Carg25845 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25845
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein OSB1, mitochondrial-like
Location	Carg_Chr12: 3039413 .. 3043188 (-)
RNA-Seq Expression	Carg25845
Synteny	Carg25845

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGGTCCACTGGAAAAGCAAACGTGCTCGTCGGAAAAATGCGCCAAGTTCTCCTTCGAAAGTACCGGGAAACTCAGCCGAGAAAACTGGACTGATCGCCGTCAAGGTCGCCGTCGACGTCCTCCGCACAATCGTCCGATGGCTATGAGGGCCTTTCGCCATCTACTTCCTCTTAGACAAGTAACTGTATCGCCTTTGCCGCCGGTAGCGTTCTTCTCTTCGTTTTCGTCAGTAAGCACTAAATCGACGAACTGCGTCGCCACTGATGCCAGTGGCGGAGGTTTGGTGCACAGAAATCGTCTAAAATTTAAGTGGAACTCGGCTAAGTTCGTTGGTACGGTGGAACAGCCGCTTAAAGTGCATACCAGGAATGGCGACACAGTTTATGCTTGGACATTTCTTCGAGCTAAAGTCTCCCCTGATTCTAACAGCAGTTCTAGGTAAATTCTTGCATGTTTTGTTTTATAAAAAAAATTGGATTCAGTCCCGTTCGTAACCGCTGTATGAACATCACGTTCTTGTTTTGTTATTTTTGTGTTATTTTTTCTTGTTTTGTTTTGTTTAAATCGACATTCAAGCACAGTGAATATAGCAGGCCTTTTTTTAGTTGGATGCATTTCAATGATCTAGGACCAATAAGTTTTGTATTTTCTCTGTTTATACATTCTTTTCTGCTCATAACCTATTAGACCTCTTTCGTGCTGGTTCATGTTGTTACCTAGGAATCTAGTTTTGGCTATCATTCTGGCTATCAGAGGTTTGAATAATGTTGTAAAAAATTGTTCTTCAGTATGTGCCTAATTCCCCTGTATTGGTTCATGGCCTTATACATGCATATTTGCAGGATTTTGCTGAAACTGTGGGAAGAAATGGCTGAATCATACATTGAACGTCTTAAACCGAATGACTTCATTTATGTTGCTGGTACTTTAGAGTCTTATAAGAAGGCTGATAAGTGCGGGAAGTCTTTTTTATCTTATGAGGTTGGATGTTCAAGTATTCACATGAAGATATTGTTCTTTTTAACGTTTTCATTGTCAAAATTTTCAGTACTCTGTTATGTTGTGATCCTAGCCAGTTAGGGTTTCTGTTTTCCTTTTAAACCTATGAGGATCTTCTGATCATTCAAGTATTTTTATAGACATATAGGATATTAAGTTATTTAGGAAATTGGCAGCAAATTTACTGTAAATTTTGTTACTAAAATCTGGAAACCGAAAGATGTGTTTGTATTTTCAAGATCAGTTTGGATTGAAGCACCACATCGTTTTCATTCTTTCGATGAGATGCTGTCCTCCGTCTCTGTTCTTTAATACAAGAACACGCTATCCGTTTCATTTTTTCATTTGTGCTTCCAGGCTACCACAACTTATAAATTCCTTCTGTAAACATAGTCTAACTTATGTAATATTCGGAAGTCGTCCTCACTGTAATATCTGTGGAGTTCAGGAGATCCATCCCCTCACTTTTGTATATCCCTTCTCCCTGAAGTCTTATTTGGTTCCAAAAGGAATTTAATTTATCAGTTCCCTGTGATTTAGGTTTCTCTGTGACACTTCTTTTAACTAGGAATGCATATTCAACATGATCATACTGAAGATTACTAATTTTATATCTATTTTTTTTTCTCCTTGTTTTCCCTGCAGTTAACTGTGTCAGAGTTGAATCACATTCGACAAAATGCTCGAGGCTCAAAAAGTCAAGATTCTCTGGGCATGATACATGAAGAGGGTATGTTTTGAACCTTTTGCATTTTCAGTTGATGGAATCTTTTTGTTACATATAGAAATAAATAAGATCTCTTCTGTTTAACTGTTGAAAAATGAATTTGTTTCTGCTGAAACTCATTTCAGTCTGTTGCATGAATCGGGTCTTGTCAATTTAACTGACGTGATGTCGAGGGTGCATTCCTCCTATGGCATCTGAAAGATAAAATGAGGAATATTTTTCTTGTTTGCCAATGCAAGTATTTGTGTGGATGGCAGTTTACTGTGTGTTTCTTTCCTAAATATTTATGCAATTTCTAACATTGAAGGACGGAGGCTCAATGGTGAATTATAGGTTTGGGGAAAAGTCTCTTTTGACAAAGAACTTGAGGAGTGGAATCATTTTTTCCTCAAACTTTTGCTCGTACTAGGTTAGGCTTTGAGAGAACAAATGGTTTGGAACTCTAGGAGAAGTGAGGCCTTTTCTTTTTGTTCTTTCTTTCTTGCAAGTCGTACACTTTCAAGCTCAACTCCAAGTGTTCCAAATTGTGTTCCTGTAAAGTCCCATATCGGTTGGAAAGGATAACGAAACATTCCTTATAAGGGTGTGAAAACTTCTCCCTAATAGACGTGTTTTAAAACCTTGAGGGGGAAGCCCAGAAGGGAAGCTCAAAGAGGATAATATTTGCTAGCGGTGGGATTGGGCTGTTACAGTTCTGCAATTAACTAAGCTCATTTGGGCGACAAGTTTAGGAAAAAGAGTGTTCTATATACATTTGGTTCTTGATAGATAGAATGCAGAGAACTCCCTTCTTATTTCTCCTTGTGATTATGCTACTTAAGGTGGAACTATCGAAATCACTTATGAAAATCTTTGGTCTATTCTTTTTGTCCAAAAGATCGTCCTAGCATATTGTCCTCCCACTATCTGTTCTTAGAATTGCACCTAGGCTCTCCAAGCTCGCTCGGGCTCACATAGGCTCTAAAGCACTTAAATACACTTTGCATTAATTTTTTTTCCATCGTTACCTTGTTTTTCTCCTTATACTTTGTCAATTAATGAAAATTTATCTATTATTTTTAAAATGGAAAATTTATGCCCAAGAAAAATCTCATAGTTGGCAATCAACTTTGCTTATAGAATCTATTTTTACAAGCATATATTATGTATTTCACTTAATCAAGCTTTATGTTTGCAGCACCTTAAGCTTAAAACTCTATAGAGAACGCCTTATACGTAAGTGTGAAGCATTTTACTCTAGATTTCCGCACTGCAAGACCCTTTCTACTGCATTTAAATATCATTTCAGATGTCTCCAAATTTTCTCATAATGAAGGGAATAGTTGAACAAGAAAATAAATATTTACATTAAGAGAGATACAATAAAAATAATAGATAAAAAGATTCAGTAAAAGGGTTGTCTAGAGGGATAGATAATTTTCCTATGAGATTGGGGTATGTGATTTGTGCAAGATAAGCCAATCAGCTATGGCTCTGAAGTAATTATCAATATTCTTCTGAAACAATTGTTTAATGCTTTATTAATCTTCGTTTGAATGTAAATCCAACTCTTTATGTCACCTTTTTTCTTTTTAGGTACTACAGGGTATGCTTGTAAGGATAAATGCAGGGAACGCCTGCATTTGTGGCAAGTGTTCTTCAGCAGTCCACATGAATGGTGGGATAACAGAAACCAAAAGCCAAATCCGAATCATCCGGACTTTAAACACAAGAGTACTGGCGAGGTCCTGTGGCTGCGGGCAACGGACCCTCCATGGATCGGAAAACAGCTCGAATTACTCGACACCAAGATGGTAAAAAAAGATGAAGATGATCATTTTGGTTCTGATTCTAGCATGTCCAAGTGGTTATGTAGCTGAAGAAGCCTTCTTGCAGCCGAGGTATCGTGTGCTTTCCTCATTGCTTCTTCTGCTTGAACAATATTTAAATGAGCCCAAAATCTGTTTCATAGATAGATTGTCACAGTCCAAATAGGAACATTGAAGGAGGAAAGTCGAAACATTAGTTTGTATATATGTAATGTTCGTAGTGTAAGGTCGACAAAGCG

mRNA sequence

AAAAGGTCCACTGGAAAAGCAAACGTGCTCGTCGGAAAAATGCGCCAAGTTCTCCTTCGAAAGTACCGGGAAACTCAGCCGAGAAAACTGGACTGATCGCCGTCAAGGTCGCCGTCGACGTCCTCCGCACAATCGTCCGATGGCTATGAGGGCCTTTCGCCATCTACTTCCTCTTAGACAAGTAACTGTATCGCCTTTGCCGCCGGTAGCGTTCTTCTCTTCGTTTTCGTCAGTAAGCACTAAATCGACGAACTGCGTCGCCACTGATGCCAGTGGCGGAGGTTTGGTGCACAGAAATCGTCTAAAATTTAAGTGGAACTCGGCTAAGTTCGTTGGTACGGTGGAACAGCCGCTTAAAGTGCATACCAGGAATGGCGACACAGTTTATGCTTGGACATTTCTTCGAGCTAAAGTCTCCCCTGATTCTAACAGCAGTTCTAGGATTTTGCTGAAACTGTGGGAAGAAATGGCTGAATCATACATTGAACGTCTTAAACCGAATGACTTCATTTATGTTGCTGGTACTTTAGAGTCTTATAAGAAGGCTGATAAGTGCGGGAAGTCTTTTTTATCTTATGAGTTAACTGTGTCAGAGTTGAATCACATTCGACAAAATGCTCGAGGCTCAAAAAGTCAAGATTCTCTGGGCATGATACATGAAGAGGGTACTACAGGGTATGCTTGTAAGGATAAATGCAGGGAACGCCTGCATTTGTGGCAAGTGTTCTTCAGCAGTCCACATGAATGGTGGGATAACAGAAACCAAAAGCCAAATCCGAATCATCCGGACTTTAAACACAAGAGTACTGGCGAGGTCCTGTGGCTGCGGGCAACGGACCCTCCATGGATCGGAAAACAGCTCGAATTACTCGACACCAAGATGGTAAAAAAAGATGAAGATGATCATTTTGGTTCTGATTCTAGCATGTCCAAGTGGTTATGTAGCTGAAGAAGCCTTCTTGCAGCCGAGGTATCGTGTGCTTTCCTCATTGCTTCTTCTGCTTGAACAATATTTAAATGAGCCCAAAATCTGTTTCATAGATAGATTGTCACAGTCCAAATAGGAACATTGAAGGAGGAAAGTCGAAACATTAGTTTGTATATATGTAATGTTCGTAGTGTAAGGTCGACAAAGCG

Coding sequence (CDS)

ATGGCTATGAGGGCCTTTCGCCATCTACTTCCTCTTAGACAAGTAACTGTATCGCCTTTGCCGCCGGTAGCGTTCTTCTCTTCGTTTTCGTCAGTAAGCACTAAATCGACGAACTGCGTCGCCACTGATGCCAGTGGCGGAGGTTTGGTGCACAGAAATCGTCTAAAATTTAAGTGGAACTCGGCTAAGTTCGTTGGTACGGTGGAACAGCCGCTTAAAGTGCATACCAGGAATGGCGACACAGTTTATGCTTGGACATTTCTTCGAGCTAAAGTCTCCCCTGATTCTAACAGCAGTTCTAGGATTTTGCTGAAACTGTGGGAAGAAATGGCTGAATCATACATTGAACGTCTTAAACCGAATGACTTCATTTATGTTGCTGGTACTTTAGAGTCTTATAAGAAGGCTGATAAGTGCGGGAAGTCTTTTTTATCTTATGAGTTAACTGTGTCAGAGTTGAATCACATTCGACAAAATGCTCGAGGCTCAAAAAGTCAAGATTCTCTGGGCATGATACATGAAGAGGGTACTACAGGGTATGCTTGTAAGGATAAATGCAGGGAACGCCTGCATTTGTGGCAAGTGTTCTTCAGCAGTCCACATGAATGGTGGGATAACAGAAACCAAAAGCCAAATCCGAATCATCCGGACTTTAAACACAAGAGTACTGGCGAGGTCCTGTGGCTGCGGGCAACGGACCCTCCATGGATCGGAAAACAGCTCGAATTACTCGACACCAAGATGGTAAAAAAAGATGAAGATGATCATTTTGGTTCTGATTCTAGCATGTCCAAGTGGTTATGTAGCTGA

Protein sequence

MAMRAFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWNSAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKPNDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGYACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQLELLDTKMVKKDEDDHFGSDSSMSKWLCS

Homology

[Close]

BLAST of Carg25845 vs. NCBI nr
Match: KAG7020550.1 (Protein OSB1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 563.1 bits (1450), Expect = 1.3e-156
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MAMRAFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWN 60
           MAMRAFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWN
Sbjct: 1   MAMRAFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWN 60

Query: 61  SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKP 120
           SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKP
Sbjct: 61  SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKP 120

Query: 121 NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGY 180
           NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGY
Sbjct: 121 NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGY 180

Query: 181 ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ 240
           ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ
Sbjct: 181 ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ 240

Query: 241 LELLDTKMVKKDEDDHFGSDSSMSKWLCS 270
           LELLDTKMVKKDEDDHFGSDSSMSKWLCS
Sbjct: 241 LELLDTKMVKKDEDDHFGSDSSMSKWLCS 269

[Close]

BLAST of Carg25845 vs. NCBI nr
Match: XP_022951824.1 (protein OSB1, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 555.1 bits (1429), Expect = 3.4e-154
Identity = 266/269 (98.88%), Postives = 266/269 (98.88%), Query Frame = 0


Query: 1   MAMRAFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWN 60
           MAMRAFRHLL LRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDAS GG VHRNRLKFKWN
Sbjct: 1   MAMRAFRHLLALRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASDGGSVHRNRLKFKWN 60

Query: 61  SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKP 120
           SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKP
Sbjct: 61  SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKP 120

Query: 121 NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGY 180
           NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGY
Sbjct: 121 NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGY 180

Query: 181 ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ 240
           ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ
Sbjct: 181 ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ 240

Query: 241 LELLDTKMVKKDEDDHFGSDSSMSKWLCS 270
           LELLDTKMVKKDEDDHFGSDSSMSKWLCS
Sbjct: 241 LELLDTKMVKKDEDDHFGSDSSMSKWLCS 269

[Close]

BLAST of Carg25845 vs. NCBI nr
Match: XP_023536822.1 (protein OSB1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 543.5 bits (1399), Expect = 1.0e-150
Identity = 262/269 (97.40%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MAMRAFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWN 60
           MAMRAFR LLP RQVTVSPLP VAFFSSFSSVSTKSTNCVATDAS GGLV RNRLKFKWN
Sbjct: 1   MAMRAFRLLLPHRQVTVSPLPLVAFFSSFSSVSTKSTNCVATDASDGGLVRRNRLKFKWN 60

Query: 61  SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKP 120
           SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSN SSRILLKLWEEMAESYIERLKP
Sbjct: 61  SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNRSSRILLKLWEEMAESYIERLKP 120

Query: 121 NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGY 180
           NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDS+GMIHEEGTTGY
Sbjct: 121 NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSVGMIHEEGTTGY 180

Query: 181 ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ 240
           ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ
Sbjct: 181 ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ 240

Query: 241 LELLDTKMVKKDEDDHFGSDSSMSKWLCS 270
           LELLDTKMVKKDEDDHFGSDSSMSKWLCS
Sbjct: 241 LELLDTKMVKKDEDDHFGSDSSMSKWLCS 269

[Close]

BLAST of Carg25845 vs. NCBI nr
Match: XP_023002011.1 (protein OSB1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 527.3 bits (1357), Expect = 7.6e-146
Identity = 254/269 (94.42%), Postives = 259/269 (96.28%), Query Frame = 0


Query: 1   MAMRAFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWN 60
           M MRA R LLPLRQVTVSPLP VAFFSSFSSVSTKSTNCVATDAS GGLVHRN LKFKWN
Sbjct: 1   MTMRAVRLLLPLRQVTVSPLPLVAFFSSFSSVSTKSTNCVATDASDGGLVHRNCLKFKWN 60

Query: 61  SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKP 120
           +AKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVS DS+SS RILLKLWEEMAESYIERLKP
Sbjct: 61  AAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSRDSSSSFRILLKLWEEMAESYIERLKP 120

Query: 121 NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGY 180
           NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDS+GMIHEEGTTGY
Sbjct: 121 NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSVGMIHEEGTTGY 180

Query: 181 ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ 240
           ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNP HPDFKHKSTGEVLWLRATDPPWIGKQ
Sbjct: 181 ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPKHPDFKHKSTGEVLWLRATDPPWIGKQ 240

Query: 241 LELLDTKMVKKDEDDHFGSDSSMSKWLCS 270
           LELLDTKM KKDEDDHFGSDSS++KWLCS
Sbjct: 241 LELLDTKMGKKDEDDHFGSDSSIAKWLCS 269

[Close]

BLAST of Carg25845 vs. NCBI nr
Match: KAG6585639.1 (Protein NRT1/ PTR FAMILY 4.5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 518.5 bits (1334), Expect = 3.5e-143
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MAMRAFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWN 60
           MAMRAFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWN
Sbjct: 1   MAMRAFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWN 60

Query: 61  SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKP 120
           SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKP
Sbjct: 61  SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKP 120

Query: 121 NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGY 180
           NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGY
Sbjct: 121 NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGY 180

Query: 181 ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ 240
           ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ
Sbjct: 181 ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ 240

Query: 241 LELLDTKM 249
           LELLDTKM
Sbjct: 241 LELLDTKM 248

[Close]

BLAST of Carg25845 vs. ExPASy Swiss-Prot
Match: Q9SX99 (Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.7e-35
Identity = 83/204 (40.69%), Postives = 118/204 (57.84%), Query Frame = 0


Query: 54  RLKFKW-NSAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAE 113
           +LKF   NS   +G V++ ++V     D    +T LR K   + N S RI L++W+ MA 
Sbjct: 49  KLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLRMWDAMAR 108

Query: 114 SYIERLKPNDFIYVAGTLESYKK--ADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLG 173
           + I  LK ND I V+G LESY K  +D      L Y++ V+E+N++   A  S   DS  
Sbjct: 109 TCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYVA--APPSHVLDSQI 168

Query: 174 MIHEEGTTGYACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLR 233
             + +  T    ++  ++ ++LWQVFFS+P++WWDNR  K NP  PDFKHK TGE LWL 
Sbjct: 169 SKNPKTKTEDDIEESKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKHKDTGEALWLC 228

Query: 234 ATDPPWIGKQLELLDTKMVKKDED 255
           +  P WI ++LEL D K    DE+
Sbjct: 229 SDLPDWITRRLELFDQKNRFYDEE 250

[Close]

BLAST of Carg25845 vs. ExPASy Swiss-Prot
Match: Q8GWJ4 (Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB3 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.6e-08
Identity = 24/49 (48.98%), Postives = 30/49 (61.22%), Query Frame = 0


Query: 188 ERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPW 237
           +R  +W+    +P +WWDNR  K NP  PDFKHK TGE LW+    P W
Sbjct: 375 KREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWI-GDSPTW 422

[Close]

BLAST of Carg25845 vs. ExPASy Swiss-Prot
Match: Q8GXH3 (Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-07
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0


Query: 193 WQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWI 238
           W+    +P +WWDNR  K N   PDFKHK TGE LWL  + P W+
Sbjct: 312 WKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-PTWV 355

[Close]

BLAST of Carg25845 vs. ExPASy Swiss-Prot
Match: Q9FYJ2 (Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.5e-06
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 0


Query: 180 YACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGK 239
           YA + K  E    W+    + ++WWDNR  K  P  PDFKHK TG  LWL +  P W+ +
Sbjct: 285 YAKQPKAGE--ESWKDLVDNMNKWWDNRVDKRTPKSPDFKHKETGVGLWL-SDSPSWVLE 343

Query: 240 QL 242
           +L
Sbjct: 345 KL 343

[Close]

BLAST of Carg25845 vs. ExPASy TrEMBL
Match: A0A6J1GJW3 (protein OSB1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454556 PE=4 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 1.6e-154
Identity = 266/269 (98.88%), Postives = 266/269 (98.88%), Query Frame = 0


Query: 1   MAMRAFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWN 60
           MAMRAFRHLL LRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDAS GG VHRNRLKFKWN
Sbjct: 1   MAMRAFRHLLALRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASDGGSVHRNRLKFKWN 60

Query: 61  SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKP 120
           SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKP
Sbjct: 61  SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKP 120

Query: 121 NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGY 180
           NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGY
Sbjct: 121 NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGY 180

