFDIYYDDGAG
Sbjct: 61  VDQDSFQSPRLSTRRSRRRFGDRSTFNPVVVLRGSADAGDV-VGGGERNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRF+GGRL GERDPPAVYTEMDGGFNANG PRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVS 300

Query: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360
           WASRRSRGRE+RGIGRTFRNIFSFFGR RSS+SSSS  SNE+ESVSRSHS SSSSVFSRY
Sbjct: 301 WASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRY 360

Query: 361 LRRPNRTW-LENHTENGRW 379
           LRR NR W LEN  ENGRW
Sbjct: 361 LRRQNRAWVLENQNENGRW 378

[Close]

BLAST of Carg26581 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 315.8 bits (808), Expect = 4.6e-86
Identity = 188/394 (47.72%), Postives = 249/394 (63.20%), Query Frame = 0


Query: 5   TASYWCYRCNRFVRAWVQD------TISCPYCDGGFVEAIETASSLPAANLHRRFSPSAI 64
           TASYWCY C RFV  W         +++CP+CDGGF+E I  +SS  AA      + + +
Sbjct: 15  TASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSS--AATELTIPASTEV 74

Query: 65  HTLDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSA---DGGDEGGGGGENNSFDIYY 124
            +++ +     R S  R RRR G R +FNPV+VL+G A   + G+EG    +  +F+ YY
Sbjct: 75  RSINNN-----RRSVIR-RRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFEFYY 134

Query: 125 DDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEIN--GFGRSENPPASKAAVESMPTI 184
           DDG+GSGLRP+P ++SE LMG+GF+RLLEQL+Q+E +  G GRS NPPASK+A+ES+P +
Sbjct: 135 DDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRV 194

Query: 185 EILESHVDSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSE 244
           EI + H+ S+++CAVC E FE  TEAREMPCKH++H DCI+PWLS+RNSCPVCR ELPSE
Sbjct: 195 EISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSE 254

Query: 245 RVSPAGGVSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGG--FN 304
                   S+   ++  VG+TIWRLPGGGFAVGRF      GER  P V TEMDGG   N
Sbjct: 255 ----PNRRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGN 314

Query: 305 ANGAPRRVSWASRRSRG---RENRGIG----------RTFRNIFSFFGRL---RSSNSSS 364
           +   PRR+SW   RS G    ++ G G          R  R + S   R+   RSS+SSS
Sbjct: 315 SQDGPRRISWV--RSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRVRPNRSSSSSS 374

[Close]

BLAST of Carg26581 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 315.5 bits (807), Expect = 5.9e-86
Identity = 180/381 (47.24%), Postives = 241/381 (63.25%), Query Frame = 0


Query: 5   TASYWCYRCNRFVRAWV-QDT---ISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 64
           T SYWCY C RF+  W  QD    + CPYC+GGF+E IE +S+   A +    S   + +
Sbjct: 28  TTSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPA--STPEVRS 87

Query: 65  LDQDPFQSPRLSTRRS---RRRLGDRSTFNPVVVLRGSADGG-------DEGGGG-GENN 124
           +++         T RS   RRR   R++FNPV+VL G   GG       +EG G   E  
Sbjct: 88  VEE---------THRSIIRRRRSNRRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERR 147

Query: 125 SFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEI--NGFGRSENPPASKAAV 184
           +++ YYDDG+GSGLRP+P ++SE LMG+GF+RLLEQL+Q+E   NG GRS NPPASK+A+
Sbjct: 148 AYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAI 207

Query: 185 ESMPTIEILESHVDSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCR 244
           ES+P +EI + H  ++++CAVC E FE G E REMPCKHI+H DCI+PWLS+RNSCPVCR
Sbjct: 208 ESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 267

Query: 245 HELPSERVSPAGGVSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMD 304
            ELPS+ +  +        +E  VG+TIWRLPGGGFAVGRF  G   GER  P V TEMD
Sbjct: 268 FELPSDPIQRSN------EEEHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMD 327

