Carg25979 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25979
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	heat stress transcription factor B-4b-like
Location	Carg_Chr11: 4594620 .. 4595894 (-)
RNA-Seq Expression	Carg25979
Synteny	Carg25979

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAGATGATTGAAGGTGATAAGCCAAATCCAGCGCCATTTTTGACCAAAACCTATGATTTGGTGGATGATCCTCGCACTGATCATGTTGTTTCTTGGGGCCAATCTCATTCCACCTTTGTTGTTTGGAGCCCTCCTGAGTTTGCTACTCATGTTCTTCCCAACTACTTCAAACACAACAATTTCTCTAGCTTTGTTCGTCAACTCAACACTTACGTACGTATCTGCCTCGTTCTCTTGTTCTTGTTCTCGTTCTTGTTCTTGTTCTCTGTCTTTGAGAGAGTTTGAACTTATGGTTTATGGAGAAGGATAGTTCTCGTGTATAATTAACCATCTGGGTCTAGGCCGACTTCCTCTCATGGGATTCTTTAGCCTAAAGGGATGCATGAGATGTTTTCAATCTAGATAGAATTTAAACCTCGGGTCCATGAATGAGACGTCAGTGTCCAATCATTACGAACTATGCTTAGATTAGCTTTTTTTTTTTATCGGATTTGAACCTACAAGAGACCGTAGCATTTAATCGTCATCTAACTAGCTAGAGAGATTCGTTATGAGATTCAAACTTACTAACGCTCGAGAGCAGATATCAATGTCCAAACAGTTGAGTTTATGCTTGGTATAGCGTTATATATTGTTTGACGTTTTTTTCAATCCTTAGAACAAATGAAGCCAAAAACGATTTGATTGACGTTTTTTTCAAAGTAGAATTCAAACCCATGATTCGTTAATGTTAATCGATTACGCTATGCTCGAGTTAGTGAATAATTTGATTGTGATTGACAGGGATTCAAGAAAGTAGTAGCAGAGAGATGGGAATTTGGGAACGAAAACTTCAAGAAAGGAGAGAAACAATTACTCTCACAGATTCACAGAAGAAAATCTCATAATTACAATAATAATAATAATAACAATCTCCAATTCTTCCATGTACACGGCGAGCTCTTCACCGCCACTTCCTCCTCCGATTCCGACGTGCTGGCGGCGCTGATGCAAGACAACCGGCGTCTACGACGGAGGAACTTCATGCTGCTATCGGAGCTGACCCAGATGAAGAATCTCTACTCGGACATCATATACTTCATCCAAAACCACGTGAAGCCATTTGATCAGAGAAACGGGAAATGGGTGGCGAAGTTGGTGGAGTTGGAGGCTCCGCCGCCGCAAGTAGCGGTGGCTAAGGCGGCGGGGGAATCAGAAGAGGTGAAGCTATTTGGGGTTCCGATTAGAGGGAAGAAGAGAGGAGCTTCAGATGAAGAGGATAGAGTTTGA

mRNA sequence

ATGGAGCAGATGATTGAAGGTGATAAGCCAAATCCAGCGCCATTTTTGACCAAAACCTATGATTTGGTGGATGATCCTCGCACTGATCATGTTGTTTCTTGGGGCCAATCTCATTCCACCTTTGTTGTTTGGAGCCCTCCTGAGTTTGCTACTCATGTTCTTCCCAACTACTTCAAACACAACAATTTCTCTAGCTTTGTTCGTCAACTCAACACTTACGGATTCAAGAAAGTAGTAGCAGAGAGATGGGAATTTGGGAACGAAAACTTCAAGAAAGGAGAGAAACAATTACTCTCACAGATTCACAGAAGAAAATCTCATAATTACAATAATAATAATAATAACAATCTCCAATTCTTCCATGTACACGGCGAGCTCTTCACCGCCACTTCCTCCTCCGATTCCGACGTGCTGGCGGCGCTGATGCAAGACAACCGGCGTCTACGACGGAGGAACTTCATGCTGCTATCGGAGCTGACCCAGATGAAGAATCTCTACTCGGACATCATATACTTCATCCAAAACCACGTGAAGCCATTTGATCAGAGAAACGGGAAATGGGTGGCGAAGTTGGTGGAGTTGGAGGCTCCGCCGCCGCAAGTAGCGGTGGCTAAGGCGGCGGGGGAATCAGAAGAGGTGAAGCTATTTGGGGTTCCGATTAGAGGGAAGAAGAGAGGAGCTTCAGATGAAGAGGATAGAGTTTGA

Coding sequence (CDS)