Query: 181 ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ 240
           ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ
Sbjct: 181 ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ 240

Query: 241 LELLDTKMVKKDEDDHFGSDSSMSKWLCS 270
           LELLDTKMVKKDEDDHFGSDSSMSKWLCS
Sbjct: 241 LELLDTKMVKKDEDDHFGSDSSMSKWLCS 269

[Close]

BLAST of Carg25845 vs. ExPASy TrEMBL
Match: A0A6J1KK72 (protein OSB1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496022 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 3.7e-146
Identity = 254/269 (94.42%), Postives = 259/269 (96.28%), Query Frame = 0


Query: 1   MAMRAFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWN 60
           M MRA R LLPLRQVTVSPLP VAFFSSFSSVSTKSTNCVATDAS GGLVHRN LKFKWN
Sbjct: 1   MTMRAVRLLLPLRQVTVSPLPLVAFFSSFSSVSTKSTNCVATDASDGGLVHRNCLKFKWN 60

Query: 61  SAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKP 120
           +AKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVS DS+SS RILLKLWEEMAESYIERLKP
Sbjct: 61  AAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSRDSSSSFRILLKLWEEMAESYIERLKP 120

Query: 121 NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGY 180
           NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDS+GMIHEEGTTGY
Sbjct: 121 NDFIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSVGMIHEEGTTGY 180

Query: 181 ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQ 240
           ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNP HPDFKHKSTGEVLWLRATDPPWIGKQ
Sbjct: 181 ACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPKHPDFKHKSTGEVLWLRATDPPWIGKQ 240

Query: 241 LELLDTKMVKKDEDDHFGSDSSMSKWLCS 270
           LELLDTKM KKDEDDHFGSDSS++KWLCS
Sbjct: 241 LELLDTKMGKKDEDDHFGSDSSIAKWLCS 269

[Close]

BLAST of Carg25845 vs. ExPASy TrEMBL
Match: A0A6J1CSS2 (protein OSB1, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111013985 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.7e-106
Identity = 196/267 (73.41%), Postives = 217/267 (81.27%), Query Frame = 0


Query: 3   MRAFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWNSA 62
           MRA R L PLRQV  SPLPPVAFFS  + + TKSTNC ATDA+    V RNR KFKWNSA
Sbjct: 1   MRAVRLLYPLRQVAASPLPPVAFFSG-AVIDTKSTNCAATDANTESPVRRNRPKFKWNSA 60

Query: 63  KFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKPND 122
            FVGTVEQPL+V+TRNG T+ AWTFLRAKVSPDSNSS R+ LKLWEEMAES +ERLKPND
Sbjct: 61  SFVGTVEQPLRVNTRNGKTLSAWTFLRAKVSPDSNSSFRVFLKLWEEMAESNLERLKPND 120

Query: 123 FIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGYAC 182
           FIYVAGTLESYKK +KCGKS+L YELTVSELN+I+Q  +GSKSQ+  G+ HEEG      
Sbjct: 121 FIYVAGTLESYKKDNKCGKSYLCYELTVSELNYIKQYDQGSKSQNDEGVRHEEGDP---- 180

Query: 183 KDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQLE 242
           + K RERLHLWQVFF SP+EWWDNRN K N  HPDF+HKSTGE LWL+ATDPPWI KQLE
Sbjct: 181 RKKYRERLHLWQVFFGSPYEWWDNRNHKSNSKHPDFRHKSTGEALWLQATDPPWIRKQLE 240

Query: 243 LLDTKMVKKDEDDHFGSDSSMSKWLCS 270
            LD KM +KD+  HFGSDSSMSKWL S
Sbjct: 241 FLDGKMEEKDQHCHFGSDSSMSKWLYS 262

[Close]

BLAST of Carg25845 vs. ExPASy TrEMBL
Match: A0A0A0LNI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360660 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 6.6e-95
Identity = 181/264 (68.56%), Postives = 205/264 (77.65%), Query Frame = 0


Query: 3   MRAFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWNSA 62
           M+A R L  LR VT  P P VA FSS SS+ TKS N VAT+A   G V+ ++ KFKW SA
Sbjct: 1   MKAVRLLFSLRPVTTLPSPSVALFSSSSSLITKSMNSVATEAKKQGSVYEHQPKFKWKSA 60

Query: 63  KFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKPND 122
            F GTVE+PLKV TRN  TV AWT LRAK SPDS+SS RI LKL +EMAES+IERLKPND
Sbjct: 61  NFFGTVERPLKVTTRNCRTVRAWTILRAKASPDSSSSFRIFLKLEKEMAESWIERLKPND 120

Query: 123 FIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGYAC 182
           ++ VAG LESYKK  K GKS+LSY+LTVSELN I  N +GSKSQ+S+GM+HEE   G+ C
Sbjct: 121 YVNVAGPLESYKKVGKSGKSYLSYQLTVSELNCIAHNDQGSKSQNSVGMLHEE---GHDC 180

Query: 183 KDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQLE 242
           +   RERL+LWQVFFSSPHEWWDNRN+K NPN PDF HKSTGE LWLR+TDPPWI KQLE
Sbjct: 181 RSSYRERLYLWQVFFSSPHEWWDNRNKKSNPNGPDFSHKSTGEALWLRSTDPPWIRKQLE 240

Query: 243 LLDTKMVKKDEDDHFGSDSSMSKW 267
           LLDT+M KKD D H  SDSSMS W
Sbjct: 241 LLDTQMKKKDGDGHLVSDSSMSNW 261

[Close]

BLAST of Carg25845 vs. ExPASy TrEMBL
Match: A0A5A7VHQ1 (Protein OSB1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006260 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.5e-94
Identity = 182/265 (68.68%), Postives = 204/265 (76.98%), Query Frame = 0


Query: 3   MRAFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWNSA 62
           M+A R L  LR VT SP P VA FSS SS++TKS N VAT+A   G V++N+ KF W SA
Sbjct: 1   MKAVRLLFSLRPVTTSPSPSVALFSSSSSLTTKSMNSVATEAKKQGSVYKNQPKFTWKSA 60

Query: 63  KFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKPND 122
            F GTVE+PLKV T N  TV AWT LRAKVSPDSNSS RI L+L +EMAES+IERLKPND
Sbjct: 61  NFYGTVERPLKVITWNCRTVMAWTILRAKVSPDSNSSFRIFLRLQKEMAESWIERLKPND 120

Query: 123 FIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGYAC 182
           +IYVAGTLESYK A K G S LSY LTVSELN I +N +GSKSQ+S+GM+HEEG     C
Sbjct: 121 YIYVAGTLESYKNAAKSGTSSLSYRLTVSELNCITRNDQGSKSQNSVGMLHEEGRD---C 180

Query: 183 KDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQLE 242
           +    ERL+LWQVFFSSPHEWWDNRN+K NPN PDF HKST E LWLR TDPPWI KQL+
Sbjct: 181 RSSYVERLYLWQVFFSSPHEWWDNRNKKSNPNGPDFTHKSTNEALWLRPTDPPWIKKQLK 240

Query: 243 LLDTKMVKKDEDDHFGSDSSMSKWL 268
           LLDTKM KKD D H  SDSSMS W+
Sbjct: 241 LLDTKMRKKDHDGHLVSDSSMSSWI 262

[Close]

BLAST of Carg25845 vs. TAIR 10
Match: AT1G47720.1 (Primosome PriB/single-strand DNA-binding )

HSP 1 Score: 149.4 bits (376), Expect = 4.0e-36
Identity = 83/204 (40.69%), Postives = 118/204 (57.84%), Query Frame = 0


Query: 54  RLKFKW-NSAKFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAE 113
           +LKF   NS   +G V++ ++V     D    +T LR K   + N S RI L++W+ MA 
Sbjct: 49  KLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLRMWDAMAR 108

Query: 114 SYIERLKPNDFIYVAGTLESYKK--ADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLG 173
           + I  LK ND I V+G LESY K  +D      L Y++ V+E+N++   A  S   DS  
Sbjct: 109 TCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYVA--APPSHVLDSQI 168

Query: 174 MIHEEGTTGYACKDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLR 233
             + +  T    ++  ++ ++LWQVFFS+P++WWDNR  K NP  PDFKHK TGE LWL 
Sbjct: 169 SKNPKTKTEDDIEESKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKHKDTGEALWLC 228

Query: 234 ATDPPWIGKQLELLDTKMVKKDED 255
           +  P WI ++LEL D K    DE+
Sbjct: 229 SDLPDWITRRLELFDQKNRFYDEE 250

[Close]

BLAST of Carg25845 vs. TAIR 10
Match: AT5G44785.2 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09
Identity = 24/49 (48.98%), Postives = 30/49 (61.22%), Query Frame = 0


Query: 188 ERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPW 237
           +R  +W+    +P +WWDNR  K NP  PDFKHK TGE LW+    P W
Sbjct: 377 KREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWI-GDSPTW 424

[Close]

BLAST of Carg25845 vs. TAIR 10
Match: AT5G44785.1 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09
Identity = 24/49 (48.98%), Postives = 30/49 (61.22%), Query Frame = 0


Query: 188 ERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPW 237
           +R  +W+    +P +WWDNR  K NP  PDFKHK TGE LW+    P W
Sbjct: 375 KREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWI-GDSPTW 422

[Close]

BLAST of Carg25845 vs. TAIR 10
Match: AT4G20010.1 (plastid transcriptionally active 9 )

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-08
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0


Query: 193 WQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWI 238
           W+    +P +WWDNR  K N   PDFKHK TGE LWL  + P W+
Sbjct: 312 WKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-PTWV 355

[Close]

BLAST of Carg25845 vs. TAIR 10
Match: AT4G20010.2 (plastid transcriptionally active 9 )

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-08
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0


Query: 193 WQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWI 238
           W+    +P +WWDNR  K N   PDFKHK TGE LWL  + P W+
Sbjct: 312 WKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-PTWV 355

The following BLAST results are available for this feature:

BLAST of Carg25845 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020550.1	1.3e-156	100.00	Protein OSB1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022951824.1	3.4e-154	98.88	protein OSB1, mitochondrial-like [Cucurbita moschata]	[more]
XP_023536822.1	1.0e-150	97.40	protein OSB1, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]
XP_023002011.1	7.6e-146	94.42	protein OSB1, mitochondrial-like [Cucurbita maxima]	[more]
KAG6585639.1	3.5e-143	100.00	Protein NRT1/ PTR FAMILY 4.5, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Carg25845 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX99	5.7e-35	40.69	Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1	[more]
Q8GWJ4	2.6e-08	48.98	Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB...	[more]
Q8GXH3	1.7e-07	51.11	Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2	[more]
Q9FYJ2	2.5e-06	41.94	Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1	[more]

BLAST of Carg25845 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJW3	1.6e-154	98.88	protein OSB1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454556 P...	[more]
A0A6J1KK72	3.7e-146	94.42	protein OSB1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496022 PE=...	[more]
A0A6J1CSS2	3.7e-106	73.41	protein OSB1, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111013985 ...	[more]
A0A0A0LNI3	6.6e-95	68.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360660 PE=4 SV=1	[more]
A0A5A7VHQ1	2.5e-94	68.68	Protein OSB1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006260 P...	[more]

BLAST of Carg25845 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47720.1	4.0e-36	40.69	Primosome PriB/single-strand DNA-binding	[more]
AT5G44785.2	1.9e-09	48.98	organellar single-stranded DNA binding protein 3	[more]
AT5G44785.1	1.9e-09	48.98	organellar single-stranded DNA binding protein 3	[more]
AT4G20010.1	1.2e-08	51.11	plastid transcriptionally active 9	[more]
AT4G20010.2	1.2e-08	51.11	plastid transcriptionally active 9	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.140		coord: 53..156 e-value: 3.2E-6 score: 28.8
None	No IPR available	PANTHER	PTHR10302:SF18	PROTEIN OSB1, MITOCHONDRIAL	coord: 3..266
IPR000424	Primosome PriB/single-strand DNA-binding	PFAM	PF00436	SSB	coord: 65..154 e-value: 1.3E-4 score: 22.0
IPR000424	Primosome PriB/single-strand DNA-binding	PROSITE	PS50935	SSB	coord: 59..157 score: 10.499756
IPR011344	Single-stranded DNA-binding protein	PANTHER	PTHR10302	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 3..266
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 60..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25845-RA	Carg25845-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006264	mitochondrial DNA replication
biological_process	GO:0051096	positive regulation of helicase activity
biological_process	GO:0006260	DNA replication
cellular_component	GO:0042645	mitochondrial nucleoid
molecular_function	GO:0003697	single-stranded DNA binding