Carg26318 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg26318
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor HEC2-like
Location	Carg_Chr09: 6823919 .. 6824632 (+)
RNA-Seq Expression	Carg26318
Synteny	Carg26318

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATGATGATCTGAAATCGGAGGATCAGATGGAGATTATGATGATGATGCAACAAATGGAGAAAATCCCTGAATTTTACAATCATCTCTCACCGCCCTCCGATCATTTCAGCTCAAGCACCACCGACCCACATTGCCTGGAAACCCTTCAACAAGCCGCGGAGTCCTCGTCGCCTCCATTCACCAACAACCTACCTTATAATTTGCCTCAAACTGTTCCATTCCCCACCAGTTCACGGTGGCGAAACTCTGGCGGTGAAACGGACTTGCAGAAACAGAGGTCGGTGGCGGCGATGAGGGAGATGATATTCCGAATAGCAGTGATGCAACCAATCCAAATAGACCCAGAAGCGGTGAAGCCACCAAAGAGGAGGAACGTCAAGATTTCAACCGACCCACAAAGCGTAGCGGCTCGACATAGAAGAGAGAGAATTAGCGAGAGAATTAGGATACTCCAAAGATTGGTCCCTGGAGGTACCAAAATGGATACCGCTTCTATGTTGGATGAGGCTATACATTACGTTAAATTCTTGAAGACCCAAGTGCAATCCCTCGAAAGAGCCGCCACCAACAGGCCACTCCCTGATGCTGCTGCAGCAGCAGCAGCATCTGGCGTAGGGTTTCCTCTGGAAATGTCAAGTGGCAGCTATGTCCCCATGGCCAAACCATCCCAAATCACTCACAACCTTGAGCAGTACGGAGATGCTTAA

mRNA sequence

ATGGAAAATGATGATCTGAAATCGGAGGATCAGATGGAGATTATGATGATGATGCAACAAATGGAGAAAATCCCTGAATTTTACAATCATCTCTCACCGCCCTCCGATCATTTCAGCTCAAGCACCACCGACCCACATTGCCTGGAAACCCTTCAACAAGCCGCGGAGTCCTCGTCGCCTCCATTCACCAACAACCTACCTTATAATTTGCCTCAAACTGTTCCATTCCCCACCAGTTCACGGTGGCGAAACTCTGGCGGTGAAACGGACTTGCAGAAACAGAGGTCGGTGGCGGCGATGAGGGAGATGATATTCCGAATAGCAGTGATGCAACCAATCCAAATAGACCCAGAAGCGGTGAAGCCACCAAAGAGGAGGAACGTCAAGATTTCAACCGACCCACAAAGCGTAGCGGCTCGACATAGAAGAGAGAGAATTAGCGAGAGAATTAGGATACTCCAAAGATTGGTCCCTGGAGGTACCAAAATGGATACCGCTTCTATGTTGGATGAGGCTATACATTACGTTAAATTCTTGAAGACCCAAGTGCAATCCCTCGAAAGAGCCGCCACCAACAGGCCACTCCCTGATGCTGCTGCAGCAGCAGCAGCATCTGGCGTAGGGTTTCCTCTGGAAATGTCAAGTGGCAGCTATGTCCCCATGGCCAAACCATCCCAAATCACTCACAACCTTGAGCAGTACGGAGATGCTTAA

Coding sequence (CDS)

ATGGAAAATGATGATCTGAAATCGGAGGATCAGATGGAGATTATGATGATGATGCAACAAATGGAGAAAATCCCTGAATTTTACAATCATCTCTCACCGCCCTCCGATCATTTCAGCTCAAGCACCACCGACCCACATTGCCTGGAAACCCTTCAACAAGCCGCGGAGTCCTCGTCGCCTCCATTCACCAACAACCTACCTTATAATTTGCCTCAAACTGTTCCATTCCCCACCAGTTCACGGTGGCGAAACTCTGGCGGTGAAACGGACTTGCAGAAACAGAGGTCGGTGGCGGCGATGAGGGAGATGATATTCCGAATAGCAGTGATGCAACCAATCCAAATAGACCCAGAAGCGGTGAAGCCACCAAAGAGGAGGAACGTCAAGATTTCAACCGACCCACAAAGCGTAGCGGCTCGACATAGAAGAGAGAGAATTAGCGAGAGAATTAGGATACTCCAAAGATTGGTCCCTGGAGGTACCAAAATGGATACCGCTTCTATGTTGGATGAGGCTATACATTACGTTAAATTCTTGAAGACCCAAGTGCAATCCCTCGAAAGAGCCGCCACCAACAGGCCACTCCCTGATGCTGCTGCAGCAGCAGCAGCATCTGGCGTAGGGTTTCCTCTGGAAATGTCAAGTGGCAGCTATGTCCCCATGGCCAAACCATCCCAAATCACTCACAACCTTGAGCAGTACGGAGATGCTTAA