ATGGAGCAGATGATTGAAGGTGATAAGCCAAATCCAGCGCCATTTTTGACCAAAACCTATGATTTGGTGGATGATCCTCGCACTGATCATGTTGTTTCTTGGGGCCAATCTCATTCCACCTTTGTTGTTTGGAGCCCTCCTGAGTTTGCTACTCATGTTCTTCCCAACTACTTCAAACACAACAATTTCTCTAGCTTTGTTCGTCAACTCAACACTTACGGATTCAAGAAAGTAGTAGCAGAGAGATGGGAATTTGGGAACGAAAACTTCAAGAAAGGAGAGAAACAATTACTCTCACAGATTCACAGAAGAAAATCTCATAATTACAATAATAATAATAATAACAATCTCCAATTCTTCCATGTACACGGCGAGCTCTTCACCGCCACTTCCTCCTCCGATTCCGACGTGCTGGCGGCGCTGATGCAAGACAACCGGCGTCTACGACGGAGGAACTTCATGCTGCTATCGGAGCTGACCCAGATGAAGAATCTCTACTCGGACATCATATACTTCATCCAAAACCACGTGAAGCCATTTGATCAGAGAAACGGGAAATGGGTGGCGAAGTTGGTGGAGTTGGAGGCTCCGCCGCCGCAAGTAGCGGTGGCTAAGGCGGCGGGGGAATCAGAAGAGGTGAAGCTATTTGGGGTTCCGATTAGAGGGAAGAAGAGAGGAGCTTCAGATGAAGAGGATAGAGTTTGA

Protein sequence

MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKHNNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNLQFFHVHGELFTATSSSDSDVLAALMQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVKPFDQRNGKWVAKLVELEAPPPQVAVAKAAGESEEVKLFGVPIRGKKRGASDEEDRV

Homology

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BLAST of Carg25979 vs. NCBI nr
Match: KAG7022143.1 (Heat stress transcription factor B-4b, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 474.6 bits (1220), Expect = 5.1e-130
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH 60
           MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH
Sbjct: 1   MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH 60

Query: 61  NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNLQFF 120
           NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNLQFF
Sbjct: 61  NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNLQFF 120

Query: 121 HVHGELFTATSSSDSDVLAALMQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVKPF 180
           HVHGELFTATSSSDSDVLAALMQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVKPF
Sbjct: 121 HVHGELFTATSSSDSDVLAALMQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVKPF 180

Query: 181 DQRNGKWVAKLVELEAPPPQVAVAKAAGESEEVKLFGVPIRGKKRGASDEEDRV 235
           DQRNGKWVAKLVELEAPPPQVAVAKAAGESEEVKLFGVPIRGKKRGASDEEDRV
Sbjct: 181 DQRNGKWVAKLVELEAPPPQVAVAKAAGESEEVKLFGVPIRGKKRGASDEEDRV 234

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BLAST of Carg25979 vs. NCBI nr
Match: XP_022925361.1 (heat stress transcription factor B-4b-like [Cucurbita moschata])

HSP 1 Score: 468.4 bits (1204), Expect = 3.6e-128
Identity = 231/234 (98.72%), Postives = 232/234 (99.15%), Query Frame = 0


Query: 1   MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH 60
           MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPE ATHVLPNYFKH
Sbjct: 1   MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPELATHVLPNYFKH 60

Query: 61  NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNLQFF 120
           NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNLQFF
Sbjct: 61  NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNLQFF 120

Query: 121 HVHGELFTATSSSDSDVLAALMQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVKPF 180
           HVHGELFTATSSSDSDVLAAL QDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVKPF
Sbjct: 121 HVHGELFTATSSSDSDVLAALTQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVKPF 180

Query: 181 DQRNGKWVAKLVELEAPPPQVAVAKAAGESEEVKLFGVPIRGKKRGASDEEDRV 235
           DQRNGKWVAKLVELEAPPPQVAVA+AAGESEEVKLFGVPIRGKKRGASDEEDRV
Sbjct: 181 DQRNGKWVAKLVELEAPPPQVAVAEAAGESEEVKLFGVPIRGKKRGASDEEDRV 234

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BLAST of Carg25979 vs. NCBI nr
Match: KAG6588229.1 (Heat stress transcription factor B-4b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 464.5 bits (1194), Expect = 5.3e-127
Identity = 231/237 (97.47%), Postives = 233/237 (98.31%), Query Frame = 0


Query: 1   MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH 60
           MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH
Sbjct: 1   MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH 60

Query: 61  NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNY---NNNNNNNL 120
           NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNY   NNNNNNNL
Sbjct: 61  NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNNNNL 120

Query: 121 QFFHVHGELFTATSSSDSDVLAALMQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHV 180
           QFFHVHGELFTATSSSDSDVLAAL QDNRRLRRRNFML+SELTQMKNLYSDIIYFIQNHV
Sbjct: 121 QFFHVHGELFTATSSSDSDVLAALTQDNRRLRRRNFMLISELTQMKNLYSDIIYFIQNHV 180

Query: 181 KPFDQRNGKWVAKLVELEAPPPQVAVAKAAGESEEVKLFGVPIRGKKRGASDEEDRV 235
           KPFDQRNGKWVAKLVELEAPPPQVAVA+AAGESEEVKLFGVPIRGKKRGASDEEDRV
Sbjct: 181 KPFDQRNGKWVAKLVELEAPPPQVAVAEAAGESEEVKLFGVPIRGKKRGASDEEDRV 237

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BLAST of Carg25979 vs. NCBI nr
Match: XP_023531680.1 (heat stress transcription factor B-4b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 464.5 bits (1194), Expect = 5.3e-127
Identity = 231/236 (97.88%), Postives = 233/236 (98.73%), Query Frame = 0


Query: 1   MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH 60
           MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH
Sbjct: 1   MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH 60

Query: 61  NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNN--NNLQ 120
           NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNN  NNLQ
Sbjct: 61  NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNTNNLQ 120

Query: 121 FFHVHGELFTATSSSDSDVLAALMQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVK 180
           FFH+HGELFTATSSSDSDVLAAL QDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVK
Sbjct: 121 FFHLHGELFTATSSSDSDVLAALTQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVK 180

Query: 181 PFDQRNGKWVAKLVELEAPPPQVAVAKAAGESEEVKLFGVPIRGKKRGASDEEDRV 235
           PFDQRNGKWVAKLVELEAPPPQVAVA+AAGESEEVKLFGVPIRGKKRGASDEEDRV
Sbjct: 181 PFDQRNGKWVAKLVELEAPPPQVAVAEAAGESEEVKLFGVPIRGKKRGASDEEDRV 236

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BLAST of Carg25979 vs. NCBI nr
Match: XP_022974122.1 (heat stress transcription factor B-4b-like [Cucurbita maxima])

HSP 1 Score: 452.2 bits (1162), Expect = 2.7e-123
Identity = 226/236 (95.76%), Postives = 229/236 (97.03%), Query Frame = 0


Query: 1   MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH 60
           MEQ IEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH
Sbjct: 1   MEQKIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH 60

Query: 61  NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNN--NNNNLQ 120
           NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNN  NNNNLQ
Sbjct: 61  NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNINNNNLQ 120

Query: 121 FFHVHGELFTATSSSDSDVLAALMQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVK 180
           FFH+  ELFTATSSSDSD+LAAL QDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVK
Sbjct: 121 FFHLQDELFTATSSSDSDMLAALTQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVK 180

Query: 181 PFDQRNGKWVAKLVELEAPPPQVAVAKAAGESEEVKLFGVPIRGKKRGASDEEDRV 235
            FDQRNGKWVAKLVELEAPPPQVAVA+AAGESEEVKLFGVPIRGKKRGASDEEDRV
Sbjct: 181 AFDQRNGKWVAKLVELEAPPPQVAVAEAAGESEEVKLFGVPIRGKKRGASDEEDRV 236

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BLAST of Carg25979 vs. ExPASy Swiss-Prot
Match: Q7XHZ0 (Heat stress transcription factor B-4b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB4B PE=1 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 9.2e-58
Identity = 130/272 (47.79%), Postives = 162/272 (59.56%), Query Frame = 0


Query: 9   KPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKHNNFSSFVR 68
           KP PAPFLTKTY LVDDP TDH+VSWG+  +TFVVW PPEFA  +LPNYFKHNNFSSFVR
Sbjct: 29  KPVPAPFLTKTYQLVDDPCTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVR 88

Query: 69  QLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKS-------------HNYNNNNNN 128
           QLNTYGF+K+VA+RWEF NE F+KG K LL++IHRRKS             H++++ N  
Sbjct: 89  QLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPPPPPMPHQPYHHHHHLNPF 148

Query: 129 NL----QFFHVHGEL-----------FTATSSSDSDVLAALMQDNRRLRRRNFMLLSELT 188
           +L      +H H  +                    D LAAL +DNR+LRRRN +LLSEL 
Sbjct: 149 SLPPPPPAYHHHHLIQEEPATTAHCTVAGDGGEGGDFLAALSEDNRQLRRRNSLLLSELA 208

Query: 189 QMKNLYSDIIYFIQNHVKPFDQRN----------------GKWVAKLVELE----APPPQ 233
            MK LY+DIIYF+QNHV P                          +L+EL+    +PPP 
Sbjct: 209 HMKKLYNDIIYFLQNHVAPVTTTTTTPSSTAMAAAQHHLPAAASCRLMELDSPDHSPPPP 268

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BLAST of Carg25979 vs. ExPASy Swiss-Prot
Match: Q10KX8 (Heat stress transcription factor B-4d OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB4D PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.4e-52
Identity = 124/255 (48.63%), Postives = 157/255 (61.57%), Query Frame = 0


Query: 12  PAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKHNNFSSFVRQLN 71
           PAPFL+KTY LVDDP TD VVSWG+  +TFVVW PPEFA  +LPNYFKHNNFSSFVRQLN
Sbjct: 34  PAPFLSKTYQLVDDPSTDDVVSWGEDEATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLN 93

