Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAACTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCAACAGGCTGAGGATCATCTCGATTCCGTCATGGAAGATGCTATGGATGAGTTCAGAAAGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGTTGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA
mRNA sequence
ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAACTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCAACAGGCTGAGGATCATCTCGATTCCGTCATGGAAGATGCTATGGATGAGTTCAGAAAGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGTTGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA
Coding sequence (CDS)
ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAACTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCAACAGGCTGAGGATCATCTCGATTCCGTCATGGAAGATGCTATGGATGAGTTCAGAAAGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGTTGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA
Protein sequence
MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Homology
BLAST of Carg26425 vs. NCBI nr
Match:
KAG7031013.1 (hypothetical protein SDJN02_05052, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 271.9 bits (694), Expect = 3.1e-69
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
Query: 1 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ
Sbjct: 1 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
Query: 61 QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRY 120
QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRY
Sbjct: 61 QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRY 120
Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
BLAST of Carg26425 vs. NCBI nr
Match:
KAG6600354.1 (hypothetical protein SDJN03_05587, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 271.2 bits (692), Expect = 5.4e-69
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0
Query: 1 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ
Sbjct: 1 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
Query: 61 QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRY 120
QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARK+GSLMEKAAAVASKRY
Sbjct: 61 QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
BLAST of Carg26425 vs. NCBI nr
Match:
XP_022942791.1 (uncharacterized protein LOC111447720 [Cucurbita moschata] >XP_022942792.1 uncharacterized protein LOC111447720 [Cucurbita moschata])
HSP 1 Score: 267.3 bits (682), Expect = 7.8e-68
Identity = 143/147 (97.28%), Postives = 147/147 (100.00%), Query Frame = 0
Query: 1 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ
Sbjct: 1 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
Query: 61 QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRY 120
QAED+LDSVMEDAMDEFR+FEEEFDRMAEAELQDL+DKSEKARK+GSLMEKAAAVASKRY
Sbjct: 61 QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120
Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
BLAST of Carg26425 vs. NCBI nr
Match:
XP_022982937.1 (uncharacterized protein LOC111481629 isoform X1 [Cucurbita maxima] >XP_022982945.1 uncharacterized protein LOC111481629 isoform X2 [Cucurbita maxima])
HSP 1 Score: 263.1 bits (671), Expect = 1.5e-66
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0
Query: 1 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAM
Sbjct: 40 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 99
Query: 61 QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRY 120
QAED+LDSVMEDA+DEFR+FEEEFDRMAE ELQDLVDKSEKARK+GSLMEKAAAVASKRY
Sbjct: 100 QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 159
Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 160 MEAAMNSATASMRSAWKAISSNKVHPS 186
BLAST of Carg26425 vs. NCBI nr
Match:
XP_023533822.1 (uncharacterized protein LOC111795549 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 263.1 bits (671), Expect = 1.5e-66
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0
Query: 1 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAA+ELQHQNE RDAEIAMQ
Sbjct: 90 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAAMELQHQNEVRDAEIAMQ 149
Query: 61 QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRY 120
QAED+LDSVMEDAMDEFR+FEEEFDRMAEAELQDLVDKSEKARK+G LMEKAAAVASKRY
Sbjct: 150 QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLVDKSEKARKMGRLMEKAAAVASKRY 209
Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 210 MEAAMNSATASMRSAWKAISSNKVHPS 236
BLAST of Carg26425 vs. ExPASy TrEMBL
Match:
A0A6J1FR93 (uncharacterized protein LOC111447720 OS=Cucurbita moschata OX=3662 GN=LOC111447720 PE=4 SV=1)
HSP 1 Score: 267.3 bits (682), Expect = 3.8e-68
Identity = 143/147 (97.28%), Postives = 147/147 (100.00%), Query Frame = 0
Query: 1 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ
Sbjct: 1 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
Query: 61 QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRY 120
QAED+LDSVMEDAMDEFR+FEEEFDRMAEAELQDL+DKSEKARK+GSLMEKAAAVASKRY
Sbjct: 61 QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120
Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
BLAST of Carg26425 vs. ExPASy TrEMBL
Match:
A0A6J1IXX5 (uncharacterized protein LOC111481629 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481629 PE=4 SV=1)
HSP 1 Score: 263.1 bits (671), Expect = 7.1e-67
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0
Query: 1 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAM
Sbjct: 40 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 99
Query: 61 QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRY 120
QAED+LDSVMEDA+DEFR+FEEEFDRMAE ELQDLVDKSEKARK+GSLMEKAAAVASKRY
Sbjct: 100 QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 159
Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 160 MEAAMNSATASMRSAWKAISSNKVHPS 186
BLAST of Carg26425 vs. ExPASy TrEMBL
Match:
A0A0A0LAB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214020 PE=4 SV=1)
HSP 1 Score: 253.1 bits (645), Expect = 7.3e-64
Identity = 135/147 (91.84%), Postives = 143/147 (97.28%), Query Frame = 0
Query: 1 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA+ELQHQNE +DAEIAMQ
Sbjct: 1 MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60
Query: 61 QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRY 120
QAED+LDSVMEDAMDEFR+FEEEFDRMAEAELQ L+DKSEKARK+GSLMEKAA+VASKRY
Sbjct: 61 QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120
Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
BLAST of Carg26425 vs. ExPASy TrEMBL
Match:
A0A6J1E4Z9 (uncharacterized protein LOC111430656 OS=Cucurbita moschata OX=3662 GN=LOC111430656 PE=4 SV=1)
HSP 1 Score: 247.7 bits (631), Expect = 3.1e-62
Identity = 134/147 (91.16%), Postives = 143/147 (97.28%), Query Frame = 0
Query: 1 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
MEALISQFTFLSD+AL+DKNFDPSTIEDLMKLFEIEAY SWAA ELQ QNE ++AEIAMQ
Sbjct: 1 MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
Query: 61 QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRY 120
+AED+LDSVMEDAMDEFR+FEEEFDRMAEAELQ+LVDKSEKARK+GSLMEKAAAVASKRY
Sbjct: 61 KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
BLAST of Carg26425 vs. ExPASy TrEMBL
Match:
A0A6J1JCA1 (uncharacterized protein LOC111483158 OS=Cucurbita maxima OX=3661 GN=LOC111483158 PE=4 SV=1)
HSP 1 Score: 246.9 bits (629), Expect = 5.2e-62
Identity = 133/147 (90.48%), Postives = 141/147 (95.92%), Query Frame = 0
Query: 1 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA ELQ QNE ++AEIAMQ
Sbjct: 1 MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
Query: 61 QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRY 120
QAED+LDSVMEDAMDEFR+FEEEFDRMAE ELQ+LVDKSEKARK+GSLMEKAAA+ASKRY
Sbjct: 61 QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120
Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
BLAST of Carg26425 vs. TAIR 10
Match:
AT1G60870.1 (maternal effect embryo arrest 9 )
HSP 1 Score: 158.7 bits (400), Expect = 3.6e-39
Identity = 87/147 (59.18%), Postives = 113/147 (76.87%), Query Frame = 0
Query: 1 MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
MEALI FT LSD+AL DK FDPS IEDLM+LFE+++Y +WAALE + Q E +AE +++
Sbjct: 1 MEALIHHFTLLSDQALVDKTFDPSRIEDLMRLFEVDSYKAWAALESEQQQELEEAEESLR 60
Query: 61 QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRY 120
+AE LD ME M+E+R+ EE +RM AEL++L +K+E AR+ G+LMEKAA VA+KR+
Sbjct: 61 EAELELDRDMEWGMEEYRRTLEEMERMEAAELKELEEKAETARRTGNLMEKAATVAAKRH 120
Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
+ AAM SA ASMRSAWK + NKVHPS
Sbjct: 121 IAAAMGSAAASMRSAWKTAAGNKVHPS 147
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7031013.1 | 3.1e-69 | 100.00 | hypothetical protein SDJN02_05052, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6600354.1 | 5.4e-69 | 99.32 | hypothetical protein SDJN03_05587, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022942791.1 | 7.8e-68 | 97.28 | uncharacterized protein LOC111447720 [Cucurbita moschata] >XP_022942792.1 unchar... | [more] |
XP_022982937.1 | 1.5e-66 | 95.92 | uncharacterized protein LOC111481629 isoform X1 [Cucurbita maxima] >XP_022982945... | [more] |
XP_023533822.1 | 1.5e-66 | 95.92 | uncharacterized protein LOC111795549 isoform X2 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1FR93 | 3.8e-68 | 97.28 | uncharacterized protein LOC111447720 OS=Cucurbita moschata OX=3662 GN=LOC1114477... | [more] |
A0A6J1IXX5 | 7.1e-67 | 95.92 | uncharacterized protein LOC111481629 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A0A0LAB6 | 7.3e-64 | 91.84 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214020 PE=4 SV=1 | [more] |
A0A6J1E4Z9 | 3.1e-62 | 91.16 | uncharacterized protein LOC111430656 OS=Cucurbita moschata OX=3662 GN=LOC1114306... | [more] |
A0A6J1JCA1 | 5.2e-62 | 90.48 | uncharacterized protein LOC111483158 OS=Cucurbita maxima OX=3661 GN=LOC111483158... | [more] |
Match Name | E-value | Identity | Description | |
AT1G60870.1 | 3.6e-39 | 59.18 | maternal effect embryo arrest 9 | [more] |