![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Carg25900 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCATTTCTTTCCTCTGTTGTTGAGCTCTCTTTTAGGTGAATTTGGCGGGAGTTGATTGTGTTGTTGTGTAGTGAATCACAATGTTGGGAGAGTTTATGGTTCGATGCCTTCTGTGAGTTCTTTGTTTCTTCGATTCCAAGAGAGTTTCTCTGGTTTTTATTTTTCTTTCTGGCGGTGGATTTAGTGATTGATGAGTATTGATCAATGTAGGATGCTGTTTGGATATGCTTATCCTGCGTTTCAATGCTACAAAACGGTTGTGCAGAGTCGGATTGAAATCCGAGAGCTTCAATTCTGGTGTCAATTTTGGTAAGAACGAATCCGGTTTTGCTATTCGATTTAGTGGAGCGGTTGATGATTTGTGCCCTGATCTATAGCTGTTGACCTGATTATTTTATCGTCTCTCGTAATCAATAAGCATTTATTTCTCGAATTCCATTCTAGTCCTTTTGATTATAGCTAATTTACATGCGCAACCTTGATGAAGAGCGATCGACTTAGATTTTTGTGTTTGGGCACAACAGTGGAAAGGGTTTTGTTGACGCTCTTTATGGCTTTGCCTTTGTCTGCTTTGAACATTGAGTTTGAGTAGCTTTCACTCCACTTTGTTTCTGGTTACGTTACTTTTGAATTGAAAGCCTATTTATTCAATATTTGCAGGATCATTGTGGCCATTTTAACAGTTGTTGAGAGGATTGCTGACACTTTAGTCGCATGGTATGTGTAGCTTTCTTTATTTCTTTCCCTAAAGAATGTTAATACCTTGTTGCATTTCTCATCATTTCGCCTGTGCTTAAAATTTATGGTCCAAAACTTTGTCAAGGTTGCCCATGTACGGGGAATTGAAGCTGGCCCTCTTTATCTATTTGTGGTATCCAAAGACCAAGGTAAGAAAACTGAGAGATGTAATCATTGAAGCTAATTCTCTATATGTTATTTGATGATCTTGTAGGAAAAGGCAAGAAACATTATGTACACGATAATAAAGTTCTAATCATTACGTAACGTCTAACTTAGTTCATATAACCATCAATACGAATCAGAAACTACTTAAAACACCATGTGAATTATCAAGGTTTGGTGTCAATTTGAAGCTTCAGAATTAAATTGATTGCCGTTAAGTTTCTTGCCATCTAAATGTTGACGCAAATTAGGAACTATTTGGAACTAAAATGTTGATTTTGGAACTTCATTGAAGTAGAACTGTCTAAATCTACCAAAATTATAGGAATCTGAAGTCCTATTTCAAAATTTTCAAACAAGTAGCTCAAGAACAAGATGTAAGAGCACAGGACATATATTTCTAATTTGAATACAGCTGATCTGTTTGTTAATGTTGGGCTAAAACAATGCAGGGAACAAAATATGTGTTCGACACTTTACTGCGGCCCTTGATAGATAAACACGAAACAGATATTGAACAGAAGATGGGGGATTGGAGAGGCAAGGGCTGGGAATTGGCCCTATTCTACTGGAAAAACTGTACTGAGTTGAGCCAATCTGCAATCGTCCAAGTCATTAACTACATAGCTAGGCCTGCAGCTGCGGCCCCAGACGACAGGGTAACCTTCTGATCCTCTTCCTCGAAGCCCTTTTAGTTTTAGCAGTTAATGAGAGCAAGAAAGAACTTATTTTCCTGTGCTTTTAAGACATTTACAAAAACCTTATTAGGAATAGAACCCAGCCGGAGCATCGAAATCCATTTAATTAGAGATGAAAATTGACATTTTGCAGAGGAACGAACGTCACCAACGTCCAAGTGCGCCGCCAGCGCCACCACCACCTCCGCCGCGTCCAAATGATCTGCCCTCGTTCTTCCATAAGCCTCCAAGGAAGACCAAGGACTCGAGCAAGAGCAATGCCATGAAGTGGTTTCCAAGTGCCCCTCCTCTGCCCGGCTCCAGTAATCGGCGTTCCACAGCCACATCGGAGGACTTTGATGTGCAATTTCCCCTTCATGATCAAACAAACTATTTTTATGAAGATCAAAACCACAACCAAGCTCGATTCCGAGGATCCAAAAAAACCTACTAGAAGTTACCAAACAAAAAACTGTACATAAAAAAGAAGACGACAACACTGCAAACCCTCTCCCCGACCAAAGGAAGATAAAAGATTAGATTCATTTTGGAACTTTTCATCGAACATTTACATCCCAATTTTTCTTTTTCTTCTTCTTCTTAGACTGTACTCATAGGGGTGTATGTGCATATATTCATTAATACATAGAACAGAATAGAAACAGATGACGATTTATTTCAGTCAAAGGGGGGAGCTGATTTGTATTTCCCCTGACCACCATTAATAGACAAAACTGAACCCCACAAC TCCATTTCTTTCCTCTGTTGTTGAGCTCTCTTTTAGGTGAATTTGGCGGGAGTTGATTGTGTTGTTGTGTAGTGAATCACAATGTTGGGAGAGTTTATGGTTCGATGCCTTCTGTGAGTTCTTTGTTTCTTCGATTCCAAGAGAGTTTCTCTGGTTTTTATTTTTCTTTCTGGCGGTGGATTTAGTGATTGATGAGTATTGATCAATGTAGGATGCTGTTTGGATATGCTTATCCTGCGTTTCAATGCTACAAAACGGTTGTGCAGAGTCGGATTGAAATCCGAGAGCTTCAATTCTGGTGTCAATTTTGGATCATTGTGGCCATTTTAACAGTTGTTGAGAGGATTGCTGACACTTTAGTCGCATGGTTGCCCATGTACGGGGAATTGAAGCTGGCCCTCTTTATCTATTTGTGGTATCCAAAGACCAAGGGAACAAAATATGTGTTCGACACTTTACTGCGGCCCTTGATAGATAAACACGAAACAGATATTGAACAGAAGATGGGGGATTGGAGAGGCAAGGGCTGGGAATTGGCCCTATTCTACTGGAAAAACTGTACTGAGTTGAGCCAATCTGCAATCGTCCAAGTCATTAACTACATAGCTAGGCCTGCAGCTGCGGCCCCAGACGACAGGAGGAACGAACGTCACCAACGTCCAAGTGCGCCGCCAGCGCCACCACCACCTCCGCCGCGTCCAAATGATCTGCCCTCGTTCTTCCATAAGCCTCCAAGGAAGACCAAGGACTCGAGCAAGAGCAATGCCATGAAGTGGTTTCCAAGTGCCCCTCCTCTGCCCGGCTCCAGTAATCGGCGTTCCACAGCCACATCGGAGGACTTTGATGTGCAATTTCCCCTTCATGATCAAACAAACTATTTTTATGAAGATCAAAACCACAACCAAGCTCGATTCCGAGGATCCAAAAAAACCTACTAGAAGTTACCAAACAAAAAACTGTACATAAAAAAGAAGACGACAACACTGCAAACCCTCTCCCCGACCAAAGGAAGATAAAAGATTAGATTCATTTTGGAACTTTTCATCGAACATTTACATCCCAATTTTTCTTTTTCTTCTTCTTCTTAGACTGTACTCATAGGGGTGTATGTGCATATATTCATTAATACATAGAACAGAATAGAAACAGATGACGATTTATTTCAGTCAAAGGGGGGAGCTGATTTGTATTTCCCCTGACCACCATTAATAGACAAAACTGAACCCCACAAC ATGAGTATTGATCAATGTAGGATGCTGTTTGGATATGCTTATCCTGCGTTTCAATGCTACAAAACGGTTGTGCAGAGTCGGATTGAAATCCGAGAGCTTCAATTCTGGTGTCAATTTTGGATCATTGTGGCCATTTTAACAGTTGTTGAGAGGATTGCTGACACTTTAGTCGCATGGTTGCCCATGTACGGGGAATTGAAGCTGGCCCTCTTTATCTATTTGTGGTATCCAAAGACCAAGGGAACAAAATATGTGTTCGACACTTTACTGCGGCCCTTGATAGATAAACACGAAACAGATATTGAACAGAAGATGGGGGATTGGAGAGGCAAGGGCTGGGAATTGGCCCTATTCTACTGGAAAAACTGTACTGAGTTGAGCCAATCTGCAATCGTCCAAGTCATTAACTACATAGCTAGGCCTGCAGCTGCGGCCCCAGACGACAGGAGGAACGAACGTCACCAACGTCCAAGTGCGCCGCCAGCGCCACCACCACCTCCGCCGCGTCCAAATGATCTGCCCTCGTTCTTCCATAAGCCTCCAAGGAAGACCAAGGACTCGAGCAAGAGCAATGCCATGAAGTGGTTTCCAAGTGCCCCTCCTCTGCCCGGCTCCAGTAATCGGCGTTCCACAGCCACATCGGAGGACTTTGATGTGCAATTTCCCCTTCATGATCAAACAAACTATTTTTATGAAGATCAAAACCACAACCAAGCTCGATTCCGAGGATCCAAAAAAACCTACTAG MSIDQCRMLFGYAYPAFQCYKTVVQSRIEIRELQFWCQFWIIVAILTVVERIADTLVAWLPMYGELKLALFIYLWYPKTKGTKYVFDTLLRPLIDKHETDIEQKMGDWRGKGWELALFYWKNCTELSQSAIVQVINYIARPAAAAPDDRRNERHQRPSAPPAPPPPPPRPNDLPSFFHKPPRKTKDSSKSNAMKWFPSAPPLPGSSNRRSTATSEDFDVQFPLHDQTNYFYEDQNHNQARFRGSKKTY Homology
BLAST of Carg25900 vs. NCBI nr
Match: KAG7028137.1 (HVA22-like protein i [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 509.2 bits (1310), Expect = 2.0e-140 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of Carg25900 vs. NCBI nr
Match: KAG6596600.1 (HVA22-like protein j, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 493.8 bits (1270), Expect = 8.6e-136 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of Carg25900 vs. NCBI nr
Match: XP_023005652.1 (putative HVA22-like protein g [Cucurbita maxima] >XP_023005653.1 putative HVA22-like protein g [Cucurbita maxima]) HSP 1 Score: 488.4 bits (1256), Expect = 3.6e-134 Identity = 238/241 (98.76%), Postives = 240/241 (99.59%), Query Frame = 0
BLAST of Carg25900 vs. NCBI nr
Match: XP_023540868.1 (putative HVA22-like protein g [Cucurbita pepo subsp. pepo]) HSP 1 Score: 485.7 bits (1249), Expect = 2.3e-133 Identity = 236/241 (97.93%), Postives = 239/241 (99.17%), Query Frame = 0
BLAST of Carg25900 vs. NCBI nr
Match: XP_022940538.1 (putative HVA22-like protein g [Cucurbita moschata] >XP_022940545.1 putative HVA22-like protein g [Cucurbita moschata]) HSP 1 Score: 485.0 bits (1247), Expect = 4.0e-133 Identity = 237/241 (98.34%), Postives = 238/241 (98.76%), Query Frame = 0
BLAST of Carg25900 vs. ExPASy Swiss-Prot
Match: Q8GXE9 (HVA22-like protein j OS=Arabidopsis thaliana OX=3702 GN=HVA22J PE=2 SV=2) HSP 1 Score: 166.4 bits (420), Expect = 4.1e-40 Identity = 81/222 (36.49%), Postives = 135/222 (60.81%), Query Frame = 0
BLAST of Carg25900 vs. ExPASy Swiss-Prot
Match: Q8LE10 (HVA22-like protein i OS=Arabidopsis thaliana OX=3702 GN=HVA22I PE=2 SV=2) HSP 1 Score: 164.9 bits (416), Expect = 1.2e-39 Identity = 84/210 (40.00%), Postives = 124/210 (59.05%), Query Frame = 0
BLAST of Carg25900 vs. ExPASy Swiss-Prot
Match: Q9LR09 (Putative HVA22-like protein g OS=Arabidopsis thaliana OX=3702 GN=HVA22G PE=3 SV=2) HSP 1 Score: 158.7 bits (400), Expect = 8.6e-38 Identity = 70/148 (47.30%), Postives = 102/148 (68.92%), Query Frame = 0
BLAST of Carg25900 vs. ExPASy Swiss-Prot
Match: Q8LEM6 (HVA22-like protein h OS=Arabidopsis thaliana OX=3702 GN=HVA22H PE=2 SV=2) HSP 1 Score: 143.7 bits (361), Expect = 2.9e-33 Identity = 77/211 (36.49%), Postives = 124/211 (58.77%), Query Frame = 0
BLAST of Carg25900 vs. ExPASy Swiss-Prot
Match: Q6NUK4 (Receptor expression-enhancing protein 3 OS=Homo sapiens OX=9606 GN=REEP3 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 8.4e-17 Identity = 43/125 (34.40%), Postives = 70/125 (56.00%), Query Frame = 0
BLAST of Carg25900 vs. ExPASy TrEMBL
Match: A0A6J1L2S0 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111498590 PE=3 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 1.7e-134 Identity = 238/241 (98.76%), Postives = 240/241 (99.59%), Query Frame = 0
BLAST of Carg25900 vs. ExPASy TrEMBL
Match: A0A6J1FQX9 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111446104 PE=3 SV=1) HSP 1 Score: 485.0 bits (1247), Expect = 1.9e-133 Identity = 237/241 (98.34%), Postives = 238/241 (98.76%), Query Frame = 0
BLAST of Carg25900 vs. ExPASy TrEMBL
Match: A0A0A0LBI5 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G778390 PE=3 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 6.0e-111 Identity = 208/246 (84.55%), Postives = 221/246 (89.84%), Query Frame = 0
BLAST of Carg25900 vs. ExPASy TrEMBL
Match: A0A1S3B6S7 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103486661 PE=3 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 6.7e-110 Identity = 207/246 (84.15%), Postives = 220/246 (89.43%), Query Frame = 0
BLAST of Carg25900 vs. ExPASy TrEMBL
Match: A0A5D3DPW1 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004360 PE=3 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 2.2e-108 Identity = 207/248 (83.47%), Postives = 220/248 (88.71%), Query Frame = 0
BLAST of Carg25900 vs. TAIR 10
Match: AT2G36020.1 (HVA22-like protein J ) HSP 1 Score: 166.4 bits (420), Expect = 2.9e-41 Identity = 81/222 (36.49%), Postives = 135/222 (60.81%), Query Frame = 0
BLAST of Carg25900 vs. TAIR 10
Match: AT5G42560.1 (Abscisic acid-responsive (TB2/DP1, HVA22) family protein ) HSP 1 Score: 164.9 bits (416), Expect = 8.5e-41 Identity = 84/210 (40.00%), Postives = 124/210 (59.05%), Query Frame = 0
BLAST of Carg25900 vs. TAIR 10
Match: AT5G42560.2 (Abscisic acid-responsive (TB2/DP1, HVA22) family protein ) HSP 1 Score: 164.9 bits (416), Expect = 8.5e-41 Identity = 84/210 (40.00%), Postives = 124/210 (59.05%), Query Frame = 0
BLAST of Carg25900 vs. TAIR 10
Match: AT5G42560.3 (Abscisic acid-responsive (TB2/DP1, HVA22) family protein ) HSP 1 Score: 164.9 bits (416), Expect = 8.5e-41 Identity = 84/210 (40.00%), Postives = 124/210 (59.05%), Query Frame = 0
BLAST of Carg25900 vs. TAIR 10
Match: AT1G75700.1 (HVA22-like protein G ) HSP 1 Score: 158.7 bits (400), Expect = 6.1e-39 Identity = 70/148 (47.30%), Postives = 102/148 (68.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|