Query: 305 -GGFNANGAPRRVSWA-------SRRSRGRENRG--IGRTFRNIFSFFGRLRSS--NSSS 357
            GG  +N  PRR+SW          R+ GR   G  + R  R + SF  R+R S  +S+S
Sbjct: 328 GGGLGSNEGPRRISWVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSNS 387

[Close]

BLAST of Carg26581 vs. TAIR 10
Match: AT2G39720.1 (RING-H2 finger C2A )

HSP 1 Score: 296.6 bits (758), Expect = 2.9e-80
Identity = 189/414 (45.65%), Postives = 244/414 (58.94%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIE-----------TASSLPAANL 60
           MASG  SYWCY C+RFV  WV D+ISCP CDGGF+E I+           T ++      
Sbjct: 1   MASG--SYWCYSCSRFV--WVSDSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRS 60

Query: 61  HRRF--------SPSAIHTLDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGS--ADGG 120
             RF        +PSA    D  P  +P + TR    R     + NPV+VLRGS  A   
Sbjct: 61  PTRFPPPSSSSSTPSASMHADNSP--TPTIVTRTRSNR-----SPNPVIVLRGSAAAPSS 120

Query: 121 DEGGGGGENNSFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEIN---GFGR 180
           D    G + ++F +YYDDG  SGLRP+P +M+EFL+G+GFDRLL+Q++Q+E+N       
Sbjct: 121 DVVSEGLDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRS 180

Query: 181 SENPPASKAAVESMPTIEILESHV--DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCII 240
            E+PPASK+A+E++P IEI  +H+  DS SHCAVCKE F + + AREMPC HIYH DCI+
Sbjct: 181 CEHPPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCIL 240

Query: 241 PWLSMRNSCPVCRHELPSERVSPAGGVSDRVV-------DEETVGLTIWRLPGGGFAVGR 300
           PWL++RNSCPVCRHELP+E ++   G +   V       ++   GLTIWRLPGGGFAVGR
Sbjct: 241 PWLAIRNSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGR 300

Query: 301 FTGGRLTGERDPPAVYTEMDGG-FNANGAPRRVSWASRR-------SRGRENRGIGRTFR 360
             GG   G+R  P VYTE+DGG       PRRV+W SRR       SR R     GR  R
Sbjct: 301 IPGGWRGGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMR 360

Query: 361 NIFSFF----GRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRYLRRPNRTWL 370
            +F  F    G + ++ ++SS + +      R+ S S  S  S   RR  R WL
Sbjct: 361 -LFGCFSGSSGSIAAAAAASSGSGSRIRVTRRTRSFSMFSTASSSSRR--RNWL 400

[Close]

BLAST of Carg26581 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 155.6 bits (392), Expect = 7.9e-38
Identity = 92/243 (37.86%), Postives = 134/243 (55.14%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           M+S   ++WC+RC R V    +D + C YC GGFVE I+   S    ++ R   P+    
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAV-CSYCGGGFVEEIDIGPSRAHRDVER--DPTFDLM 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDR---------STFNPVVVLRGSADGGDEGGGGGENNSF 120
                F   RL+ R   R +  R         S   P+++  G A        GG+N+S 
Sbjct: 61  EAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQA---PFRLAGGDNSSV 120

Query: 121 DIYYDDGAGSGLRPVPAT-MSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESM 180
           + +  +GA  G+     T   ++  G G + L+EQL+    +G      PPA K++++++
Sbjct: 121 EAFV-NGAAPGIGIARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDAL 180

Query: 181 PTIEILESHV-DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHE 233
           PTI+I + H+  SDSHC VCK+ FE+ +EA++MPC HIYHSDCI+PWL   NSCPVCR E
Sbjct: 181 PTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKE 232

[Close]

BLAST of Carg26581 vs. TAIR 10
Match: AT3G56580.1 (RING/U-box superfamily protein )

