Carg25910 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25910
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	STRUBBELIG-receptor family 8
Location	Carg_Chr04: 11252302 .. 11253329 (+)
RNA-Seq Expression	Carg25910
Synteny	Carg25910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGGTTCATTTGGCTATAGTGCTCCGGAATTTGCCTTGTCGGGTTTGTACACGGTCAAAAGTGACGTTTATAGCTTTGGGGTCGTGATGTTGGAGCTCTTGAGTGGCCGAAAGCCGCTTGACAGGTGAATTTTCCTTCGATACACGTGATTCATACCTATTTCTTGCTGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCTATGTAATGTTTCACATTCCCTTCATATTGATCAGTTCGAGGGCGAGATCGGAGCAATCACTTGTGAGATGGGCTACTCCCCAACTTCACGATATCGACGCCTTGGCAAAAATGGTAGACCCTACTTTGAACGGAATGTACCCTGCGAAATCTCTATCGCGCTTCGCCGACATTATTGCTCTTTGTGTCCAGGTATACTTCATTTAAACTTTCATAAAACGTCACCTTCATCTTAAAACACAGACATAGCCTTACGTGTTTTGAAAACACCTTTGAAAACGACACAACAAAAGACATCTTATTCTAGCCTAAGTCTAAGAAAATAAACACGACTACCTTATGCATGCATGTGCCATGGTCTCACTTCTAGAGGATCAACAACCGGTTATTCGAAAGTATTAGTTCATATCATAATCTTTGAGCCTTTTGCAGCCCGAGCCTGAATTCCGACCTCCAATGTCTGAAGTAGTACAAGCACTGGTACGGTTAGTGCAAAGAGCCAGTGTGGTAAAAAGGCATTCGAGTGACGAGTCGGGTTTCACGTACAAAACACCCGAGCACGATGTAGTTGATTTGCCATTTTGAGGGACGACACAGAGCTCTGAAACGAAGCCCGAACTTGTTTCCATTGTAATTAAAATATTCGAGTGTATAGCAGCAGGGAAGTGATTTCTACATTAAGTTTCTGTCTTTCCTTCAATATTTTGATTATCATTGTTCTTATTTATTCAATCTAAATTTGGTTTTTGTTTACCTTATTCATAAAATGTCATAAATATTGGAA

mRNA sequence

ATGGTTGGTTCATTTGGCTATAGTGCTCCGGAATTTGCCTTGTCGGGTTTGTACACGGTCAAAAGTGACGTTTATAGCTTTGGGGTCGTGATGTTGGAGCTCTTGAGTGGCCGAAAGCCGCTTGACAGTTCGAGGGCGAGATCGGAGCAATCACTTGTGAGATGGGCTACTCCCCAACTTCACGATATCGACGCCTTGGCAAAAATGGTAGACCCTACTTTGAACGGAATGTACCCTGCGAAATCTCTATCGCGCTTCGCCGACATTATTGCTCTTTGTGTCCAGCCCGAGCCTGAATTCCGACCTCCAATGTCTGAAGTAGTACAAGCACTGGTACGGTTAGTGCAAAGAGCCAGTGTGGTAAAAAGGCATTCGAGTGACGAGTCGGGTTTCACGTACAAAACACCCGAGCACGATGTAGTTGATTTGCCATTTTGAGGGACGACACAGAGCTCTGAAACGAAGCCCGAACTTGTTTCCATTGTAATTAAAATATTCGAGTGTATAGCAGCAGGGAAGTGATTTCTACATTAAGTTTCTGTCTTTCCTTCAATATTTTGATTATCATTGTTCTTATTTATTCAATCTAAATTTGGTTTTTGTTTACCTTATTCATAAAATGTCATAAATATTGGAA

Coding sequence (CDS)

ATGGTTGGTTCATTTGGCTATAGTGCTCCGGAATTTGCCTTGTCGGGTTTGTACACGGTCAAAAGTGACGTTTATAGCTTTGGGGTCGTGATGTTGGAGCTCTTGAGTGGCCGAAAGCCGCTTGACAGTTCGAGGGCGAGATCGGAGCAATCACTTGTGAGATGGGCTACTCCCCAACTTCACGATATCGACGCCTTGGCAAAAATGGTAGACCCTACTTTGAACGGAATGTACCCTGCGAAATCTCTATCGCGCTTCGCCGACATTATTGCTCTTTGTGTCCAGCCCGAGCCTGAATTCCGACCTCCAATGTCTGAAGTAGTACAAGCACTGGTACGGTTAGTGCAAAGAGCCAGTGTGGTAAAAAGGCATTCGAGTGACGAGTCGGGTTTCACGTACAAAACACCCGAGCACGATGTAGTTGATTTGCCATTTTGA

