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Carg26426 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTCTTCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCATTTTTAATATCTGATCTGAACTGCAAACCAGTTTCGATTCGGTTCTCTTAGATTTCGGGGTTGGTAATCGGAGAACATCATGCGCCGGGAAGTGGTATTGCCGTTGTTCGTGCTCTGTTTCTTCGCCGCAGATCTTGTTCGAACTGGCCATTCAATCTGGTTGAACTTACCTGCATCTGGAACCAAGTGCGTCTCCGAGGAAATCCAGACCAACGTTGTTGTTCTTGCCGATTTTGTCGTTGTCGCTGATCATACTCATGCTCCCACCATTTCTGTCAAGGTTAAATTTCGAGATTAAACCTTTTTTCTTCTTTGATTCTTCGTTCGCCAATGTCTCTTTTATCTGTGCCTTGGTGGTATTGTTTTTGATTTGAATTCCTCGGTTTGTTAATTTGTTAGGCTGTATCAAAATCGATAGGCTTTATTTGTTGATTTGTCCTCTCCCGTTTGGTTATGACCGATCAATTTCGAAATTCCTAGAACTTCGATCTATTTCTTGTGAGTCTTGTCCTTTGTCTCTAATCTTGGAGATCAAATTTCATGTTGTCATTGATGAATCAACGGGACCAAGGGATTTTTCCGGCTGTGTTGGTTTCATAAATCCAGTGCGCCAATGGAAGTGTCCTTGTTTCTCTGGCTTGTTGCTCAAGGGAACTAAAGTCTGATGTTCTCACAACGCTTTAGGCATATCTTAGCAGGGAGATGAAAGAAAGGCATCAATTCTATGATAGCCTCTTCTTCACTATTATGGAGTTTTTTCATCCAACTTTAGTTTGTTTGGTTTCTGAGTTTGTCTGTGAAGATTATCTCAACAGGTTTAGAGGAACATAGGGTGTGGATTAGTTTTAAGGGGATGGTACCTTTGAAATCTGCTGCACACCCACAAATGATTTGGTTTTTGCAAATTGTTTTAAATTCTTGTTCAGAAGTCACATATATGACTTCTTGTCTAATGATTGTTTGGGAGGATGATTCATGGGGAAGGTGATCAAAAAGTTGAATCTGGAATTGTTTTAGTATCAAAACTTGACTAGTCTATATATTATTGACACTGACAGATCTTCATTTAAAATTCGATTTGAGTCTCTAGATGATAGATTTTGTCCATTTCTTTAGTAGATTCCATTGAAGGGTTGTATTTTGACCTCTGAATTTGTGATGGAGAATGAAACACCATTTATAAGGGAGTGGAAACCTTTCCCTAGCAGACGCATTTTAAAGCCTTGAGGGGAAGTCCGAAAGGGAAAGCACAAAGAAGACAATATCTACTAGCAGTGGATCTGGGACGTTACAAATGGTATCAGAGCCTGACTGTGTCAGCTTTCTCGCTGTTCCCCGAAAGGGGGTAGACACGAGGCGGTGTGCCAGTAAGGACGCTGGGCCCCAAAGGGGAGTGGATTTGGTGGAGGTCACACATCGAATTGGAGAAAGGAACGAGTGCCAGAGAGGACGCTGGGCCCCGAAGAGGGGTGGATTGTGATCTCCCACATTGGTTGGGGAGGAGAACAAAACACCCTTTATAAGGGAGTGGAAACCTTCCCCTAGCAGACGCATTTTAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCTCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGACGTTACAGAATTCCTGTTGGACATTTTTGAGTGATGATCTCTCTTGAAAAATAAGCTTATCTACTCATATGATACATGTTATTTCTTGGCTTTTTTCTTACTAATTAATCTAAGACTCGAACAATTCTTATGAAAGTTTAGACTTAGCAGTGCGTCAGGCCATTTGATATGTACTACTGATAAATCCACCGTTCATGGATTGTTGTAAACAACCAGGAGAACTGCACTATATGTTTTAGGATGTTTAGCTGAATCCATTGGTTGTGCCTCCTTTTAAGTAATTTATATCTGTCATTTGGTGGTGAAACGGTTTGTCGATTCAATGATGTCGAACATGTTTGAATCTGTGATCTGATTATGATTCCGTAACTTTCAACGCTAGATTAATAATCACATACAGATTCGGTGCAAATCGATGTTTATTCTGTGTGTGTGGAAAAGTTTTCCTTTTAAGTTTTGAAGGCCAGATTCCTTAATGTCTTAATTATATGTTATTGTTTTGCACTTTACTGATTGATGACAGTCTCCTTCAGGTGACATCTCCATACGGTAACAATCTTCATCACTCGGAGAACATAACGCACGGTCAGTTTGCGTTTACGACGAGTGAGGGTGGTAATTACCTAGCCTGTTTCTGGCTGACTGACCACAAGCATGAAGCTGGTACTGAGGTAAGTGTCAACCTTGACTGGAGAACAGGGATTGCAGCCAAGGATTGGGAATCAGTCGCAAAAAAAGAGAAGATTGAGGTAACTAACTACTTCCTCCACTTTTCCATATTCCACTACAACTTGTAATATCCATTCGAATCAAACTCGTTCTTGTTTAGGGTGTTGAACTCGAGCTGAGGAAACTCGAGGGAGCTGTCGAAGCTATCCATGAAAATCTGCTCTATCTCAGGGACAGGTAACTAAGTTTCCATTATAGAACTGAATGCTTACCTAAATCTAGACAATGTCCACAACCTTCTCCAACTCATTACTCTGGTTTATATAATTTTGGAGTCTTGCAGAGAAGCTATCATGAGGACGGTCAGCGAGAGAACGAACGCACGAGTTGCGTGGTATAGTATCATGTCCTTGGGTGTCTGCATCATTGCTTCTACTCTACAGATATGGTACTTGAAGCGCTTCTTTCAGAAGAAAAAGCTTATTTAGAGAACTTGTTAGTCTACCCTTCTTGTTCTTGCAGAAATAGAATTTGTTTAAGTTATTTAGTTTTCTTTCCTTCCTCGTATGAAATAGAAAAGTTTTGACACGTACTGCAAACCATACAGATTCGTTTGTATTTTGTACTTCAGTTTTTGTTGAGTTGCTTTGAAGCTGATAGAATCTAGTTTAAGACTCAGTGTTCATTATCCTTTATATGATAAGGAATCCTAAAAAAGCAGCTTCACCTTCTATTAGTCCCAAGCTTTTGACATGGCTGACCATCCTTAGCTTTGAAAAATGCTCGACTTATTCACCCTTCATCCTAACTTGAGAACTACTCGATTGGTTAGGATATATATCTTCGACTAAGAGCTCGAATCCTCCACTCCTACATGTTGTTGAACTAAAAAAATGATCATGCAACTGAGAGGCATCTTCCCGTTTTTCTTCCTTTAATTTTTAACTTGAAGGATTCATATAGCATTTTGATGTATCTTGCAGTGACTTGAAACTCTTTTCTTGGCTTTTTTTCTTGTTTTTTCCGCTTTCAATCACCTTCTTTTACTCAGTTTCGCAAGTGCTTTCATCAAATGATGTATGTGGGCTGAGTCATTCCTACCCAGTAGGGACTTCAACTATAATGCATTCTCTCGTTGTTCAATTAGACTTTTTTATTTTGAACGGTAAAGTCTTGTTTG TCTTCTTCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCATTTTTAATATCTGATCTGAACTGCAAACCAGTTTCGATTCGGTTCTCTTAGATTTCGGGGTTGGTAATCGGAGAACATCATGCGCCGGGAAGTGGTATTGCCGTTGTTCGTGCTCTGTTTCTTCGCCGCAGATCTTGTTCGAACTGGCCATTCAATCTGGTTGAACTTACCTGCATCTGGAACCAAGTGCGTCTCCGAGGAAATCCAGACCAACGTTGTTGTTCTTGCCGATTTTGTCGTTGTCGCTGATCATACTCATGCTCCCACCATTTCTGTCAAGGTGACATCTCCATACGGTAACAATCTTCATCACTCGGAGAACATAACGCACGGTCAGTTTGCGTTTACGACGAGTGAGGGTGGTAATTACCTAGCCTGTTTCTGGCTGACTGACCACAAGCATGAAGCTGGTACTGAGGTAAGTGTCAACCTTGACTGGAGAACAGGGATTGCAGCCAAGGATTGGGAATCAGTCGCAAAAAAAGAGAAGATTGAGGGTGTTGAACTCGAGCTGAGGAAACTCGAGGGAGCTGTCGAAGCTATCCATGAAAATCTGCTCTATCTCAGGGACAGAGAAGCTATCATGAGGACGGTCAGCGAGAGAACGAACGCACGAGTTGCGTGGTATAGTATCATGTCCTTGGGTGTCTGCATCATTGCTTCTACTCTACAGATATGGTACTTGAAGCGCTTCTTTCAGAAGAAAAAGCTTATTTAGAGAACTTGTTAGTCTACCCTTCTTGTTCTTGCAGAAATAGAATTTGTTTAAGTTATTTAGTTTTCTTTCCTTCCTCGTATGAAATAGAAAAGTTTTGACACGTACTGCAAACCATACAGATTCGTTTGTATTTTGTACTTCAGTTTTTGTTGAGTTGCTTTGAAGCTGATAGAATCTAGTTTAAGACTCAGTGTTCATTATCCTTTATATGATAAGGAATCCTAAAAAAGCAGCTTCACCTTCTATTAGTCCCAAGCTTTTGACATGGCTGACCATCCTTAGCTTTGAAAAATGCTCGACTTATTCACCCTTCATCCTAACTTGAGAACTACTCGATTGGTTAGGATATATATCTTCGACTAAGAGCTCGAATCCTCCACTCCTACATGTTGTTGAACTAAAAAAATGATCATGCAACTGAGAGGCATCTTCCCGTTTTTCTTCCTTTAATTTTTAACTTGAAGGATTCATATAGCATTTTGATGTATCTTGCAGTGACTTGAAACTCTTTTCTTGGCTTTTTTTCTTGTTTTTTCCGCTTTCAATCACCTTCTTTTACTCAGTTTCGCAAGTGCTTTCATCAAATGATGTATGTGGGCTGAGTCATTCCTACCCAGTAGGGACTTCAACTATAATGCATTCTCTCGTTGTTCAATTAGACTTTTTTATTTTGAACGGTAAAGTCTTGTTTG ATGCGCCGGGAAGTGGTATTGCCGTTGTTCGTGCTCTGTTTCTTCGCCGCAGATCTTGTTCGAACTGGCCATTCAATCTGGTTGAACTTACCTGCATCTGGAACCAAGTGCGTCTCCGAGGAAATCCAGACCAACGTTGTTGTTCTTGCCGATTTTGTCGTTGTCGCTGATCATACTCATGCTCCCACCATTTCTGTCAAGGTGACATCTCCATACGGTAACAATCTTCATCACTCGGAGAACATAACGCACGGTCAGTTTGCGTTTACGACGAGTGAGGGTGGTAATTACCTAGCCTGTTTCTGGCTGACTGACCACAAGCATGAAGCTGGTACTGAGGTAAGTGTCAACCTTGACTGGAGAACAGGGATTGCAGCCAAGGATTGGGAATCAGTCGCAAAAAAAGAGAAGATTGAGGGTGTTGAACTCGAGCTGAGGAAACTCGAGGGAGCTGTCGAAGCTATCCATGAAAATCTGCTCTATCTCAGGGACAGAGAAGCTATCATGAGGACGGTCAGCGAGAGAACGAACGCACGAGTTGCGTGGTATAGTATCATGTCCTTGGGTGTCTGCATCATTGCTTCTACTCTACAGATATGGTACTTGAAGCGCTTCTTTCAGAAGAAAAAGCTTATTTAG MRREVVLPLFVLCFFAADLVRTGHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVADHTHAPTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLDWRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLRDREAIMRTVSERTNARVAWYSIMSLGVCIIASTLQIWYLKRFFQKKKLI Homology
BLAST of Carg26426 vs. NCBI nr
Match: KAG7031012.1 (Transmembrane emp24 domain-containing protein p24delta3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 426.0 bits (1094), Expect = 1.9e-115 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of Carg26426 vs. NCBI nr
Match: XP_022942793.1 (transmembrane emp24 domain-containing protein p24delta3-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 425.6 bits (1093), Expect = 2.5e-115 Identity = 211/212 (99.53%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of Carg26426 vs. NCBI nr
Match: XP_023533831.1 (transmembrane emp24 domain-containing protein p24delta3-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 420.6 bits (1080), Expect = 7.9e-114 Identity = 209/212 (98.58%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of Carg26426 vs. NCBI nr
Match: XP_022982726.1 (transmembrane emp24 domain-containing protein p24delta3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 419.5 bits (1077), Expect = 1.8e-113 Identity = 208/212 (98.11%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of Carg26426 vs. NCBI nr
Match: KAG6600353.1 (Transmembrane emp24 domain-containing protein p24delta3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 403.3 bits (1035), Expect = 1.3e-108 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of Carg26426 vs. ExPASy Swiss-Prot
Match: Q6IDL4 (Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana OX=3702 GN=At1g09580 PE=1 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.7e-79 Identity = 147/213 (69.01%), Postives = 176/213 (82.63%), Query Frame = 0
BLAST of Carg26426 vs. ExPASy Swiss-Prot
Match: Q9FVU0 (Transmembrane emp24 domain-containing protein p24delta4 OS=Arabidopsis thaliana OX=3702 GN=CYB PE=1 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 3.3e-70 Identity = 131/213 (61.50%), Postives = 170/213 (79.81%), Query Frame = 0
BLAST of Carg26426 vs. ExPASy Swiss-Prot
Match: Q8RWM6 (Transmembrane emp24 domain-containing protein p24delta5 OS=Arabidopsis thaliana OX=3702 GN=At1g21900 PE=1 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 2.8e-69 Identity = 134/207 (64.73%), Postives = 161/207 (77.78%), Query Frame = 0
BLAST of Carg26426 vs. ExPASy Swiss-Prot
Match: F4J4Y0 (Transmembrane emp24 domain-containing protein p24delta6 OS=Arabidopsis thaliana OX=3702 GN=At3g10780 PE=1 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 2.2e-50 Identity = 105/192 (54.69%), Postives = 132/192 (68.75%), Query Frame = 0
BLAST of Carg26426 vs. ExPASy Swiss-Prot
Match: Q9LQY3 (Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana OX=3702 GN=At1g26690 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.1e-41 Identity = 86/211 (40.76%), Postives = 135/211 (63.98%), Query Frame = 0
BLAST of Carg26426 vs. ExPASy TrEMBL
Match: A0A6J1FVP8 (transmembrane emp24 domain-containing protein p24delta3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447721 PE=3 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115 Identity = 211/212 (99.53%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of Carg26426 vs. ExPASy TrEMBL
Match: A0A6J1J056 (transmembrane emp24 domain-containing protein p24delta3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481506 PE=3 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 8.5e-114 Identity = 208/212 (98.11%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of Carg26426 vs. ExPASy TrEMBL
Match: A0A0A0L744 (GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G214030 PE=3 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 1.7e-106 Identity = 191/212 (90.09%), Postives = 203/212 (95.75%), Query Frame = 0
BLAST of Carg26426 vs. ExPASy TrEMBL
Match: A0A1S3C1Z4 (transmembrane emp24 domain-containing protein p24delta3-like OS=Cucumis melo OX=3656 GN=LOC103496123 PE=3 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 4.2e-105 Identity = 189/212 (89.15%), Postives = 203/212 (95.75%), Query Frame = 0
BLAST of Carg26426 vs. ExPASy TrEMBL
Match: A0A6J1D5F4 (transmembrane emp24 domain-containing protein p24delta3-like OS=Momordica charantia OX=3673 GN=LOC111017772 PE=3 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 9.8e-102 Identity = 188/212 (88.68%), Postives = 197/212 (92.92%), Query Frame = 0
BLAST of Carg26426 vs. TAIR 10
Match: AT1G09580.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 297.0 bits (759), Expect = 1.2e-80 Identity = 147/213 (69.01%), Postives = 176/213 (82.63%), Query Frame = 0
BLAST of Carg26426 vs. TAIR 10
Match: AT1G57620.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 266.2 bits (679), Expect = 2.3e-71 Identity = 131/213 (61.50%), Postives = 170/213 (79.81%), Query Frame = 0
BLAST of Carg26426 vs. TAIR 10
Match: AT1G21900.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 263.1 bits (671), Expect = 2.0e-70 Identity = 134/207 (64.73%), Postives = 161/207 (77.78%), Query Frame = 0
BLAST of Carg26426 vs. TAIR 10
Match: AT3G10780.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 200.3 bits (508), Expect = 1.6e-51 Identity = 105/192 (54.69%), Postives = 132/192 (68.75%), Query Frame = 0
BLAST of Carg26426 vs. TAIR 10
Match: AT1G26690.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 171.4 bits (433), Expect = 7.8e-43 Identity = 86/211 (40.76%), Postives = 135/211 (63.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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