Carg25897 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg25897
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionubiquitin-conjugating enzyme E2 variant 1D
LocationCarg_Chr06: 2444895 .. 2451338 (+)
RNA-Seq ExpressionCarg25897
SyntenyCarg25897
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCACTTTATTCCCCTCGTTCTGCCCTTCATTTTCTTAGATTCTTCTTCTTCTTCGTCAAGTGTTCCATCTTCGTTCACTCTTCGATCAGATCCTTGCTAGCTGATCGTATTTAACCATTCTTGATTCATCTATGACGCTTGGTTCAGGAGGCTCGAGTGTTGTTGGTCAGTCTGTTAATCAAATTTTGATTTGATCTCTTGTTTTCTCTTTCACATCCTTCAAATTTTATGCTGATTTGAGTATTTCATCGGTAGTTTCGGTAATCGTCGATGGGCTTGTGTTAATTGTTCAATAATTTTGTTTTTTGTTTGACCTCTTTGTATATATCTGTGCGTTACATTTACGCCGTTGATTTAGTTTCTTCTGACACTCTTGATTTGCTTTGTGTGTTCTTTGAGATTTGGTTTGCTCTAAAATCTAAATGCTATACTTGATTTTGTAGGTCAGATTAATTTTGATGCGAAATTTTTTTTTGGAGCTTCATGATTGAACTCGGCTCACTTTTCTGTGCATGAACTCCGTGGCTTATTTTGGATAGATATCTGCTTCATCGTTTTTGTTTGGGGGAGGGTTTGACTGCTGGCTACTAGATTCACTTGTTTTTTTATGCATAGCAACTCTGTACATGTTCCAGACTGACGAATCAGAGTTTTCTTTGTTATACGCATATGTATGCTTGGGGGTAATCTAATGATGCGATTTGTGTTTCAAGCCTGTAGGGTCTTTGTGCTATATCTTCTTATATTCTGGCTAGGTTCTGCATTCAAAATTTAGTCATAATTCAAGGTGAATTGGTTTTATTAATCATCTAAAAAATCCAAACAAGGAAGAAAACATTCTACTTTTCAGTGTTCCAGATATTTGACTTTTTTGTTACATGCATACTCAACTTTAACATTTTTGAGCCTTGGGCTGGAGACTTGCTTTGAGCGATGTTCAAATGAACTCTGAAAACAACGATACAAAGAATCAGTAGAACTTTCTGTGATAACAATGGTGATTTTTAAGAATTATCTTTTAGAATATATATTTAAGAAAGACGAACTGACGATGCAAGATTTTTTTTTTTCTTTCTTTTTTATTTTTGAAAAAAATAATTTTTTAATTTTTATAATGATAATTATTGTTATGTTCAGTAATGCCTGATAACGAACTTTTATTGTTTTTATCAATGCTTTCGTTTTTAGATTGAGGCTGATTTCTTTCCCTCATTACTTCGAGGTTTGTGCGTTCTTCAGGAGAAAAAGCCTCGAGGGTGTTTTTTTTTTTACAATCATAACATTGTTTGGTTATTGTCTAAGCATTAGACGTGAAAATTTAACTCTAGCTTGTTTTCCTCCGATGTTGAACAATATAGGATTTGCCAATGATAAAAAAAAAAAAAAGAAGAAGAAGAAAGCTTCTGTTCTGCTATATAAGTGTTTAATGAGAATTGTGCACTTTTTTTTCTTAAAATTAAAATAGTTTACAAATGTGGACAGAAATTTACTTAACACAATTAGAAGGTAATTTTTTTTTCCTTCTGATCACTTAATAGGCTGTTATGTGGTTGGGAGATTATCCTGCCAGCTTCCTTTTTGTCCTTGTTCATTAAATATTTTGGAGAATGATGTTTTCAATGGTTTCCTCAACTGTCTCCTTGGCATTCGGCTTCAGTAAGAGGCAAGATGCCTAGAGCTTCATGGCTTCAGTGATCATTGGGTGCACACGATAAGTTGCACATTTTGGTTGACATTTGCTACTCATCAATGTGAATTTGTGGCAACCTGTGTGAATGCTTTACTCAAGAGACTTCACACTCAGCCCTCATTGTTCCTCTTTGATAGCAAGCAAGTCACTTGCTTTCCGTATATTTTGACTTCAGCCTTTGTCTATTGTTCTTCGTGTCATACTGAGCTCATCTGTAGTCCTAAAGCTATAGAGTCCCCCACACCCCACAATTTCCTAATACTACATCTCTTTCCTTTTATTTTCCCACGTTTTTATCTTTATGATTTTTCCTTCTCCTTTCTACTTCAATGCTTCTTCTTCCTTCTTATTTACTTCTTTCTTTATTTTCATTATTTATTTCTAGTGGGTTAACTGTCTCTTAATAGGATGATATCTCCTTTCCTTCTTCCTTTGATTTTCTTTCTATTTACAGCCTCACTTCCTCTCGAACTGTCAGCAACTGATTGAATTTTTTCTCTTTATCTGGCCTAGTCAACTATACTGCAACAAGTCTACAGGACATCTGTCTATCCTATAACGTTAGATATTGTAAAATTCTTGGTCTATGTAATGTTTTAACCATTGAGCCTTAGCGCACCATTTTGTTTCCCAGTATTAGTCGTAATTACCATGGTTATTAAAAAAGGTTGATATTTAATGCTCTAGTATTCTCTGTCTTAATTTCTTTTACAAATTATTGCTATAGATATTAATTAATTAACCAATTAATTTTATGCATACCTCACTTTACTGGGGATGTGCTTTTGGTGCCATCAGTGTGCCTTCTACCTCACGATAATCTCAAGTTTTTGTCTTAGGGTGCATCTTGCACTGTGATAATACTGCTGAAGAATGAACATTTGATAGACAAGTGGTTCTATACATTTGAAAAATTAGGAATTTAAAATGAACAAAAATGGTTCTGTTCAGTCTGTGTCGAGCTATGCTTCCGAGGTGTCTTGTTTATCCTAATTTGGTAGACATACTTAACCAATATTTTATTCCTTGTGTAACGCTAGATGTGCATTAATATGTGGAGTTCATGGAATCCACTTTTTTGTTGGGCTTGTTATGCCCTTGTTTTTCTTTCATTTCTCTCAAAGAAAGCTGTAAAAAAAAAGGCAATATATATATATTCTTTCGATCAAAGGATACTTAAGTTAGTTCTAAAAGTTCATGTTAGTTAGTGGGTTTGTGCTATTGAGTTTGTTAGATTGATTAGGTAATTTTTTCTGTTGCAAGTAGTACTTAACAAAGGGAGTGAGAAGAGAATGAGGTTGGCAAATATTGAGTAGTCCAGGAGGTTTGAGAATGGAGAGAGTAAGGGGTGGGATCTCAAATTTCTCTTGCTTTGCCTTGTTTATTTTATTTAACACAAATATCAACATGGTTTCAATCAAATGGTATCAAAGGGACAGTTCTGGCTATAGATGAAAGAACCCTGAGGTGCAAATGAGATTTTGGAGACGATTGATCTCTCTTAAATGAGTTTGTGTAAATTATTGGTCAAATGATGGATACCATTGTCTCTGAAAATTCCGATATCTGATTGATAAGATTGACAAATTCAAAGAAAGATGTGTATCTTGGTCGAATCACGATGTCTAAGGATAAAATTTGGTCGACTATATAGACTTATTGATGCAAAGGTGGGACTTGTGCCAGACAGGGACCCAAGATTCAATAAGCACCGAAGTGGAAGTGGAATCATCTGGGAAATGTGAAATGGTACAACATGAGGTGGTTAAACACAAATTGGAATCGGGTGTTTGAAGGGAGTTGAATCTGTTTAGAAACTAAATATGTAACCTGATGCTTATTAAGTATGGTCGTAGTTTGAAAATTTGTGCAATATGGGACTTGATTATGTGAGCTTACATCTATGCCAAGGAGATTCTCAAGAAGGTAGGTCAATGGTAACTAAGCTTGACAAATTGGGGACCGCTTTTGGAGAAGTTAAGTTTGATATGCGGGGGATAATGTATCCCAAGATGGGCACAATTCAGGGGGTGTTGGTCGTCAATTTTTATGATTGATATGCTCTGTATAGAATTATTTGGTGGAAATTGGAAATGGCCCTTATCTTTTGATACCACGCAGTAAGCTACTTAAAGAGCATTTGCTTCCTTTTTTTGGGGCTTATTTTATAGGGCTGTTAAGTTTTGGCGTATGCACAAATGCCAAGCACTTGTAGGATGAGGGTAGTCAAATGGGAATATTTGCATATTGTTCTCCAAGGAGATTTCTAGGGCGGCAAGTAATACTAAATGTTATGTTGGTGAGTTAGGGGACATACGGAATAGTTGGAGTTTATAATAATGGTTAGAGAGATTAGTTAATAGCAAGGGGTTATAAAAATAAATGGAAATGAAGCAGGATGGGCAGAGCTGATAATGATCAAGTACCTCAAGTAGCTTGGAATTGGTAGAATAAGGGGAGAGCTCTCAAATTTCTTGTCTTATCTTTTCTTCATGTTAGGTCAAATATTTATTTGATTCATCGAAGTGATAGCATTTGAAGCTTTTGATACAGGAGATGGTTTTGAGAGCACCCTGTTGAAAGTAGGAGAAATGTCTGAAGGGACATTCTTGAATATTTTAGTACAGATATCAATATGATTGTACTTCTCGCTGAATAAATTTAAATTATGTGGAGTGATTTTAAAGCAGTCGGTAGGTTCCACTCTTTTTCTATGTTGTTGCTCTTTGAGAGTGCAAGTCAATTAAATGATTTGTACATTGCAGATTGTAGATTTGAATGACGTTGATGTCTCGCCAATGGCACTTAAGCATCTTTTAAGTGTTTGCTTTCCATCACAGTTCCTAGGAACTTCAGGTTGCTTGAGGAACTTGAACGTGGAGAAAAAGGCATTGGCGATGGCACTGTGAGCTATGGAATGGATGATGGAGATGACATTTATATGCGTTCATGGACTGGCACCATTATTGGTCCACACAATGTAATGGCTTCTGCTCTTCTTTTCAGGACTTGTAATTTAATGGCTTGCTCGTGAAGAAAATGTGAACTTTTATAATTCATTCTTACCCAATAAAAGAACTTTCCAAAAAAGAAAAAATCTTTATCTATATAACTCATAATGAAACCCCCATTCCTGCTCTTTCCCAAATGTAAATAGCATTGTTTTTCTACTTGAAGTTTGAAGAAGAGCTCTCATTTTGAAAAGTTGTGTATGAAAAACTTGAAGGGGCAGGTTTTGTGAATGGTTGAAATAATAAGTGCTGTTGCGAGTCTTCTGCAGAAAATTAGCAGCCTACCTTATTAGACAGTTCCTATTTTATGCCCACATACAATGCAGTAAACATTCATCACGAGTCTTTTTTCTTGCAGACGGTACATGAAGGTAGAATTTATCAGTTGAAGCTGTTCTGCGACAAAGATTACCCTGAGAAGCCACCAAGTGTTCGTTTTCATTCAAGAGTCAACATGACATGTGTGAACCACGAAACTGGAGTGGTATCTCTGATTTCCTTCGACAATTTGAATTTCTTAGTACTTATTTTTTTTTAACTAAAATTTGATGTTTGAAAGAAAGAACAAAAGATAATAGTAGTATATATGTTTAATTGTATATTAAACTAGTGCTTTCAGAATTGTAGCTCTGATAGCAGTAAGTTCACCAACATCTTATCGTCTGCCTATCTAGATGATTTTATAAACTGATCTTGCCCTTCTCCAAGGAGCTTATTATGTTTTGTTACGTTGTGATTGGTTTCCAACAGGTTGAGCCAAAGAAATTTGGACTTCTTGCAAATTGGCAGCGAGAGTACTCCATGGAGGACATACTTACACAGCTGAAAAAGGAAATGGCAGCCCCACAAAACCGAAAGCTGGTCCAACCTCCGGAAGGCACCTACTTCTAGCCTCGAGATCATGTACACATGATCATATGGTGTGCAATATTCCAATATAGTTTGCAATGCTGTGTAATCCTGTTGAAGTTGAGCACATTCCAGGATAGAACCAAAATCTTGATGATTTGCATTGCTTCATTGTTGATCAGTAGTCTTTTCTTGTCGGTCTGTGTTAAAGGGATGATGGTCTTTTACTGATGGAAGTGTATTGAATACAAATTTACATAATAGTATTATCTAATTTGCGCGTTGGTTGTTTGCTGCAATACTCTCTCTATCTCTGTCGCGCGCGCGCGCACACACACACGGGAGAGTGATGATGGTAATCAATTTCCGAAGGTACCAGGTCTAATCAAGCATGAAAGTCAGGAAAGGTGTCTCAAAAAAAAGAAAATGTCGAATAGCATTTTCAGTTGACAATATAATTCTGTTCTTCAAGTCATTGTGGAATGCTTTCATCAAGTATTCAGTTTTACTTCATGTTCCTAGCTTCATTGGAGTCGATGCTTTATTCTCTTTAGGAGTTAGACTTGAAAGTAACAAATTTAAGATCACATAACAGGGACGACGTTTCTTGAAGTGCTCGGCCTATGGTGATGAGAAGAGTCACTTTGAATCTGGTATGATTTCTAACTTCACATTTATGATTATACTTTTCATACATGAAAATTCCTTTTTTCAATTCTATCATTGTTAAGCATTTCTAACTAAGGTATCATAGCTATTCTGTTGTTAGCCTATTATCTTTGTCAATGATCTGTAGAGAAGCTGACTCGAATGAAATGTTATTGTCTTGTTCAACTCTTTAAACTTTAACGCCTTTCATTCATTTACAATAAAAGTAGGAGATAGGTTGATG

mRNA sequence

TTCCACTTTATTCCCCTCGTTCTGCCCTTCATTTTCTTAGATTCTTCTTCTTCTTCGTCAAGTGTTCCATCTTCGTTCACTCTTCGATCAGATCCTTGCTAGCTGATCGTATTTAACCATTCTTGATTCATCTATGACGCTTGGTTCAGGAGGCTCGAGTGTTGTTGCATCTTTTAAGTGTTTGCTTTCCATCACAGTTCCTAGGAACTTCAGGTTGCTTGAGGAACTTGAACGTGGAGAAAAAGGCATTGGCGATGGCACTGTGAGCTATGGAATGGATGATGGAGATGACATTTATATGCGTTCATGGACTGGCACCATTATTGGTCCACACAATACGGTACATGAAGGTAGAATTTATCAGTTGAAGCTGTTCTGCGACAAAGATTACCCTGAGAAGCCACCAAGTGTTCGTTTTCATTCAAGAGTCAACATGACATGTGTGAACCACGAAACTGGAGTGGTTGAGCCAAAGAAATTTGGACTTCTTGCAAATTGGCAGCGAGAGTACTCCATGGAGGACATACTTACACAGCTGAAAAAGGAAATGGCAGCCCCACAAAACCGAAAGCTGGTCCAACCTCCGGAAGGCACCTACTTCTAGCCTCGAGATCATGTACACATGATCATATGGTGTGCAATATTCCAATATAGTTTGCAATGCTGTGTAATCCTGTTGAAGTTGAGCACATTCCAGGATAGAACCAAAATCTTGATGATTTGCATTGCTTCATTGTTGATCAGTAGTCTTTTCTTGTCGGTCTGTGTTAAAGGGATGATGGTCTTTTACTGATGGAAGTGTATTGAATACAAATTTACATAATAGTATTATCTAATTTGCGCGTTGGTTGTTTGCTGCAATACTCTCTCTATCTCTGTCGCGCGCGCGCGCACACACACACGGGAGAGTGATGATGGTAATCAATTTCCGAAGGTACCAGGTCTAATCAAGCATGAAAGTCAGGAAAGGTGTCTCAAAAAAAAGAAAATGTCGAATAGCATTTTCAGTTGACAATATAATTCTGTTCTTCAAGTCATTGTGGAATGCTTTCATCAAGTATTCAGTTTTACTTCATGTTCCTAGCTTCATTGGAGTCGATGCTTTATTCTCTTTAGGAGTTAGACTTGAAAGTAACAAATTTAAGATCACATAACAGGGACGACGTTTCTTGAAGTGCTCGGCCTATGGTGATGAGAAGAGTCACTTTGAATCTGGTATGATTTCTAACTTCACATTTATGATTATACTTTTCATACATGAAAATTCCTTTTTTCAATTCTATCATTGTTAAGCATTTCTAACTAAGGTATCATAGCTATTCTGTTGTTAGCCTATTATCTTTGTCAATGATCTGTAGAGAAGCTGACTCGAATGAAATGTTATTGTCTTGTTCAACTCTTTAAACTTTAACGCCTTTCATTCATTTACAATAAAAGTAGGAGATAGGTTGATG

Coding sequence (CDS)

ATGACGCTTGGTTCAGGAGGCTCGAGTGTTGTTGCATCTTTTAAGTGTTTGCTTTCCATCACAGTTCCTAGGAACTTCAGGTTGCTTGAGGAACTTGAACGTGGAGAAAAAGGCATTGGCGATGGCACTGTGAGCTATGGAATGGATGATGGAGATGACATTTATATGCGTTCATGGACTGGCACCATTATTGGTCCACACAATACGGTACATGAAGGTAGAATTTATCAGTTGAAGCTGTTCTGCGACAAAGATTACCCTGAGAAGCCACCAAGTGTTCGTTTTCATTCAAGAGTCAACATGACATGTGTGAACCACGAAACTGGAGTGGTTGAGCCAAAGAAATTTGGACTTCTTGCAAATTGGCAGCGAGAGTACTCCATGGAGGACATACTTACACAGCTGAAAAAGGAAATGGCAGCCCCACAAAACCGAAAGCTGGTCCAACCTCCGGAAGGCACCTACTTCTAG

Protein sequence

MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLANWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF
Homology
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BLAST of Carg25897 vs. NCBI nr
Match: KAG7028134.1 (Ubiquitin-conjugating enzyme E2 variant 1D [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 331.3 bits (848), Expect = 4.6e-87
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120
           GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA
Sbjct: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120

Query: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF
Sbjct: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 156

[Close]
BLAST of Carg25897 vs. NCBI nr
Match: TXG58172.1 (hypothetical protein EZV62_016001 [Acer yangbiense])

HSP 1 Score: 304.7 bits (779), Expect = 4.6e-79
Identity = 144/156 (92.31%), Postives = 147/156 (94.23%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSGGSSVV    C+    VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGGSSVVVFLVCV----VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120
           GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLL+
Sbjct: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLS 120

Query: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           NWQREY+MEDILTQLKKEMAAP NRKLVQPPEGTYF
Sbjct: 121 NWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 152

[Close]
BLAST of Carg25897 vs. NCBI nr
Match: KAG6596597.1 (Ubiquitin-conjugating enzyme E2 variant 1D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 304.3 bits (778), Expect = 6.1e-79
Identity = 146/156 (93.59%), Postives = 146/156 (93.59%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSGGSSVV          VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGGSSVV----------VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120
           GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA
Sbjct: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120

Query: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF
Sbjct: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 146

[Close]
BLAST of Carg25897 vs. NCBI nr
Match: XP_022940580.1 (ubiquitin-conjugating enzyme E2 variant 1D [Cucurbita moschata])

HSP 1 Score: 302.4 bits (773), Expect = 2.3e-78
Identity = 145/156 (92.95%), Postives = 145/156 (92.95%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSGGSSVV          VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGGSSVV----------VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120
           GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA
Sbjct: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120

Query: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           NWQREYSMEDILTQLKKEMAAP NRKLVQPPEGTYF
Sbjct: 121 NWQREYSMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146

[Close]
BLAST of Carg25897 vs. NCBI nr
Match: XP_021623545.1 (ubiquitin-conjugating enzyme E2 variant 1D isoform X1 [Manihot esculenta] >OAY40795.1 hypothetical protein MANES_09G049200v8 [Manihot esculenta])

HSP 1 Score: 302.4 bits (773), Expect = 2.3e-78
Identity = 143/156 (91.67%), Postives = 146/156 (93.59%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSGGSSVV       S+ +PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGGSSVVGE-----SLDLPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120
           GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLL 
Sbjct: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLV 120

Query: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           NWQREY+MEDILTQLKKEMAAP NRKLVQPPEGTYF
Sbjct: 121 NWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 151

[Close]
BLAST of Carg25897 vs. ExPASy Swiss-Prot
Match: Q9SVD7 (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UEV1D PE=1 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 2.9e-76
Identity = 136/156 (87.18%), Postives = 140/156 (89.74%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSGGSSVV          VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGGSSVV----------VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120
           GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPP+VRFHSRVNM CVNHETGVV+PKKFGLLA
Sbjct: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLA 120

Query: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           NWQREY+MEDIL QLKKEM+   NRKLVQPPEGT F
Sbjct: 121 NWQREYTMEDILVQLKKEMSTSHNRKLVQPPEGTCF 146

[Close]
BLAST of Carg25897 vs. ExPASy Swiss-Prot
Match: Q9SJ44 (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UEV1C PE=1 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 7.2e-75
Identity = 131/156 (83.97%), Postives = 140/156 (89.74%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSG            S+ VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGS-----------SVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120
           GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPP+VRFHSR+NMTCVNH+TGVV+ KKFG+LA
Sbjct: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLA 120

Query: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           NWQR+Y+MEDILTQLKKEMAA  NRKLVQPPEGT+F
Sbjct: 121 NWQRQYTMEDILTQLKKEMAASHNRKLVQPPEGTFF 145

[Close]
BLAST of Carg25897 vs. ExPASy Swiss-Prot
Match: Q93YP0 (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UEV1A PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 9.5e-59
Identity = 101/134 (75.37%), Postives = 115/134 (85.82%), Query Frame = 0 

Query: 20  ITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLK 79
           + VPRNFRLLEELERGEKGIGDGTVSYGMDD DDIYM+SWTGTI+GP NT +EG+I+QLK
Sbjct: 8   VVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLK 67

Query: 80  LFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLANWQREYSMEDILTQLKKEM 139
           LFC K+YPE PP+VRF +R+NM CVN ETGVVEP  F +L NW+REY+MEDIL +LKKEM
Sbjct: 68  LFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKEM 127

Query: 140 AAPQNRKLVQPPEG 154
               NRKL QPPEG
Sbjct: 128 MTSHNRKLAQPPEG 141

[Close]
BLAST of Carg25897 vs. ExPASy Swiss-Prot
Match: Q9CAB6 (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UEV1B PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.8e-58
Identity = 100/134 (74.63%), Postives = 116/134 (86.57%), Query Frame = 0 

Query: 20  ITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLK 79
           + VPRNFRLLEELERGEKGIGDGTVSYGMDD DDI M+SWTGTI+GPHNT +EG+I+QLK
Sbjct: 8   VVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLK 67

Query: 80  LFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLANWQREYSMEDILTQLKKEM 139
           LFC KDYPE PP+VRF SR+NM CVN E GVV+P  F +L+NW+RE++MED+L QLKKEM
Sbjct: 68  LFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEM 127

Query: 140 AAPQNRKLVQPPEG 154
            + QNRKL QP EG
Sbjct: 128 MSSQNRKLAQPLEG 141

[Close]
BLAST of Carg25897 vs. ExPASy Swiss-Prot
Match: Q54D06 (Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum OX=44689 GN=ube2v PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 5.4e-46
Identity = 78/136 (57.35%), Postives = 105/136 (77.21%), Query Frame = 0 

Query: 21  TVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKL 80
           T+PRNF LLEELE GEK  GDGT+SYG++  DDI + SW GTIIGP NT  + R Y LKL
Sbjct: 3   TIPRNFVLLEELESGEKSTGDGTISYGLESPDDILLSSWIGTIIGPQNTPFDNRFYSLKL 62

Query: 81  FCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLANWQREYSMEDILTQLKKEMA 140
           +CDKDYP KPP+VRF +++N+ CVN + GVV+PK   +L+NW  +  +++IL++L++EM+
Sbjct: 63  YCDKDYPNKPPTVRFTTKINIGCVNQQNGVVDPKNLPILSNWTSKNRIQNILSELRREMS 122

Query: 141 APQNRKLVQPPEGTYF 157
           +  N+KLVQPPEG  F
Sbjct: 123 SSSNKKLVQPPEGANF 138

[Close]
BLAST of Carg25897 vs. ExPASy TrEMBL
Match: A0A5C7HPQ9 (UBC core domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_016001 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.3e-79
Identity = 144/156 (92.31%), Postives = 147/156 (94.23%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSGGSSVV    C+    VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGGSSVVVFLVCV----VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120
           GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLL+
Sbjct: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLS 120

Query: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           NWQREY+MEDILTQLKKEMAAP NRKLVQPPEGTYF
Sbjct: 121 NWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 152

[Close]
BLAST of Carg25897 vs. ExPASy TrEMBL
Match: A0A2C9V809 (UBC core domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_09G049200 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-78
Identity = 143/156 (91.67%), Postives = 146/156 (93.59%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSGGSSVV       S+ +PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGGSSVVGE-----SLDLPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120
           GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLL 
Sbjct: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLV 120

Query: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           NWQREY+MEDILTQLKKEMAAP NRKLVQPPEGTYF
Sbjct: 121 NWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 151

[Close]
BLAST of Carg25897 vs. ExPASy TrEMBL
Match: A0A6J1FR14 (ubiquitin-conjugating enzyme E2 variant 1D OS=Cucurbita moschata OX=3662 GN=LOC111446135 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-78
Identity = 145/156 (92.95%), Postives = 145/156 (92.95%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSGGSSVV          VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGGSSVV----------VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120
           GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA
Sbjct: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120

Query: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           NWQREYSMEDILTQLKKEMAAP NRKLVQPPEGTYF
Sbjct: 121 NWQREYSMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146

[Close]
BLAST of Carg25897 vs. ExPASy TrEMBL
Match: D7TH48 (UBC core domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g02580 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.5e-78
Identity = 143/156 (91.67%), Postives = 146/156 (93.59%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSGGSSVV          VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGGSSVV----------VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120
           GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSR+NMTCVNHETGVVEPKKFG+LA
Sbjct: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGILA 120

Query: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           NWQREY+MEDILTQLKKEMAAPQNRKLVQPPEGTYF
Sbjct: 121 NWQREYTMEDILTQLKKEMAAPQNRKLVQPPEGTYF 146

[Close]
BLAST of Carg25897 vs. ExPASy TrEMBL
Match: F8RWS9 (Protein binding/ubiquitin-protein ligase 1 OS=Hevea brasiliensis OX=3981 GN=GH714_037798 PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.3e-78
Identity = 143/156 (91.67%), Postives = 145/156 (92.95%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSGGSSVV          VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGGSSVV----------VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120
           GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSR+NMTCVNHETGVVEPKKFGLLA
Sbjct: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLA 120

Query: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           NWQREY+MEDILTQLKKEMAAP NRKLVQPPEGTYF
Sbjct: 121 NWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146

[Close]
BLAST of Carg25897 vs. TAIR 10
Match: AT3G52560.1 (ubiquitin E2 variant 1D-4 )

HSP 1 Score: 285.8 bits (730), Expect = 2.1e-77
Identity = 136/156 (87.18%), Postives = 140/156 (89.74%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSGGSSVV          VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGGSSVV----------VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120
           GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPP+VRFHSRVNM CVNHETGVV+PKKFGLLA
Sbjct: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLA 120

Query: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           NWQREY+MEDIL QLKKEM+   NRKLVQPPEGT F
Sbjct: 121 NWQREYTMEDILVQLKKEMSTSHNRKLVQPPEGTCF 146

[Close]
BLAST of Carg25897 vs. TAIR 10
Match: AT2G36060.1 (MMS ZWEI homologue 3 )

HSP 1 Score: 281.2 bits (718), Expect = 5.1e-76
Identity = 131/156 (83.97%), Postives = 140/156 (89.74%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSG            S+ VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGS-----------SVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120
           GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPP+VRFHSR+NMTCVNH+TGVV+ KKFG+LA
Sbjct: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLA 120

Query: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           NWQR+Y+MEDILTQLKKEMAA  NRKLVQPPEGT+F
Sbjct: 121 NWQRQYTMEDILTQLKKEMAASHNRKLVQPPEGTFF 145

[Close]
BLAST of Carg25897 vs. TAIR 10
Match: AT3G52560.2 (ubiquitin E2 variant 1D-4 )

HSP 1 Score: 281.2 bits (718), Expect = 5.1e-76
Identity = 136/157 (86.62%), Postives = 140/157 (89.17%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSGGSSVV          VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGGSSVV----------VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHN-TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLL 120
           GTIIGPHN TVHEGRIYQLKLFCDKDYPEKPP+VRFHSRVNM CVNHETGVV+PKKFGLL
Sbjct: 61  GTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLL 120

Query: 121 ANWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           ANWQREY+MEDIL QLKKEM+   NRKLVQPPEGT F
Sbjct: 121 ANWQREYTMEDILVQLKKEMSTSHNRKLVQPPEGTCF 147

[Close]
BLAST of Carg25897 vs. TAIR 10
Match: AT2G36060.2 (MMS ZWEI homologue 3 )

HSP 1 Score: 276.6 bits (706), Expect = 1.3e-74
Identity = 131/157 (83.44%), Postives = 140/157 (89.17%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSG            S+ VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGS-----------SVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHN-TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLL 120
           GTIIGPHN TVHEGRIYQLKLFCDKDYPEKPP+VRFHSR+NMTCVNH+TGVV+ KKFG+L
Sbjct: 61  GTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVL 120

Query: 121 ANWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           ANWQR+Y+MEDILTQLKKEMAA  NRKLVQPPEGT+F
Sbjct: 121 ANWQRQYTMEDILTQLKKEMAASHNRKLVQPPEGTFF 146

[Close]
BLAST of Carg25897 vs. TAIR 10
Match: AT2G36060.3 (MMS ZWEI homologue 3 )

HSP 1 Score: 275.0 bits (702), Expect = 3.7e-74
Identity = 130/156 (83.33%), Postives = 139/156 (89.10%), Query Frame = 0 

Query: 1   MTLGSGGSSVVASFKCLLSITVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60
           MTLGSG            S+ VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT
Sbjct: 1   MTLGSGS-----------SVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWT 60

Query: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLA 120
           GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPP+VRFHSR+NMTCVNH+TG V+ KKFG+LA
Sbjct: 61  GTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTG-VDSKKFGVLA 120

Query: 121 NWQREYSMEDILTQLKKEMAAPQNRKLVQPPEGTYF 157
           NWQR+Y+MEDILTQLKKEMAA  NRKLVQPPEGT+F
Sbjct: 121 NWQRQYTMEDILTQLKKEMAASHNRKLVQPPEGTFF 144

The following BLAST results are available for this feature:
BLAST of Carg25897 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7028134.14.6e-87100.00Ubiquitin-conjugating enzyme E2 variant 1D [Cucurbita argyrosperma subsp. argyro... [more]
TXG58172.14.6e-7992.31hypothetical protein EZV62_016001 [Acer yangbiense][more]
KAG6596597.16.1e-7993.59Ubiquitin-conjugating enzyme E2 variant 1D, partial [Cucurbita argyrosperma subs... [more]
XP_022940580.12.3e-7892.95ubiquitin-conjugating enzyme E2 variant 1D [Cucurbita moschata][more]
XP_021623545.12.3e-7891.67ubiquitin-conjugating enzyme E2 variant 1D isoform X1 [Manihot esculenta] >OAY40... [more]
BLAST of Carg25897 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SVD72.9e-7687.18Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UE... [more]
Q9SJ447.2e-7583.97Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UE... [more]
Q93YP09.5e-5975.37Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UE... [more]
Q9CAB62.8e-5874.63Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UE... [more]
Q54D065.4e-4657.35Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum OX=... [more]
BLAST of Carg25897 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5C7HPQ92.3e-7992.31UBC core domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_016001... [more]
A0A2C9V8091.1e-7891.67UBC core domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_09G0492... [more]
A0A6J1FR141.1e-7892.95ubiquitin-conjugating enzyme E2 variant 1D OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
D7TH481.5e-7891.67UBC core domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g025... [more]
F8RWS93.3e-7891.67Protein binding/ubiquitin-protein ligase 1 OS=Hevea brasiliensis OX=3981 GN=GH71... [more]
BLAST of Carg25897 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G52560.12.1e-7787.18ubiquitin E2 variant 1D-4 [more]
AT2G36060.15.1e-7683.97MMS ZWEI homologue 3 [more]
AT3G52560.25.1e-7686.62ubiquitin E2 variant 1D-4 [more]
AT2G36060.21.3e-7483.44MMS ZWEI homologue 3 [more]
AT2G36060.33.7e-7483.33MMS ZWEI homologue 3 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 26..154
e-value: 2.4E-4
score: 25.4
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 19..150
NoneNo IPR availablePANTHERPTHR24068:SF318UBIQUITIN-CONJUGATING ENZYME/RWD-LIKE PROTEIN-RELATEDcoord: 19..150
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 10..156
e-value: 7.0E-43
score: 147.7
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 21..156
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 53..146
e-value: 8.0E-14
score: 51.5
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 23..156
score: 32.615891

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25897-RACarg25897-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006301 postreplication repair
biological_process GO:0070534 protein K63-linked ubiquitination
cellular_component GO:0005634 nucleus
molecular_function GO:0016746 acyltransferase activity
molecular_function GO:0004839 ubiquitin activating enzyme activity