Protein sequence

MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAAASGVGFPLEMSSGSYVPMAKPSQITHNLEQYGDA

Homology

[Close]

BLAST of Carg26318 vs. NCBI nr
Match: KAG7025068.1 (Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 459.5 bits (1181), Expect = 1.7e-125
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60
           MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60

Query: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120
           PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV
Sbjct: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120

Query: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180
           KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK
Sbjct: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180

Query: 181 TQVQSLERAATNRPLPDAAAAAAASGVGFPLEMSSGSYVPMAKPSQITHNLEQYGDA 238
           TQVQSLERAATNRPLPDAAAAAAASGVGFPLEMSSGSYVPMAKPSQITHNLEQYGDA
Sbjct: 181 TQVQSLERAATNRPLPDAAAAAAASGVGFPLEMSSGSYVPMAKPSQITHNLEQYGDA 237

[Close]

BLAST of Carg26318 vs. NCBI nr
Match: XP_023536625.1 (transcription factor HEC2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 452.6 bits (1163), Expect = 2.1e-123
Identity = 235/237 (99.16%), Postives = 236/237 (99.58%), Query Frame = 0


Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60
           MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60

Query: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120
           PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV
Sbjct: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120

Query: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180
           KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK
Sbjct: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180

Query: 181 TQVQSLERAATNRPLPDAAAAAAASGVGFPLEMSSGSYVPMAKPSQITHNLEQYGDA 238
           TQVQSLERAATNRPLPD AAAAAASGVGFPLEMSSGSYVPMAKPSQ+THNLEQYGDA
Sbjct: 181 TQVQSLERAATNRPLPD-AAAAAASGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 236

[Close]

BLAST of Carg26318 vs. NCBI nr
Match: XP_022936595.1 (transcription factor HEC2-like [Cucurbita moschata])

HSP 1 Score: 451.8 bits (1161), Expect = 3.6e-123
Identity = 235/240 (97.92%), Postives = 237/240 (98.75%), Query Frame = 0


Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60
           MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60

Query: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120
           PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV
Sbjct: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120

Query: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180
           KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK
Sbjct: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180

Query: 181 TQVQSLERAATNRPLPDAAAAAAAS---GVGFPLEMSSGSYVPMAKPSQITHNLEQYGDA 238
           TQVQSLERAATNRPLPDAAAAAAA+   GVGFPLEMSSGSYVPMAKPSQ+THNLEQYGDA
Sbjct: 181 TQVQSLERAATNRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 240

[Close]

BLAST of Carg26318 vs. NCBI nr
Match: XP_022975973.1 (transcription factor HEC2-like [Cucurbita maxima])

HSP 1 Score: 448.7 bits (1153), Expect = 3.0e-122
Identity = 233/237 (98.31%), Postives = 234/237 (98.73%), Query Frame = 0


Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60
           MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60

Query: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120
           PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV
Sbjct: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120

Query: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180
           KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK
Sbjct: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180

Query: 181 TQVQSLERAATNRPLPDAAAAAAASGVGFPLEMSSGSYVPMAKPSQITHNLEQYGDA 238
           TQVQSLERAATNRPLPD  AAA ASGVGFPLEMSSGSYVPMAKPSQ+THNLEQYGDA
Sbjct: 181 TQVQSLERAATNRPLPD--AAAPASGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 235

[Close]

BLAST of Carg26318 vs. NCBI nr
Match: KAG6591384.1 (Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 434.1 bits (1115), Expect = 7.7e-118
Identity = 225/227 (99.12%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 12  MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 71
           MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP
Sbjct: 1   MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 60

Query: 72  QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS 131
           QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS
Sbjct: 61  QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS 120

Query: 132 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT 191
           TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT
Sbjct: 121 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT 180