HSP 1 Score: 155.6 bits (392), Expect = 7.9e-38
Identity = 92/243 (37.86%), Postives = 134/243 (55.14%), Query Frame = 0


Query: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60
           M+S   ++WC+RC R V    +D + C YC GGFVE I+   S    ++ R   P+    
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAV-CSYCGGGFVEEIDIGPSRAHRDVER--DPTFDLM 60

Query: 61  LDQDPFQSPRLSTRRSRRRLGDR---------STFNPVVVLRGSADGGDEGGGGGENNSF 120
                F   RL+ R   R +  R         S   P+++  G A        GG+N+S 
Sbjct: 61  EAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQA---PFRLAGGDNSSV 120

Query: 121 DIYYDDGAGSGLRPVPAT-MSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESM 180
           + +  +GA  G+     T   ++  G G + L+EQL+    +G      PPA K++++++
Sbjct: 121 EAFV-NGAAPGIGIARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDAL 180

Query: 181 PTIEILESHV-DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHE 233
           PTI+I + H+  SDSHC VCK+ FE+ +EA++MPC HIYHSDCI+PWL   NSCPVCR E
Sbjct: 181 PTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKE 232

The following BLAST results are available for this feature:

BLAST of Carg26581 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947282.1	1.0e-217	100.00	E3 ubiquitin-protein ligase RDUF2-like [Cucurbita moschata] >KAG6605446.1 E3 ubi...	[more]
XP_023532253.1	3.0e-217	99.74	E3 ubiquitin-protein ligase RDUF2-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007108.1	2.0e-216	99.47	E3 ubiquitin-protein ligase RDUF2-like [Cucurbita maxima]	[more]
XP_038902866.1	1.1e-198	92.88	E3 ubiquitin-protein ligase RDUF1 [Benincasa hispida]	[more]
XP_004143127.2	2.7e-197	91.82	E3 ubiquitin-protein ligase RDUF1, partial [Cucumis sativus]	[more]

BLAST of Carg26581 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940T5	6.4e-85	47.72	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
Q9SNB6	8.4e-85	47.24	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
O22283	4.0e-79	45.65	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q94AK4	1.1e-36	37.86	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
O22197	3.3e-33	33.43	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]

BLAST of Carg26581 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G610	5.1e-218	100.00	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111451192...	[more]
A0A6J1L6T2	9.6e-217	99.47	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111499706 P...	[more]
A0A0A0KE74	1.3e-197	91.82	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G190250 PE...	[more]
A0A5A7V7N5	3.8e-197	91.56	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CKQ2	3.8e-197	91.56	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103502070 PE=4 ...	[more]

BLAST of Carg26581 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59550.1	4.6e-86	47.72	zinc finger (C3HC4-type RING finger) family protein	[more]
AT3G46620.1	5.9e-86	47.24	zinc finger (C3HC4-type RING finger) family protein	[more]
AT2G39720.1	2.9e-80	45.65	RING-H2 finger C2A	[more]
AT3G56580.2	7.9e-38	37.86	RING/U-box superfamily protein	[more]
AT3G56580.1	7.9e-38	37.86	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 186..226 e-value: 3.0E-7 score: 40.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 185..227 e-value: 1.2E-10 score: 41.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 186..227 score: 12.135206
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 7..38 e-value: 1.4E-13 score: 50.9
IPR010543	Domain of unknown function DUF1117	PFAM	PF06547	DUF1117	coord: 251..362 e-value: 1.6E-40 score: 138.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 152..233 e-value: 2.2E-21 score: 77.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..349
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 5..315
None	No IPR available	PANTHER	PTHR15710:SF24	OS05G0110000 PROTEIN	coord: 5..315
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 186..227 e-value: 2.85362E-24 score: 91.9956
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 166..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26581-RA	Carg26581-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0046873	metal ion transmembrane transporter activity
molecular_function	GO:0061630	ubiquitin protein ligase activity