Carg26030 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg26030
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ran-binding protein 1
Location	Carg_Chr13: 254874 .. 257800 (-)
RNA-Seq Expression	Carg26030
Synteny	Carg26030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGTAGATTTATTTGTTCCAACTCCAAGTGAAGTTCATCGTCCCATATATAAACCCTACTTTCTCCGCCCGCTTTCTCCCCATTCCGATCTGTATCTTCCAATCTAGCCGTCCACTTTCTCAACCAACCCTAAACCCTCATCCATGGCGAGCGCCGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGCAGAGGATGAAGACACTGGAGCACAAGTCGCCCCAATCGTTAAGTTGGAGGAGGTCGCCGTTACCACCGGTGAAGAAAACGAAGACGCTATTCTCGATCTGTAAGCTTACCTCATTACTTGTTTTTTTTTTTTGTTTGTTTTTTCTATCGGATTTGCTCAGCCTAGGTTTTAAGTCGGATTTGTTTCATATTCGTATTCGTTGTTTTAGGAAATCCAAACTGTACCGATTTGATAAAGATGGAAACCAGTGGAAGGAGAGGGGTGCTGGTACGGTTAAGTTTTTGAAGCATAAGGAAACTGGAAAGGTTCGCCTTGTTATGAGACAGTCTAAAACCCTCAAGATCTGCGCTAACCATCTTGGTTCGTTCTCAATTCGCTGCTTGTTCCTTCGCTTATATATCAAGCTCCTTTTAGTTTAGGGTTTTTGTTACTTTCTTGGTTTTGGTGGTGTTCTTCATTTTTATTGATTGATTTGTTGTGATTGTAGTTCTTCCATCAATGTCGGTTCAAGAGCACGTTGGAAATGACAAGTCGTGCGTGTGGCATGCCACTGACTTTGCTGATGGTGAATTGAAAGATGAGCTTTTTTGTATCAGATTCCCATCTATTGAGAGTGAGTACAACTCCGATTTTTTTTTTTTTTTTTGTTTCTCTCTGAATCTTTGATGTTGATTTACTGATAGACTCTTCTAGACTTTGGATATATTGATGTCTGGCAGTGGGCAATGTTCGTATTAAAGATCGCTCTTATATTGTTTCACGTTTTGTGTTTTCTTTTCCACTCCAAAACAAATTATATGTTTGAGCTCTCTAGTTGTCTCTGGTTTGAAGTACCACTAGGATAATTCTTTTCATTGACAGTACTTGGTTCTACTGATGGTATAGTATAGTTTTAATCAGTTCATGATGGTAACTTTATCCATGAAAATTCACTGCTCCGCTTATTTTTACTGATTGTTGCTCCAAATATGAATATATTTCTTTTCATTTTCGTTAACATTTGTTTTTCCTATTAAAAAATGGGGAAGTTCTCTGTTCAGACATTGATCTCTGTTAGTATACACAGTTTCTTCAAGTATCTAATTCTGCAAGTGTTAACTTTGTAAGTCAGTTGTGGTGGTAATGGCAGAGTTGGAGATCGGTGCCTGAAAAGGATTGTAGTATAGGATTGTTATTTTATATGGTGATGGTTGCTAATAAAATTTGGTAGGATAAAGTAGGTAAAAAGGTGAGTGCTTTCGTTGATGTATACTTAGCTGTAATTTTATTTCAGAGGATCTCAGTAATGAAAACCAGTAGAAAAAATGGTGGAAGATGTTAATTGTATGGAAGGAAATTTCATAGTTAACAATTATCGGTTGCTGCTGTTGCCCTTTGAGTTGTGTAACTGATATATTGTACGTTCAATGTTTCATTTCTAGTGTATTTGAAATGCGGAAAGATGGCTGTTCCCTTTTGTATTTCACAGCAGTTTTAGCTCATTTTATAACTTTTCTATTTCTTTTAACTACTCAACTGTCTTTTACCTCCCCTGTTTTAGGGTCATTTAGTCCAAAATATTTTCAAATTTCTAGTTTTGGCTTGTTTTTATCGTCTCTAGACATTCTTAGCGTCATCTATTTCTCCCTTAGTGTCTTGCTTGTATTTGGGGTCTGTATCAGAGGTAGGTTTGAATAAACTCAATGGTAGAAATTCCAGGACTTACCAATGCATACTTGTTTCCCATGGAATAGCTATAGAGCTTATAGAGTCAGCTTGGCTTGAAATGTTGCAGCCTTTCCCCCCATTAGATATGAAATATTTTCTTTGTACTACATACACTGCAAAACCTTCATGGAAACACCAAAGAAGTCCTCTGTACTACATAACTTATTAACTGTGCTTGTCCACTTTTTTCCGTCTTGGTTACACTTTTCTTTTTGGTATTATTAGACTGCAAGACCTTCATGGAAACATTCCAAGAAGTTGCTGAGTCCCAAAAGAAGAAAGAGGAAAATAAAGATGCATCTGCAGCAGCTGGTCTACTTGAAAAATTGAGCGTTGAAGACGAAAAGAAAGCCGAGAAAGCTGAAGATAAAGCTGAAGACCCACCTGTAAAATCTGAGGAAAAGGATAAACCTGAGGGCGAGGCAGAGAAATCAGATGCAGAAAAGAAAGAGTAGAGAGCCTGTTTCGCCTGCCAAGGCATATACGGTAGCTCCCTCCTCTATCGGATATATCTACAATGAGGTGTTTGACCTCCCATTCATCCATGTCTCTTGGTACATTAAAGCAGTCAATTCTTGGATTGGTTGGTTGACTTTTCTGGGCTGGGAAAATGAGAGTCGTCTAAATAGTAGTTTGTTTGGTCAGTTGGTCGGTTGGGGGAGTCGGTTTTCTATTGTTCTCCCTCCTTTCATTTGAAAATGAGATTGATTTGGAGTCAGTGTTGTGTGGTGGTGGGCGTGTTTGTGAATCCTCCAAGGTTAAATAGCATTTTTAGAATACGAACAAGTTTGTGTGCAGGGCAGAGATATTTATAGTTGTTTTTGGTTGAGGAAAACATGATTGATTGGTTGTGTTGTGGTCTTATCATATTATTCAAGTTCTAGCTTTACTCTGGGCTGCTTTCTATTTATATTGGTTTGTAGATGATTGTGTTCTTTGAGATTGATGGAAACAGGTTAATAGTTTATTTATAGATCTCAATCAATGAGATGGAAATGAAAGATGGAAAGAGGTTTTTTATTGAGT

