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Carg26240 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATGATAAATTCTGCCCCTTCTACAAATCGGTCTGGATGATGCGCAATATCATCCATTTCTATAATTTGGCTAATCAGGTAGAGCTACTACTGTTTTTGACCAAATCATATCACCATTGTTGAAATGTGAGGTGGTAGTGTGATGGTCATAATTTTGGTTGGATATTGTTTGTTGTAGGCAGTAGAGAGGGGAGCAGGTATGGATGGCCAAAAGATAACATACACTTTGATTAAGCATCGGTTGGGAGATCTGTTCTATCGCCTGGTGTAAGTAAAAAACAAGTGGCATTGCCATTACCATTGCAATATTTTGATTGATTGTGATAGTAGATAAATTAAAAACACTTGGGGTTTTGCAGGTCTCAGAAGTTCGAGGATCCAGCTGAAGGAGAAGCAGCTCTTATTGAGAAATTTAAGAAGCTACATGAAGATCTTACAAATGGTTTCCGTGCTCTCGAGGATGAAACTCGGTAGATTTTCTTTTTTTGCTTTAAAAAAAAAAGATTGCCGACTTCATTATTATTTTCCTTTTGTGTAGCCTATTATTATTATTACTACGATGTATTATGCTCTGCAGTCGTCCGCCTTTCAGTTAGCCATTATTTAATAATCATATGTATTTTCTTTTTCCGTGTTCGACTTTGACGTTCAGATGTGAGATTCTTTGTATTCCCTTATTCATATTTTTACCAAAATCTGTGACATAATAAGATGAATCCGCGTTTGAATTTGGCGGTTGCTTTTGCC TATGATAAATTCTGCCCCTTCTACAAATCGGTCTGGATGATGCGCAATATCATCCATTTCTATAATTTGGCTAATCAGGCAGTAGAGAGGGGAGCAGGTATGGATGGCCAAAAGATAACATACACTTTGATTAAGCATCGGTTGGGAGATCTGTTCTATCGCCTGGTGTCTCAGAAGTTCGAGGATCCAGCTGAAGGAGAAGCAGCTCTTATTGAGAAATTTAAGAAGCTACATGAAGATCTTACAAATGGTTTCCGTGCTCTCGAGGATGAAACTCGGTAGATTTTCTTTTTTTGCTTTAAAAAAAAAAGATTGCCGACTTCATTATTATTTTCCTTTTGTGTAGCCTATTATTATTATTACTACGATGTATTATGCTCTGCAGTCGTCCGCCTTTCAGTTAGCCATTATTTAATAATCATATGTATTTTCTTTTTCCGTGTTCGACTTTGACGTTCAGATGTGAGATTCTTTGTATTCCCTTATTCATATTTTTACCAAAATCTGTGACATAATAAGATGAATCCGCGTTTGAATTTGGCGGTTGCTTTTGCC TATGATAAATTCTGCCCCTTCTACAAATCGGTCTGGATGATGCGCAATATCATCCATTTCTATAATTTGGCTAATCAGGCAGTAGAGAGGGGAGCAGGTATGGATGGCCAAAAGATAACATACACTTTGATTAAGCATCGGTTGGGAGATCTGTTCTATCGCCTGGTGTCTCAGAAGTTCGAGGATCCAGCTGAAGGAGAAGCAGCTCTTATTGAGAAATTTAAGAAGCTACATGAAGATCTTACAAATGGTTTCCGTGCTCTCGAGGATGAAACTCGGTAG YDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEAALIEKFKKLHEDLTNGFRALEDETR Homology
BLAST of Carg26240 vs. NCBI nr
Match: XP_023514653.1 (V-type proton ATPase catalytic subunit A [Cucurbita pepo subsp. pepo]) HSP 1 Score: 196.8 bits (499), Expect = 8.1e-47 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Carg26240 vs. NCBI nr
Match: KAG7019276.1 (hypothetical protein SDJN02_18236, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 196.8 bits (499), Expect = 8.1e-47 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Carg26240 vs. NCBI nr
Match: XP_022964408.1 (V-type proton ATPase catalytic subunit A [Cucurbita moschata] >KAG6593602.1 hypothetical protein SDJN03_13078, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025948.1 hypothetical protein SDJN02_12446 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 196.8 bits (499), Expect = 8.1e-47 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Carg26240 vs. NCBI nr
Match: XP_023000193.1 (V-type proton ATPase catalytic subunit A [Cucurbita maxima]) HSP 1 Score: 196.8 bits (499), Expect = 8.1e-47 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Carg26240 vs. NCBI nr
Match: XP_038899437.1 (V-type proton ATPase catalytic subunit A [Benincasa hispida]) HSP 1 Score: 195.3 bits (495), Expect = 2.4e-46 Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Carg26240 vs. ExPASy Swiss-Prot
Match: Q9SM09 (V-type proton ATPase catalytic subunit A OS=Citrus unshiu OX=55188 PE=2 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 5.0e-47 Identity = 88/93 (94.62%), Postives = 90/93 (96.77%), Query Frame = 0
BLAST of Carg26240 vs. ExPASy Swiss-Prot
Match: P09469 (V-type proton ATPase catalytic subunit A OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 1.6e-45 Identity = 85/93 (91.40%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of Carg26240 vs. ExPASy Swiss-Prot
Match: O23654 (V-type proton ATPase catalytic subunit A OS=Arabidopsis thaliana OX=3702 GN=VHA-A PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.6e-45 Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0
BLAST of Carg26240 vs. ExPASy Swiss-Prot
Match: Q39291 (V-type proton ATPase catalytic subunit A OS=Brassica napus OX=3708 PE=2 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 4.6e-45 Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of Carg26240 vs. ExPASy Swiss-Prot
Match: P13548 (V-type proton ATPase catalytic subunit A OS=Vigna radiata var. radiata OX=3916 PE=1 SV=3) HSP 1 Score: 179.5 bits (454), Expect = 1.8e-44 Identity = 83/93 (89.25%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of Carg26240 vs. ExPASy TrEMBL
Match: A0A6J1KLY2 (V-ATPase 69 kDa subunit OS=Cucurbita maxima OX=3661 GN=LOC111494484 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 3.9e-47 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Carg26240 vs. ExPASy TrEMBL
Match: A0A6J1HKR0 (V-ATPase 69 kDa subunit OS=Cucurbita moschata OX=3662 GN=LOC111464441 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 3.9e-47 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Carg26240 vs. ExPASy TrEMBL
Match: A0A5A7UYQ9 (V-ATPase 69 kDa subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001870 PE=3 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 4.4e-46 Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of Carg26240 vs. ExPASy TrEMBL
Match: A0A2P5DYZ4 (V-ATPase 69 kDa subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_017770 PE=3 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 4.4e-46 Identity = 90/93 (96.77%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Carg26240 vs. ExPASy TrEMBL
Match: A0A6J1JP40 (V-ATPase 69 kDa subunit OS=Cucurbita maxima OX=3661 GN=LOC111488597 PE=3 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 4.4e-46 Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of Carg26240 vs. TAIR 10
Match: AT1G78900.1 (vacuolar ATP synthase subunit A ) HSP 1 Score: 181.8 bits (460), Expect = 2.5e-46 Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0
BLAST of Carg26240 vs. TAIR 10
Match: AT1G78900.2 (vacuolar ATP synthase subunit A ) HSP 1 Score: 181.8 bits (460), Expect = 2.5e-46 Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0
BLAST of Carg26240 vs. TAIR 10
Match: AT1G16820.1 (vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related ) HSP 1 Score: 71.2 bits (173), Expect = 4.8e-13 Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 0
BLAST of Carg26240 vs. TAIR 10
Match: AT1G16820.2 (vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related ) HSP 1 Score: 71.2 bits (173), Expect = 4.8e-13 Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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