Protein sequence

MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRHSSDESGFTYKTPEHDVVDLPF

Homology

[Close]

BLAST of Carg25910 vs. NCBI nr
Match: KAG7032422.1 (Protein STRUBBELIG-RECEPTOR FAMILY 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 60
           MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL
Sbjct: 1   MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 60

Query: 61  HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 120
           HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV
Sbjct: 61  HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 120

Query: 121 VKRHSSDESGFTYKTPEHDVVDLPF 146
           VKRHSSDESGFTYKTPEHDVVDLPF
Sbjct: 121 VKRHSSDESGFTYKTPEHDVVDLPF 145

[Close]

BLAST of Carg25910 vs. NCBI nr
Match: XP_022927186.1 (protein STRUBBELIG-RECEPTOR FAMILY 8-like [Cucurbita moschata])

HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 60
           MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL
Sbjct: 567 MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 626

Query: 61  HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 120
           HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV
Sbjct: 627 HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 686

Query: 121 VKRHSSDESGFTYKTPEHDVVDLPF 146
           VKRHSSDESGFTYKTPEHDVVDLPF
Sbjct: 687 VKRHSSDESGFTYKTPEHDVVDLPF 711

[Close]

BLAST of Carg25910 vs. NCBI nr
Match: KAG6583777.1 (Protein STRUBBELIG-RECEPTOR FAMILY 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 60
           MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL
Sbjct: 567 MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 626

Query: 61  HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 120
           HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV
Sbjct: 627 HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 686

Query: 121 VKRHSSDESGFTYKTPEHDVVDLPF 146
           VKRHSSDESGFTYKTPEHDVVDLPF
Sbjct: 687 VKRHSSDESGFTYKTPEHDVVDLPF 711

[Close]

BLAST of Carg25910 vs. NCBI nr
Match: XP_023519985.1 (protein STRUBBELIG-RECEPTOR FAMILY 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.7 bits (735), Expect = 5.5e-74
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 60
           MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL
Sbjct: 567 MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 626

Query: 61  HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 120
           HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV
Sbjct: 627 HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 686

Query: 121 VKRHSSDESGFTYKTPEHDVVDLPF 146
           VKRHSSDES FTYKTPEHDVVDLPF
Sbjct: 687 VKRHSSDESSFTYKTPEHDVVDLPF 711

[Close]

BLAST of Carg25910 vs. NCBI nr
Match: XP_023001548.1 (protein STRUBBELIG-RECEPTOR FAMILY 8-like [Cucurbita maxima])

HSP 1 Score: 287.0 bits (733), Expect = 9.3e-74
Identity = 143/145 (98.62%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 60
           MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSR+RSEQSLVRWATPQL
Sbjct: 567 MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRSRSEQSLVRWATPQL 626

Query: 61  HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 120
           HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV
Sbjct: 627 HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 686

Query: 121 VKRHSSDESGFTYKTPEHDVVDLPF 146
           VKRHSSDESGFTYKTPEH+VVDLPF
Sbjct: 687 VKRHSSDESGFTYKTPEHNVVDLPF 711

[Close]

BLAST of Carg25910 vs. ExPASy Swiss-Prot
Match: Q6R2J8 (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 5.5e-69
Identity = 126/145 (86.90%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 60
           +VGSFGYSAPEFALSG+YTVKSDVY+FGVVMLELL+GRKPLDSSR R+EQSLVRWATPQL
Sbjct: 559 VVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQL 618

Query: 61  HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 120
           HDIDAL+KMVDP+LNGMYPAKSLSRFADIIALC+QPEPEFRPPMSEVVQ LVRLVQRASV
Sbjct: 619 HDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRPPMSEVVQQLVRLVQRASV 678

Query: 121 VKRHSSDESGFTYKTPEHDVVDLPF 146
           VKR SSD++GF+Y+TPEH+ VD+ F
Sbjct: 679 VKRRSSDDTGFSYRTPEHEHVDISF 703

[Close]

BLAST of Carg25910 vs. ExPASy Swiss-Prot
Match: Q9C8M9 (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.3e-51
Identity = 98/118 (83.05%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 6   GYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQLHDIDA 65
           GYSAPE ++SG Y++KSD+YSFGVVMLELL+GRKP DS+R+RSEQSLVRWATPQLHDIDA
Sbjct: 582 GYSAPEVSMSGQYSLKSDIYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDA 641