mRNA sequence

TGTGTAGATTTATTTGTTCCAACTCCAAGTGAAGTTCATCGTCCCATATATAAACCCTACTTTCTCCGCCCGCTTTCTCCCCATTCCGATCTGTATCTTCCAATCTAGCCGTCCACTTTCTCAACCAACCCTAAACCCTCATCCATGGCGAGCGCCGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGCAGAGGATGAAGACACTGGAGCACAAGTCGCCCCAATCGTTAAGTTGGAGGAGGTCGCCGTTACCACCGGTGAAGAAAACGAAGACGCTATTCTCGATCTGAAATCCAAACTGTACCGATTTGATAAAGATGGAAACCAGTGGAAGGAGAGGGGTGCTGGTACGGTTAAGTTTTTGAAGCATAAGGAAACTGGAAAGGTTCGCCTTGTTATGAGACAGTCTAAAACCCTCAAGATCTGCGCTAACCATCTTGTTCTTCCATCAATGTCGGTTCAAGAGCACGTTGGAAATGACAAGTCGTGCGTGTGGCATGCCACTGACTTTGCTGATGGTGAATTGAAAGATGAGCTTTTTTGTATCAGATTCCCATCTATTGAGAACTGCAAGACCTTCATGGAAACATTCCAAGAAGTTGCTGAGTCCCAAAAGAAGAAAGAGGAAAATAAAGATGCATCTGCAGCAGCTGGTCTACTTGAAAAATTGAGCGTTGAAGACGAAAAGAAAGCCGAGAAAGCTGAAGATAAAGCTGAAGACCCACCTGTAAAATCTGAGGAAAAGGATAAACCTGAGGGCGAGGCAGAGAAATCAGATGCAGAAAAGAAAGAGTAGAGAGCCTGTTTCGCCTGCCAAGGCATATACGGTAGCTCCCTCCTCTATCGGATATATCTACAATGAGGTGTTTGACCTCCCATTCATCCATGTCTCTTGGTACATTAAAGCAGTCAATTCTTGGATTGGTTGGTTGACTTTTCTGGGCTGGGAAAATGAGAGTCGTCTAAATAGTAGTTTGTTTGGTCAGTTGGTCGGTTGGGGGAGTCGGTTTTCTATTGTTCTCCCTCCTTTCATTTGAAAATGAGATTGATTTGGAGTCAGTGTTGTGTGGTGGTGGGCGTGTTTGTGAATCCTCCAAGGTTAAATAGCATTTTTAGAATACGAACAAGTTTGTGTGCAGGGCAGAGATATTTATAGTTGTTTTTGGTTGAGGAAAACATGATTGATTGGTTGTGTTGTGGTCTTATCATATTATTCAAGTTCTAGCTTTACTCTGGGCTGCTTTCTATTTATATTGGTTTGTAGATGATTGTGTTCTTTGAGATTGATGGAAACAGGTTAATAGTTTATTTATAGATCTCAATCAATGAGATGGAAATGAAAGATGGAAAGAGGTTTTTTATTGAGT

Coding sequence (CDS)

ATGGCGAGCGCCGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGCAGAGGATGAAGACACTGGAGCACAAGTCGCCCCAATCGTTAAGTTGGAGGAGGTCGCCGTTACCACCGGTGAAGAAAACGAAGACGCTATTCTCGATCTGAAATCCAAACTGTACCGATTTGATAAAGATGGAAACCAGTGGAAGGAGAGGGGTGCTGGTACGGTTAAGTTTTTGAAGCATAAGGAAACTGGAAAGGTTCGCCTTGTTATGAGACAGTCTAAAACCCTCAAGATCTGCGCTAACCATCTTGTTCTTCCATCAATGTCGGTTCAAGAGCACGTTGGAAATGACAAGTCGTGCGTGTGGCATGCCACTGACTTTGCTGATGGTGAATTGAAAGATGAGCTTTTTTGTATCAGATTCCCATCTATTGAGAACTGCAAGACCTTCATGGAAACATTCCAAGAAGTTGCTGAGTCCCAAAAGAAGAAAGAGGAAAATAAAGATGCATCTGCAGCAGCTGGTCTACTTGAAAAATTGAGCGTTGAAGACGAAAAGAAAGCCGAGAAAGCTGAAGATAAAGCTGAAGACCCACCTGTAAAATCTGAGGAAAAGGATAAACCTGAGGGCGAGGCAGAGAAATCAGATGCAGAAAAGAAAGAGTAG

Protein sequence

MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKDGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWHATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVEDEKKAEKAEDKAEDPPVKSEEKDKPEGEAEKSDAEKKE

Homology

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BLAST of Carg26030 vs. NCBI nr
Match: KAG6583353.1 (Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019122.1 Ran-binding protein 1-like c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 407.1 bits (1045), Expect = 9.3e-110
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60
           MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEKAEDKAEDPPVKSEEKDKPEGEAEKSDAEKKE 219
           DEKKAEKAEDKAEDPPVKSEEKDKPEGEAEKSDAEKKE
Sbjct: 181 DEKKAEKAEDKAEDPPVKSEEKDKPEGEAEKSDAEKKE 218

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BLAST of Carg26030 vs. NCBI nr
Match: XP_022970593.1 (ran-binding protein 1 homolog a-like [Cucurbita maxima])

HSP 1 Score: 398.3 bits (1022), Expect = 4.3e-107
Identity = 215/218 (98.62%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60
           MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEKAEDKAEDPPVKSEEKDKPEGEAEKSDAEKKE 219
           DEKKAEKAEDKAE  PVKSEEKDKPEGEA KSDAEKKE
Sbjct: 181 DEKKAEKAEDKAEFTPVKSEEKDKPEGEAAKSDAEKKE 218

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BLAST of Carg26030 vs. NCBI nr
Match: XP_023519267.1 (ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 397.5 bits (1020), Expect = 7.4e-107
Identity = 213/218 (97.71%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60
           MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEKAEDKAEDPPVKSEEKDKPEGEAEKSDAEKKE 219
           DEK  +K+EDKAED PVKSEEKDKPEGEAEKSDAEKKE
Sbjct: 181 DEKAEDKSEDKAEDTPVKSEEKDKPEGEAEKSDAEKKE 218

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BLAST of Carg26030 vs. NCBI nr
Match: XP_022964941.1 (ran-binding protein 1 homolog a-like [Cucurbita moschata])

HSP 1 Score: 394.4 bits (1012), Expect = 6.2e-106
Identity = 215/222 (96.85%), Postives = 216/222 (97.30%), Query Frame = 0


Query: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60
           MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120
           GNQWKERGAGTVKFLKH+ETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHRETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEKA----EDKAEDPPVKSEEKDKPEGEAEKSDAEKKE 219
           DEKKAEKA    EDKAED PVKSEEK KPEGEAEKSDAEKKE
Sbjct: 181 DEKKAEKAEDKSEDKAEDTPVKSEEKGKPEGEAEKSDAEKKE 222

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BLAST of Carg26030 vs. NCBI nr
Match: XP_008457357.1 (PREDICTED: ran-binding protein 1 homolog a [Cucumis melo] >XP_011658664.2 ran-binding protein 1 homolog a [Cucumis sativus] >KAA0060033.1 ran-binding protein 1-like protein a-like [Cucumis melo var. makuwa] >KGN65824.1 hypothetical protein Csa_023197 [Cucumis sativus] >TYJ97290.1 ran-binding protein 1-like protein a-like [Cucumis melo var. makuwa])

HSP 1 Score: 375.9 bits (964), Expect = 2.3e-100
Identity = 203/219 (92.69%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPAAEDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAE-KAEDKAEDPPVKSEEKDKPEGEAEKSDAEKKE 219
           DEKKAE K+EDKAED PVKS+E+DKPEGEA KSDAEKK+
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219

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BLAST of Carg26030 vs. ExPASy Swiss-Prot
Match: Q9LMK7 (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 5.2e-79
Identity = 162/212 (76.42%), Postives = 181/212 (85.38%), Query Frame = 0


Query: 7   ERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKDGNQWKE 66
           E R+EEEA A EDEDTGAQVAPIV+LEEVAVTTGEE+EDA+LDLKSKLYRFDKD NQWKE
Sbjct: 9   EHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKE 68

Query: 67  RGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWHATDFAD 126
           RGAGTVKFLKHK TGK+RLVMRQSKTLKICANH V   MSVQEHVGN+KSCVWHA DFAD
Sbjct: 69  RGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFAD 128

Query: 127 GELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVEDEKKAE 186
           GELKDELFCIRF SIENCKTFM+ F+EVAES+++KEE+KDA+  AGLLEKL+VE+ K  E
Sbjct: 129 GELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTVEETKTEE 188

Query: 187 KAEDKA-EDPPVKSEEKDKPEGEAEKSDAEKK 218
           K E KA E    + + ++K E EAEKS   KK
Sbjct: 189 KTEAKAVETAKTEVKAEEKKESEAEKSGEAKK 220

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BLAST of Carg26030 vs. ExPASy Swiss-Prot
Match: Q8RWG8 (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 SV=2)

HSP 1 Score: 281.6 bits (719), Expect = 7.7e-75
Identity = 155/211 (73.46%), Postives = 175/211 (82.94%), Query Frame = 0


Query: 5   DTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKDGNQW 64
           + E R+EEE  A EDEDTGAQVAPIV+LEEVAVTTGEE+ED ILDLKSKLYRFDKDG+QW
Sbjct: 9   ERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQW 68

Query: 65  KERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWHATDF 124
           KERGAGTVKFLKH+ +GK+RLVMRQSKTLKICANHLV   MSVQEH GNDKSCVWHA DF
Sbjct: 69  KERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDF 128

Query: 125 ADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVEDEKK 184
           +DGELKDELFCIRF S+ENCK FM+ F+EVAES+++KEE+KDAS  AGLLEKL+VE EK+
Sbjct: 129 SDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVE-EKE 188

Query: 185 AEKAEDKAEDPPVKSEEKDKPEGEAEKSDAE 216
           +EK       P  K+EE  K E   EK   E
Sbjct: 189 SEK------KPVEKAEENKKSEAVEEKKTEE 212

[Close]

BLAST of Carg26030 vs. ExPASy Swiss-Prot
Match: P92985 (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.2e-73
Identity = 150/216 (69.44%), Postives = 173/216 (80.09%), Query Frame = 0


Query: 1   MASADTER-REEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDK 60
           MAS + ER   E+E    EDEDTGAQVAPIV+LEEVAVTTGEE+EDA+LDLKSK+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVW 120
           +GNQWKERGAGTVK LKHKETGKVRLVMRQSKTLKICANHL+   MSVQEH GN+KSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSV 180
           HATDF+DGELKDELFCIRF SIENCKTFME F E+AESQ+  +E+     AAGL+E LSV
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 EDEKKAEKAEDKAEDPPVKSEEKDKPEGEAEKSDAE 216
           E+    EKA++  E  P K +++ K E   E+   E
Sbjct: 181 EENISEEKAKEAEEKEPAKEDKETKKEKVEEEKKTE 216

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BLAST of Carg26030 vs. ExPASy Swiss-Prot
Match: Q09717 (Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sbp1 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31
Identity = 74/160 (46.25%), Postives = 97/160 (60.62%), Query Frame = 0


Query: 2   ASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKDG 61
           AS + E++  E    AE         PIVKL  V   T EE E     +++KL+RFDK  
Sbjct: 51  ASTNDEKKPAEGDEDAEPASPEVHFEPIVKLSAVETKTNEEEETVEFKMRAKLFRFDKAA 110

Query: 62  NQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH- 121
           ++WKERG G  + LKHKETGK RLVMR+ KTLK+CANHL++P M +  +VG+D+S VW  
Sbjct: 111 SEWKERGTGDARLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWTV 170

Query: 122 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKK 161
           A D ++GE   E F IRF + EN   F E F++  E   K
Sbjct: 171 AADVSEGEPTAETFAIRFANSENANLFKENFEKYQEENAK 210

[Close]

BLAST of Carg26030 vs. ExPASy Swiss-Prot
Match: P41920 (Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YRB1 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.6e-30
Identity = 72/159 (45.28%), Postives = 102/159 (64.15%), Query Frame = 0


Query: 5   DTERREEEEAPAAED--EDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKDGN 64
           D E  +EE     +D  E       P+V LE+V V T EE+E+ +  +++KL+RFD D  
Sbjct: 42  DEEDTKEETKKEGDDAPESPDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAK 101

Query: 65  QWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWHAT 124
           +WKERG G  KFLK+K+T KVR++MR+ KTLKICANH++ P  +++ +VG+D+S V+  T
Sbjct: 102 EWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACT 161

Query: 125 -DFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKK 161
            D A+GE +   F IRF S EN   F E F++  E  KK
Sbjct: 162 ADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQEINKK 200

[Close]

BLAST of Carg26030 vs. ExPASy TrEMBL
Match: A0A6J1I4C6 (ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469534 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.1e-107
Identity = 215/218 (98.62%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60
           MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEKAEDKAEDPPVKSEEKDKPEGEAEKSDAEKKE 219
           DEKKAEKAEDKAE  PVKSEEKDKPEGEA KSDAEKKE
Sbjct: 181 DEKKAEKAEDKAEFTPVKSEEKDKPEGEAAKSDAEKKE 218

[Close]

BLAST of Carg26030 vs. ExPASy TrEMBL
Match: A0A6J1HKC3 (ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC111464892 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.0e-106
Identity = 215/222 (96.85%), Postives = 216/222 (97.30%), Query Frame = 0


Query: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60
           MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120
           GNQWKERGAGTVKFLKH+ETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHRETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEKA----EDKAEDPPVKSEEKDKPEGEAEKSDAEKKE 219
           DEKKAEKA    EDKAED PVKSEEK KPEGEAEKSDAEKKE
Sbjct: 181 DEKKAEKAEDKSEDKAEDTPVKSEEKGKPEGEAEKSDAEKKE 222

[Close]

BLAST of Carg26030 vs. ExPASy TrEMBL
Match: A0A5A7UVN5 (Ran-binding protein 1-like protein a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00850 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100
Identity = 203/219 (92.69%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPAAEDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAE-KAEDKAEDPPVKSEEKDKPEGEAEKSDAEKKE 219
           DEKKAE K+EDKAED PVKS+E+DKPEGEA KSDAEKK+
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219

[Close]

BLAST of Carg26030 vs. ExPASy TrEMBL
Match: A0A0A0LXN6 (RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532320 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100
Identity = 203/219 (92.69%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPAAEDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAE-KAEDKAEDPPVKSEEKDKPEGEAEKSDAEKKE 219
           DEKKAE K+EDKAED PVKS+E+DKPEGEA KSDAEKK+
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219

[Close]

BLAST of Carg26030 vs. ExPASy TrEMBL
Match: A0A1S3C5A9 (ran-binding protein 1 homolog a OS=Cucumis melo OX=3656 GN=LOC103497065 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100
Identity = 203/219 (92.69%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPAAEDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAE-KAEDKAEDPPVKSEEKDKPEGEAEKSDAEKKE 219
           DEKKAE K+EDKAED PVKS+E+DKPEGEA KSDAEKK+
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219

[Close]

BLAST of Carg26030 vs. TAIR 10
Match: AT1G07140.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 295.4 bits (755), Expect = 3.7e-80
Identity = 162/212 (76.42%), Postives = 181/212 (85.38%), Query Frame = 0


Query: 7   ERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKDGNQWKE 66
           E R+EEEA A EDEDTGAQVAPIV+LEEVAVTTGEE+EDA+LDLKSKLYRFDKD NQWKE
Sbjct: 9   EHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKE 68

Query: 67  RGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWHATDFAD 126
           RGAGTVKFLKHK TGK+RLVMRQSKTLKICANH V   MSVQEHVGN+KSCVWHA DFAD
Sbjct: 69  RGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFAD 128

Query: 127 GELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVEDEKKAE 186
           GELKDELFCIRF SIENCKTFM+ F+EVAES+++KEE+KDA+  AGLLEKL+VE+ K  E
Sbjct: 129 GELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTVEETKTEE 188

Query: 187 KAEDKA-EDPPVKSEEKDKPEGEAEKSDAEKK 218
           K E KA E    + + ++K E EAEKS   KK
Sbjct: 189 KTEAKAVETAKTEVKAEEKKESEAEKSGEAKK 220

[Close]

BLAST of Carg26030 vs. TAIR 10
Match: AT2G30060.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 281.6 bits (719), Expect = 5.5e-76
Identity = 155/211 (73.46%), Postives = 175/211 (82.94%), Query Frame = 0


Query: 5   DTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKDGNQW 64
           + E R+EEE  A EDEDTGAQVAPIV+LEEVAVTTGEE+ED ILDLKSKLYRFDKDG+QW
Sbjct: 9   ERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQW 68

Query: 65  KERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWHATDF 124
           KERGAGTVKFLKH+ +GK+RLVMRQSKTLKICANHLV   MSVQEH GNDKSCVWHA DF
Sbjct: 69  KERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDF 128

Query: 125 ADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVEDEKK 184
           +DGELKDELFCIRF S+ENCK FM+ F+EVAES+++KEE+KDAS  AGLLEKL+VE EK+
Sbjct: 129 SDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVE-EKE 188

Query: 185 AEKAEDKAEDPPVKSEEKDKPEGEAEKSDAE 216
           +EK       P  K+EE  K E   EK   E
Sbjct: 189 SEK------KPVEKAEENKKSEAVEEKKTEE 212

[Close]

BLAST of Carg26030 vs. TAIR 10
Match: AT5G58590.1 (RAN binding protein 1 )

HSP 1 Score: 276.2 bits (705), Expect = 2.3e-74
Identity = 150/216 (69.44%), Postives = 173/216 (80.09%), Query Frame = 0


Query: 1   MASADTER-REEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDK 60
           MAS + ER   E+E    EDEDTGAQVAPIV+LEEVAVTTGEE+EDA+LDLKSK+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVW 120
           +GNQWKERGAGTVK LKHKETGKVRLVMRQSKTLKICANHL+   MSVQEH GN+KSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSV 180
           HATDF+DGELKDELFCIRF SIENCKTFME F E+AESQ+  +E+     AAGL+E LSV
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 EDEKKAEKAEDKAEDPPVKSEEKDKPEGEAEKSDAE 216
           E+    EKA++  E  P K +++ K E   E+   E
Sbjct: 181 EENISEEKAKEAEEKEPAKEDKETKKEKVEEEKKTE 216

[Close]

BLAST of Carg26030 vs. TAIR 10
Match: AT3G15970.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06
Identity = 43/141 (30.50%), Postives = 66/141 (46.81%), Query Frame = 0


Query: 33  EEVAVTTGEENEDAILDLKSKLYRFDKDGNQWKERGAGTVKF-LKHKETGKVRLVMRQSK 92
           ++V+V TGEENE A     S ++ + + G  WKERG G +K  +   E  K RLVMR   
Sbjct: 320 QDVSVETGEENEKAAFTADSVMFEYLEGG--WKERGKGELKVNISTTENRKARLVMRSKG 379

Query: 93  TLKICANHLVLPSMSV--QEHVGNDKSCVWHATDFADGELKDELFCIRFPSIENCKTFME 152
             ++  N  + P M +   +  G   +CV   +D  DG        ++F       T +E
Sbjct: 380 NYRLTLNASLYPEMKLAKMDKKGITFACVNSVSDAKDGL---STLALKFKD----PTVVE 439

Query: 153 TFQEVAESQKKKEENKDASAA 171
            F+ V E  K  + +   +AA
Sbjct: 440 EFRAVIEEHKDSKPSVAEAAA 451

The following BLAST results are available for this feature:

BLAST of Carg26030 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583353.1	9.3e-110	100.00	Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022970593.1	4.3e-107	98.62	ran-binding protein 1 homolog a-like [Cucurbita maxima]	[more]
XP_023519267.1	7.4e-107	97.71	ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo]	[more]
XP_022964941.1	6.2e-106	96.85	ran-binding protein 1 homolog a-like [Cucurbita moschata]	[more]
XP_008457357.1	2.3e-100	92.69	PREDICTED: ran-binding protein 1 homolog a [Cucumis melo] >XP_011658664.2 ran-bi...	[more]

BLAST of Carg26030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMK7	5.2e-79	76.42	Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 ...	[more]
Q8RWG8	7.7e-75	73.46	Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 ...	[more]
P92985	3.2e-73	69.44	Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 ...	[more]
Q09717	1.1e-31	46.25	Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 97...	[more]
P41920	7.6e-30	45.28	Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of Carg26030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I4C6	2.1e-107	98.62	ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469534...	[more]
A0A6J1HKC3	3.0e-106	96.85	ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC1114648...	[more]
A0A5A7UVN5	1.1e-100	92.69	Ran-binding protein 1-like protein a-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A0A0LXN6	1.1e-100	92.69	RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532320 PE=4...	[more]
A0A1S3C5A9	1.1e-100	92.69	ran-binding protein 1 homolog a OS=Cucumis melo OX=3656 GN=LOC103497065 PE=4 SV=...	[more]

BLAST of Carg26030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07140.1	3.7e-80	76.42	Pleckstrin homology (PH) domain superfamily protein	[more]
AT2G30060.1	5.5e-76	73.46	Pleckstrin homology (PH) domain superfamily protein	[more]
AT5G58590.1	2.3e-74	69.44	RAN binding protein 1	[more]
AT3G15970.1	1.2e-06	30.50	NUP50 (Nucleoporin 50 kDa) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 26..154 e-value: 5.1E-41 score: 152.3
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 37..154 e-value: 1.1E-39 score: 135.5
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 25..160 score: 34.744366
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 9..173 e-value: 3.3E-54 score: 184.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR23138:SF156	RAN-BINDING PROTEIN 1 HOMOLOG C-LIKE	coord: 6..218
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 6..218
None	No IPR available	CDD	cd13179	RanBD_RanBP1	coord: 23..156 e-value: 1.55481E-68 score: 204.34
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 24..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26030-RA	Carg26030-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0005096	GTPase activator activity