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Carg26244 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGTTTTTGGTGCATGAAATATGTGAAAGATGTGACTTATCAAAGCCCTTAAGAGATCATCCCACACTGTTTGTTTGCTAATTTCCTGCACCAAATTTTGACCCTTTTTTCTCTCATGCAAAGTACTTTTCCAGATGGTTTAATGAACTAAGAATCTTTATGAATATGGCTTTCAAACAGTGTTGGTATCTTTTTAGGTTTCATATCATTTCATGTCGATTCTTCAAACTGTTCCATGAAAACACTACTTGTGTTTATATCGAGATTTTGTCCGTGGATTGAACGAGCTGATGTCAAATAACATCGTATTAGGTGAAACCGAGGAGTAACTTGAATCGAATGACCTTGAAGATTTTGTTGCGATGTGTTATGCAATTTCTCATATCTAAAATTCGGATTCGGTATCTGATGACCTCGATATTCTCCTACGACATAGTTATGTCACTTACTTCTCGCTTCTGAGAATACAAACTATTCCCAAGAGCAACGCGGATTCTTTTAACGTGTTTTGTCTTTACCTGCATGTTTTCTAGTAAAATTTTTAAGAGGCTTACTCAATATAAGATGGCTTTAGAAAGGAGCTTCTACGATTAAATTACCAAAATGGGAGGTGCATCTTGTTGGTATACGTAGTGACTATCAATTTATTTAAGTCTTTTCTACACATCCTATCTTCAGTATCGCTCTCATTTGAATGAGCCCCATGCTCAAGATTTGGAACTTGAATTCGGCACTTTGTATCACTGTATACTAATATAGGTATTTTAAGCATACTTTGTCCTCACTCACATACTTTCTACAAAAATTTACAAGAGATCACCCAACATAGTGTGGTTCTAAGAAAGTCAGGCTTAATTTTCGTGTTCTTATAATTGGGTCACCGAAAAAGGAGTACTTTGTTATTATATCTCTCATTCAAATGTCGTTTTGGATCATTCATATACCTTTTTTTACTCGGTGTCACATGTTAGGTTAAAGAACATTTGTGATAGAACATTAAAACAATAAAATATGTGATAACTTCTTAGCTAGGTTAACATGTCATAAGGATACTTTTCAATGACTTGCTTCCTTTTCATTTGGAACTACTATTTGACTTTTGGGTGAGTTGTGGTCCAAGATATCGATTCTACGACCCAAGAAAGTAGATGGCTAATCATTATTACCAAATTCACTCGAATTAAGACAATTTAGCCGACAATTTTTGTGAGATCTCACATTGGTTGGAAAGTGAACAAAGCATTTCTTACAAAGGTGTAGAAACCTCTCCCTTGCAGACACGTTTAAAAATCGTGAGGCTAATGGCGGTACATAACGGGCTAAAGCAGACAATATCTACTAACGATGGGCTTGAACTATTACAAATGGTATCAGATCCAAACACCAATCGATGTGCCAGTGAGGACGTTGGAACTCCAAAGAGGGTAGATTATAAGATCACACATTGGTTGAAGAGGAGAACAGAGCCTCCCTTATAAGGGTGTAGAAACCTCTTCCTATGAAGTTAACAGTGGTCTGTAACGGACTAAAGCGGACAACATCTGTTAGCAGTGAACACGGCGTGTTGGGAAACAATTTCTAGTTAAAAAAACAAAGTTTACAAGTTTGTGGAAAACAACATGGGAGGAGCAAAGGAGTTCCATGTCTTTGAGTTAACTCACTGTCCTTTCTATGTCCTCTCTGGTTGGGTCTTTCAGTTGATAAACAGAAAATTAAATGTCCTTCATATAAAAATACAAATCCATTATAAAGTTTTATGATCCAAATTTGCAATAATTTCATTTTCCAACTTCCCCTATCAACTAAAGTTCATCATCTTTTAATTTTTTCTCATGTGGGTCCTCTAATCTTCCTATTTATACCAAATCCATTCCTTCACTTTTCCATACAAAATAACAAAACTTTTCTCTCTTAAAAAATGCCTCATTCTTTTCTTATCCTTCTCTCTCTCTTTCTCTTCTTCTCTTTCATCTCTAGCCAGAATCCTCCCTCCCCTGGCTACTTCCCAAGCAACCAAGTTCAATCCATTGCCTTCGATCACGGCTTTCGAAACCGATGGGGCTCACAACATCAAAAAGTCGACCAAGGAACCTTAACTATCTGGCTCGATAGTTCATCAGGTATACTGTAATCTATCCACTTTAAGTTTTTGAGTTGAACAGTAAGTGTAACAGTCTAAGCCCACCACTAGCCGATATTGTCATATTTGAGTTTTCTCTTACGGGTTTCCCCTCAAGGTTTTTAAAACACGTCTGCTAGGAAGAGGTTTTCACACCCTTTTAAAGGGTGTTCTGTTCTCCTCCCTAACTGATGTGGGATCTCACAATCCACCCCTTCGGGGCCCAGCGTCCTTGCTAGCACTCCTTCCGTTCTCCAATTGATGTGGGATCCTCCAATCCACTCCCCTTTGGGACCCAACGTCCTTCTTGGCACATTGCCTCTTGTCCACTCGGGGCACAACCTTCTTACTAGCACATAGCCTAGTGTCTAGCTCTGATACTATTTATAATAGCTCAAGCCCACCACTAGTTGATATTGTTTCTATGGGCTTCCTTCCCGAATTTTCTTTTAAGATTTTTAAAACATTTTTTGTAGGGAGAGGTCTCCACACTCTTTTAAAGGATATTTCGTTAAGAAACGGGAGTAACTTAGTTGAGTTGTAGTTTAACTATAAATTATCTTTTTTTCCTTCTTAAACAGGCAGTGGATTCAAATCCCTCAATAGATACCAATCAGGCTACTTTGGAGCTGCCATTAAGCTTCATCCTGGCTACACTGCCGGAGTCATCACTTCTTTTTATGTAAGTATTCATTAAATTTACTCTTTAACATAGTGATGAATTTACTTATTTTTCTTTTGGGTTTGGTAGCTATCCAACAATGAAGATTACCCCGGAAACCACGACGAGATCGATATCGAATTCCTCGGAACGACGTCGGATAAGCCATATGTTCTACAAACCAATGTGTTTATGAGAGGGAGTGGAGATGGAAACATCATAGGAAGGGAAATGAGATTCCATCTCTGGTTCGATCCGACTCAAGATTTCCACAATTACGCCATTTTATGGACTCGAGAACAAATCATGTACGTTTCAAAATTACACATTTAGTCTTTGTACTTTCAAACGGACTATAACTTTTATTCATACGACGTTGTAGATTCTTGGTAGACGACGTACCGATCAGGCGGTACGAGAAGAAAACCGAAGCGACATATCCCGTGAGGCCAATGTGGGTGTACGGGTCGATATGGGATGCATCGTCGTGGGCGACAGAGGACGGAAAATACAAGGCTGATTACAAATATCAACCGTTTATCGGACGATACAACAACTTCAAGCTAGGTGGTTGTGCTGCAGACGGGGCTGCGTCGTGCCATCCGCTTAGCGGAGGACCGGGCAGCGGGATGAGCCAGCAGCAGGAGAGGGCCATGGAGTGGGTGCAAAGCAATTACTTGGTGTATAACTATTGCCATGATCCAAGAAGGGATCATACCTTAACACCTGAATGTTGA ATGGCTGTTTTTGGCAGTGGATTCAAATCCCTCAATAGATACCAATCAGGCTACTTTGGAGCTGCCATTAAGCTTCATCCTGGCTACACTGCCGGAGTCATCACTTCTTTTTATCTATCCAACAATGAAGATTACCCCGGAAACCACGACGAGATCGATATCGAATTCCTCGGAACGACGTCGGATAAGCCATATGTTCTACAAACCAATGTGTTTATGAGAGGGAGTGGAGATGGAAACATCATAGGAAGGGAAATGAGATTCCATCTCTGGTTCGATCCGACTCAAGATTTCCACAATTACGCCATTTTATGGACTCGAGAACAAATCATATTCTTGGTAGACGACGTACCGATCAGGCGGTACGAGAAGAAAACCGAAGCGACATATCCCGTGAGGCCAATGTGGGTGTACGGGTCGATATGGGATGCATCGTCGTGGGCGACAGAGGACGGAAAATACAAGGCTGATTACAAATATCAACCGTTTATCGGACGATACAACAACTTCAAGCTAGGTGGTTGTGCTGCAGACGGGGCTGCGTCGTGCCATCCGCTTAGCGGAGGACCGGGCAGCGGGATGAGCCAGCAGCAGGAGAGGGCCATGGAGTGGGTGCAAAGCAATTACTTGGTGTATAACTATTGCCATGATCCAAGAAGGGATCATACCTTAACACCTGAATGTTGA ATGGCTGTTTTTGGCAGTGGATTCAAATCCCTCAATAGATACCAATCAGGCTACTTTGGAGCTGCCATTAAGCTTCATCCTGGCTACACTGCCGGAGTCATCACTTCTTTTTATCTATCCAACAATGAAGATTACCCCGGAAACCACGACGAGATCGATATCGAATTCCTCGGAACGACGTCGGATAAGCCATATGTTCTACAAACCAATGTGTTTATGAGAGGGAGTGGAGATGGAAACATCATAGGAAGGGAAATGAGATTCCATCTCTGGTTCGATCCGACTCAAGATTTCCACAATTACGCCATTTTATGGACTCGAGAACAAATCATATTCTTGGTAGACGACGTACCGATCAGGCGGTACGAGAAGAAAACCGAAGCGACATATCCCGTGAGGCCAATGTGGGTGTACGGGTCGATATGGGATGCATCGTCGTGGGCGACAGAGGACGGAAAATACAAGGCTGATTACAAATATCAACCGTTTATCGGACGATACAACAACTTCAAGCTAGGTGGTTGTGCTGCAGACGGGGCTGCGTCGTGCCATCCGCTTAGCGGAGGACCGGGCAGCGGGATGAGCCAGCAGCAGGAGAGGGCCATGGAGTGGGTGCAAAGCAATTACTTGGTGTATAACTATTGCCATGATCCAAGAAGGGATCATACCTTAACACCTGAATGTTGA MAVFGSGFKSLNRYQSGYFGAAIKLHPGYTAGVITSFYLSNNEDYPGNHDEIDIEFLGTTSDKPYVLQTNVFMRGSGDGNIIGREMRFHLWFDPTQDFHNYAILWTREQIIFLVDDVPIRRYEKKTEATYPVRPMWVYGSIWDASSWATEDGKYKADYKYQPFIGRYNNFKLGGCAADGAASCHPLSGGPGSGMSQQQERAMEWVQSNYLVYNYCHDPRRDHTLTPEC Homology
BLAST of Carg26244 vs. NCBI nr
Match: KAG7019272.1 (putative xyloglucan endotransglucosylase/hydrolase protein 32, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 494.6 bits (1272), Expect = 4.6e-136 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of Carg26244 vs. NCBI nr
Match: XP_023519902.1 (probable xyloglucan endotransglucosylase/hydrolase protein 32 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 487.3 bits (1253), Expect = 7.4e-134 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of Carg26244 vs. NCBI nr
Match: KAG6583568.1 (putative xyloglucan endotransglucosylase/hydrolase protein 32, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 486.1 bits (1250), Expect = 1.6e-133 Identity = 223/224 (99.55%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of Carg26244 vs. NCBI nr
Match: XP_022970265.1 (probable xyloglucan endotransglucosylase/hydrolase protein 32 [Cucurbita maxima]) HSP 1 Score: 485.7 bits (1249), Expect = 2.2e-133 Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of Carg26244 vs. NCBI nr
Match: XP_022964905.1 (probable xyloglucan endotransglucosylase/hydrolase protein 32 [Cucurbita moschata]) HSP 1 Score: 483.0 bits (1242), Expect = 1.4e-132 Identity = 222/224 (99.11%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of Carg26244 vs. ExPASy Swiss-Prot
Match: P93046 (Xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana OX=3702 GN=XTH31 PE=1 SV=2) HSP 1 Score: 359.4 bits (921), Expect = 3.0e-98 Identity = 159/226 (70.35%), Postives = 186/226 (82.30%), Query Frame = 0
BLAST of Carg26244 vs. ExPASy Swiss-Prot
Match: Q9SJL9 (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana OX=3702 GN=XTH32 PE=2 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 1.5e-97 Identity = 160/226 (70.80%), Postives = 190/226 (84.07%), Query Frame = 0
BLAST of Carg26244 vs. ExPASy Swiss-Prot
Match: Q38908 (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana OX=3702 GN=XTH30 PE=2 SV=2) HSP 1 Score: 210.3 bits (534), Expect = 2.3e-53 Identity = 105/234 (44.87%), Postives = 140/234 (59.83%), Query Frame = 0
BLAST of Carg26244 vs. ExPASy Swiss-Prot
Match: Q8LDS2 (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana OX=3702 GN=XTH27 PE=2 SV=2) HSP 1 Score: 201.8 bits (512), Expect = 8.1e-51 Identity = 101/232 (43.53%), Postives = 136/232 (58.62%), Query Frame = 0
BLAST of Carg26244 vs. ExPASy Swiss-Prot
Match: Q8LC45 (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana OX=3702 GN=XTH33 PE=1 SV=2) HSP 1 Score: 201.1 bits (510), Expect = 1.4e-50 Identity = 94/241 (39.00%), Postives = 140/241 (58.09%), Query Frame = 0
BLAST of Carg26244 vs. ExPASy TrEMBL
Match: A0A6J1I2D8 (Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111469279 PE=3 SV=1) HSP 1 Score: 485.7 bits (1249), Expect = 1.0e-133 Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of Carg26244 vs. ExPASy TrEMBL
Match: A0A6J1HM52 (Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111464871 PE=3 SV=1) HSP 1 Score: 483.0 bits (1242), Expect = 6.7e-133 Identity = 222/224 (99.11%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of Carg26244 vs. ExPASy TrEMBL
Match: A0A0A0LV02 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=Csa_1G109370 PE=3 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 4.4e-124 Identity = 208/228 (91.23%), Postives = 217/228 (95.18%), Query Frame = 0
BLAST of Carg26244 vs. ExPASy TrEMBL
Match: N0DXB5 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=xth23 PE=3 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 5.7e-124 Identity = 208/228 (91.23%), Postives = 217/228 (95.18%), Query Frame = 0
BLAST of Carg26244 vs. ExPASy TrEMBL
Match: A0A5A7U8X2 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G001890 PE=3 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 2.7e-121 Identity = 203/228 (89.04%), Postives = 215/228 (94.30%), Query Frame = 0
BLAST of Carg26244 vs. TAIR 10
Match: AT3G44990.1 (xyloglucan endo-transglycosylase-related 8 ) HSP 1 Score: 359.4 bits (921), Expect = 2.2e-99 Identity = 159/226 (70.35%), Postives = 186/226 (82.30%), Query Frame = 0
BLAST of Carg26244 vs. TAIR 10
Match: AT2G36870.1 (xyloglucan endotransglucosylase/hydrolase 32 ) HSP 1 Score: 357.1 bits (915), Expect = 1.1e-98 Identity = 160/226 (70.80%), Postives = 190/226 (84.07%), Query Frame = 0
BLAST of Carg26244 vs. TAIR 10
Match: AT1G32170.1 (xyloglucan endotransglucosylase/hydrolase 30 ) HSP 1 Score: 210.3 bits (534), Expect = 1.6e-54 Identity = 105/234 (44.87%), Postives = 140/234 (59.83%), Query Frame = 0
BLAST of Carg26244 vs. TAIR 10
Match: AT2G01850.1 (endoxyloglucan transferase A3 ) HSP 1 Score: 201.8 bits (512), Expect = 5.8e-52 Identity = 101/232 (43.53%), Postives = 136/232 (58.62%), Query Frame = 0
BLAST of Carg26244 vs. TAIR 10
Match: AT1G10550.1 (xyloglucan:xyloglucosyl transferase 33 ) HSP 1 Score: 201.1 bits (510), Expect = 9.9e-52 Identity = 94/241 (39.00%), Postives = 140/241 (58.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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