Query: 72  TYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHN---------YNNNNNNNLQFF-- 131
           TYGF+K+VA+RWEF NE F+KG K LLS+IHRRKS +         +  + +  L  F  
Sbjct: 94  TYGFRKIVADRWEFANEFFRKGAKHLLSEIHRRKSSSCSQPQPPPPFPMHQHYPLSLFSP 153

Query: 132 -----------------HVHGELFTAT---SSSDSDVLAALMQDNRRLRRRNFMLLSELT 191
                            H   E  ++    +    D+LAAL +DNR+LRRRN +LLSEL 
Sbjct: 154 PTTPRSPPVGAAAAAAYHFQEEYCSSPADYAGGGGDLLAALSEDNRQLRRRNSLLLSELA 213

Query: 192 QMKNLYSDIIYFIQNHVKPF--DQRNGKWVAKLVEL--EAPPPQVAVAKAAGESEE---V 226
            M+ LY+DIIYF+QNHV+P            +LVEL       +   A  +G++++   V
Sbjct: 214 HMRKLYNDIIYFLQNHVEPVAPPPLAAATSCRLVELGPSTTERRRCAASPSGDNDDDAAV 273

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BLAST of Carg25979 vs. ExPASy Swiss-Prot
Match: Q9C635 (Heat stress transcription factor B-4 OS=Arabidopsis thaliana OX=3702 GN=HSFB4 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.4e-50
Identity = 112/220 (50.91%), Postives = 132/220 (60.00%), Query Frame = 0


Query: 1   MEQMIEGD-KPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFK 60
           ++ M+EG  K  PAPFLTKTY LVDDP TDHVVSWG   +TFVVW PPEFA  +LPNYFK
Sbjct: 20  IQLMVEGQGKAVPAPFLTKTYQLVDDPATDHVVSWGDDDTTFVVWRPPEFARDLLPNYFK 79

Query: 61  HNNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNLQF 120
           HNNFSSFVRQLNTYGF+K+V +RWEF NE FK+GEK LL +IHRRK+       ++    
Sbjct: 80  HNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKRGEKHLLCEIHRRKTSQMIPQQHSPFMS 139

Query: 121 FH--------VHGELF------TATSSSD---------------------SDVLAALMQD 180
            H          G  F        T   D                     +  + AL +D
Sbjct: 140 HHHAPPQIPFSGGSFFPLPPPRVTTPEEDHYWCDDSPPSRPRVIPQQIDTAAQVTALSED 199

Query: 181 NRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVKPFDQRN 185
           N RLRR N +L+SEL  MK LY+DIIYF+QNHVKP    N
Sbjct: 200 NERLRRSNTVLMSELAHMKKLYNDIIYFVQNHVKPVAPSN 239

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BLAST of Carg25979 vs. ExPASy Swiss-Prot
Match: Q67U94 (Heat stress transcription factor B-4c OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB4C PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 7.3e-47
Identity = 111/232 (47.84%), Postives = 132/232 (56.90%), Query Frame = 0


Query: 9   KPNPAPFLTKTYDLVDDPRTDHVVSWGQSH-STFVVWSPPEFATHVLPNYFKHNNFSSFV 68
           K  PAPFLTKTY LVDDP TDH+VSWG    STFVVW PPEFA  +LPNYFKHNNFSSFV
Sbjct: 19  KAVPAPFLTKTYQLVDDPATDHIVSWGDDRVSTFVVWRPPEFARDILPNYFKHNNFSSFV 78

Query: 69  RQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNLQFF------- 128
           RQLNTYGF+KVV ERWEF NE F+KGEKQLL++IHRRK+ + +  + +   FF       
Sbjct: 79  RQLNTYGFRKVVPERWEFANEFFRKGEKQLLTEIHRRKTSSASTASPSPPPFFAPPHFPL 138

Query: 129 ----------HVH-------------------------------------GELFTATSSS 180
                     H H                                     G    + SS+
Sbjct: 139 FHHPGVAAAQHHHAFVGDDGVVAAHGIGMPFPQPHWREPNLPVATRLLALGGPAPSPSSA 198

[Close]

BLAST of Carg25979 vs. ExPASy Swiss-Prot
Match: Q6Z9R8 (Putative heat stress transcription factor B-4a OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB4A PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.0e-45
Identity = 111/225 (49.33%), Postives = 131/225 (58.22%), Query Frame = 0


Query: 12  PAPFLTKTYDLVDDPRTDHVVSW-----GQSHSTFVVWSPPEFATHVLPNYFKHNNFSSF 71
           PAPFLTKTY LVDDP TDHVVSW     G+S S+FVVW PPEFA  +LPNYFKH+NFSSF
Sbjct: 23  PAPFLTKTYQLVDDPATDHVVSWEDDDGGESASSFVVWRPPEFARDILPNYFKHSNFSSF 82

Query: 72  VRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHN-------------YNNNN 131
           VRQLNTYGF+KVV ERWEF NE F+KGEKQLL +IHRRKS               +   +
Sbjct: 83  VRQLNTYGFRKVVPERWEFANEFFRKGEKQLLCEIHRRKSAAATWPPFPPPPPPFFAPRH 142

Query: 132 NNNLQFFH-----VHGELFTATSSSD----------------------SDVLA------- 180
                FF      +HG L    ++++                        V+A       
Sbjct: 143 FAAGAFFRHGDGMLHGRLGALVTTTERRHWFESAALPVAPSSRLLSQLGPVIAPARRAAA 202

[Close]

BLAST of Carg25979 vs. ExPASy TrEMBL
Match: A0A6J1EC03 (heat stress transcription factor B-4b-like OS=Cucurbita moschata OX=3662 GN=LOC111432655 PE=3 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 1.8e-128
Identity = 231/234 (98.72%), Postives = 232/234 (99.15%), Query Frame = 0


Query: 1   MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH 60
           MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPE ATHVLPNYFKH
Sbjct: 1   MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPELATHVLPNYFKH 60

Query: 61  NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNLQFF 120
           NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNLQFF
Sbjct: 61  NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNLQFF 120

Query: 121 HVHGELFTATSSSDSDVLAALMQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVKPF 180
           HVHGELFTATSSSDSDVLAAL QDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVKPF
Sbjct: 121 HVHGELFTATSSSDSDVLAALTQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVKPF 180

Query: 181 DQRNGKWVAKLVELEAPPPQVAVAKAAGESEEVKLFGVPIRGKKRGASDEEDRV 235
           DQRNGKWVAKLVELEAPPPQVAVA+AAGESEEVKLFGVPIRGKKRGASDEEDRV
Sbjct: 181 DQRNGKWVAKLVELEAPPPQVAVAEAAGESEEVKLFGVPIRGKKRGASDEEDRV 234

[Close]

BLAST of Carg25979 vs. ExPASy TrEMBL
Match: A0A6J1I9E7 (heat stress transcription factor B-4b-like OS=Cucurbita maxima OX=3661 GN=LOC111472724 PE=3 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.3e-123
Identity = 226/236 (95.76%), Postives = 229/236 (97.03%), Query Frame = 0


Query: 1   MEQMIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH 60
           MEQ IEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH
Sbjct: 1   MEQKIEGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH 60

Query: 61  NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNN--NNNNLQ 120
           NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNN  NNNNLQ
Sbjct: 61  NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNINNNNLQ 120

Query: 121 FFHVHGELFTATSSSDSDVLAALMQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVK 180
           FFH+  ELFTATSSSDSD+LAAL QDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVK
Sbjct: 121 FFHLQDELFTATSSSDSDMLAALTQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVK 180

Query: 181 PFDQRNGKWVAKLVELEAPPPQVAVAKAAGESEEVKLFGVPIRGKKRGASDEEDRV 235
            FDQRNGKWVAKLVELEAPPPQVAVA+AAGESEEVKLFGVPIRGKKRGASDEEDRV
Sbjct: 181 AFDQRNGKWVAKLVELEAPPPQVAVAEAAGESEEVKLFGVPIRGKKRGASDEEDRV 236

[Close]

BLAST of Carg25979 vs. ExPASy TrEMBL
Match: A0A6J1DH11 (heat stress transcription factor B-4b-like OS=Momordica charantia OX=3673 GN=LOC111020798 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 4.1e-85
Identity = 173/251 (68.92%), Postives = 195/251 (77.69%), Query Frame = 0


Query: 2   EQMIEGD-KPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKH 61
           E +IE D K NPAPFLTKTYDLV+DPRTDH+VSWGQSH+TFVVW PPEFA+HVLPNYFKH
Sbjct: 3   ENIIECDQKGNPAPFLTKTYDLVEDPRTDHIVSWGQSHTTFVVWRPPEFASHVLPNYFKH 62

Query: 62  NNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSH-NYNNNNNNNL-- 121
           NNFSSFVRQLNTYGFKK+VA+RWEFGNENFKKGEK+LLS+IHRRKSH N+N NNNNN+  
Sbjct: 63  NNFSSFVRQLNTYGFKKIVADRWEFGNENFKKGEKKLLSEIHRRKSHNNHNINNNNNINI 122

Query: 122 ----------QFFHVHGELFT-----ATSSSDSDVLAALMQDNRRLRRRNFMLLSELTQM 181
                     QFFH+  E  T     AT+++DSD+L AL QDNRRLRRRN+MLLSEL QM
Sbjct: 123 NSHHQNPLFHQFFHLDHEPLTLYYTAATAAADSDILEALTQDNRRLRRRNYMLLSELAQM 182

Query: 182 KNLYSDIIYFIQNHVKPFDQRNGK--WVAKLVELEAPPPQVAVAKAAGESE-EVKLFGVP 231
           KNLYSDIIYFIQNHV P   +  +   V KLVEL++PPP  A     G     VKLFGVP
Sbjct: 183 KNLYSDIIYFIQNHVSPLQHKTARSSSVPKLVELDSPPPPPAAGPEEGNGNGTVKLFGVP 242

[Close]

BLAST of Carg25979 vs. ExPASy TrEMBL
Match: A0A6J1H9F1 (heat stress transcription factor B-4b-like OS=Cucurbita moschata OX=3662 GN=LOC111461714 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 5.9e-84
Identity = 166/232 (71.55%), Postives = 182/232 (78.45%), Query Frame = 0


Query: 6   EGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKHNNFSS 65
           E +K NPAPFL KTY+LV+D  TDH+VSWG SH+TFVVW PPEFATH+LPNYFKHNNFSS
Sbjct: 16  ESEKANPAPFLAKTYELVEDATTDHIVSWGHSHTTFVVWRPPEFATHILPNYFKHNNFSS 75

Query: 66  FVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNN----LQFFH 125
           FVRQLNTYGFKK+VAERWEFGNENFKKGEKQLL  I RRKSHN+NNN +       QF +
Sbjct: 76  FVRQLNTYGFKKIVAERWEFGNENFKKGEKQLLLAIQRRKSHNHNNNLHQQQQIPFQFCY 135

Query: 126 VHGELFTAT---SSSDSDVLAALMQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVK 185
                 T T   SSSD D+LAAL QDNRRLRRRN+MLLSELTQMKNLYSDIIYFIQNHVK
Sbjct: 136 TTAAAATTTTSSSSSDRDILAALTQDNRRLRRRNYMLLSELTQMKNLYSDIIYFIQNHVK 195

Query: 186 PFDQRNGKWVAKLVELEAPPPQVAVAKAAGESEEVKLFGVPIRGKKRGASDE 231
           P D + G+ V KLV+LE PPPQ       G S  VKLFGVPIRGKKR   +E
Sbjct: 196 PLDHKYGRSVPKLVDLEPPPPQTEAGVEEG-SGSVKLFGVPIRGKKRMHHEE 246

[Close]

BLAST of Carg25979 vs. ExPASy TrEMBL
Match: A0A6J1JGJ8 (heat stress transcription factor B-4b-like OS=Cucurbita maxima OX=3661 GN=LOC111485507 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 2.1e-81
Identity = 159/231 (68.83%), Postives = 182/231 (78.79%), Query Frame = 0


Query: 6   EGDKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKHNNFSS 65
           E  K NPAPFL KTY+LV+D  TDH+VSWG+SH+TFVVW PPEFATH+LPNYFKHNNFSS
Sbjct: 16  ESQKANPAPFLAKTYELVEDAATDHIVSWGRSHTTFVVWRPPEFATHILPNYFKHNNFSS 75

Query: 66  FVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNLQF---FHV 125
           FVRQLN+YGFKK+VA+RWEFGN+NFKKGEKQLL +I RRK HN+NNN +   Q    F  
Sbjct: 76  FVRQLNSYGFKKIVAKRWEFGNQNFKKGEKQLLLEIQRRKPHNHNNNLHQQQQIPFQFCY 135

Query: 126 HGELFTATSSSDSDVLAALMQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVKPFDQ 185
                T++SSSD D+LAAL QDNRRLRRRN+MLLSELTQMKNLYSDIIYFIQNHVKP D 
Sbjct: 136 TAAAATSSSSSDPDILAALTQDNRRLRRRNYMLLSELTQMKNLYSDIIYFIQNHVKPLDH 195

Query: 186 RNGKWVAKLVELEAPPPQVAVAKAAGESE---EVKLFGVPIRGKKRGASDE 231
           + G+ V KLV+L+ PPP       AG  E    V+LFGVPIRGKKR   +E
Sbjct: 196 KYGRSVPKLVDLKPPPPPPPPQTEAGVEEGSGSVQLFGVPIRGKKRVHHEE 246

[Close]

BLAST of Carg25979 vs. TAIR 10
Match: AT1G46264.1 (heat shock transcription factor B4 )

HSP 1 Score: 200.3 bits (508), Expect = 1.7e-51
Identity = 112/220 (50.91%), Postives = 132/220 (60.00%), Query Frame = 0


Query: 1   MEQMIEGD-KPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFK 60
           ++ M+EG  K  PAPFLTKTY LVDDP TDHVVSWG   +TFVVW PPEFA  +LPNYFK
Sbjct: 20  IQLMVEGQGKAVPAPFLTKTYQLVDDPATDHVVSWGDDDTTFVVWRPPEFARDLLPNYFK 79

Query: 61  HNNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNLQF 120
           HNNFSSFVRQLNTYGF+K+V +RWEF NE FK+GEK LL +IHRRK+       ++    
Sbjct: 80  HNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKRGEKHLLCEIHRRKTSQMIPQQHSPFMS 139

Query: 121 FH--------VHGELF------TATSSSD---------------------SDVLAALMQD 180
            H          G  F        T   D                     +  + AL +D
Sbjct: 140 HHHAPPQIPFSGGSFFPLPPPRVTTPEEDHYWCDDSPPSRPRVIPQQIDTAAQVTALSED 199

Query: 181 NRRLRRRNFMLLSELTQMKNLYSDIIYFIQNHVKPFDQRN 185
           N RLRR N +L+SEL  MK LY+DIIYF+QNHVKP    N
Sbjct: 200 NERLRRSNTVLMSELAHMKKLYNDIIYFVQNHVKPVAPSN 239

[Close]

BLAST of Carg25979 vs. TAIR 10
Match: AT5G62020.1 (heat shock transcription factor B2A )

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-39
Identity = 103/262 (39.31%), Postives = 148/262 (56.49%), Query Frame = 0


Query: 1   MEQMIEGDKPN----PAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPN 60
           ++ MI G+  +    P PFLTKT++LV+D   D V+SW +  S+F+VW+P +FA  +LP 
Sbjct: 6   VDAMITGESSSQRSIPTPFLTKTFNLVEDSSIDDVISWNEDGSSFIVWNPTDFAKDLLPK 65

Query: 61  YFKHNNFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRK----------- 120
           +FKHNNFSSFVRQLNTYGFKKVV +RWEF N+ FK+GEK+LL +I RRK           
Sbjct: 66  HFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLREIQRRKITTTHQTVVAP 125

Query: 121 -------------SHNYNNNNNNNLQFFHVHGELFTATSSSDSDVLAA-LMQDNRRLRRR 180
                        S++  +NNNN +            T ++ +  L+  L+++N +LR +
Sbjct: 126 SSEQRNQTMVVSPSNSGEDNNNNQVMSSSPSSWYCHQTKTTGNGGLSVELLEENEKLRSQ 185

Query: 181 NFMLLSELTQMKNLYSDIIYFIQNHV--KPFDQRNGKWVAKLVELEAPPPQVAVAKAAGE 230
           N  L  ELTQMK++  +I   + N+V  +P D+      +    +E  P +        E
Sbjct: 186 NIQLNRELTQMKSICDNIYSLMSNYVGSQPTDRSYSPGGSSSQPMEFLPAKRFSEMEIEE 245

[Close]

BLAST of Carg25979 vs. TAIR 10
Match: AT4G17750.1 (heat shock factor 1 )

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-35
Identity = 82/191 (42.93%), Postives = 120/191 (62.83%), Query Frame = 0


Query: 12  PAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKHNNFSSFVRQLN 71
           P PFL+KTYD+V+DP TD +VSW  ++++F+VW PPEF+  +LP YFKHNNFSSFVRQLN
Sbjct: 50  PPPFLSKTYDMVEDPATDAIVSWSPTNNSFIVWDPPEFSRDLLPKYFKHNNFSSFVRQLN 109

Query: 72  TYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKS---HNYNNNNNNNLQFFHVHGELFT 131
           TYGF+KV  +RWEF NE F +G+K LL +I RRKS   H  +++N  + Q     G +  
Sbjct: 110 TYGFRKVDPDRWEFANEGFLRGQKHLLKKISRRKSVQGHGSSSSNPQSQQLSQGQGSM-A 169

Query: 132 ATSSSDSDVLAALMQDNRRLRRRNFMLLSELT---QMKNLYSDIIYFIQNHVKPFDQRNG 191
           A SS        L ++  +L+R   +L+ EL    Q +    + +  +  H++  +QR  
Sbjct: 170 ALSSCVEVGKFGLEEEVEQLKRDKNVLMQELVKLRQQQQTTDNKLQVLVKHLQVMEQRQQ 229

Query: 192 K---WVAKLVE 194
           +   ++AK V+
Sbjct: 230 QIMSFLAKAVQ 239

[Close]

BLAST of Carg25979 vs. TAIR 10
Match: AT4G36990.1 (heat shock factor 4 )

HSP 1 Score: 146.0 bits (367), Expect = 3.9e-35
Identity = 93/243 (38.27%), Postives = 132/243 (54.32%), Query Frame = 0


Query: 12  PAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKHNNFSSFVRQLN 71
           PAPFL+KTY LVDD  TD VVSW +  + FVVW   EFA  +LP YFKHNNFSSF+RQLN
Sbjct: 12  PAPFLSKTYQLVDDHSTDDVVSWNEEGTAFVVWKTAEFAKDLLPQYFKHNNFSSFIRQLN 71

Query: 72  TYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKS---------HNYNNNNNNNLQFFHV 131
           TYGF+K V ++WEF N+ F++G + LL+ I RRKS             + + +N      
Sbjct: 72  TYGFRKTVPDKWEFANDYFRRGGEDLLTDIRRRKSVIASTAGKCVVVGSPSESNSGGGDD 131

Query: 132 HGELFTATSSSD------SDVLAALMQDNRRLRRRNFMLLSELTQMKNLYSDIIYFIQNH 191
           HG   T++  S        +++A L  +N +L+R N  L SEL   K    +++ F+  H
Sbjct: 132 HGSSSTSSPGSSKNPGSVENMVADLSGENEKLKRENNNLSSELAAAKKQRDELVTFLTGH 191

Query: 192 VKPFDQ------RNGKW--VAKLVELEAPPPQVAVAKAAGESEEVKLFGVPIRGKKRGAS 232
           +K   +      + GK+  V    E E            G  E +KLFGV ++G+++   
Sbjct: 192 LKVRPEQIDKMIKGGKFKPVESDEESECEGCDGGGGAEEGVGEGLKLFGVWLKGERKKRD 251

[Close]

BLAST of Carg25979 vs. TAIR 10
Match: AT3G22830.1 (heat shock transcription factor A6B )

HSP 1 Score: 144.8 bits (364), Expect = 8.6e-35
Identity = 69/117 (58.97%), Postives = 89/117 (76.07%), Query Frame = 0


Query: 3   QMIEG-DKPNPAPFLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKHN 62
           Q +EG  +  P PFLTKTYDLV+D RT+HVVSW +S+++F+VW P  F+  +LP +FKHN
Sbjct: 49  QPLEGLHESGPPPFLTKTYDLVEDSRTNHVVSWSKSNNSFIVWDPQAFSVTLLPRFFKHN 108

Query: 63  NFSSFVRQLNTYGFKKVVAERWEFGNENFKKGEKQLLSQIHRRKSHNYNNNNNNNLQ 119
           NFSSFVRQLNTYGF+KV  +RWEF NE F +G+K LL  I RRK+    +NN+N +Q
Sbjct: 109 NFSSFVRQLNTYGFRKVNPDRWEFANEGFLRGQKHLLKNIRRRKT----SNNSNQMQ 161

The following BLAST results are available for this feature:

BLAST of Carg25979 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022143.1	5.1e-130	100.00	Heat stress transcription factor B-4b, partial [Cucurbita argyrosperma subsp. ar...	[more]
XP_022925361.1	3.6e-128	98.72	heat stress transcription factor B-4b-like [Cucurbita moschata]	[more]
KAG6588229.1	5.3e-127	97.47	Heat stress transcription factor B-4b, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_023531680.1	5.3e-127	97.88	heat stress transcription factor B-4b-like [Cucurbita pepo subsp. pepo]	[more]
XP_022974122.1	2.7e-123	95.76	heat stress transcription factor B-4b-like [Cucurbita maxima]	[more]

BLAST of Carg25979 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XHZ0	9.2e-58	47.79	Heat stress transcription factor B-4b OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q10KX8	4.4e-52	48.63	Heat stress transcription factor B-4d OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q9C635	2.4e-50	50.91	Heat stress transcription factor B-4 OS=Arabidopsis thaliana OX=3702 GN=HSFB4 PE...	[more]
Q67U94	7.3e-47	47.84	Heat stress transcription factor B-4c OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q6Z9R8	4.0e-45	49.33	Putative heat stress transcription factor B-4a OS=Oryza sativa subsp. japonica O...	[more]

BLAST of Carg25979 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EC03	1.8e-128	98.72	heat stress transcription factor B-4b-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1I9E7	1.3e-123	95.76	heat stress transcription factor B-4b-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1DH11	4.1e-85	68.92	heat stress transcription factor B-4b-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1H9F1	5.9e-84	71.55	heat stress transcription factor B-4b-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JGJ8	2.1e-81	68.83	heat stress transcription factor B-4b-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Carg25979 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G46264.1	1.7e-51	50.91	heat shock transcription factor B4	[more]
AT5G62020.1	1.5e-39	39.31	heat shock transcription factor B2A	[more]
AT4G17750.1	1.3e-35	42.93	heat shock factor 1	[more]
AT4G36990.1	3.9e-35	38.27	heat shock factor 4	[more]
AT3G22830.1	8.6e-35	58.97	heat shock transcription factor A6B	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PRINTS	PR00056	HSFDOMAIN	coord: 53..65 score: 76.04 coord: 66..78 score: 81.54 coord: 15..38 score: 45.95
IPR000232	Heat shock factor (HSF)-type, DNA-binding	SMART	SM00415	hsfneu3	coord: 11..104 e-value: 9.8E-54 score: 194.5
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PFAM	PF00447	HSF_DNA-bind	coord: 15..104 e-value: 4.7E-32 score: 110.5
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PROSITE	PS00434	HSF_DOMAIN	coord: 54..78
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 7..105 e-value: 6.1E-37 score: 128.3
None	No IPR available	PANTHER	PTHR10015:SF304	HEAT STRESS TRANSCRIPTION FACTOR B-4B	coord: 6..225
IPR027725	Heat shock transcription factor family	PANTHER	PTHR10015	HEAT SHOCK TRANSCRIPTION FACTOR	coord: 6..225
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 11..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25979-RA	Carg25979-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding