Carg26511 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCAAAAACCCTAAAATAATTTCCCTCTTTTCAATTCATTCCTTTCTTTTTGCTCTCCACTCCTTTTTTTTTTCTTCTTCTCCACTTCCTTCCCTCCTTCCTTCCTTCCTTCTCAGATCCAACATTCCGCCCTTTCTTCTTCTCCAGGTGAGCATCTTACTCCCCCTCACTCAAATTTCCCCCTTATTTCTTCCTTTTCCTTTCCGATTTCGTCTTGATTCTGTTGATCCGATCTTTCTTGCTCTTTTCTTCTTCTTTTCCTTTGTTTTGGTGGATAATTCTTTGATCAAGATTTTGAAACGTTACCGGTGGATAATTCTTGCCCTTTGTGTTTGATTTTGTTTTTCCTGCTCTTAATTCTCTCTCTTTATCCATTTTCTTTGTCATTCATGGTTGTTGATTGCAGCTTGGACTTGTGGAACCGCCTCTCTGATCATTTCCGGGTAAATTCGACTACTTAAAAGAGGGTTTTCTTGTTTAAAGTTCGAGCTCTGGGTCTCATGAGAATTTTTAGGGGAATGCAGAAATCGTTTTGCAAGGAGCAGAAGGAGCTGGGCTGGAAGAATATATTCTGCCGAGGGTTGGGTGTCACTGCTCCCAAGGCAAGAACTCGTGATAAACCCATGCTTATTACTGCCTTCTTGACTCTCTGA GCAAAAACCCTAAAATAATTTCCCTCTTTTCAATTCATTCCTTTCTTTTTGCTCTCCACTCCTTTTTTTTTTCTTCTTCTCCACTTCCTTCCCTCCTTCCTTCCTTCCTTCTCAGATCCAACATTCCGCCCTTTCTTCTTCTCCAGGTGAGCATCTTACTCCCCCTCACTCAAATTTCCCCCTTATTTCTTCCTTTTCCTTTCCGATTTCGTCTTGATTCTGTTGATCCGATCTTTCTTGCTCTTTTCTTCTTCTTTTCCTTTGTTTTGGTGGATAATTCTTTGATCAAGATTTTGAAACGTTACCGGTGGATAATTCTTGCCCTTTGTGTTTGATTTTGTTTTTCCTGCTCTTAATTCTCTCTCTTTATCCATTTTCTTTGTCATTCATGGTTGTTGATTGCAGCTTGGACTTGTGGAACCGCCTCTCTGATCATTTCCGGAAATCGTTTTGCAAGGAGCAGAAGGAGCTGGGCTGGAAGAATATATTCTGCCGAGGGTTGGGTGTCACTGCTCCCAAGGCAAGAACTCGTGATAAACCCATGCTTATTACTGCCTTCTTGACTCTCTGA ATGGTTGTTGATTGCAGCTTGGACTTGTGGAACCGCCTCTCTGATCATTTCCGGAAATCGTTTTGCAAGGAGCAGAAGGAGCTGGGCTGGAAGAATATATTCTGCCGAGGGTTGGGTGTCACTGCTCCCAAGGCAAGAACTCGTGATAAACCCATGCTTATTACTGCCTTCTTGACTCTCTGA MVVDCSLDLWNRLSDHFRKSFCKEQKELGWKNIFCRGLGVTAPKARTRDKPMLITAFLTL Homology
BLAST of Carg26511 vs. NCBI nr
Match: KAG7019361.1 (hypothetical protein SDJN02_18321 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 131.7 bits (330), Expect = 2.1e-27 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of Carg26511 vs. NCBI nr
Match: KAG6583714.1 (hypothetical protein SDJN03_19646, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 120.6 bits (301), Expect = 4.8e-24 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of Carg26511 vs. NCBI nr
Match: KAE8652815.1 (hypothetical protein Csa_023994, partial [Cucumis sativus]) HSP 1 Score: 96.3 bits (238), Expect = 9.7e-17 Identity = 48/56 (85.71%), Postives = 49/56 (87.50%), Query Frame = 0
BLAST of Carg26511 vs. NCBI nr
Match: TKR98526.1 (Casparian strip membrane protein [Populus alba]) HSP 1 Score: 58.9 bits (141), Expect = 1.7e-05 Identity = 31/54 (57.41%), Postives = 34/54 (62.96%), Query Frame = 0
BLAST of Carg26511 vs. NCBI nr
Match: KAF5470938.1 (hypothetical protein F2P56_011422, partial [Juglans regia]) HSP 1 Score: 57.8 bits (138), Expect = 3.8e-05 Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = 0
BLAST of Carg26511 vs. ExPASy TrEMBL
Match: A0A4U5PQ38 (CASP-like protein OS=Populus alba OX=43335 GN=D5086_0000202630 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 8.3e-06 Identity = 31/54 (57.41%), Postives = 34/54 (62.96%), Query Frame = 0
BLAST of Carg26511 vs. ExPASy TrEMBL
Match: A0A6J5V571 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS37768 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.5e-04 Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0
BLAST of Carg26511 vs. ExPASy TrEMBL
Match: A0A7J8QTS9 (Uncharacterized protein OS=Gossypium davidsonii OX=34287 GN=Godav_017523 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.5e-04 Identity = 25/47 (53.19%), Postives = 30/47 (63.83%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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