Query: 66  LAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKR 124
           LAKMVDP L G+YP KSLSRFAD+IALCVQPEPEFRPPMSEVVQALV LVQRA++ KR
Sbjct: 642 LAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVVLVQRANMSKR 699

[Close]

BLAST of Carg25910 vs. ExPASy Swiss-Prot
Match: Q9LUL4 (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana OX=3702 GN=SRF7 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.0e-51
Identity = 100/125 (80.00%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 6   GYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQLHDIDA 65
           GYSAPE ++SG Y++KSDVYSFGVVMLELL+GRKP DS+R+RSEQSLVRWATPQLHDIDA
Sbjct: 585 GYSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDA 644

Query: 66  LAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRHS 125
           L KMVDP L G+YP KSLSRFAD+IALCVQPEPEFRPPMSEVVQALV LVQRA++ KR  
Sbjct: 645 LGKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVVLVQRANMSKRTV 704

Query: 126 SDESG 131
              SG
Sbjct: 705 GVGSG 709

[Close]

BLAST of Carg25910 vs. ExPASy Swiss-Prot
Match: Q6R2K1 (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 8.8e-43
Identity = 90/137 (65.69%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 6   GYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQLHDIDA 65
           GY+APE      YT KSDVYSFGVVMLELL+GR P D  + R E+SLVRWATPQLHDIDA
Sbjct: 567 GYNAPEARDPSAYTPKSDVYSFGVVMLELLTGRVPFDGEKPRPERSLVRWATPQLHDIDA 626

Query: 66  LAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRHS 125
           L+ + DP L+G+YP KSLSRFADIIALCVQ EPEFRPPMSEVV+ALVR+VQR+S+  +  
Sbjct: 627 LSNIADPALHGLYPPKSLSRFADIIALCVQVEPEFRPPMSEVVEALVRMVQRSSMKLK-- 686

Query: 126 SDESGFTYKTPEHDVVD 143
            D+   +Y+   HD  D
Sbjct: 687 -DDLSSSYRA--HDDYD 698

[Close]

BLAST of Carg25910 vs. ExPASy Swiss-Prot
Match: Q6R2K3 (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.3e-41
Identity = 86/129 (66.67%), Postives = 102/129 (79.07%), Query Frame = 0


Query: 1   MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 60
           ++ ++GY APEF  SG+YT +SDVYSFGVVMLELL+GR   D  R+R EQ LVRWA PQL
Sbjct: 650 LLAAYGYGAPEFD-SGIYTWQSDVYSFGVVMLELLTGRMSYDRDRSRGEQFLVRWAIPQL 709

Query: 61  HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 120
           HDIDAL KMVDP+LNG YPAKSLS FADII+ CVQ EPEFRP MSEVVQ L+ +++R   
Sbjct: 710 HDIDALGKMVDPSLNGQYPAKSLSHFADIISRCVQSEPEFRPLMSEVVQDLLDMIRR--- 769

Query: 121 VKRHSSDES 130
            +RH S +S
Sbjct: 770 -ERHGSGDS 773

[Close]

BLAST of Carg25910 vs. ExPASy TrEMBL
Match: A0A6J1EH00 (protein STRUBBELIG-RECEPTOR FAMILY 8-like OS=Cucurbita moschata OX=3662 GN=LOC111434109 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.3e-75
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 60
           MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL
Sbjct: 567 MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 626

Query: 61  HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 120
           HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV
Sbjct: 627 HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 686

Query: 121 VKRHSSDESGFTYKTPEHDVVDLPF 146
           VKRHSSDESGFTYKTPEHDVVDLPF
Sbjct: 687 VKRHSSDESGFTYKTPEHDVVDLPF 711

[Close]

BLAST of Carg25910 vs. ExPASy TrEMBL
Match: A0A6J1KQU9 (protein STRUBBELIG-RECEPTOR FAMILY 8-like OS=Cucurbita maxima OX=3661 GN=LOC111495652 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.5e-74
Identity = 143/145 (98.62%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 60
           MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSR+RSEQSLVRWATPQL
Sbjct: 567 MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRSRSEQSLVRWATPQL 626

Query: 61  HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 120
           HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV
Sbjct: 627 HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 686

Query: 121 VKRHSSDESGFTYKTPEHDVVDLPF 146
           VKRHSSDESGFTYKTPEH+VVDLPF
Sbjct: 687 VKRHSSDESGFTYKTPEHNVVDLPF 711

[Close]

BLAST of Carg25910 vs. ExPASy TrEMBL
Match: A0A5D3CME4 (Protein STRUBBELIG-RECEPTOR FAMILY 8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00700 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.5e-72
Identity = 139/145 (95.86%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 1   MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 60
           MVGSFGYSAPEFALSG+YTVKSDVYSFGVVMLELL+GRKPLDSSR RSEQSLVRWATPQL
Sbjct: 561 MVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQL 620

Query: 61  HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 120
           HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV
Sbjct: 621 HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 680

Query: 121 VKRHSSDESGFTYKTPEHDVVDLPF 146
           VKRHSSDESGF+YKTPEHD V+LPF
Sbjct: 681 VKRHSSDESGFSYKTPEHDAVELPF 705

[Close]

BLAST of Carg25910 vs. ExPASy TrEMBL
Match: A0A5A7TNK1 (Protein STRUBBELIG-RECEPTOR FAMILY 8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G00240 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.5e-72
Identity = 139/145 (95.86%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 1   MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 60
           MVGSFGYSAPEFALSG+YTVKSDVYSFGVVMLELL+GRKPLDSSR RSEQSLVRWATPQL
Sbjct: 532 MVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQL 591

Query: 61  HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 120
           HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV
Sbjct: 592 HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 651

Query: 121 VKRHSSDESGFTYKTPEHDVVDLPF 146
           VKRHSSDESGF+YKTPEHD V+LPF
Sbjct: 652 VKRHSSDESGFSYKTPEHDAVELPF 676

[Close]

BLAST of Carg25910 vs. ExPASy TrEMBL
Match: A0A0A0M151 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G701280 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.5e-72
Identity = 139/145 (95.86%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 1   MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 60
           MVGSFGYSAPEFALSG+YTVKSDVYSFGVVMLELL+GRKPLDSSR RSEQSLVRWATPQL
Sbjct: 567 MVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQL 626

Query: 61  HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 120
           HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV
Sbjct: 627 HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 686

Query: 121 VKRHSSDESGFTYKTPEHDVVDLPF 146
           VKRHSSDESGF+YKTPEHD V+LPF
Sbjct: 687 VKRHSSDESGFSYKTPEHDAVELPF 711

[Close]

BLAST of Carg25910 vs. TAIR 10
Match: AT4G22130.1 (STRUBBELIG-receptor family 8 )

HSP 1 Score: 261.5 bits (667), Expect = 3.9e-70
Identity = 126/145 (86.90%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 60
           +VGSFGYSAPEFALSG+YTVKSDVY+FGVVMLELL+GRKPLDSSR R+EQSLVRWATPQL
Sbjct: 559 VVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQL 618

Query: 61  HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 120
           HDIDAL+KMVDP+LNGMYPAKSLSRFADIIALC+QPEPEFRPPMSEVVQ LVRLVQRASV
Sbjct: 619 HDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRPPMSEVVQQLVRLVQRASV 678

Query: 121 VKRHSSDESGFTYKTPEHDVVDLPF 146
           VKR SSD++GF+Y+TPEH+ VD+ F
Sbjct: 679 VKRRSSDDTGFSYRTPEHEHVDISF 703

[Close]

BLAST of Carg25910 vs. TAIR 10
Match: AT4G22130.2 (STRUBBELIG-receptor family 8 )

HSP 1 Score: 261.5 bits (667), Expect = 3.9e-70
Identity = 126/145 (86.90%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQL 60
           +VGSFGYSAPEFALSG+YTVKSDVY+FGVVMLELL+GRKPLDSSR R+EQSLVRWATPQL
Sbjct: 418 VVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQL 477

Query: 61  HDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 120
           HDIDAL+KMVDP+LNGMYPAKSLSRFADIIALC+QPEPEFRPPMSEVVQ LVRLVQRASV
Sbjct: 478 HDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRPPMSEVVQQLVRLVQRASV 537

Query: 121 VKRHSSDESGFTYKTPEHDVVDLPF 146
           VKR SSD++GF+Y+TPEH+ VD+ F
Sbjct: 538 VKRRSSDDTGFSYRTPEHEHVDISF 562

[Close]

BLAST of Carg25910 vs. TAIR 10
Match: AT1G53730.1 (STRUBBELIG-receptor family 6 )

HSP 1 Score: 203.0 bits (515), Expect = 1.6e-52
Identity = 98/118 (83.05%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 6   GYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQLHDIDA 65
           GYSAPE ++SG Y++KSD+YSFGVVMLELL+GRKP DS+R+RSEQSLVRWATPQLHDIDA
Sbjct: 582 GYSAPEVSMSGQYSLKSDIYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDA 641

Query: 66  LAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKR 124
           LAKMVDP L G+YP KSLSRFAD+IALCVQPEPEFRPPMSEVVQALV LVQRA++ KR
Sbjct: 642 LAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVVLVQRANMSKR 699

[Close]

BLAST of Carg25910 vs. TAIR 10
Match: AT3G14350.2 (STRUBBELIG-receptor family 7 )

HSP 1 Score: 202.2 bits (513), Expect = 2.8e-52
Identity = 100/125 (80.00%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 6   GYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQLHDIDA 65
           GYSAPE ++SG Y++KSDVYSFGVVMLELL+GRKP DS+R+RSEQSLVRWATPQLHDIDA
Sbjct: 548 GYSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDA 607

Query: 66  LAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRHS 125
           L KMVDP L G+YP KSLSRFAD+IALCVQPEPEFRPPMSEVVQALV LVQRA++ KR  
Sbjct: 608 LGKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVVLVQRANMSKRTV 667

Query: 126 SDESG 131
              SG
Sbjct: 668 GVGSG 672

[Close]

BLAST of Carg25910 vs. TAIR 10
Match: AT3G14350.1 (STRUBBELIG-receptor family 7 )

HSP 1 Score: 202.2 bits (513), Expect = 2.8e-52
Identity = 100/125 (80.00%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 6   GYSAPEFALSGLYTVKSDVYSFGVVMLELLSGRKPLDSSRARSEQSLVRWATPQLHDIDA 65
           GYSAPE ++SG Y++KSDVYSFGVVMLELL+GRKP DS+R+RSEQSLVRWATPQLHDIDA
Sbjct: 585 GYSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDA 644

Query: 66  LAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRHS 125
           L KMVDP L G+YP KSLSRFAD+IALCVQPEPEFRPPMSEVVQALV LVQRA++ KR  
Sbjct: 645 LGKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVVLVQRANMSKRTV 704

Query: 126 SDESG 131
              SG
Sbjct: 705 GVGSG 709

The following BLAST results are available for this feature:

BLAST of Carg25910 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032422.1	1.1e-74	100.00	Protein STRUBBELIG-RECEPTOR FAMILY 8, partial [Cucurbita argyrosperma subsp. arg...	[more]
XP_022927186.1	1.1e-74	100.00	protein STRUBBELIG-RECEPTOR FAMILY 8-like [Cucurbita moschata]	[more]
KAG6583777.1	1.1e-74	100.00	Protein STRUBBELIG-RECEPTOR FAMILY 8, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_023519985.1	5.5e-74	99.31	protein STRUBBELIG-RECEPTOR FAMILY 8-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001548.1	9.3e-74	98.62	protein STRUBBELIG-RECEPTOR FAMILY 8-like [Cucurbita maxima]	[more]

BLAST of Carg25910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R2J8	5.5e-69	86.90	Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=...	[more]
Q9C8M9	2.3e-51	83.05	Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=...	[more]
Q9LUL4	4.0e-51	80.00	Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana OX=3702 GN=SRF7 PE=...	[more]
Q6R2K1	8.8e-43	65.69	Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=...	[more]
Q6R2K3	6.3e-41	66.67	Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=...	[more]

BLAST of Carg25910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EH00	5.3e-75	100.00	protein STRUBBELIG-RECEPTOR FAMILY 8-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KQU9	4.5e-74	98.62	protein STRUBBELIG-RECEPTOR FAMILY 8-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A5D3CME4	1.5e-72	95.86	Protein STRUBBELIG-RECEPTOR FAMILY 8 isoform X1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7TNK1	1.5e-72	95.86	Protein STRUBBELIG-RECEPTOR FAMILY 8 isoform X1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0M151	1.5e-72	95.86	Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G701...	[more]

BLAST of Carg25910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22130.1	3.9e-70	86.90	STRUBBELIG-receptor family 8	[more]
AT4G22130.2	3.9e-70	86.90	STRUBBELIG-receptor family 8	[more]
AT1G53730.1	1.6e-52	83.05	STRUBBELIG-receptor family 6	[more]
AT3G14350.2	2.8e-52	80.00	STRUBBELIG-receptor family 7	[more]
AT3G14350.1	2.8e-52	80.00	STRUBBELIG-receptor family 7	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	PFAM	PF07714	PK_Tyr_Ser-Thr	coord: 7..111 e-value: 1.5E-12 score: 47.3
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 1..139 e-value: 2.2E-30 score: 107.4
None	No IPR available	PANTHER	PTHR27001:SF277	PROTEIN STRUBBELIG-RECEPTOR FAMILY 8	coord: 2..140
None	No IPR available	PANTHER	PTHR27001	OS01G0253100 PROTEIN	coord: 2..140
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 1..114 score: 14.068291
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25910-RA	Carg25910-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity