Carg26274 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg26274
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ribosomal protein
Location	Carg_Chr18: 7393529 .. 7395895 (+)
RNA-Seq Expression	Carg26274
Synteny	Carg26274

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTCTGTTTGTGCACAGGACTGAAGTGTAGAGCATCTTTGCGAAGGCGAAGATTCGAATATGAGGTTTGTTTTACAGCATTTTCTTTGGTTTGGATATCTGTTTTGTTTTCTGATTTATGTCTGTATATGAATTTTAGCTAGTTATGATGGATGGACACACGTTATTTACTTTCTTCGATTCTACTGTTTTGAGTTTTTTGGTGGCTGGTCTTTGGAATTATCGATTCTGGATAATTTAATCTACCATCTCGAGTATTGTGATGTTTTGAGAATGTTATGGATGGATCATATTTAGGAAGTAGGTTTGCATTCATGTGCTTCTTTTAAAATTTCAGCGTAGCATCGTTTTGATTATACCTAGTGTTTGGGGGTCTTATTTTGTAATCATTTCTTTCTACAGTAAGCTTCAGAGTGAGGCATTGAGAGAAGCTATCTCATCTATCTTCACTGATAGCAATGAGAAAAAGAGAAATTTTACTGAGACCATTGAGCTTCAGATCGGGCTGAAGAACTATGACCCTCAAAAGGACAAGCGTTTCAGTGGCTCTGTGAAGTTGCCGCACATTCCCCGTCCCAAGATGAAGCTTTGCATGCTTGGAGACGCCTTGCACGTTGAGGAGGTAATTTTACTTTCTAAATTTTAAAACAATTCTTTTTGCAACCCATAGTAATTTATTTTCTAATGTTCAAAATTTGGAACTTGGCATATTTATGGTTGTCTAATCAAATTTAATTTTATCCTATCTGTTAATATGTTCTCTGTTCCTGTACTCATACTGTTTAAGGATTTCTGGTGCGTATGAGCCTAAATACCAGCGTTTCCAATGATTTGATCTCAGTTCATGACCACTTTTCGGTATTGTGGTTGTTTATTAAGTAGATCATTTGATGCCTATCAATGCACTGGTTCTACCTGTATTTAGTTTTCCATATGCTTAGAGGACATATCCTGACAGGGTTTCATTAAAATATATTTCAGGCCGAAAAGATTGGTCTAGACTACATGGATGTGGAAGGCTTGAAGAAGCTAAACAAGAACAAGAAATTGGTGAAGAAGCTTGCCAAGAAATACCATGCCTTTTTGGCATCTGAGGCTGTAATTAAGCAGATCCCACGTCTTCTCGGCCCTGGTCTCAACAAAGCAGGCAAGAACATTCATTAAACATACTGTTTTACTGTTTTTCTTTACGAAATTGTATAATTGATAACCTCCTGAAAACTCTATCCTTGTTTATGTTTCACAGAAATGAAGGTAGTCAAAGCTAGATCTTTTATCGGCTCGTATTATATGCTAATTCTGATTCCTCCACCCTTTTTACCATTCCAGGAAAGTTCCCAACATTGGTGACACACCAAGAATCGCTGGAATCGAAAGTTAACGAGACCAAGGCAATGGTCAAATTTCAACTTAAGAAGGTTCTTTGCATGGGGGTTGCCGTTGGGAATGTTGCCATGGAGGAGAAGCAAGTCTTCCAAAACGTGCAAATGAGCGTTAATTTCCTGGTTTCGTTGTTGAAGAAGAACTGGCAGAACGTAAGTTCCATCTCGGTTCTTGCATTAAACTTGAACTTGATCTGTTTTATCATTTTCACTCATGGCTATTGCTTGTTTCTTGCAGGTTAGGTGCCTGTACCTGAAGAGCACAATGGGGAAGTCGTACCGGGTTTTCTAAGCTCTGTTAGGAAACTTGTCAATCTTGTGTTCGTTCCTTTTATTGTTGAAGTTATTTTCTCGAAGAGCAGTTTTGTGAATTGAGCGTTTTTGGATATGATTCTTGAACAAAGAAACAAAGATGCGTTTTCTCTAAATAGTGAACTTTTGATAATGAAACTTCTATTCATACTAACCCAACCCACATCGTGTCGTTTGATCACATGATTTGTTGCATTTACTGCGGCTGGTGGTATTACAAGTTTTGGTATCTTGCCTCTATATTTCATATCAATCATTTGGAAGTGCTCAAATCACTGTGGGCTTTAGACTGTTGTATGGTTGTTTGTGATTTTAAAACTTCTCTATTATAGAGAGTGTCTAGCCGTACTCTATTGAGTGTCGTGGATGTTTATTTGGTTTTGGTACCATTAGTAATGGTCTAAATTTATTACTAGTAAATATTGTCTTTGGGTCTACTATTACTCTGTTGAGTGCCATGGACGGTGATTTGGTTTTGATATTTTGATACTATTGTTAGTGGATATTGTTCTTCCTGAAATGGTTTTCACACTCTTGTAGTTCTCAATTGATGTTGGATGTCACAACTCACTTTTCGACCTTATGTGGTGGGTTTTTTATGCCCTTTTTTTAGGTTGGGTTGTTGGATACGGGATCCTCATAGTAAGCTGGACCAACATCCAGCCAAGATAGG

mRNA sequence

AACTCTGTTTGTGCACAGGACTGAAGTGTAGAGCATCTTTGCGAAGGCGAAGATTCGAATATGAGTAAGCTTCAGAGTGAGGCATTGAGAGAAGCTATCTCATCTATCTTCACTGATAGCAATGAGAAAAAGAGAAATTTTACTGAGACCATTGAGCTTCAGATCGGGCTGAAGAACTATGACCCTCAAAAGGACAAGCGTTTCAGTGGCTCTGTGAAGTTGCCGCACATTCCCCGTCCCAAGATGAAGCTTTGCATGCTTGGAGACGCCTTGCACGTTGAGGAGGCCGAAAAGATTGGTCTAGACTACATGGATGTGGAAGGCTTGAAGAAGCTAAACAAGAACAAGAAATTGGTGAAGAAGCTTGCCAAGAAATACCATGCCTTTTTGGCATCTGAGGCTGTAATTAAGCAGATCCCACGTCTTCTCGGCCCTGGTCTCAACAAAGCAGGAAAGTTCCCAACATTGGTGACACACCAAGAATCGCTGGAATCGAAAGTTAACGAGACCAAGGCAATGGTCAAATTTCAACTTAAGAAGGTTCTTTGCATGGGGGTTGCCGTTGGGAATGTTGCCATGGAGGAGAAGCAAGTCTTCCAAAACGTGCAAATGAGCGTTAATTTCCTGGTTTCGTTGTTGAAGAAGAACTGGCAGAACGTTAGGTGCCTGTACCTGAAGAGCACAATGGGGAAGTCGTACCGGGTTTTCTAAGCTCTGTTAGGAAACTTGTCAATCTTGTGTTCGTTCCTTTTATTGTTGAAGTTATTTTCTCGAAGAGCAGTTTTGTGAATTGAGCGTTTTTGGATATGATTCTTGAACAAAGAAACAAAGATGCGTTTTCTCTAAATAGTGAACTTTTGATAATGAAACTTCTATTCATACTAACCCAACCCACATCGTGTCGTTTGATCACATGATTTGTTGCATTTACTGCGGCTGGTGGTATTACAAGTTTTGGTATCTTGCCTCTATATTTCATATCAATCATTTGGAAGTGCTCAAATCACTGTGGGCTTTAGACTGTTGTATGGTTGTTTGTGATTTTAAAACTTCTCTATTATAGAGAGTGTCTAGCCGTACTCTATTGAGTGTCGTGGATGTTTATTTGGTTTTGGTACCATTAGTAATGGTCTAAATTTATTACTAGTAAATATTGTCTTTGGGTCTACTATTACTCTGTTGAGTGCCATGGACGGTGATTTGGTTTTGATATTTTGATACTATTGTTAGTGGATATTGTTCTTCCTGAAATGGTTTTCACACTCTTGTAGTTCTCAATTGATGTTGGATGTCACAACTCACTTTTCGACCTTATGTGGTGGGTTTTTTATGCCCTTTTTTTAGGTTGGGTTGTTGGATACGGGATCCTCATAGTAAGCTGGACCAACATCCAGCCAAGATAGG

Coding sequence (CDS)

ATGAGTAAGCTTCAGAGTGAGGCATTGAGAGAAGCTATCTCATCTATCTTCACTGATAGCAATGAGAAAAAGAGAAATTTTACTGAGACCATTGAGCTTCAGATCGGGCTGAAGAACTATGACCCTCAAAAGGACAAGCGTTTCAGTGGCTCTGTGAAGTTGCCGCACATTCCCCGTCCCAAGATGAAGCTTTGCATGCTTGGAGACGCCTTGCACGTTGAGGAGGCCGAAAAGATTGGTCTAGACTACATGGATGTGGAAGGCTTGAAGAAGCTAAACAAGAACAAGAAATTGGTGAAGAAGCTTGCCAAGAAATACCATGCCTTTTTGGCATCTGAGGCTGTAATTAAGCAGATCCCACGTCTTCTCGGCCCTGGTCTCAACAAAGCAGGAAAGTTCCCAACATTGGTGACACACCAAGAATCGCTGGAATCGAAAGTTAACGAGACCAAGGCAATGGTCAAATTTCAACTTAAGAAGGTTCTTTGCATGGGGGTTGCCGTTGGGAATGTTGCCATGGAGGAGAAGCAAGTCTTCCAAAACGTGCAAATGAGCGTTAATTTCCTGGTTTCGTTGTTGAAGAAGAACTGGCAGAACGTTAGGTGCCTGTACCTGAAGAGCACAATGGGGAAGTCGTACCGGGTTTTCTAA

Protein sequence

MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF

Homology

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BLAST of Carg26274 vs. NCBI nr
Match: XP_022945884.1 (60S ribosomal protein L10a [Cucurbita moschata] >XP_023541044.1 60S ribosomal protein L10a [Cucurbita pepo subsp. pepo] >KAG6573621.1 60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012702.1 60S ribosomal protein L10a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419.1 bits (1076), Expect = 2.3e-113
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Carg26274 vs. NCBI nr
Match: XP_022967120.1 (60S ribosomal protein L10a [Cucurbita maxima])

HSP 1 Score: 417.9 bits (1073), Expect = 5.2e-113
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIFTDSN+KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNDKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Carg26274 vs. NCBI nr
Match: XP_022932197.1 (60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022970262.1 60S ribosomal protein L10a-like [Cucurbita maxima] >XP_023520953.1 60S ribosomal protein L10a-like [Cucurbita pepo subsp. pepo] >KAG6583662.1 60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019322.1 60S ribosomal protein L10a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 416.0 bits (1068), Expect = 2.0e-112
Identity = 214/216 (99.07%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIFTDSNEKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Carg26274 vs. NCBI nr
Match: XP_022943718.1 (60S ribosomal protein L10a [Cucurbita moschata] >XP_022943719.1 60S ribosomal protein L10a [Cucurbita moschata] >XP_022985885.1 60S ribosomal protein L10a [Cucurbita maxima] >XP_022985886.1 60S ribosomal protein L10a [Cucurbita maxima] >XP_023513214.1 60S ribosomal protein L10a [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.5 bits (1059), Expect = 2.2e-111
Identity = 212/216 (98.15%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIF DS+EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Carg26274 vs. NCBI nr
Match: XP_022958674.1 (60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022995143.1 60S ribosomal protein L10a-like [Cucurbita maxima] >XP_023532799.1 60S ribosomal protein L10a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.1 bits (1058), Expect = 2.9e-111
Identity = 212/216 (98.15%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIF DS EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKLCMLGDALHVEEAEKIG+DYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Carg26274 vs. ExPASy Swiss-Prot
Match: B8B9K6 (60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 6.0e-104
Identity = 191/216 (88.43%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSE L+EAIS +  +S EK R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           N+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 NIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of Carg26274 vs. ExPASy Swiss-Prot
Match: B7F845 (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 6.0e-104
Identity = 191/216 (88.43%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSE L+EAIS +  +S EK R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           N+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 NIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of Carg26274 vs. ExPASy Swiss-Prot
Match: P59231 (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.1e-102
Identity = 194/217 (89.40%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNE-KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQSEA+REAISSI T   E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 120
           PKMK+CMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE+VIKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Carg26274 vs. ExPASy Swiss-Prot
Match: Q8VZB9 (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.5e-102
Identity = 191/216 (88.43%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI++I   S  KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Carg26274 vs. ExPASy Swiss-Prot
Match: P59230 (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.3e-101
Identity = 189/216 (87.50%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI++I   S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Carg26274 vs. ExPASy TrEMBL
Match: A0A6J1G271 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111449992 PE=3 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.1e-113
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Carg26274 vs. ExPASy TrEMBL
Match: A0A6J1HTI9 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111466620 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.5e-113
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIFTDSN+KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNDKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Carg26274 vs. ExPASy TrEMBL
Match: A0A6J1HYM1 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111469275 PE=3 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 9.6e-113
Identity = 214/216 (99.07%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIFTDSNEKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Carg26274 vs. ExPASy TrEMBL
Match: A0A6J1EVZ1 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111438515 PE=3 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 9.6e-113
Identity = 214/216 (99.07%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIFTDSNEKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Carg26274 vs. ExPASy TrEMBL
Match: A0A6J1JCI3 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111483802 PE=3 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 212/216 (98.15%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIF DS+EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Carg26274 vs. TAIR 10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 374.0 bits (959), Expect = 8.0e-104
Identity = 194/217 (89.40%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNE-KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQSEA+REAISSI T   E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 120
           PKMK+CMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE+VIKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Carg26274 vs. TAIR 10
Match: AT5G22440.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 374.0 bits (959), Expect = 8.0e-104
Identity = 194/217 (89.40%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNE-KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQSEA+REAISSI T   E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 120
           PKMK+CMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE+VIKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Carg26274 vs. TAIR 10
Match: AT1G08360.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 373.6 bits (958), Expect = 1.1e-103
Identity = 191/216 (88.43%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI++I   S  KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Carg26274 vs. TAIR 10
Match: AT2G27530.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 370.5 bits (950), Expect = 8.9e-103
Identity = 189/216 (87.50%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI++I   S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Carg26274 vs. TAIR 10
Match: AT2G27530.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 370.5 bits (950), Expect = 8.9e-103
Identity = 189/216 (87.50%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI++I   S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

The following BLAST results are available for this feature:

BLAST of Carg26274 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945884.1	2.3e-113	100.00	60S ribosomal protein L10a [Cucurbita moschata] >XP_023541044.1 60S ribosomal pr...	[more]
XP_022967120.1	5.2e-113	99.54	60S ribosomal protein L10a [Cucurbita maxima]	[more]
XP_022932197.1	2.0e-112	99.07	60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022970262.1 60S ribosom...	[more]
XP_022943718.1	2.2e-111	98.15	60S ribosomal protein L10a [Cucurbita moschata] >XP_022943719.1 60S ribosomal pr...	[more]
XP_022958674.1	2.9e-111	98.15	60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022995143.1 60S ribosom...	[more]

BLAST of Carg26274 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8B9K6	6.0e-104	88.43	60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3...	[more]
B7F845	6.0e-104	88.43	60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE...	[more]
P59231	1.1e-102	89.40	60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=...	[more]
Q8VZB9	1.5e-102	88.43	60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=...	[more]
P59230	1.3e-101	87.50	60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=...	[more]

BLAST of Carg26274 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G271	1.1e-113	100.00	Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111449992 PE=3 SV=1	[more]
A0A6J1HTI9	2.5e-113	99.54	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111466620 PE=3 SV=1	[more]
A0A6J1HYM1	9.6e-113	99.07	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111469275 PE=3 SV=1	[more]
A0A6J1EVZ1	9.6e-113	99.07	Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111438515 PE=3 SV=1	[more]
A0A6J1JCI3	1.1e-111	98.15	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111483802 PE=3 SV=1	[more]

BLAST of Carg26274 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22440.1	8.0e-104	89.40	Ribosomal protein L1p/L10e family	[more]
AT5G22440.2	8.0e-104	89.40	Ribosomal protein L1p/L10e family	[more]
AT1G08360.1	1.1e-103	88.43	Ribosomal protein L1p/L10e family	[more]
AT2G27530.1	8.9e-103	87.50	Ribosomal protein L1p/L10e family	[more]
AT2G27530.2	8.9e-103	87.50	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 23..210 e-value: 1.6E-42 score: 145.6
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 9..215 e-value: 3.06959E-62 score: 190.858
IPR002143	Ribosomal protein L1	PIRSF	PIRSF002155	RPL1p_RPL1a_RPL10e_RPL1o	coord: 1..216 e-value: 1.4E-47 score: 159.9
None	No IPR available	GENE3D	3.30.190.20		coord: 20..211 e-value: 1.8E-60 score: 205.9
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 2..214
None	No IPR available	PANTHER	PTHR23105:SF164	60S RIBOSOMAL PROTEIN L10A-3	coord: 2..214
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 65..154 e-value: 1.8E-60 score: 205.9
IPR023673	Ribosomal protein L1, conserved site	PROSITE	PS01199	RIBOSOMAL_L1	coord: 116..135
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 21..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26274-RA	Carg26274-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome