![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Carg26252 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAACGCGTGACCATGGAGAGAGAAAATTCCTGGAATATCTGATATTCGGGCGTCCACCTCGCGCCAACGGGGTAGGAAATCTAGGTGCCTGCTGCGGTTGTGTATCAATCCAAGGAATTTCCGAACGATTGCTTGATTGCAGTTGTTGGGATTCAAGCCGGCTTGGTCTCAACAACTCCATGGATCTCAGATTCTGAGCAACGGGGATTTCTAAAGACTTGGTACCACAAGCGGCCTCACAGGACGATCAGCCGTTTTGAGTCTCATTTTGGGGGTTATTTGCTGGAAGATTTCGATTACGTCATTGAATTGGTTGGTATCTGGCCGGCGGTTCAGCCGCTGGAGTGGTTGTTCGCATTTTTATTTTTATTTTTTGTGTAGTTTTCTGGATTTACGATGGCTTTCTCGATGATCCCGTTGCTGAACGGAGAGAGAGCTGTGGTTCTTTTCTTCATCACCAGCGTCTTGGTTTCTCTCCCGTTCTCCCTCCTCTATCATGGTCTTGCTCTCTCTCTGCTTACCCTGTCCGCTCTTTGCATCGAAATCCAAGCAGAGAGTTCCAATTCTCTTCATCAATTTAAGACCAGGTACCTTATTTTTCTTTTCTTTCTAATTCATCGAATTCTCGCTTTAGACTATATGGTTGCTTGCACGTACTCTAATTTAGAACGTTTAATAACGTCTCTGGTCAGTTTTCCAGTTGTTGTCTCCTGATCTCTGGATGTTGCTTGGGAAATTTAGTAATATGAATGTGTTGGACCTCGAATTGTGAAAGCTTGAATATGAGAGAAGGGGTAAAACGTAGGATAGACTATACACGTATACAGTAGGTATGATGTAACTGTGAGGGTGTTGGATTTTGCAAGTGTTTTGAATGAGGGAGAAATGGCTGGCGTATATGATTCTTGTATGGCATGTTTGTCTCCTTTTATCTACTTAATAGAAGATTACCAATGTACCTATCAATTAGGTGTCTGAGCACGTTTTGAAATGGAAGAGCGAAATGACGTAGAGGAAGTCGAGGACCAGAAACCATGGGAGACGACGGAAAAGGAAATGGGAGAAGGGAACTGTGATGCCTTTCGGGACTACTGTGAACATTAAAACACCTAGTGCAAAATATATCAAGAGTTATTTCTATCTTGGATGACACACAAGACCATGGTGGCTATAGGCTCTGAACACTCTTGGGGAAAACATAAGGTTATCGAACATTGGATTGGGGGAGCTCAATTTTAGGATAGGGAGGAGAGATATGCGTATTTGGAGCCCTAACTCTTTAGTGGTTTCACTTGTAGTTTCTTCTTTTGATGTTTGTTGGACCTTTCTCACGATAGGGATTTTGTTTTTTCAAAGAAGGTTAAATTCTTTGTCTGGCAAGTTACCTATTGTCGTGTTAACACTTTAGATAGGATCTTGAGAAAGTGGCCTTTGTTGATTGGCCCATTTTGGTGTATTCTTTGTCGGAAGGTAGAGGAAGACTGGGATCCTTTCCTTTTGAGATGCGACTTTGTGCACTCTATGTGGTATTATTTTTTTTGGAGGCGTTTGGCTTTCAGTTAGCTCACCATAGAGACTTGAAGGGGATGATCAAAGAGTTTCTTCTTTCGCCTTTTAGAGAAGGTCGTTTCTTGTGGCTTGACTGTGTACTTTACTATGGGACCTTTGGGAAGAGAGGAACAACAAATTGTTAGGTGTTTGGACAGATGATATCCTAGTGATGTTTGGTCCCTTGTTAAATTTTATGTCTCTCTTTGGGCTTCCATACGAAAGATTTTTGTAATTACTCGAAAAGCCTATCTTACAGGTTTGAAGACCTTCAGTGGCCTTCCATTTTGTGGGCTTCCTGTTTGGATGCTCGGTGTAATCTTGTATTTTTTTTCTCAATGAAAGGTTTTTTTTTTCTCAATGAAAATTTATTGTTTTTTTTCCTTTTTTTTTAAAAATAATTCAACAAGTGAGGGTGGGGGCATTTGAATCTTTGACCTCTTTGTCGAGGGGATATGTTTAAATCAGTTGAATTACACTTATGTTAGCTTTTTTTGTCATATAGTACTATGTATGTCTATTTATTCTGCTCAGTAATTGTTCAATACATGCCTAAGAAGTCTCAGCCTCATATTCAATTTATACAATTAGTTTCTAACACGTTGATTGTGCTAGCTAGTGTCTGACACATGTTCAACAAGTATCAAAGTGCTGGAATATCCAATCCGTATTGGATAAGGACACTTTAACCTAACTAAAATATTTGGGCTTCTTGAACATGCAATATAATTCTATATTAACTAACTTTAGAGGTTACATTTCTCTTTTTACGCCCTTATCTTGTAAATTTTCACTACGGGAGACCCAACCCATGTAAATGGATATTTTGTCATCTAGCTAAGTTTCAAGAGATCTTCTGTTATTCTTTTATTGCTCTTGTAGATTTGAATTCCCAATACTATTAAATTTATTTTAACTTTTACTGGAAGTGTGGTCTTTATGGTCAACGCAATGACTTTGTTCAATGATCTATTTTCTTATGTTGTCAATTTTGCTATATCAATGATTTTCAATTGCCATTTTCCGTAGGCCAGGTGCTTCATCAGGAATACTATTAGGAGCAATTACACTTCCTGCTGTAATGCTTGCTAAGATGATTCAGCTTACTAGAGCTTTCTCATCCAATCACACCGGACTTGAGGGTATGGAGTTTCTAAATAAACAGTGACTATGATTGGCATTATTTCTTAAAGCTCTCTTAATTTAGTTGTTGGTACTGGAACTAAGCCCTTTTGTTCTTATTATTGGTTAATGACCACCAGGACTTTTTTAATTTATGTATTCAGAGATTGAAACTTGGACTATGCACTTTTGGTCAACTTCAACCTGCTGTTTGAGTGTGCTTATGCTTCTCTGGAATGCTATGCATGAGTCTGATGTTGTTTCACAAACACGTTTCCATCGTCTTTGGAGGTTGAAGCTTGGTTTGGGTTGTAAGATCCTATATGGTGTTGTGTGCTATAGTTCCTTAGCAACAATGTATCCGAATGGTAACTAAATTTGCTTCTTGTGAATTCTTTCTTTTCTTTCTCATAAACTAAAATGATTTTTTTCCTTGGTTAGGTCAGAAATAGAATGGAGAAAAATCTGCAGAATTTTTTTGTTGAGTTTTTGAATTCATGTTTCAATACTTATTTTTGTTCTTTCTTCTGATTTCTCTTCAATCAGTTGTCCGCATGGCTCTTATGTCGTCGTGGATACTCTGTCATGGGTTGGTTGCTTCCAAATTGATTCAGCATCTTCTTAGTACCTTTCCATCTTGTGCTTCCATTGGTACGTGTTGTATGCCTCTTTTCTTTTTGTAGTAGATGGTTTTAATTTCTTTGGTATTTGAGAAAAACTAAAGTCACTACATTGTAACTTGTTTTCATTAATTAAAATGATCAACCATGGCAAGGCAGAAATTATTCAGAAAATTTGATGTCATATTTATCTCCAATGGGAACAAATGTAAATGTTTTCAATGATTAGCTGGTTAATATCATTTCCTAAATATGCTGTGTTCTACTTCTAACTGACCTCCAGAAGCCCAATAAATTGCTTTAATTTTTCTGTGGTCCAGATTCCACAAGTTGTTAAGATCACAAGCCAAACTTATGATTTTTTTAATGTTTAAATCAAATTTCTTTCACGGGCTTACTTCTTCAATGGTAGTGGCATCTTCTTATAGGGGAAGCGCTATTGGTTACGGCTGGACTTGTTCTCTACTTTGGTGACATGCTAGGATGTACTATTGCTAAGGTTTGTAGGGTATATATTTTCCTTGGAATATAACTGTTGCATATATATTTAATAAGAGATTGGTTGGAGCAGATGCTTGGGGCTCTTAGTTCGTCAGAATTGGTTTCTTTTCAGTATATGATGAACAGAAGTGAGATTAGTCCCATAATTCAGGTTTACATCTTGTTTGTGGAAGCTGATTCACATTTTTTTGTCTCAGTAATTCACATATTTTACTCTCTTTGGGGATTAACATGGTTATTCCAACATGTAGGGTCTGCTGCTTGGCCTTCTTCTGTGCCCAGTGGTCTTTAAACATCTCCACCGATGGGAATGCATTGTGAACACTGAAAACTCTGAAGCTAAGAAATACTTTGAGATCAGAAGATCTATGATATTTTTTGCCGTCCTCGGATTCATTTCGATCGTGGTCGTCCCATCATGGATGATGTTAGTTCATGAATTTGACACACATCCTTTCTTATGGTATGAAATCCATTGGAATTTTGAATTCAGTTTATTGAAAATTTTAGTTTTTTTACTTACTCTCATAAGTCTTTATAAAAATTGTTAAAGTAGATTCATTGACCTAATTGGAGCATATTTTGTCATGTCAACTCTTTATGCTTATCCATATAATTGACTTTCTGTCAGGGTCATATCCTTTACATTTTCAGAACCAGTTAAAAGACTATCTTTATGCGTCTACTGGTTGTCTCTTATATGTGCATCTATTCTGCGGTTCTACAATATCTCAAGAAGTAGCAAGATCGAGAGAATTCTTCTTCGTAAATACTATCATCTCATGGCTGTTTTGATGTTTCTTCCTGCACTTATCTTTCAGGTAAACTTGCTCTAATTATTGATGCTTAGTTGCTACGATAATTTCTTCTCTAGTCAAAACAATGCTGGCATTCTGGATTAGGTGTGTCTAGATTCTGAAAAGTATTTCGATTTTTTTTTTCAGCCAAGGTTTCTCAATCTAGCCTTTGGTGCAGCTTTGGCAGTTTTCTTGGCATTAGAAATTATTCGAGTAAGTTAA ATGGGAACGCGTGACCATGGAGAGAGAAAATTCCTGGAATATCTGATATTCGGGCGTCCACCTCGCGCCAACGGGTTTTCTGGATTTACGATGGCTTTCTCGATGATCCCGTTGCTGAACGGAGAGAGAGCTGTGGTTCTTTTCTTCATCACCAGCGTCTTGGTTTCTCTCCCGTTCTCCCTCCTCTATCATGGTCTTGCTCTCTCTCTGCTTACCCTGTCCGCTCTTTGCATCGAAATCCAAGCAGAGAGTTCCAATTCTCTTCATCAATTTAAGACCAGGCCAGGTGCTTCATCAGGAATACTATTAGGAGCAATTACACTTCCTGCTGTAATGCTTGCTAAGATGATTCAGCTTACTAGAGCTTTCTCATCCAATCACACCGGACTTGAGGAGATTGAAACTTGGACTATGCACTTTTGGTCAACTTCAACCTGCTGTTTGAGTGTGCTTATGCTTCTCTGGAATGCTATGCATGAGTCTGATGTTGTTTCACAAACACGTTTCCATCGTCTTTGGAGGTTGAAGCTTGGTTTGGGTTGTAAGATCCTATATGGTGTTGTGTGCTATAGTTCCTTAGCAACAATGTATCCGAATGTTGTCCGCATGGCTCTTATGTCGTCGTGGATACTCTGTCATGGGTTGGTTGCTTCCAAATTGATTCAGCATCTTCTTAGTACCTTTCCATCTTGTGCTTCCATTGGGGAAGCGCTATTGGTTACGGCTGGACTTGTTCTCTACTTTGGTGACATGCTAGGATGTACTATTGCTAAGATGCTTGGGGCTCTTAGTTCGTCAGAATTGGTTTCTTTTCAGTATATGATGAACAGAAGTGAGATTAGTCCCATAATTCAGGGTCTGCTGCTTGGCCTTCTTCTGTGCCCAGTGGTCTTTAAACATCTCCACCGATGGGAATGCATTGTGAACACTGAAAACTCTGAAGCTAAGAAATACTTTGAGATCAGAAGATCTATGATATTTTTTGCCGTCCTCGGATTCATTTCGATCGTGGTCGTCCCATCATGGATGATGTTAGTTCATGAATTTGACACACATCCTTTCTTATGGGTCATATCCTTTACATTTTCAGAACCAGTTAAAAGACTATCTTTATGCGTCTACTGGTTGTCTCTTATATGTGCATCTATTCTGCGGTTCTACAATATCTCAAGAAGTAGCAAGATCGAGAGAATTCTTCTTCGTAAATACTATCATCTCATGGCTGTTTTGATGTTTCTTCCTGCACTTATCTTTCAGCCAAGGTTTCTCAATCTAGCCTTTGGTGCAGCTTTGGCAGTTTTCTTGGCATTAGAAATTATTCGAGTAAGTTAA ATGGGAACGCGTGACCATGGAGAGAGAAAATTCCTGGAATATCTGATATTCGGGCGTCCACCTCGCGCCAACGGGTTTTCTGGATTTACGATGGCTTTCTCGATGATCCCGTTGCTGAACGGAGAGAGAGCTGTGGTTCTTTTCTTCATCACCAGCGTCTTGGTTTCTCTCCCGTTCTCCCTCCTCTATCATGGTCTTGCTCTCTCTCTGCTTACCCTGTCCGCTCTTTGCATCGAAATCCAAGCAGAGAGTTCCAATTCTCTTCATCAATTTAAGACCAGGCCAGGTGCTTCATCAGGAATACTATTAGGAGCAATTACACTTCCTGCTGTAATGCTTGCTAAGATGATTCAGCTTACTAGAGCTTTCTCATCCAATCACACCGGACTTGAGGAGATTGAAACTTGGACTATGCACTTTTGGTCAACTTCAACCTGCTGTTTGAGTGTGCTTATGCTTCTCTGGAATGCTATGCATGAGTCTGATGTTGTTTCACAAACACGTTTCCATCGTCTTTGGAGGTTGAAGCTTGGTTTGGGTTGTAAGATCCTATATGGTGTTGTGTGCTATAGTTCCTTAGCAACAATGTATCCGAATGTTGTCCGCATGGCTCTTATGTCGTCGTGGATACTCTGTCATGGGTTGGTTGCTTCCAAATTGATTCAGCATCTTCTTAGTACCTTTCCATCTTGTGCTTCCATTGGGGAAGCGCTATTGGTTACGGCTGGACTTGTTCTCTACTTTGGTGACATGCTAGGATGTACTATTGCTAAGATGCTTGGGGCTCTTAGTTCGTCAGAATTGGTTTCTTTTCAGTATATGATGAACAGAAGTGAGATTAGTCCCATAATTCAGGGTCTGCTGCTTGGCCTTCTTCTGTGCCCAGTGGTCTTTAAACATCTCCACCGATGGGAATGCATTGTGAACACTGAAAACTCTGAAGCTAAGAAATACTTTGAGATCAGAAGATCTATGATATTTTTTGCCGTCCTCGGATTCATTTCGATCGTGGTCGTCCCATCATGGATGATGTTAGTTCATGAATTTGACACACATCCTTTCTTATGGGTCATATCCTTTACATTTTCAGAACCAGTTAAAAGACTATCTTTATGCGTCTACTGGTTGTCTCTTATATGTGCATCTATTCTGCGGTTCTACAATATCTCAAGAAGTAGCAAGATCGAGAGAATTCTTCTTCGTAAATACTATCATCTCATGGCTGTTTTGATGTTTCTTCCTGCACTTATCTTTCAGCCAAGGTTTCTCAATCTAGCCTTTGGTGCAGCTTTGGCAGTTTTCTTGGCATTAGAAATTATTCGAGTAAGTTAA MGTRDHGERKFLEYLIFGRPPRANGFSGFTMAFSMIPLLNGERAVVLFFITSVLVSLPFSLLYHGLALSLLTLSALCIEIQAESSNSLHQFKTRPGASSGILLGAITLPAVMLAKMIQLTRAFSSNHTGLEEIETWTMHFWSTSTCCLSVLMLLWNAMHESDVVSQTRFHRLWRLKLGLGCKILYGVVCYSSLATMYPNVVRMALMSSWILCHGLVASKLIQHLLSTFPSCASIGEALLVTAGLVLYFGDMLGCTIAKMLGALSSSELVSFQYMMNRSEISPIIQGLLLGLLLCPVVFKHLHRWECIVNTENSEAKKYFEIRRSMIFFAVLGFISIVVVPSWMMLVHEFDTHPFLWVISFTFSEPVKRLSLCVYWLSLICASILRFYNISRSSKIERILLRKYYHLMAVLMFLPALIFQPRFLNLAFGAALAVFLALEIIRVS Homology
BLAST of Carg26252 vs. NCBI nr
Match: KAG7019266.1 (Dolichol kinase EVAN, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 859.8 bits (2220), Expect = 1.1e-245 Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 0
BLAST of Carg26252 vs. NCBI nr
Match: KAG6583558.1 (ABC transporter G family member 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 803.5 bits (2074), Expect = 9.1e-229 Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 0
BLAST of Carg26252 vs. NCBI nr
Match: XP_022964908.1 (dolichol kinase EVAN [Cucurbita moschata]) HSP 1 Score: 790.0 bits (2039), Expect = 1.0e-224 Identity = 410/412 (99.51%), Postives = 411/412 (99.76%), Query Frame = 0
BLAST of Carg26252 vs. NCBI nr
Match: XP_023519430.1 (dolichol kinase EVAN isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 781.9 bits (2018), Expect = 2.8e-222 Identity = 408/412 (99.03%), Postives = 409/412 (99.27%), Query Frame = 0
BLAST of Carg26252 vs. NCBI nr
Match: XP_022970258.1 (dolichol kinase EVAN [Cucurbita maxima]) HSP 1 Score: 776.5 bits (2004), Expect = 1.2e-220 Identity = 403/412 (97.82%), Postives = 408/412 (99.03%), Query Frame = 0
BLAST of Carg26252 vs. ExPASy Swiss-Prot
Match: F4J4C8 (Dolichol kinase EVAN OS=Arabidopsis thaliana OX=3702 GN=EVN PE=2 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 2.3e-110 Identity = 217/406 (53.45%), Postives = 288/406 (70.94%), Query Frame = 0
BLAST of Carg26252 vs. ExPASy Swiss-Prot
Match: Q9UPQ8 (Dolichol kinase OS=Homo sapiens OX=9606 GN=DOLK PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 4.5e-05 Identity = 57/225 (25.33%), Postives = 93/225 (41.33%), Query Frame = 0
BLAST of Carg26252 vs. ExPASy Swiss-Prot
Match: Q8R2Y3 (Dolichol kinase OS=Mus musculus OX=10090 GN=Dolk PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 5.0e-04 Identity = 55/225 (24.44%), Postives = 94/225 (41.78%), Query Frame = 0
BLAST of Carg26252 vs. ExPASy TrEMBL
Match: A0A6J1HMA7 (Dolichol kinase OS=Cucurbita moschata OX=3662 GN=LOC111464874 PE=3 SV=1) HSP 1 Score: 790.0 bits (2039), Expect = 5.0e-225 Identity = 410/412 (99.51%), Postives = 411/412 (99.76%), Query Frame = 0
BLAST of Carg26252 vs. ExPASy TrEMBL
Match: A0A6J1I3D7 (Dolichol kinase OS=Cucurbita maxima OX=3661 GN=LOC111469273 PE=3 SV=1) HSP 1 Score: 776.5 bits (2004), Expect = 5.7e-221 Identity = 403/412 (97.82%), Postives = 408/412 (99.03%), Query Frame = 0
BLAST of Carg26252 vs. ExPASy TrEMBL
Match: A0A5D3DCU6 (Dolichol kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G00430 PE=3 SV=1) HSP 1 Score: 713.0 bits (1839), Expect = 7.8e-202 Identity = 370/413 (89.59%), Postives = 390/413 (94.43%), Query Frame = 0
BLAST of Carg26252 vs. ExPASy TrEMBL
Match: A0A1S3CIL8 (Dolichol kinase OS=Cucumis melo OX=3656 GN=LOC103501385 PE=3 SV=1) HSP 1 Score: 711.1 bits (1834), Expect = 3.0e-201 Identity = 369/412 (89.56%), Postives = 389/412 (94.42%), Query Frame = 0
BLAST of Carg26252 vs. ExPASy TrEMBL
Match: A0A1S3CIK9 (Dolichol kinase OS=Cucumis melo OX=3656 GN=LOC103501385 PE=3 SV=1) HSP 1 Score: 711.1 bits (1834), Expect = 3.0e-201 Identity = 369/412 (89.56%), Postives = 389/412 (94.42%), Query Frame = 0
BLAST of Carg26252 vs. TAIR 10
Match: AT3G45040.1 (phosphatidate cytidylyltransferase family protein ) HSP 1 Score: 400.6 bits (1028), Expect = 1.6e-111 Identity = 217/406 (53.45%), Postives = 288/406 (70.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|