Carg26456 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg26456
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncopper-transporting ATPase PAA1, chloroplastic-like
LocationCarg_Chr11: 9631332 .. 9633115 (+)
RNA-Seq ExpressionCarg26456
SyntenyCarg26456
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCCTTACTCTCTTTAATGGCGTCCAATGCGCCTCTCTTCTCTTCTCCCCCCATCACTCTCAGCTTCTCCAGACCCAATTTCACCCACCCCACCTTCATTTCCCCTTTCTCTGTTACCTCTTCTTTCTCGCTGCGCACTGCTGCTCCGCCCATCCACCGTCCTTCCAAATTCATCCCGATCTCTGCTTCTGGCAATGGTAATGACGGTGTTCGTGGAGACGGCGGCGGTGGCGATGACGACTCGAAATTGCTTGATGGAGAAGCTGAGGATAATGCGACGCTGTCCGCGGATGCGATCGTTCTGGATGTTGGAGTGCGAGATAGTTCTCTCCCTTTTCAGTTTTCGATTGGTGCTAATTTTGATGGATTCTGTGCTGTTTGTAATAGGGGATGATGTGCACGGGGTGTTCCACGAGTGTCAAGAGGATTCTTGAAAGTCAGGTGGTTATATACTTATAGTCTCTTCTTATCTGTTTTACGTACTCTTTGGTGATCGTTACTTATCCTTAAATACTTGAGTTGCTGATTGAACTGAGCATGTAGGAACTCTGTACGAGTTTATTGTTTGATTGATATCTAAGAATCAGAGATTGAAGAGGGATGGGAACAGGGTATAATAGCATTTTCAGTATATAATTGAATTGTTTCAGATTTCTAGTTGGACTTGTATAATCTAACAGAGTAATTGAATTTAGGCATAATCTACGGGGAATCATGAACCTCCACAATGGTATGATATTGTCCACTTTGAGTATAAGCTCTCATCGGTTTGCTTTTGGTTTCTCCGAAAGCTCTCGTGCCAATGGAGATGTACTCTTAATTAGCCAACGTGGGACTCCCTCCCAACAATCCTCCCTTCGAGCAAAGTACACCATAGAGTCTCCTTTGAGGCCTATGGAGCCCTCGAACAGCCTCCCCTTAATCGAGGATTGACTACTTTCTCTAGAGCCCTCGAACTAAGTACACCATTTGTTTGACACTTGAGTCACTTTTGATTACACCTCCGAGGCTCACCACTTCTTTGTTCAAAATTTGAGGATTCTATTGACCTGACTAAGTTAAGGGCATAACTCTGATACCATGTTAGAAACTACGGAATCAAGTTGTAATTGTATGAGCTCAATAGGGTACCATTTGTAACATGACTCTAATACCATATTAGGAATCACAAACCTCCACAATGGTATGATATTGTCAACTTTGAGCATAAGCTCTCCTGGTTTTGCTTTTGGTTTCCACAAAAGGCCTCATACCAATGGAGATAGTGTTCCTTATAAACCCCATGATCTTCCTCTTAATTAGTCAATGTGGGGACTACTCTTTTCAATAATCCTCAACAATTGTTGAGAATTGTTGGGAGAGGAGTCCCGCATCGGCTGGGTGATCATGAGTTTATAAGTAAGGAACACTATCTCCATTGGTATGAGGCCTTTTGGGGAAACCAACAACAAAGCCATAAGAGTTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGGGTCGTAGTTCGTAACAACATTGGAGTTTTACACGCTTTAGTATGATATTAAAGCTAGACATACCACTGAAAATTTCATTTCTTTCCCGATTAATATTGATCATTTGTTATCATGGACAGCCGCCAGTATCGCATGCTACTGTTGACCTTGCTTCAGAGACAGCATTCGTGTGGCTTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAGGAGCTGGGGGAGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCTAAGGCTCAAGGTTAG

mRNA sequence

ATGGATTCCTTACTCTCTTTAATGGCGTCCAATGCGCCTCTCTTCTCTTCTCCCCCCATCACTCTCAGCTTCTCCAGACCCAATTTCACCCACCCCACCTTCATTTCCCCTTTCTCTGTTACCTCTTCTTTCTCGCTGCGCACTGCTGCTCCGCCCATCCACCGTCCTTCCAAATTCATCCCGATCTCTGCTTCTGGCAATGGTAATGACGGTGTTCGTGGAGACGGCGGCGGTGGCGATGACGACTCGAAATTGCTTGATGGAGAAGCTGAGGATAATGCGACGCTGTCCGCGGATGCGATCGTTCTGGATGTTGGAGGGATGATGTGCACGGGGTGTTCCACGAGTGTCAAGAGGATTCTTGAAAGTCAGCCGCCAGTATCGCATGCTACTGTTGACCTTGCTTCAGAGACAGCATTCGTGTGGCTTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAGGAGCTGGGGGAGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCTAAGGCTCAAGGTTAG

Coding sequence (CDS)

ATGGATTCCTTACTCTCTTTAATGGCGTCCAATGCGCCTCTCTTCTCTTCTCCCCCCATCACTCTCAGCTTCTCCAGACCCAATTTCACCCACCCCACCTTCATTTCCCCTTTCTCTGTTACCTCTTCTTTCTCGCTGCGCACTGCTGCTCCGCCCATCCACCGTCCTTCCAAATTCATCCCGATCTCTGCTTCTGGCAATGGTAATGACGGTGTTCGTGGAGACGGCGGCGGTGGCGATGACGACTCGAAATTGCTTGATGGAGAAGCTGAGGATAATGCGACGCTGTCCGCGGATGCGATCGTTCTGGATGTTGGAGGGATGATGTGCACGGGGTGTTCCACGAGTGTCAAGAGGATTCTTGAAAGTCAGCCGCCAGTATCGCATGCTACTGTTGACCTTGCTTCAGAGACAGCATTCGTGTGGCTTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAGGAGCTGGGGGAGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCTAAGGCTCAAGGTTAG

Protein sequence

MDSLLSLMASNAPLFSSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFIPISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG
Homology
[Close]
BLAST of Carg26456 vs. NCBI nr
Match: KAG7022542.1 (Copper-transporting ATPase PAA1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 342.4 bits (877), Expect = 2.3e-90
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 

Query: 1   MDSLLSLMASNAPLFSSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDSLLSLMASNAPLFSSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI
Sbjct: 1   MDSLLSLMASNAPLFSSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60

Query: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI 120
           PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI
Sbjct: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI 120

Query: 121 LESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG 177
           LESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG
Sbjct: 121 LESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG 176

[Close]
BLAST of Carg26456 vs. NCBI nr
Match: KAG6588770.1 (Copper-transporting ATPase PAA1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 340.9 bits (873), Expect = 6.6e-90
Identity = 174/176 (98.86%), Postives = 176/176 (100.00%), Query Frame = 0 

Query: 1   MDSLLSLMASNAPLFSSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDSLLSLMASNAPLF+SPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI
Sbjct: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60

Query: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI 120
           PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI
Sbjct: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI 120

Query: 121 LESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG 177
           LESQPPVSHATVDLASETAFVWLVAEAK+TPNWREELGEALAKHLTTCGFSSKAQG
Sbjct: 121 LESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCGFSSKAQG 176

[Close]
BLAST of Carg26456 vs. NCBI nr
Match: XP_022988963.1 (copper-transporting ATPase PAA1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 338.2 bits (866), Expect = 4.3e-89
Identity = 173/176 (98.30%), Postives = 175/176 (99.43%), Query Frame = 0 

Query: 1   MDSLLSLMASNAPLFSSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDSLLSLMASNAPLF+SPPITLSFSRPNFTHPTFISPF+VTSSFSLRTAAPPIHRPSKFI
Sbjct: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFTVTSSFSLRTAAPPIHRPSKFI 60

Query: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI 120
           PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI
Sbjct: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI 120

Query: 121 LESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG 177
           LESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKA G
Sbjct: 121 LESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAHG 176

[Close]
BLAST of Carg26456 vs. NCBI nr
Match: XP_022927930.1 (copper-transporting ATPase PAA1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 335.1 bits (858), Expect = 3.6e-88
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0 

Query: 1   MDSLLSLMASNAPLFSSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDSLLSLMASNAPLF+SPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI
Sbjct: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60

Query: 61  PISASGNGNDGVRGDGGGGDDDSKLLDG-EAEDNATLSADAIVLDVGGMMCTGCSTSVKR 120
           PISASGNGNDGVRGDGGGGDDDSKLLDG EAEDNATLSAD IVLDVGGMMCTGCSTSVKR
Sbjct: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEEAEDNATLSADVIVLDVGGMMCTGCSTSVKR 120

Query: 121 ILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG 177
           ILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG
Sbjct: 121 ILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG 177

[Close]
BLAST of Carg26456 vs. NCBI nr
Match: XP_023529553.1 (copper-transporting ATPase PAA1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.8 bits (839), Expect = 5.8e-86
Identity = 171/178 (96.07%), Postives = 173/178 (97.19%), Query Frame = 0 

Query: 1   MDSLLSLMASNAPLFSSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDSLLSLMASNAPLF+SP ITLSFSRPNFTHPTFISPFSVTS FSLRTAAPPIHRPSKFI
Sbjct: 1   MDSLLSLMASNAPLFTSPTITLSFSRPNFTHPTFISPFSVTSPFSLRTAAPPIHRPSKFI 60

Query: 61  PISASGNGNDGVRGD--GGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVK 120
           PISASGN NDGVRGD  GGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVK
Sbjct: 61  PISASGNSNDGVRGDGGGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVK 120

Query: 121 RILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG 177
           +ILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG
Sbjct: 121 KILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG 178

[Close]
BLAST of Carg26456 vs. ExPASy Swiss-Prot
Match: Q9SZC9 (Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAA1 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.5e-24
Identity = 62/114 (54.39%), Postives = 75/114 (65.79%), Query Frame = 0 

Query: 63  SASGNGNDGVRGDGGG----GDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVK 122
           S  G  N G  G GGG    GD  SKL    ++  +  S+D I+LDVGGM C GCS SVK
Sbjct: 108 SGFGGYNGGSGGGGGGGSESGDSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVK 167

Query: 123 RILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSS 173
           +ILESQP V+ A+V+L +ETA VW V EAK  P+W++ LGE LA HLT CGF S
Sbjct: 168 KILESQPQVASASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]
BLAST of Carg26456 vs. ExPASy Swiss-Prot
Match: B9DFX7 (Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAA2 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.6e-07
Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = 0 

Query: 87  DGEAEDNATLSADA-IVLDVGGMMCTGCSTSVKRILESQPPVSHATVDLASETAFVWLVA 146
           +   E   ++++D  I+LDV GMMC GC   VK +L S   V+ A V++ +ETA V    
Sbjct: 63  ESSIESVKSITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKP 122

Query: 147 EAKITPNWREELGEALAKHLTTCGFSSK 174
           E ++T     +  E+LAK LT  GF +K
Sbjct: 123 EVEVT----ADTAESLAKRLTESGFEAK 146

[Close]
BLAST of Carg26456 vs. ExPASy TrEMBL
Match: A0A6J1JNV4 (copper-transporting ATPase PAA1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486165 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.1e-89
Identity = 173/176 (98.30%), Postives = 175/176 (99.43%), Query Frame = 0 

Query: 1   MDSLLSLMASNAPLFSSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDSLLSLMASNAPLF+SPPITLSFSRPNFTHPTFISPF+VTSSFSLRTAAPPIHRPSKFI
Sbjct: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFTVTSSFSLRTAAPPIHRPSKFI 60

Query: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI 120
           PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI
Sbjct: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI 120

Query: 121 LESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG 177
           LESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKA G
Sbjct: 121 LESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAHG 176

[Close]
BLAST of Carg26456 vs. ExPASy TrEMBL
Match: A0A6J1EQ92 (copper-transporting ATPase PAA1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111434685 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.8e-88
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0 

Query: 1   MDSLLSLMASNAPLFSSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDSLLSLMASNAPLF+SPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI
Sbjct: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60

Query: 61  PISASGNGNDGVRGDGGGGDDDSKLLDG-EAEDNATLSADAIVLDVGGMMCTGCSTSVKR 120
           PISASGNGNDGVRGDGGGGDDDSKLLDG EAEDNATLSAD IVLDVGGMMCTGCSTSVKR
Sbjct: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEEAEDNATLSADVIVLDVGGMMCTGCSTSVKR 120

Query: 121 ILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG 177
           ILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG
Sbjct: 121 ILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG 177

[Close]
BLAST of Carg26456 vs. ExPASy TrEMBL
Match: A0A6J1HX97 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467071 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.5e-58
Identity = 136/187 (72.73%), Postives = 144/187 (77.01%), Query Frame = 0 

Query: 1   MDSLLSLMASNAPLFSSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDS LS+MASNAPLF+   IT SFS  NFTH   ISP S T SFSLR A PP+HR  KFI
Sbjct: 1   MDSALSVMASNAPLFALSTITRSFSTLNFTHSPSISPIS-TLSFSLRAAVPPLHRRHKFI 60

Query: 61  PISASGNGNDGVRGD---GGGGDD--------DSKLLDGEAEDNATLSADAIVLDVGGMM 120
             S+SGNGN GVRG+   GGGGDD         S LL GEAED+ATLSADAIVL VGGM 
Sbjct: 61  SNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLSGEAEDDATLSADAIVLGVGGMT 120

Query: 121 CTGCSTSVKRILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCG 177
           C GCS SVKRILESQP VS+A+VDLASETA VW  AEAKITPNWREELGEALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSYASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

[Close]
BLAST of Carg26456 vs. ExPASy TrEMBL
Match: A0A6J1HV12 (copper-transporting ATPase PAA1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467071 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.5e-58
Identity = 136/187 (72.73%), Postives = 144/187 (77.01%), Query Frame = 0 

Query: 1   MDSLLSLMASNAPLFSSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDS LS+MASNAPLF+   IT SFS  NFTH   ISP S T SFSLR A PP+HR  KFI
Sbjct: 1   MDSALSVMASNAPLFALSTITRSFSTLNFTHSPSISPIS-TLSFSLRAAVPPLHRRHKFI 60

Query: 61  PISASGNGNDGVRGD---GGGGDD--------DSKLLDGEAEDNATLSADAIVLDVGGMM 120
             S+SGNGN GVRG+   GGGGDD         S LL GEAED+ATLSADAIVL VGGM 
Sbjct: 61  SNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLSGEAEDDATLSADAIVLGVGGMT 120

Query: 121 CTGCSTSVKRILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCG 177
           C GCS SVKRILESQP VS+A+VDLASETA VW  AEAKITPNWREELGEALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSYASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

[Close]
BLAST of Carg26456 vs. ExPASy TrEMBL
Match: A0A6J1HFH1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463827 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.2e-58
Identity = 136/187 (72.73%), Postives = 143/187 (76.47%), Query Frame = 0 

Query: 1   MDSLLSLMASNAPLFSSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDS LS+MASNAPLF+   IT SFS  NFTH   ISP S T SFSLR A PP+HR  KFI
Sbjct: 1   MDSALSVMASNAPLFTLSTITRSFSTLNFTHSLSISPIS-TLSFSLRAAVPPLHRRHKFI 60

Query: 61  PISASGNGNDGVRGD---GGGGDD--------DSKLLDGEAEDNATLSADAIVLDVGGMM 120
             S+SGNGN GVRG+   GGGGDD         S LL GEAED+A LSADAIVL VGGM 
Sbjct: 61  SNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLAGEAEDDAALSADAIVLGVGGMT 120

Query: 121 CTGCSTSVKRILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCG 177
           C GCS SVKRILESQP VSHA+VDLASETA VW  AEAKITPNWREELGEALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

[Close]
BLAST of Carg26456 vs. TAIR 10
Match: AT4G33520.1 (P-type ATP-ase 1 )

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25
Identity = 63/118 (53.39%), Postives = 77/118 (65.25%), Query Frame = 0 

Query: 63  SASGNGNDGVRGDGGG----GDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVK 122
           S  G  N G  G GGG    GD  SKL    ++  +  S+D I+LDVGGM C GCS SVK
Sbjct: 108 SGFGGYNGGSGGGGGGGSESGDSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVK 167

Query: 123 RILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG 177
           +ILESQP V+ A+V+L +ETA VW V EAK  P+W++ LGE LA HLT CGF S  +G
Sbjct: 168 KILESQPQVASASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQSTPRG 225

[Close]
BLAST of Carg26456 vs. TAIR 10
Match: AT4G33520.2 (P-type ATP-ase 1 )

HSP 1 Score: 111.7 bits (278), Expect = 6.1e-25
Identity = 62/114 (54.39%), Postives = 75/114 (65.79%), Query Frame = 0 

Query: 63  SASGNGNDGVRGDGGG----GDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVK 122
           S  G  N G  G GGG    GD  SKL    ++  +  S+D I+LDVGGM C GCS SVK
Sbjct: 108 SGFGGYNGGSGGGGGGGSESGDSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVK 167

Query: 123 RILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSS 173
           +ILESQP V+ A+V+L +ETA VW V EAK  P+W++ LGE LA HLT CGF S
Sbjct: 168 KILESQPQVASASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]
BLAST of Carg26456 vs. TAIR 10
Match: AT4G33520.3 (P-type ATP-ase 1 )

HSP 1 Score: 111.7 bits (278), Expect = 6.1e-25
Identity = 62/114 (54.39%), Postives = 75/114 (65.79%), Query Frame = 0 

Query: 63  SASGNGNDGVRGDGGG----GDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVK 122
           S  G  N G  G GGG    GD  SKL    ++  +  S+D I+LDVGGM C GCS SVK
Sbjct: 108 SGFGGYNGGSGGGGGGGSESGDSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVK 167