Query: 192 NRPLPD-AAAAAAASGVGFPLEMSSGSYVPMAKPSQITHNLEQYGDA 238
           NRPLPD AAAAAAASGVGFPLEMSSGSYVPMAKPSQ+THNLEQYGDA
Sbjct: 181 NRPLPDAAAAAAAASGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 227

[Close]

BLAST of Carg26318 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 6.3e-46
Identity = 122/216 (56.48%), Postives = 143/216 (66.20%), Query Frame = 0


Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSP-PSDH----FSSSTTDPHCLETLQQAA 60
           M+N D+       + MMMQQMEK+PE +++ +P P+ H     S S T P          
Sbjct: 1   MDNSDIL------MNMMMQQMEKLPEHFSNSNPNPNPHNIMMLSESNTHPFFFNPTH--- 60

Query: 61  ESSSPPFTNNLPYNLP----QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQ 120
             S  PF   +P++ P    +  P P+SS     GG +D     ++AAMREMIFRIAVMQ
Sbjct: 61  --SHLPFDQTMPHHQPGLNFRYAPSPSSSLPEKRGGCSD---NANMAAMREMIFRIAVMQ 120

Query: 121 PIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 180
           PI IDPE+VKPPKR+NV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE
Sbjct: 121 PIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 180

Query: 181 AIHYVKFLKTQVQSL-ERAATNRPLPDAAAAAAASG 207
           AIHYVKFLK QVQSL E A  N     A A  A +G
Sbjct: 181 AIHYVKFLKKQVQSLEEHAVVNGGGMTAVAGGALAG 202

[Close]

BLAST of Carg26318 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.6e-41
Identity = 119/213 (55.87%), Postives = 129/213 (60.56%), Query Frame = 0


Query: 16  MMMQQMEKIPEFYNHLSPPSDHFS--SSTTDPHCLETLQQAAESS---SPPF------TN 75
           MMM QMEK+PEF N   P S  FS   + T P    +    ++ S    P F        
Sbjct: 8   MMMHQMEKLPEFCN---PNSSFFSPDHNNTYPFLFNSTHYQSDHSMTNEPGFRYGSGLLT 67

Query: 76  NLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPK 135
           N     P T         RN+    +     ++AAMREMIFRIAVMQPI IDPEAVKPPK
Sbjct: 68  NPSSISPNTAYSSVFLDKRNNSNNNN--NGTNMAAMREMIFRIAVMQPIHIDPEAVKPPK 127

Query: 136 RRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 195
           RRNV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQ
Sbjct: 128 RRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQ 187

Query: 196 SLERAAT---------NRPLPDAAAAAAASGVG 209
           SLE  A           R L       AASG G
Sbjct: 188 SLEEQAVVTGGGGGGGGRVLIGGGGMTAASGGG 215

[Close]

BLAST of Carg26318 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31
Identity = 90/191 (47.12%), Postives = 110/191 (57.59%), Query Frame = 0


Query: 29  NHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLPQTVPFPTSSRWRNSGGE 88
           N+ +   DH      DP  +   Q        PF+++    L  ++   T         E
Sbjct: 24  NNNNKNDDHHHQHNNDPIGMAMDQYTQLHIFNPFSSSHFPPLSSSLTTTTLLSGDQEDDE 83

Query: 89  TDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISE 148
            + +    + AM+EM+++IA MQ + IDP  VK PKRRNV+IS DPQSVAARHRRERISE
Sbjct: 84  DEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISE 143

Query: 149 RIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLP---DAAAAAAAS 208
           RIRILQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L       P P    A+ A   S
Sbjct: 144 RIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTPPPPQDQASQAVTTS 203

Query: 209 GVGFPLEMSSG 217
            V  P   S G
Sbjct: 204 WVSPPPPPSFG 214

[Close]

BLAST of Carg26318 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-29
Identity = 75/135 (55.56%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 96  SVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQR 155
           ++A M+EMI+R A  +P+    E V+ PKR+NVKISTDPQ+VAAR RRERISE+IR+LQ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 156 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAAASG-VGFPLEMS 215
           LVPGGTKMDTASMLDEA +Y+KFL+ QV++LE     RP  D    + +S    FPL   
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENL---RPKLDQTNLSFSSAPTSFPL--F 360

Query: 216 SGSYVPMAKPSQITH 230
             S++P+  P+QI H
Sbjct: 361 HPSFLPLQNPNQIHH 370

[Close]

BLAST of Carg26318 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27
Identity = 64/100 (64.00%), Postives = 77/100 (77.00%), Query Frame = 0


Query: 88  ETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERIS 147
           + D +    + AM+EM + IAVMQP+ IDP  V  P RRNV+IS DPQ+V AR RRERIS
Sbjct: 76  DEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERIS 135

Query: 148 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 188
           E+IRIL+R+VPGG KMDTASMLDEAI Y KFLK QV+ L+
Sbjct: 136 EKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of Carg26318 vs. ExPASy TrEMBL
Match: A0A6J1FE54 (transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111443152 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.7e-123
Identity = 235/240 (97.92%), Postives = 237/240 (98.75%), Query Frame = 0


Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60
           MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60

Query: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120
           PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV
Sbjct: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120

Query: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180
           KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK
Sbjct: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180

Query: 181 TQVQSLERAATNRPLPDAAAAAAAS---GVGFPLEMSSGSYVPMAKPSQITHNLEQYGDA 238
           TQVQSLERAATNRPLPDAAAAAAA+   GVGFPLEMSSGSYVPMAKPSQ+THNLEQYGDA
Sbjct: 181 TQVQSLERAATNRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 240

[Close]

BLAST of Carg26318 vs. ExPASy TrEMBL
Match: A0A6J1IKS0 (transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111476512 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.5e-122
Identity = 233/237 (98.31%), Postives = 234/237 (98.73%), Query Frame = 0


Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60
           MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSP 60

Query: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120
           PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV
Sbjct: 61  PFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAV 120

Query: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180
           KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK
Sbjct: 121 KPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 180

Query: 181 TQVQSLERAATNRPLPDAAAAAAASGVGFPLEMSSGSYVPMAKPSQITHNLEQYGDA 238
           TQVQSLERAATNRPLPD  AAA ASGVGFPLEMSSGSYVPMAKPSQ+THNLEQYGDA
Sbjct: 181 TQVQSLERAATNRPLPD--AAAPASGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 235

[Close]

BLAST of Carg26318 vs. ExPASy TrEMBL
Match: A0A0A0L0B3 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639900 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.8e-81
Identity = 187/245 (76.33%), Postives = 194/245 (79.18%), Query Frame = 0


Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTD-PHCLETLQQAAESSS 60
           MENDDLKSEDQMEIMMMMQQMEKIPEFYN  SPPS  FSS+TTD PHC         SSS
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNDFSPPSSDFSSTTTDHPHC-----HLDSSSS 60

Query: 61  PPF---------TNNLPYNLPQ--TVPFP--TSSRWRNSGG-ETD-LQKQRSVAAMREMI 120
           PP          +NN PYN PQ  TVPFP  +SSRWRNSG  ET+ LQKQRSVAAMREMI
Sbjct: 61  PPLFINNNSNNNSNNPPYNFPQQSTVPFPGTSSSRWRNSGSCETESLQKQRSVAAMREMI 120

Query: 121 FRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180
           FRIAVMQPI IDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD
Sbjct: 121 FRIAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMD 180

Query: 181 TASMLDEAIHYVKFLKTQVQSLERAAT---NRPLPDAAAAAAASGVGFPLEMSSGSYVPM 227
           TASMLDEAIHYVKFLKTQVQSLERAA    NRP+       A S VGFPLEMS+GSY+P 
Sbjct: 181 TASMLDEAIHYVKFLKTQVQSLERAAVSAGNRPI---TGVGAPSSVGFPLEMSTGSYIPN 237

[Close]

BLAST of Carg26318 vs. ExPASy TrEMBL
Match: A0A1S3BU58 (transcription factor HEC2-like OS=Cucumis melo OX=3656 GN=LOC103493551 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.4e-80
Identity = 184/237 (77.64%), Postives = 189/237 (79.75%), Query Frame = 0


Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTD-PHCLETLQQAAESSS 60
           MENDDLKSEDQMEIMMMMQQMEKIPEFYN  SPPS  FSS+TTD PHC         SSS
Sbjct: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNDFSPPSSDFSSTTTDNPHC-----HLDSSSS 60

Query: 61  PPF-------TNNLPYNLPQ--TVPFP--TSSRWRNSGG-ETD-LQKQRSVAAMREMIFR 120
           PP         NN PYN PQ  TVPFP  + SRWRNSG  ET+ LQKQRSVAAMREMIFR
Sbjct: 61  PPLFINNNNSNNNPPYNFPQQSTVPFPGTSPSRWRNSGSCETESLQKQRSVAAMREMIFR 120

Query: 121 IAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 180
           IAVMQPI IDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTA
Sbjct: 121 IAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 180

Query: 181 SMLDEAIHYVKFLKTQVQSLERAAT---NRPLPDAAAAAAASGVGFPLEMSSGSYVP 221
           SMLDEAIHYVKFLKTQVQSLERAA    NRP+        A  VGFPLEMSSGSY+P
Sbjct: 181 SMLDEAIHYVKFLKTQVQSLERAAVSTGNRPI----TGGGAPSVGFPLEMSSGSYIP 228

[Close]

BLAST of Carg26318 vs. ExPASy TrEMBL
Match: A0A5A7V7R5 (Transcription factor HEC2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003280 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.9e-74
Identity = 173/226 (76.55%), Postives = 178/226 (78.76%), Query Frame = 0


Query: 12  MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTD-PHCLETLQQAAESSSPPF-------T 71
           MEIMMMMQQMEKIPEFYN  SPPS  FSS+TTD PHC         SSSPP         
Sbjct: 1   MEIMMMMQQMEKIPEFYNDFSPPSSDFSSTTTDNPHC-----HLDSSSSPPLFINNNNSN 60

Query: 72  NNLPYNLPQ--TVPFP--TSSRWRNSGG-ETD-LQKQRSVAAMREMIFRIAVMQPIQIDP 131
           NN PYN PQ  TVPFP  + SRWRNSG  ET+ LQKQRSVAAMREMIFRIAVMQPI IDP
Sbjct: 61  NNPPYNFPQQSTVPFPGTSPSRWRNSGSCETESLQKQRSVAAMREMIFRIAVMQPIHIDP 120

Query: 132 EAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 191
           EAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK
Sbjct: 121 EAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 180

Query: 192 FLKTQVQSLERAAT---NRPLPDAAAAAAASGVGFPLEMSSGSYVP 221
           FLKTQVQSLERAA    NRP+        A  VGFPLEMSSGSY+P
Sbjct: 181 FLKTQVQSLERAAVSTGNRPI----TGGGAPSVGFPLEMSSGSYIP 217

[Close]

BLAST of Carg26318 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 185.7 bits (470), Expect = 4.5e-47
Identity = 122/216 (56.48%), Postives = 143/216 (66.20%), Query Frame = 0


Query: 1   MENDDLKSEDQMEIMMMMQQMEKIPEFYNHLSP-PSDH----FSSSTTDPHCLETLQQAA 60
           M+N D+       + MMMQQMEK+PE +++ +P P+ H     S S T P          
Sbjct: 1   MDNSDIL------MNMMMQQMEKLPEHFSNSNPNPNPHNIMMLSESNTHPFFFNPTH--- 60

Query: 61  ESSSPPFTNNLPYNLP----QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQ 120
             S  PF   +P++ P    +  P P+SS     GG +D     ++AAMREMIFRIAVMQ
Sbjct: 61  --SHLPFDQTMPHHQPGLNFRYAPSPSSSLPEKRGGCSD---NANMAAMREMIFRIAVMQ 120

Query: 121 PIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 180
           PI IDPE+VKPPKR+NV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE
Sbjct: 121 PIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 180

Query: 181 AIHYVKFLKTQVQSL-ERAATNRPLPDAAAAAAASG 207
           AIHYVKFLK QVQSL E A  N     A A  A +G
Sbjct: 181 AIHYVKFLKKQVQSLEEHAVVNGGGMTAVAGGALAG 202

[Close]

BLAST of Carg26318 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-42
Identity = 119/213 (55.87%), Postives = 129/213 (60.56%), Query Frame = 0


Query: 16  MMMQQMEKIPEFYNHLSPPSDHFS--SSTTDPHCLETLQQAAESS---SPPF------TN 75
           MMM QMEK+PEF N   P S  FS   + T P    +    ++ S    P F        
Sbjct: 8   MMMHQMEKLPEFCN---PNSSFFSPDHNNTYPFLFNSTHYQSDHSMTNEPGFRYGSGLLT 67

Query: 76  NLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPK 135
           N     P T         RN+    +     ++AAMREMIFRIAVMQPI IDPEAVKPPK
Sbjct: 68  NPSSISPNTAYSSVFLDKRNNSNNNN--NGTNMAAMREMIFRIAVMQPIHIDPEAVKPPK 127

Query: 136 RRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 195
           RRNV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQ
Sbjct: 128 RRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQ 187

Query: 196 SLERAAT---------NRPLPDAAAAAAASGVG 209
           SLE  A           R L       AASG G
Sbjct: 188 SLEEQAVVTGGGGGGGGRVLIGGGGMTAASGGG 215

[Close]

BLAST of Carg26318 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 8.2e-33
Identity = 90/191 (47.12%), Postives = 110/191 (57.59%), Query Frame = 0


Query: 29  NHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLPQTVPFPTSSRWRNSGGE 88
           N+ +   DH      DP  +   Q        PF+++    L  ++   T         E
Sbjct: 24  NNNNKNDDHHHQHNNDPIGMAMDQYTQLHIFNPFSSSHFPPLSSSLTTTTLLSGDQEDDE 83

Query: 89  TDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISE 148
            + +    + AM+EM+++IA MQ + IDP  VK PKRRNV+IS DPQSVAARHRRERISE
Sbjct: 84  DEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISE 143

Query: 149 RIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLP---DAAAAAAAS 208
           RIRILQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L       P P    A+ A   S
Sbjct: 144 RIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTPPPPQDQASQAVTTS 203

Query: 209 GVGFPLEMSSG 217
            V  P   S G
Sbjct: 204 WVSPPPPPSFG 214

[Close]

BLAST of Carg26318 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.0e-30
Identity = 75/135 (55.56%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 96  SVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQR 155
           ++A M+EMI+R A  +P+    E V+ PKR+NVKISTDPQ+VAAR RRERISE+IR+LQ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 156 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAAASG-VGFPLEMS 215
           LVPGGTKMDTASMLDEA +Y+KFL+ QV++LE     RP  D    + +S    FPL   
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENL---RPKLDQTNLSFSSAPTSFPL--F 360

Query: 216 SGSYVPMAKPSQITH 230
             S++P+  P+QI H
Sbjct: 361 HPSFLPLQNPNQIHH 370

[Close]

BLAST of Carg26318 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 124.8 bits (312), Expect = 9.3e-29
Identity = 64/100 (64.00%), Postives = 77/100 (77.00%), Query Frame = 0


Query: 88  ETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERIS 147
           + D +    + AM+EM + IAVMQP+ IDP  V  P RRNV+IS DPQ+V AR RRERIS
Sbjct: 76  DEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERIS 135

Query: 148 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 188
           E+IRIL+R+VPGG KMDTASMLDEAI Y KFLK QV+ L+
Sbjct: 136 EKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

The following BLAST results are available for this feature:

BLAST of Carg26318 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025068.1	1.7e-125	100.00	Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023536625.1	2.1e-123	99.16	transcription factor HEC2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022936595.1	3.6e-123	97.92	transcription factor HEC2-like [Cucurbita moschata]	[more]
XP_022975973.1	3.0e-122	98.31	transcription factor HEC2-like [Cucurbita maxima]	[more]
KAG6591384.1	7.7e-118	99.12	Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Carg26318 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SND4	6.3e-46	56.48	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q9FHA7	1.6e-41	55.87	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9LXD8	1.1e-31	47.12	Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1	[more]
Q8S3D2	1.4e-29	55.56	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]
O81313	1.3e-27	64.00	Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3	[more]

BLAST of Carg26318 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FE54	1.7e-123	97.92	transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111443152 PE=...	[more]
A0A6J1IKS0	1.5e-122	98.31	transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111476512 PE=4 ...	[more]
A0A0A0L0B3	2.8e-81	76.33	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639900 PE=4 S...	[more]
A0A1S3BU58	2.4e-80	77.64	transcription factor HEC2-like OS=Cucumis melo OX=3656 GN=LOC103493551 PE=4 SV=1	[more]
A0A5A7V7R5	1.9e-74	76.55	Transcription factor HEC2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Carg26318 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50330.1	4.5e-47	56.48	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	1.1e-42	55.87	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	8.2e-33	47.12	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	1.0e-30	55.56	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	9.3e-29	64.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 136..185 e-value: 1.4E-13 score: 61.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 140..179 e-value: 1.5E-6 score: 28.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 130..179 score: 15.217952
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 133..196 e-value: 1.8E-12 score: 49.2
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 135..188
None	No IPR available	PANTHER	PTHR45914:SF29	BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN	coord: 1..227
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 1..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26318-RA	Carg26318-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity