Carg26368 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGGGCAGCTGTTTTCCGTTCGCGTTATTTGAAGAACTCGGCGGAATCTTCGATTTCCTGCAATTCGATCGATCTTCATCGTCGTTGTCGATACGATATCAGAGCTCAAGAAGCAACGATGCCGAAGAAGATGGGCGTAAACAGCAAAGCTGAGGCGGCGAGAGCACGCAAGAATTCCGCTGAGACCGAGCGCAAGGAGCGGGAGACTCGGGAGAAGGCGGATCAGTACTGGCGTGAAGCTGAGGGTCCCAAGTCCCGTGCCGCCAAGAAGCGAGAGGATGAATCTGAGAAGCGTGCTGAGGCCGCTGCTCGCAAGGCGGAGGCACGCCGCTTGGCTGAACAGGAGGAGAAGGAATTGGAGAAAGCCATGAAGAAGCCTGACAAGAAGGCGAATAGGGTTTCGATTCCGGTCCCCAAGGTGACCGAAGTTCAATTGAGGAAGAACAAAGAGGTGGAGGAAGCGGAGCTTCAGAGGAAGGCCGAGGAGGCTAAGAAAAAGCTGAGCCGGACGGCGGAGGAGGAGGAGTATGAGAGGATGGTGCTGGTGAGCAATACCAATCGGGATGATTCTATTATCGAGGCCAGGACGGTAGAAGACGCGATTTCTCAGATATCTGTTGCGGACAATTTACCCGTGGATAGGCATCCAGAGCGACGGCTCAAGGCCTCATTTAAGGTGCGGCTGGTTTCCCTTGTTCTTACAATTTTAATATCGAAACGAATCCAGAACGTCTATATCACCTTGATTGTTTGTTGTCTCGCTCTTTGTTCCTTCTCGCCGTTTGTTAGTTTTGATGGTTTAATCCTATTTGTTAGAACTCGTGTTCATAACAATGAAATAGGAAAGTTTAGGATGTCTGGAAACGACATGTTGAACGGAAGACTGGGGCATAGAAGCTTATTATAGGATCAACTATGGTAGTATGAATGGTGGGCACATGTTATCTTGAGGCCTGCTGCAAATTTTTTAGCGAGTTATATTGTTGTAATCTATTGGAAATCGAAATCTAACAGAACAGCTTCTAAATTTTGAAATAGCTTCTTTAGGAGTAAGCATTATATCAATTATCTTTGTCACTCAGTATTACATAAGTTATCAACAGTTCAGGTAGCTTGACTTCTTGTGTTGCTGCTTCTCTTAGGATAGAATATGTCTACTGGTGAGTGATGCGAGGAGTTGGATTGATTCTGTGAAGGGAGTTAGTTTTTGTCGACTTCCCTTCACTCTTATTTGCTCTTGGATTGTGCTCTTTATACCCCGCTGTGAGATGCCACATCGGTTGGAGAGGGGAACGAAACATTTTTTATAAGAGTGTGGAAACCTCTCCCTAGAAGACGTGTTTTAAAAACCTTGAAGGGAAGCCCGAAAGGGAAAGCCCAAAGATGACAATATCTGTTAGTGGTGGGCTTGGGCTGTTACAAAGGGTATCAGAGCCAGACACTAAGCAGTGTGTCAGCGAAAACGCTGGTCCCCGAAGGGGGGTGGATTGTGAGATCCCACATCGATTGGAGAGAGGAACGATTGCCAGCAAGTACGCTGGGTTCCGAAGGGGGGTGAATTGTGAGATCCCACGTCAATTGGAAAGAGGAACGAGTGCCAGCGAGGACTCTGGGCCTCGAAGAGGGGTGGATTGTAAGATCTCTCATCGATTGCAGAGGGTAACGAAACATTATTTATAAGGGTGTGAAAATCTCTCCCTAACCGACGCATTTTAAAAACCTTGAGGCAAAGAGGATAATATCTGCCGGTGGGTTTGGGCTGTTACACCCCTCTTTGCACACACTTTATTTCTGATATCTTTGCATGCACTTTATTTCTGATATGATATTTGTCCATCTTCAGAATGTTTATGGTGATGGTACCTGTTGGTAACTTGTCTGGTTCTGATCTTTTAACATAGTTACTTGTGATCTCCCTGAGATGCTGTTTTTTCTTCTTAGCTTTTATGATAATGGCTTTTGTCTCCAACCAAAAAAATTTAATTTCTACACCTATGTTTTGGATTGACGGGCTTTCTGATGTTATCTCAGCTCCTATCATGTGGCAAGTAGAAATTAACCTGTTTCTACTCTTATGTTTTGGATAGACAGCCTTTTCTGATGCTTCTCAAATTTTATGACAGCTATCTAACATTTCAATATATTTTCACTGAATTTTCACTTGTATTCAATGCCTAATGTAAGATCCTACGTCAGTTGGAGAAGGGAACGAATCAATCTTATAAGGGTGTGGAAACCTGTCCCTAGTAGACGAGTTTTAAAACCTTAAGGGGAAGCCCTTGAAGGGAAAGCTCAAAGAAGACAATATCTGCTAGCGGTGGACTTGGGCTGTTACAAATGGTATCAAAGCTAGACAACGGGTGGTTGCCAGCGAGGACGCTGGGCCCCGAGGGGGGTGGATTATGAGATCCTACATCGGTTGGAGAGGGAAACGAAGCATTTCTTATAAGGGTGTGGAAACCTCTTCCTAGTACACGCATTTTAAAACCTTGAGGGGAAGCCCTTGAAGAGAAAGCCCAAAAAGGACAATATTTGATAGCGGTGAGCTTGGGTTGTTATACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTTTTAAATTTTTTATTTAAAGAATCATGTTAAATTATTTGTTCTTGTTTTAACAACTTGCCTTTTTCTGTTCATATCATCAACTAAATGCTTTGTTTCACATTTAAAAAAAAAAACTTGCCCCCTCCTGAGAAGTTCATAGATTATGGATCAACTATTTTGGATGGAGGTGAAGTGGTTAATTATTCATAAAATTTAGACCACAAGCTTTGGAAACATGAAACTCAGGATATTTTTCATCTAAATCTATTGCCTACCAACTCAATACTGCCAGTGAAAAACTCTTAACAATAATAATTAATGAATGTCATCGGGATATTTAGGAGCATATTAGTCATCAGCTTAGGAATTTATAGGTGGGAGATGGTTATAAGTAAGGTGAGAAGAAAAGCTGTGGTTTGTTCAGTTGTGTAAAAGCTCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGACTTTCTCTTGAGGTTTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAACAATGTTTCGTTATCCTCCCCAACCGATGTGGGATCTCACAATTTGAGTCTAGAGGGAGGTGTCCAAGTTCCTCGAGTTACCTAGGATATTGTATTCTACTTTTCTCTCCAAGTTTTCACTGCAATTTCAATTATTTGGTTCTTGTGGGAGTTGTTAGATCTTCGCAACAAACGTGGATCGTTGGACAGTTTTGTTGGAATTATACGAAATACCGAAAGGAAGAAGCGACTTCAGTTAAATTAAACCCATTTGAGGGGATAAAATTAAAACCCTGATGTTCCGTATAAAATAAAAATGTACTGTTACTGAGTTTTCTTTGCCCCTGGTGTTCTGATGATTAGGCTTTTGAAGAAGCTGAGCTCCCCAGGCTGAAGGAAGAGAAACCTGGTCTTACTCACAATCAGTACAAGGACATGATATGGAAGCTATGGAAGAAGTCTCCTGACAACCCTCTTAATCAGGTAGCTTTAACGTACAAGTTTTTTTAAAGAACATTATTCTGGCTCTCCTTCTTCCTTAGAACCGTGCATGCTTTTAAATTTTGTGGTGGTAGGTTGCAGCAGAGTGATTGGATCCATGTCCTTCAACAAGGGGCAGGCCGGACTATCCCTTGAGTTTTAAGTCTATTTGCTAAACTTCTGTCATAGTTCAAAATCTGACCAATTCCTTTTCAGTTCAGTTGTATCCTGGAATGTTTAGATTGATAATGGGTCTTCGTCTCTCTGTTGCATACTATGGCATGGGTCTCTCGTAAATGCATATAAATAGTTTTGGGTCCTGTGTTGTACAATAAGAATCAATATTATGACCTTGGTTCTGTTGCATTTGGTGCATAGGCATTTAAGTGAATCCTTGAGGTTGTAAGAAATGGTTTGGTTCGTTTCGATCTTACCTCGGAGATTCCGAAATATGGTACATTGGTTTAGAGGCTGCATTTTGGAAGTCATAAGGTTTTAAGAAATGGTTTAGTTTGTTTCGATCTTACCTCGGAGATTCCGAAATATGGTACATAGGTTTAGAGGCTGCATTTTGGAAGTCATAAAG TTTGGGCAGCTGTTTTCCGTTCGCGTTATTTGAAGAACTCGGCGGAATCTTCGATTTCCTGCAATTCGATCGATCTTCATCGTCGTTGTCGATACGATATCAGAGCTCAAGAAGCAACGATGCCGAAGAAGATGGGCGTAAACAGCAAAGCTGAGGCGGCGAGAGCACGCAAGAATTCCGCTGAGACCGAGCGCAAGGAGCGGGAGACTCGGGAGAAGGCGGATCAGTACTGGCGTGAAGCTGAGGGTCCCAAGTCCCGTGCCGCCAAGAAGCGAGAGGATGAATCTGAGAAGCGTGCTGAGGCCGCTGCTCGCAAGGCGGAGGCACGCCGCTTGGCTGAACAGGAGGAGAAGGAATTGGAGAAAGCCATGAAGAAGCCTGACAAGAAGGCGAATAGGGTTTCGATTCCGGTCCCCAAGGTGACCGAAGTTCAATTGAGGAAGAACAAAGAGGTGGAGGAAGCGGAGCTTCAGAGGAAGGCCGAGGAGGCTAAGAAAAAGCTGAGCCGGACGGCGGAGGAGGAGGAGTATGAGAGGATGGTGCTGGTGAGCAATACCAATCGGGATGATTCTATTATCGAGGCCAGGACGGTAGAAGACGCGATTTCTCAGATATCTGTTGCGGACAATTTACCCGTGGATAGGCATCCAGAGCGACGGCTCAAGGCCTCATTTAAGGCTTTTGAAGAAGCTGAGCTCCCCAGGCTGAAGGAAGAGAAACCTGGTCTTACTCACAATCAGTACAAGGACATGATATGGAAGCTATGGAAGAAGTCTCCTGACAACCCTCTTAATCAGGTTGCAGCAGAGTGATTGGATCCATGTCCTTCAACAAGGGGCAGGCCGGACTATCCCTTGAGTTTTAAGTCTATTTGCTAAACTTCTGTCATAGTTCAAAATCTGACCAATTCCTTTTCAGTTCAGTTGTATCCTGGAATGTTTAGATTGATAATGGGTCTTCGTCTCTCTGTTGCATACTATGGCATGGGTCTCTCGTAAATGCATATAAATAGTTTTGGGTCCTGTGTTGTACAATAAGAATCAATATTATGACCTTGGTTCTGTTGCATTTGGTGCATAGGCATTTAAGTGAATCCTTGAGGTTGTAAGAAATGGTTTGGTTCGTTTCGATCTTACCTCGGAGATTCCGAAATATGGTACATTGGTTTAGAGGCTGCATTTTGGAAGTCATAAGGTTTTAAGAAATGGTTTAGTTTGTTTCGATCTTACCTCGGAGATTCCGAAATATGGTACATAGGTTTAGAGGCTGCATTTTGGAAGTCATAAAG ATGCCGAAGAAGATGGGCGTAAACAGCAAAGCTGAGGCGGCGAGAGCACGCAAGAATTCCGCTGAGACCGAGCGCAAGGAGCGGGAGACTCGGGAGAAGGCGGATCAGTACTGGCGTGAAGCTGAGGGTCCCAAGTCCCGTGCCGCCAAGAAGCGAGAGGATGAATCTGAGAAGCGTGCTGAGGCCGCTGCTCGCAAGGCGGAGGCACGCCGCTTGGCTGAACAGGAGGAGAAGGAATTGGAGAAAGCCATGAAGAAGCCTGACAAGAAGGCGAATAGGGTTTCGATTCCGGTCCCCAAGGTGACCGAAGTTCAATTGAGGAAGAACAAAGAGGTGGAGGAAGCGGAGCTTCAGAGGAAGGCCGAGGAGGCTAAGAAAAAGCTGAGCCGGACGGCGGAGGAGGAGGAGTATGAGAGGATGGTGCTGGTGAGCAATACCAATCGGGATGATTCTATTATCGAGGCCAGGACGGTAGAAGACGCGATTTCTCAGATATCTGTTGCGGACAATTTACCCGTGGATAGGCATCCAGAGCGACGGCTCAAGGCCTCATTTAAGGCTTTTGAAGAAGCTGAGCTCCCCAGGCTGAAGGAAGAGAAACCTGGTCTTACTCACAATCAGTACAAGGACATGATATGGAAGCTATGGAAGAAGTCTCCTGACAACCCTCTTAATCAGGTTGCAGCAGAGTGA MPKKMGVNSKAEAARARKNSAETERKERETREKADQYWREAEGPKSRAAKKREDESEKRAEAAARKAEARRLAEQEEKELEKAMKKPDKKANRVSIPVPKVTEVQLRKNKEVEEAELQRKAEEAKKKLSRTAEEEEYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERRLKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQVAAE Homology
BLAST of Carg26368 vs. NCBI nr
Match: KAG7022746.1 (Coiled-coil domain-containing protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 408.3 bits (1048), Expect = 4.4e-110 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of Carg26368 vs. NCBI nr
Match: XP_022928519.1 (coiled-coil domain-containing protein 124-like [Cucurbita moschata] >KAG6589031.1 Coiled-coil domain-containing protein 124, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 407.1 bits (1045), Expect = 9.8e-110 Identity = 229/230 (99.57%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of Carg26368 vs. NCBI nr
Match: XP_023529785.1 (coiled-coil domain-containing protein 124-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 406.0 bits (1042), Expect = 2.2e-109 Identity = 228/230 (99.13%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of Carg26368 vs. NCBI nr
Match: XP_022989461.1 (coiled-coil domain-containing protein 124-like [Cucurbita maxima]) HSP 1 Score: 406.0 bits (1042), Expect = 2.2e-109 Identity = 228/230 (99.13%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of Carg26368 vs. NCBI nr
Match: KAG7011791.1 (Coiled-coil domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 381.3 bits (978), Expect = 5.8e-102 Identity = 212/230 (92.17%), Postives = 224/230 (97.39%), Query Frame = 0
BLAST of Carg26368 vs. ExPASy Swiss-Prot
Match: Q2TBV6 (Coiled-coil domain-containing protein 124 OS=Bos taurus OX=9913 GN=CCDC124 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.2e-24 Identity = 91/231 (39.39%), Postives = 139/231 (60.17%), Query Frame = 0
BLAST of Carg26368 vs. ExPASy Swiss-Prot
Match: Q96CT7 (Coiled-coil domain-containing protein 124 OS=Homo sapiens OX=9606 GN=CCDC124 PE=1 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.1e-23 Identity = 92/233 (39.48%), Postives = 141/233 (60.52%), Query Frame = 0
BLAST of Carg26368 vs. ExPASy Swiss-Prot
Match: Q5R8X8 (Coiled-coil domain-containing protein 124 OS=Pongo abelii OX=9601 GN=CCDC124 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.5e-23 Identity = 92/233 (39.48%), Postives = 140/233 (60.09%), Query Frame = 0
BLAST of Carg26368 vs. ExPASy Swiss-Prot
Match: Q9D8X2 (Coiled-coil domain-containing protein 124 OS=Mus musculus OX=10090 GN=Ccdc124 PE=1 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 4.2e-23 Identity = 90/229 (39.30%), Postives = 134/229 (58.52%), Query Frame = 0
BLAST of Carg26368 vs. ExPASy Swiss-Prot
Match: Q6PHE8 (Coiled-coil domain-containing protein 124 OS=Danio rerio OX=7955 GN=ccdc124 PE=2 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.0e-21 Identity = 87/234 (37.18%), Postives = 130/234 (55.56%), Query Frame = 0
BLAST of Carg26368 vs. ExPASy TrEMBL
Match: A0A6J1EL24 (coiled-coil domain-containing protein 124-like OS=Cucurbita moschata OX=3662 GN=LOC111435306 PE=3 SV=1) HSP 1 Score: 407.1 bits (1045), Expect = 4.7e-110 Identity = 229/230 (99.57%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of Carg26368 vs. ExPASy TrEMBL
Match: A0A6J1JK47 (coiled-coil domain-containing protein 124-like OS=Cucurbita maxima OX=3661 GN=LOC111486511 PE=3 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 1.1e-109 Identity = 228/230 (99.13%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of Carg26368 vs. ExPASy TrEMBL
Match: A0A6J1GNJ0 (coiled-coil domain-containing protein 124-like OS=Cucurbita moschata OX=3662 GN=LOC111455569 PE=3 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 6.2e-102 Identity = 211/230 (91.74%), Postives = 224/230 (97.39%), Query Frame = 0
BLAST of Carg26368 vs. ExPASy TrEMBL
Match: A0A5D3DID7 (Coiled-coil domain-containing protein 124 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G004160 PE=3 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 3.1e-101 Identity = 210/230 (91.30%), Postives = 225/230 (97.83%), Query Frame = 0
BLAST of Carg26368 vs. ExPASy TrEMBL
Match: A0A1S3BJ47 (coiled-coil domain-containing protein 124 OS=Cucumis melo OX=3656 GN=LOC103490249 PE=3 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 3.1e-101 Identity = 210/230 (91.30%), Postives = 225/230 (97.83%), Query Frame = 0
BLAST of Carg26368 vs. TAIR 10
Match: AT1G16210.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1014 (InterPro:IPR010422); Has 16107 Blast hits to 8386 proteins in 1107 species: Archae - 26; Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants - 526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI BLink). ) HSP 1 Score: 316.6 bits (810), Expect = 1.6e-86 Identity = 167/229 (72.93%), Postives = 208/229 (90.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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