Carg25952 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25952
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr20: 3971393 .. 3975855 (+)
RNA-Seq Expression	Carg25952
Synteny	Carg25952

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTAGCCTAGTATTTGCTATTAGAGAGGGTTCGCGGGTGAATCCTTCCCTTCCCACCTGTAATTGTATCGTGTTCGTGTTCCTAGCCAGAGAGAGTTGTCAAGAACTTGGAGATGGATGAATCAGACGGAGGTCAAAATCCAGCGCCTAACCTTACCTCTAATGGCGCCAAAGATTCGAAGGGCAAGTCATGTAAGGGCTGTCTCTATTACTCTTCACTTCAGAAATCCAAATCTAAAACGCCCACCTGCATTGGATTCTCCAAAACTCTCGAGCAAGGTACCTCTCTCGCATTCTTTTGTTCAGATTCCATTTGATTAGCGATTAACATGAATTGATGATATCGGTAATTAGCTCAGAAGCTTTTAGATTCGTCAATTTGTTGTATTCAATTTCATTTTTGATCTTCTGGGTGTTTAACATTTTTTGATTGCCATTTTGGGTTCTGCAATGGCTGCCTCTTGAAATTCAATGGTTACCGACTCACCGGTGTTTGGTCTTTTCCGTATGATTATGGCGGTTGTGCATAGTGTTTGAAGGCTGTCTTAACTTTATTTGATATGATATTCCTGTAGAATAAGCGAGTGTATAGATTCTATCGAACAAGTGAAGGGCATCTCTTTGTTGTATCCTTACTGGCCATGGAGACCAAAGGAACATCTTAAATGGAAGCCAATTGATTTCATGAATGGATGACCCCTTCATAATTGTAATAAGGAGATTGTTGGTGTTCATGGGGAGCTTAAACACCATGTCCCAAAAGGTCTTGAGCGAGGTGGCTCAATGAAAAGAGGCCTTGTGGGTTAAGCCGCCATAACCACATATCTTGATGTAGACGCGTGAAAGAAAAGACAAACAGACAGTAGAGATAATTTTGGGAACATTATTCTTAGGAGTAGGGACCTTACGGGATCGAAATGAAAACTGGACTACCCTTGCAGAGGAATGGCTAAGCATGGTTAGTACTATAAGTACAAGAAAAGACAAGACTATTAGCTGAATGAAGAATATAGAATGAGCTACATTAGTTACACTTAGAGTTTAGAAGTATGAGAGAAAGTAGGAGTAATCACAAAAGACGATTTCTCGTAAGTAATCGGTAGAATGAGCTACATTAATTTCACTTAGAAGTTGGAAGCATGAGAGAAATTAGGAGTACTCAAGAAGACGATTTCTCGGTAAGTGTTTGTGGTGTCTATAGCATATCTGGGTAAGGATAATTTTGTGTTTACAGTTGATGGTAGGAATGGAATATTGGTGTCCGAGCTATGGTATGGTCTAGGGTTGTGCTGGTTAGAAAGAAACTAAGGCTGTTTGAAGATAAATCCTCTACTTTTGAGTCCTTTTGTAGCTGTCTGCCTCTTGTGGTGTCACAACAATAGCAAATTCTCTTGCAATTCTCTTTTATTAGTATTATTGTTGTTATTATCTTACAAACTAGAGCAAGAAAGAGCAGAATCTCTGTAGATCACGGCAAATTTCTTTTGTGCTTATCGAGCGTAGTTGATCACTAACAATTAGAAAAGCTCATGTGAAATTAGCTTCCCTGGGAGGGGGGATGCCACTTCCCCTACATTTAGGTTGTGAGATCCCACATCAATTGGAGAGAAAAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAACAAATGCGTTTTAAAACCTTGAGGGGAAGTCCGAAAGGGAAAACCTAAAGAGAATCATATCTACTGACGGTGGGCTTGGGCTGTTACAAAGATGTCAAAGTCAGGCATCGAGCGGTGTGCCAGCGGGGACGTGGGCCTCCAAGGGCGGTGGATTGTGAGATCTCACATCAGTTGGAGAGGGGAACAAAGCATTTCTTATAAAAGTATGGAAACCTCTCCCTAACATACGCCTTTTAAAACCTAAAGGGGAAGTCCAAAAGAGAAAGCCGATAGAGGACAATATTTGCTAGCGGTGGGCTTGGGCTATTTACAAATGGTATCAGAGCTAGGTACTAGGCGGTGTGTCAATGGGGACGCTGGGCTCCCAAGGGCGGTGGATTGTGAGATCCCACATCGGTTGGAGCGGGAAACGGAGCATTCCTTGTAAGAGTGTGGAAACCTCTCCCTAATAGACGCGTTTTAAAAAATGGTTTTAAGACTTCTTACAATTGAAACTTCACTTTGTTCACATTGTAGTGCAATTACTTGTGTCCCTTGCCTCATTCACCTTGATCATTTTTTCAAATATTCGTGGATTGAAGTTTGGTTTCCTTCAATATTTAGTAGTTCTTAATTACAAATAACATTAACATTTCATGATATATATAGTAACATTGATTCTTCTAAGCAGTACCCAACTACATAGTGGGAGAAACTGAGTTGGAAGCTTCAAAAGAGGGACGCAGTCTTGCAGACTTCAAGTATGCTTGCGTTGGTTACTCTGTCCACTTAGAAAAGAAAGATTCACCAAATGATGTGCAGAACAAACAGGCTGAGCTGCCCTTCTGCGTTGGTTTAGAGGTTTTTAATATCTCAACTTTTCTTTGAGATGCAAAAAAATATTAAAATAACATCATTTCCTTTCATGCTAAATTAATAAAAAAATATCTTTAAACTTTAAAAAAAAAAAAGTTTTAAAATACCCTCGAAACTATTAGTACTTTGTTTCAGAATACTACTAGCTTTCAAAAGTAGCATTAATACTCTTAATTTTTAAAAAGTTATTACTCTTAGTAGTATATGGTCAAAACCGTTTATCTACATCCCATAGACTACCTCCCTCTTCAATTTCCTCGCTCTCCAATGATTCAAAGGTATTTGTAAAACACTTCTGATAGTTTTAGTGTATAAATGCTCTAGTGTTAGTAGGTAAACATTAAAATGCTGTTTTAAGCTGAGTTCTTAATCTTATGAATGTGATCTTGACAATAAACATATGCTTGTTAGGTATTGTTGGACAAAAGGCCAGCGGAACATTCCCAAGCTCATGTTCATGATAAAACTGAAGGTACTACAAGTTACCATATCATTCTTTTCGAGTACTAATATCTCTCAGTTTTTAGATAGATATCGGGTGAGGGGGTTCGAGATGTGGCTAGGTTTAATGCTTACTTGCAGGTGTTAGTCACTAGACGTGACCTTTCTGTATTTCTCTGAGTTTGCTCTTATTCATTTGAATCGAAGTCCTTATCGTTGTTAGAGTCAGAATCCTTTCATTGGGGCTTGTTTTTTCGTATAGAATTCTTTCATTGGGGCTTGTTTTTTCGTATGTGCTTGTATATTCTTTCAATTCTCTTTGCTGGAATTCGCATGAATCCTCGTTTAGATCTTCCTATAGTTTTTAGAGAGATATCGGGTGAAGGGGTTTGAGAGGTGGCTAGGGTTAACACCTACTTGCGGGCATTAGTCACTAGACGTGTGAGATCTCACATGGAATGAAGCATCCTTATAATGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCTAGCAGACTGTGTTTTAAAAACCTCGAACGGAAAGCCCGAAAGGAAAATTCCCAAAAAGGATAATATCTGTTAGCGGTGGACTTGGGTTGTTACAAGACGTGACCTTTTTGTAATTATGAGTTTGCTCTTACTCGTTTGAATCGAAATCCTTATCGTGGTTAGAGTAGACTCCTTTCATTGGGGCTTGTTTTTTCGTATGCTCTGGTATATTCTTTCAATTCCCTTTGCTGGAATTTAGCATGAATCCTCGTCTAGATCTTCGTATATTCTTTCATTATATAAAATCCGATTCCGAGATCGACAAACCCCTCAATCCCATGATAGAGAGATACTAATCTTCAAGTTTGGTCTTGATATTCAACAGATAGCCCTGCCTTTCCACAGCCACGCAACTACAAACCATCCTATGCAGCTGGAGACGAGTACCTAAACAGGCAAGAACATTTTGACACACTTATCTAGTTATCTCTTCACTGCTAAGCATGAATGTCACACAATCTTAATACCCAAAGAGTGCAACGTGCAGGTTTACACGAAACGCAGTCCTCGTCGCATCAGGCGTAGCGAGGAACGTGAACAAAATTTGCATCTACATAAAAGAAAGCTTCGACGATATTTTACACCCTTACCGAAGACGACCAAAATGATGTACGTCCATGAACTGCTAGAATAAAGATCAGTCATCACAGTAAATAGGTATGTTGCAGAACGCCGAAAATGCCCAATCATACATAACATTGATCAAATTCACATCCTTATAACTGTGTAAAGATGACGTCAAGGGAGCACGTCGTCTTTACGTGGCTGTAATAAATAATGTAACGAATTTAAATTCTCATGATTGTTCAAGCCATTGATTTAAACCTCGAGATAGAAAATTTTGAATTACATGTTCGGTCCCCGAACTTGTTAGAAATTGAAAGAAAGATATCTACTACGTGTGTGGTTGTGATCGAGCATATGAAATGCCAAGATACTTTAAATTTTCAAATTTGCTTTTTAA

mRNA sequence

TTTGTAGCCTAGTATTTGCTATTAGAGAGGGTTCGCGGGTGAATCCTTCCCTTCCCACCTGTAATTGTATCGTGTTCGTGTTCCTAGCCAGAGAGAGTTGTCAAGAACTTGGAGATGGATGAATCAGACGGAGGTCAAAATCCAGCGCCTAACCTTACCTCTAATGGCGCCAAAGATTCGAAGGGCAAGTCATGTAAGGGCTGTCTCTATTACTCTTCACTTCAGAAATCCAAATCTAAAACGCCCACCTGCATTGGATTCTCCAAAACTCTCGAGCAAGTACCCAACTACATAGTGGGAGAAACTGAGTTGGAAGCTTCAAAAGAGGGACGCAGTCTTGCAGACTTCAAGTATGCTTGCGTTGGTTACTCTGTCCACTTAGAAAAGAAAGATTCACCAAATGATGTGCAGAACAAACAGGCTGAGCTGCCCTTCTGCGTTGGTTTAGAGGTATTGTTGGACAAAAGGCCAGCGGAACATTCCCAAGCTCATGTTCATGATAAAACTGAAGATAGCCCTGCCTTTCCACAGCCACGCAACTACAAACCATCCTATGCAGCTGGAGACGAGTTTACACGAAACGCAGTCCTCGTCGCATCAGGCGTAGCGAGGAACGTGAACAAAATTTGCATCTACATAAAAGAAAGCTTCGACGATATTTTACACCCTTACCGAAGACGACCAAAATGATGTACGTCCATGAACTGCTAGAATAAAGATCAGTCATCACAGTAAATAGGTATGTTGCAGAACGCCGAAAATGCCCAATCATACATAACATTGATCAAATTCACATCCTTATAACTGTGTAAAGATGACGTCAAGGGAGCACGTCGTCTTTACGTGGCTGTAATAAATAATGTAACGAATTTAAATTCTCATGATTGTTCAAGCCATTGATTTAAACCTCGAGATAGAAAATTTTGAATTACATGTTCGGTCCCCGAACTTGTTAGAAATTGAAAGAAAGATATCTACTACGTGTGTGGTTGTGATCGAGCATATGAAATGCCAAGATACTTTAAATTTTCAAATTTGCTTTTTAA

Coding sequence (CDS)

ATGGATGAATCAGACGGAGGTCAAAATCCAGCGCCTAACCTTACCTCTAATGGCGCCAAAGATTCGAAGGGCAAGTCATGTAAGGGCTGTCTCTATTACTCTTCACTTCAGAAATCCAAATCTAAAACGCCCACCTGCATTGGATTCTCCAAAACTCTCGAGCAAGTACCCAACTACATAGTGGGAGAAACTGAGTTGGAAGCTTCAAAAGAGGGACGCAGTCTTGCAGACTTCAAGTATGCTTGCGTTGGTTACTCTGTCCACTTAGAAAAGAAAGATTCACCAAATGATGTGCAGAACAAACAGGCTGAGCTGCCCTTCTGCGTTGGTTTAGAGGTATTGTTGGACAAAAGGCCAGCGGAACATTCCCAAGCTCATGTTCATGATAAAACTGAAGATAGCCCTGCCTTTCCACAGCCACGCAACTACAAACCATCCTATGCAGCTGGAGACGAGTTTACACGAAACGCAGTCCTCGTCGCATCAGGCGTAGCGAGGAACGTGAACAAAATTTGCATCTACATAAAAGAAAGCTTCGACGATATTTTACACCCTTACCGAAGACGACCAAAATGA

Protein sequence

MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEFTRNAVLVASGVARNVNKICIYIKESFDDILHPYRRRPK

Homology

[Close]

BLAST of Carg25952 vs. NCBI nr
Match: KAG7010891.1 (hypothetical protein SDJN02_27689 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 393.3 bits (1009), Expect = 1.2e-105
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI
Sbjct: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEFTRNAVLVASGVARNVNKICIYIKESFD 180
           EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEFTRNAVLVASGVARNVNKICIYIKESFD
Sbjct: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEFTRNAVLVASGVARNVNKICIYIKESFD 180

Query: 181 DILHPYRRRPK 192
           DILHPYRRRPK
Sbjct: 181 DILHPYRRRPK 191

[Close]

BLAST of Carg25952 vs. NCBI nr
Match: XP_022943424.1 (uncharacterized protein LOC111448192 [Cucurbita moschata] >KAG6571077.1 hypothetical protein SDJN03_29992, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 385.2 bits (988), Expect = 3.3e-103
Identity = 189/195 (96.92%), Postives = 190/195 (97.44%), Query Frame = 0


Query: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDESDGGQNP PNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI
Sbjct: 1   MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNVNKICIYIK 180
           EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE    FTRNAVLVASGVARNVNK+CIYIK
Sbjct: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK 180

Query: 181 ESFDDILHPYRRRPK 192
           ESFDDILHPYRRRPK
Sbjct: 181 ESFDDILHPYRRRPK 195

[Close]

BLAST of Carg25952 vs. NCBI nr
Match: XP_023512006.1 (uncharacterized protein LOC111776848 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.8 bits (987), Expect = 4.3e-103
Identity = 189/195 (96.92%), Postives = 190/195 (97.44%), Query Frame = 0


Query: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTLEQVPNYI
Sbjct: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNVNKICIYIK 180
           EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE    FTRNAVLVASGVARNVNK+CIYIK
Sbjct: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK 180

Query: 181 ESFDDILHPYRRRPK 192
           ESFDDILHPYRRRPK
Sbjct: 181 ESFDDILHPYRRRPK 195

[Close]

BLAST of Carg25952 vs. NCBI nr
Match: XP_022986613.1 (uncharacterized protein LOC111484301 [Cucurbita maxima])

HSP 1 Score: 383.6 bits (984), Expect = 9.6e-103
Identity = 188/195 (96.41%), Postives = 190/195 (97.44%), Query Frame = 0


Query: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTLEQVPNYI
Sbjct: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNVNKICIYIK 180
           EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE    FTRNAVLVASGVARN+NK+CIYIK
Sbjct: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNMNKVCIYIK 180

Query: 181 ESFDDILHPYRRRPK 192
           ESFDDILHPYRRRPK
Sbjct: 181 ESFDDILHPYRRRPK 195

[Close]

BLAST of Carg25952 vs. NCBI nr
Match: XP_038900455.1 (uncharacterized protein LOC120087673 isoform X2 [Benincasa hispida])

HSP 1 Score: 355.5 bits (911), Expect = 2.8e-94
Identity = 176/195 (90.26%), Postives = 182/195 (93.33%), Query Frame = 0


Query: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDESDG QN APNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTL+QVPNYI
Sbjct: 1   MDESDGVQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSLADFKYACVGYSV+LEKKDS NDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNVNKICIYIK 180
           EHSQAHVH+KTEDSPAFPQPR YKPSY AGDE    F RNA LVASGVARNVN+IC Y+K
Sbjct: 121 EHSQAHVHNKTEDSPAFPQPRTYKPSYPAGDEYLNRFKRNAALVASGVARNVNRICNYVK 180

Query: 181 ESFDDILHPYRRRPK 192
           ESFDDIL+PYRRRPK
Sbjct: 181 ESFDDILYPYRRRPK 195

[Close]

BLAST of Carg25952 vs. ExPASy TrEMBL
Match: A0A6J1FU95 (uncharacterized protein LOC111448192 OS=Cucurbita moschata OX=3662 GN=LOC111448192 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.6e-103
Identity = 189/195 (96.92%), Postives = 190/195 (97.44%), Query Frame = 0


Query: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDESDGGQNP PNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI
Sbjct: 1   MDESDGGQNPPPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNVNKICIYIK 180
           EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE    FTRNAVLVASGVARNVNK+CIYIK
Sbjct: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNVNKVCIYIK 180

Query: 181 ESFDDILHPYRRRPK 192
           ESFDDILHPYRRRPK
Sbjct: 181 ESFDDILHPYRRRPK 195

[Close]

BLAST of Carg25952 vs. ExPASy TrEMBL
Match: A0A6J1JH16 (uncharacterized protein LOC111484301 OS=Cucurbita maxima OX=3661 GN=LOC111484301 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 4.7e-103
Identity = 188/195 (96.41%), Postives = 190/195 (97.44%), Query Frame = 0


Query: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTLEQVPNYI
Sbjct: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNVNKICIYIK 180
           EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE    FTRNAVLVASGVARN+NK+CIYIK
Sbjct: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNMNKVCIYIK 180

Query: 181 ESFDDILHPYRRRPK 192
           ESFDDILHPYRRRPK
Sbjct: 181 ESFDDILHPYRRRPK 195

[Close]

BLAST of Carg25952 vs. ExPASy TrEMBL
Match: A0A0A0LIW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G251500 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.8e-92
Identity = 170/195 (87.18%), Postives = 180/195 (92.31%), Query Frame = 0


Query: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDESDG QN APNLTSNG KDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTL+QVPNYI
Sbjct: 1   MDESDGVQNQAPNLTSNGVKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPNYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSL DFKYACVGYSV+LEKKDS NDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNVNKICIYIK 180
           E+SQAH+H+KTEDSPAFPQPR+YKPSY AGDE    F RNA LVASGVARNVN++C Y+K
Sbjct: 121 ENSQAHIHNKTEDSPAFPQPRSYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYVK 180

Query: 181 ESFDDILHPYRRRPK 192
           ES DDIL+PYRRRPK
Sbjct: 181 ESLDDILYPYRRRPK 195

[Close]

BLAST of Carg25952 vs. ExPASy TrEMBL
Match: A0A1S3CEZ6 (uncharacterized protein LOC103499721 OS=Cucumis melo OX=3656 GN=LOC103499721 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.7e-90
Identity = 168/195 (86.15%), Postives = 177/195 (90.77%), Query Frame = 0


Query: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYI 60
           MDES G QN APN TSNG KDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTL+QVP YI
Sbjct: 1   MDESGGVQNQAPNRTSNGIKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPKYI 60

Query: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120
           VGETELEASKEGRSL DFKYACVGYSV+LEKKDS NDVQNKQAELPFCVGLEVLLDKRPA
Sbjct: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNVNKICIYIK 180
           E+SQAH+H+KTEDSPAFPQPRNYKPSY AGDE    F RNA LVASGVARNVN++C Y+K
Sbjct: 121 ENSQAHIHNKTEDSPAFPQPRNYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYVK 180

Query: 181 ESFDDILHPYRRRPK 192
           ES DDIL+PYRRRPK
Sbjct: 181 ESLDDILYPYRRRPK 195

[Close]

BLAST of Carg25952 vs. ExPASy TrEMBL
Match: A0A6J1CWC7 (uncharacterized protein LOC111015399 OS=Momordica charantia OX=3673 GN=LOC111015399 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.5e-89
Identity = 169/200 (84.50%), Postives = 180/200 (90.00%), Query Frame = 0


Query: 1   MDESDGGQNPAPNLTSN---GAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVP 60
           MDES+G QN  PNL+SN   GAKDSKGKSCKGCLYYSSLQKSKSKTPTCIG SKTLEQVP
Sbjct: 1   MDESEGLQNQTPNLSSNGDGGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVP 60

Query: 61  NYIVGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDK 120
           NY+VGETELEASKEGR+L DFKYACVGYSV+LEKKDS +DV NKQAELPFCVGLEVLLDK
Sbjct: 61  NYVVGETELEASKEGRNLTDFKYACVGYSVYLEKKDSSDDVPNKQAELPFCVGLEVLLDK 120

Query: 121 RPAEHSQA--HVHDKTEDSPAFPQPRNYKPSYAAGDE----FTRNAVLVASGVARNVNKI 180
           RPAEHS A  H+HDKTEDSPAFPQPRNYKPSY+AGDE    F RNA LVASGVARNVN++
Sbjct: 121 RPAEHSHAHTHIHDKTEDSPAFPQPRNYKPSYSAGDEYLNRFKRNATLVASGVARNVNRV 180

Query: 181 CIYIKESFDDILHPYRRRPK 192
           C YIKESFDDIL+PYRRRPK
Sbjct: 181 CNYIKESFDDILYPYRRRPK 200

[Close]

BLAST of Carg25952 vs. TAIR 10
Match: AT3G51100.1 (unknown protein; Has 48 Blast hits to 48 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 175.6 bits (444), Expect = 3.7e-44
Identity = 91/184 (49.46%), Postives = 120/184 (65.22%), Query Frame = 0


Query: 23  KGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYAC 82
           KG+SCKG LYYSS  KSKSK P C+G  +TL QVP+Y+VG++E EASKEGR+LADF Y C
Sbjct: 28  KGRSCKGYLYYSSTLKSKSKNPRCVGIPRTLRQVPDYVVGQSEAEASKEGRTLADFYYGC 87

Query: 83  VGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEHSQAHV-----HDKTEDSPAF 142
           +GYSV++  KDS    Q+ + +LP CVGLE+L D+R A  + + V     + K       
Sbjct: 88  LGYSVYMTDKDSSAIKQHTKTQLPVCVGLEILADRRAASGNTSSVPARVQNRKDSREVPV 147

Query: 143 PQPRNYKPSYAAG----------DEFTRNAVLVASGVARNVNKICIYIKESFDDILHPYR 192
           PQ +N KP+ A              FTRNA LVA+GV +N+ ++  Y+KE+ DD L PYR
Sbjct: 148 PQHQNNKPASATATATNTENGFLTRFTRNANLVAAGVMKNMKRVGNYVKETVDDSLDPYR 207

[Close]

BLAST of Carg25952 vs. TAIR 10
Match: AT3G51100.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 151.8 bits (382), Expect = 5.7e-37
Identity = 85/184 (46.20%), Postives = 110/184 (59.78%), Query Frame = 0


Query: 23  KGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYAC 82
           KG+SCKG LYYSS  KSKSK P C+G  +TL Q           EASKEGR+LADF Y C
Sbjct: 28  KGRSCKGYLYYSSTLKSKSKNPRCVGIPRTLRQA----------EASKEGRTLADFYYGC 87

Query: 83  VGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEHSQAHV-----HDKTEDSPAF 142
           +GYSV++  KDS    Q+ + +LP CVGLE+L D+R A  + + V     + K       
Sbjct: 88  LGYSVYMTDKDSSAIKQHTKTQLPVCVGLEILADRRAASGNTSSVPARVQNRKDSREVPV 147

Query: 143 PQPRNYKPSYAAG----------DEFTRNAVLVASGVARNVNKICIYIKESFDDILHPYR 192
           PQ +N KP+ A              FTRNA LVA+GV +N+ ++  Y+KE+ DD L PYR
Sbjct: 148 PQHQNNKPASATATATNTENGFLTRFTRNANLVAAGVMKNMKRVGNYVKETVDDSLDPYR 201

[Close]

BLAST of Carg25952 vs. TAIR 10
Match: AT3G51100.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 134.8 bits (338), Expect = 7.3e-32
Identity = 68/131 (51.91%), Postives = 89/131 (67.94%), Query Frame = 0


Query: 23  KGKSCKGCLYYSSLQKSKSKTPTCIGFSKTLEQVPNYIVGETELEASKEGRSLADFKYAC 82
           KG+SCKG LYYSS  KSKSK P C+G  +TL QVP+Y+VG++E EASKEGR+LADF Y C
Sbjct: 28  KGRSCKGYLYYSSTLKSKSKNPRCVGIPRTLRQVPDYVVGQSEAEASKEGRTLADFYYGC 87

Query: 83  VGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPAEHSQAHV-----HDKTEDSPAF 142
           +GYSV++  KDS    Q+ + +LP CVGLE+L D+R A  + + V     + K       
Sbjct: 88  LGYSVYMTDKDSSAIKQHTKTQLPVCVGLEILADRRAASGNTSSVPARVQNRKDSREVPV 147

Query: 143 PQPRNYKPSYA 149
           PQ +N KP+ A
Sbjct: 148 PQHQNNKPASA 158

The following BLAST results are available for this feature:

BLAST of Carg25952 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010891.1	1.2e-105	100.00	hypothetical protein SDJN02_27689 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022943424.1	3.3e-103	96.92	uncharacterized protein LOC111448192 [Cucurbita moschata] >KAG6571077.1 hypothet...	[more]
XP_023512006.1	4.3e-103	96.92	uncharacterized protein LOC111776848 [Cucurbita pepo subsp. pepo]	[more]
XP_022986613.1	9.6e-103	96.41	uncharacterized protein LOC111484301 [Cucurbita maxima]	[more]
XP_038900455.1	2.8e-94	90.26	uncharacterized protein LOC120087673 isoform X2 [Benincasa hispida]	[more]

BLAST of Carg25952 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg25952 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FU95	1.6e-103	96.92	uncharacterized protein LOC111448192 OS=Cucurbita moschata OX=3662 GN=LOC1114481...	[more]
A0A6J1JH16	4.7e-103	96.41	uncharacterized protein LOC111484301 OS=Cucurbita maxima OX=3661 GN=LOC111484301...	[more]
A0A0A0LIW6	4.8e-92	87.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G251500 PE=4 SV=1	[more]
A0A1S3CEZ6	2.7e-90	86.15	uncharacterized protein LOC103499721 OS=Cucumis melo OX=3656 GN=LOC103499721 PE=...	[more]
A0A6J1CWC7	6.5e-89	84.50	uncharacterized protein LOC111015399 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]

BLAST of Carg25952 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51100.1	3.7e-44	49.46	unknown protein; Has 48 Blast hits to 48 proteins in 16 species: Archae - 0; Bac...	[more]
AT3G51100.3	5.7e-37	46.20	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G51100.2	7.3e-32	51.91	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR34566:SF2	ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN	coord: 8..191
None	No IPR available	PANTHER	PTHR34566	ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN	coord: 8..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25952-RA	Carg25952-RA	mRNA