![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Carg26239 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATTAATGTTGTGCAGGAATTACTTTGGCTGAATACTTCAGAAGATATGGGATACAATGTAAGCATGATGGCAGATTCAACATCCGATGGGCAGAAGCACTGCGTGAAATATCAGGACGACTGGTAAATAGCTGGAGCTTGTTTTCTAATTTTATAATCATTAACTTTACATATATTAGGACTTGTTTAGAAAGTTGTGTTTCTTGTGTGATTTGGTTAGATTGATTTTGTGGTGCACTATTCTGATCTTTCTTTTCTCACCAAGCACCATCATCTCATAAGTTGTAACTAAAACTTTCTCACTTCCAGCCTTATTAATCTCAATAATATTTAACCGAAGAAACATGGGTTGAAAGTGTGGTATAATTGTATAAAACCCGATTGTCATTCTTTAACAACCTAGCATTGACATGTTAGGTAAACATCTATTGATAAACATACATACACTCATTTCTATAGTCTATTGTGCTATAATATTTGCATGTTAAATAAAATTGTTACATTGAAATTCCCAAAGTAAAAGACGAGATAAGAAATATGACATCTCAAAACCAATGAAGCAAACTGTATATCCAATAAGATTCATTGTCTATTATCGAAGGCGTATAAAGGGAATACCAAACTAAATAAACGTTCAATTATATATTTAATTATATTTTTCTCATTTCCTTGTTTTTATTTTTTTAAATTTTTAAAATTTTTTTATGTTCATCTAGACTATGTCTTGTTCACTTGCCTCTGAAATTAAAGAGCATCTTATTCTAGTTAAGCATCTGATTAGTTTCAAGATGTTGTATTTACGTCACATGACACATAACTCAATATGATTGTCAGTGTTGCATATAAGCATTCTAAGACAGTGTCCACTGCTTAGATTTCTTGGCTTGAAGTTGAACTCTTAAGATGAGTGCACGTAACTATTGTATTTCTGTTCTTGTCTTATTGTTGTTGTTGGACTTGTCTTCTTTGTTCCTTTTTCAGGCTGAAATGCCTGCAGATAGTGGATATCCTGCATACCTAGCAGCACGTTTAGCCTCTTTCTATGAGCGTGCTGGTAAAGTGAAATGCCTTGGTGGGCCAGAACGAACTGGTAGTGTTACCATCGTCGGTGCAGTTTCTCCACCAGGAGGAGATTCTCTGATCCCG ATGCATTAATGTTGTGCAGGAATTACTTTGGCTGAATACTTCAGAAGATATGGGATACAATGTAAGCATGATGGCAGATTCAACATCCGATGGGCAGAAGCACTGCGTGAAATATCAGGACGACTGGCTGAAATGCCTGCAGATAGTGGATATCCTGCATACCTAGCAGCACGTTTAGCCTCTTTCTATGAGCGTGCTGGTAAAGTGAAATGCCTTGGTGGGCCAGAACGAACTGGTAGTGTTACCATCGTCGGTGCAGTTTCTCCACCAGGAGGAGATTCTCTGATCCCG ATGCCTGCAGATAGTGGATATCCTGCATACCTAGCAGCACGTTTAGCCTCTTTCTATGAGCGTGCTGGTAAAGTGAAATGCCTTGGTGGGCCAGAACGAACTGGTAGTGTTACCATCGTCGGTGCAGTTTCTCCACCAGGAGGAGATTCTCTGATCCCG MPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDSLIP Homology
BLAST of Carg26239 vs. NCBI nr
Match: KAG7019277.1 (V-type proton ATPase catalytic subunit A, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 110.2 bits (274), Expect = 5.7e-21 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of Carg26239 vs. NCBI nr
Match: KZV43452.1 (V-type proton ATPase catalytic subunit A-like [Dorcoceras hygrometricum]) HSP 1 Score: 102.4 bits (254), Expect = 1.2e-18 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of Carg26239 vs. NCBI nr
Match: MBA0774635.1 (hypothetical protein [Gossypium trilobum]) HSP 1 Score: 102.4 bits (254), Expect = 1.2e-18 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of Carg26239 vs. NCBI nr
Match: XP_034684445.1 (V-type proton ATPase catalytic subunit A-like [Vitis riparia]) HSP 1 Score: 102.4 bits (254), Expect = 1.2e-18 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of Carg26239 vs. NCBI nr
Match: XP_022147742.1 (V-type proton ATPase catalytic subunit A [Momordica charantia]) HSP 1 Score: 102.4 bits (254), Expect = 1.2e-18 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of Carg26239 vs. ExPASy Swiss-Prot
Match: Q9SM09 (V-type proton ATPase catalytic subunit A OS=Citrus unshiu OX=55188 PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.6e-21 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of Carg26239 vs. ExPASy Swiss-Prot
Match: P31405 (V-type proton ATPase catalytic subunit A OS=Gossypium hirsutum OX=3635 GN=CVA69.24 PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.6e-21 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of Carg26239 vs. ExPASy Swiss-Prot
Match: O23654 (V-type proton ATPase catalytic subunit A OS=Arabidopsis thaliana OX=3702 GN=VHA-A PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 5.9e-21 Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of Carg26239 vs. ExPASy Swiss-Prot
Match: Q39291 (V-type proton ATPase catalytic subunit A OS=Brassica napus OX=3708 PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 5.9e-21 Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of Carg26239 vs. ExPASy Swiss-Prot
Match: P09469 (V-type proton ATPase catalytic subunit A OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 5.9e-21 Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of Carg26239 vs. ExPASy TrEMBL
Match: Q42477 (V-ATPase 69 kDa subunit OS=Gossypium hirsutum OX=3635 GN=LOC107958489 PE=2 SV=2) HSP 1 Score: 102.4 bits (254), Expect = 5.8e-19 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of Carg26239 vs. ExPASy TrEMBL
Match: M5WQS2 (V-ATPase 69 kDa subunit OS=Prunus persica OX=3760 GN=PRUPE_3G022700 PE=3 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 5.8e-19 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of Carg26239 vs. ExPASy TrEMBL
Match: A0A6I9SR07 (V-ATPase 69 kDa subunit OS=Sesamum indicum OX=4182 GN=LOC105157931 PE=3 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 5.8e-19 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of Carg26239 vs. ExPASy TrEMBL
Match: A0A2H5QI51 (V-ATPase 69 kDa subunit OS=Citrus unshiu OX=55188 GN=CUMW_232450 PE=3 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 5.8e-19 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of Carg26239 vs. ExPASy TrEMBL
Match: A0A2P5VZT6 (V-ATPase 69 kDa subunit OS=Gossypium barbadense OX=3634 GN=ES319_A05G119900v1 PE=3 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 5.8e-19 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of Carg26239 vs. TAIR 10
Match: AT1G78900.1 (vacuolar ATP synthase subunit A ) HSP 1 Score: 100.5 bits (249), Expect = 4.2e-22 Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of Carg26239 vs. TAIR 10
Match: AT1G78900.2 (vacuolar ATP synthase subunit A ) HSP 1 Score: 100.5 bits (249), Expect = 4.2e-22 Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|