Query: 123 RILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSS 173
           +ILESQP V+ A+V+L +ETA VW V EAK  P+W++ LGE LA HLT CGF S
Sbjct: 168 KILESQPQVASASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]
BLAST of Carg26456 vs. TAIR 10
Match: AT5G21930.1 (P-type ATPase of Arabidopsis 2 )

HSP 1 Score: 55.8 bits (133), Expect = 4.0e-08
Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = 0 

Query: 87  DGEAEDNATLSADA-IVLDVGGMMCTGCSTSVKRILESQPPVSHATVDLASETAFVWLVA 146
           +   E   ++++D  I+LDV GMMC GC   VK +L S   V+ A V++ +ETA V    
Sbjct: 63  ESSIESVKSITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKP 122

Query: 147 EAKITPNWREELGEALAKHLTTCGFSSK 174
           E ++T     +  E+LAK LT  GF +K
Sbjct: 123 EVEVT----ADTAESLAKRLTESGFEAK 146

[Close]
BLAST of Carg26456 vs. TAIR 10
Match: AT5G21930.2 (P-type ATPase of Arabidopsis 2 )

HSP 1 Score: 55.8 bits (133), Expect = 4.0e-08
Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = 0 

Query: 87  DGEAEDNATLSADA-IVLDVGGMMCTGCSTSVKRILESQPPVSHATVDLASETAFVWLVA 146
           +   E   ++++D  I+LDV GMMC GC   VK +L S   V+ A V++ +ETA V    
Sbjct: 63  ESSIESVKSITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKP 122

Query: 147 EAKITPNWREELGEALAKHLTTCGFSSK 174
           E ++T     +  E+LAK LT  GF +K
Sbjct: 123 EVEVT----ADTAESLAKRLTESGFEAK 146

The following BLAST results are available for this feature:
BLAST of Carg26456 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7022542.12.3e-90100.00Copper-transporting ATPase PAA1, chloroplastic, partial [Cucurbita argyrosperma ... [more]
KAG6588770.16.6e-9098.86Copper-transporting ATPase PAA1, chloroplastic, partial [Cucurbita argyrosperma ... [more]
XP_022988963.14.3e-8998.30copper-transporting ATPase PAA1, chloroplastic-like [Cucurbita maxima][more]
XP_022927930.13.6e-8898.31copper-transporting ATPase PAA1, chloroplastic-like [Cucurbita moschata][more]
XP_023529553.15.8e-8696.07copper-transporting ATPase PAA1, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
BLAST of Carg26456 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZC98.5e-2454.39Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana OX=3702 G... [more]
B9DFX75.6e-0738.64Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana OX=3702 G... [more]
BLAST of Carg26456 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JNV42.1e-8998.30copper-transporting ATPase PAA1, chloroplastic-like OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1EQ921.8e-8898.31copper-transporting ATPase PAA1, chloroplastic-like OS=Cucurbita moschata OX=366... [more]
A0A6J1HX972.5e-5872.73copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita maxi... [more]
A0A6J1HV122.5e-5872.73copper-transporting ATPase PAA1, chloroplastic-like isoform X2 OS=Cucurbita maxi... [more]
A0A6J1HFH13.2e-5872.73copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita mosc... [more]
BLAST of Carg26456 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G33520.12.1e-2553.39P-type ATP-ase 1 [more]
AT4G33520.26.1e-2554.39P-type ATP-ase 1 [more]
AT4G33520.36.1e-2554.39P-type ATP-ase 1 [more]
AT5G21930.14.0e-0838.64P-type ATPase of Arabidopsis 2 [more]
AT5G21930.24.0e-0838.64P-type ATPase of Arabidopsis 2 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.100coord: 98..174
e-value: 3.6E-14
score: 55.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..86
NoneNo IPR availablePANTHERPTHR43520:SF22COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTICcoord: 86..173
NoneNo IPR availablePANTHERPTHR43520ATP7, ISOFORM Bcoord: 86..173
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 102..162
e-value: 8.1E-8
score: 32.6
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 100..174
score: 13.635805
IPR006121Heavy metal-associated domain, HMACDDcd00371HMAcoord: 102..163
e-value: 7.67421E-11
score: 53.3785
IPR017969Heavy-metal-associated, conserved sitePROSITEPS01047HMA_1coord: 105..134
IPR036163Heavy metal-associated domain superfamilySUPERFAMILY55008HMA, heavy metal-associated domaincoord: 101..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26456-RACarg26456-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055070 copper ion homeostasis
cellular_component GO:0016020 membrane
molecular_function GO:0005507 copper ion binding
molecular_function GO:0043682 P-type divalent copper transporter activity
molecular_function GO:0046872 metal ion binding