Carg25801 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25801
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	60S ribosomal protein L4
Location	Carg_Chr07: 5127043 .. 5129401 (-)
RNA-Seq Expression	Carg25801
Synteny	Carg25801

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTTGCCGCCGCTCGCCCTCTTGTTTCGGTTCAGTCCCTTGAAGGGGACATGGCCACTGATGCGGCACCCGGCGTCCCGCTGCCCGACGTGATGAGGGCTTCAATTCGGCCGGATATTGTTAGCTTTGTTCATTCCAATATCTCAAAGAACAGCCGCCAGCCCTACGCCGTCAGCAAGCGCGCCGGCCACCAAACCTCCGCTGAGTCCTGGGGTACCGGACGTGCTGTGTCCCGTATTCCTCGTGTCCCTGGCGGTGGTACTCACCGTGCTGGTCAGGGTGCTTTTGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCAACTAAGATCTGGCGACGTTGGCACCGAAAGATCAATGTGAATCAGAAGAGGTATGCTGTTGTTTCGGCTATTGCGGCCTCGGCTGTTCCATCGTTGGTTCTTGCTCGCGGCCATCGTATCGAGTCTGTTCCTGAATTGCCTCTTGTTGTGAGCGACTCGGCCGAAGGCGTTGAGAAGACCTCCGCTGCAATCAAGGTTCTCAAACAGGTTGGTGCTTTTCCCGATGCTGAGAAGGCCAAGGATAGCCATGCGATCCGTCCTGGTAAGGGTAAAATGAGGAACCGTCGCTACATTTCTCGCAAGGGTCCGTTGATTGTTTACGGAACTGAGGGCGCTAAACTTGTTAAGGCCTTCCGTAACATTCCGGGAGTTGAGATTGCCAATGTTGAGAGGCTTAATTTGTTGAAGCTCGCTCCTGGTGGTCACCTTGGAAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATTTATGGATCTTTCGAGAAGCCTTCAGAGAAGAAAAAGGGTTATGTCCTCCCAAGGTCTAAGATGGTGAATGCAGATTTGTCAAGGATTATTAACTCTGATGAAGTCCAATCTGTGGTGAAGCCGATTAAGAAGGCTGTTAAGAGAGCTCCATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCGTATGCCAAGACTGCTAGAAGAATGGCTCTTTTGGCGGAGGAGCAACGTGTTAAGGCTAAAAAGGAGAAACTCGACAAGAAGAGGAATTTGACTACAAAGGTACATCATTCATGTTCTTAGTGATTATCTTCATTCTTTTAGAAATTAAGTTGCGCATATCTCCATAGCAGATTGATTGGATTGGCGATTTCCTTCAAATACTTATTAAGTTGATATTATTTTTTATGTGGGTTTGGTTTCGCTCTTAAGATTGATGGCATAATTAATTTAATTTTATGTTACATACAGTGGAATCTTTGTATCTGGCTCATAGTTATTGGGTCTGCTTAATGACATGCTTTTATGAAAATTATTGCTCTATGTTCAATCATGTCCTGTTGTCATTTAACTTCGATATGCATCGTTCTTGAGGACTACTGTTTACTCTCATCACTTATACTTCATAATTGATTAGATTGGTCGAATTCTTAAGTACACTTTTTTTATGTGCTCGCCTTATCCATCCTTGTAAGTTCAAGTAATCTCTTGTTGATTTGGTAGAGAACTAATTTATTTTATAGATTTCTTTGTTTCATCATGATGACAAGATGTTCGTTTTATCCTTCCAAAAGTTTGTCCTTTTTGGTTTCTCATTTTAAGTTGAATCATCGATACTCCGTGACCAGAAGTTGTTTTATACGGTGGCACAATCATATGATCATATCATCTGCATTTTGTGGAACCAGACTTTGTTGTCTCAGTACACATCCTATTCATGGTGTTGACTTTCTTCTCTCCATTTTTTGTACATGATCCTCACAGGAGGAGGCTACTTCAATCAAAGCTGCAGGCAAGGCATGGTATCAGACGATGATCTCCGACAGTGATTACACCGAGTTCGACAACTTCTCGAAATGGCTCGGCGTCTCTCAGTAATTTCGCTTTTCTTTATTCAAAATCTCATAGACCTCATTACTTCGGTAAATCTAGTTTTGTCAAGGAGTTGATATTTCTTGCTTGGATTGTTGTTGCGTTTAGAGTTTAGGAGAACAATGAGTGAAGTAACATGATAATTTACCTTTAGCCTTTTGCTCTCCCATTTTTATCTACATTCCTCCTCTTTGTTCATCTACAAGGAGTGTGTAGTAGTTGCCTTTTATCATGTCACCATGGTGAGATTACATCCACTGTGATATGCAATTCTTCTGCTTTTAATGGTCATTGTTCTTGATGCCCTTTTATTCAATGCCATATCATTTTTCCCCATTGGCTTTGCCTTAGAGCCTTGGAGTGATTAGTATTATGCAATTTCTAAAATTAAAATTGTTGGGGATTTGTTCTCCATCCTTGATTTTCAAATTTTATGAAAAAT

mRNA sequence

ATGGCTGTTGCCGCCGCTCGCCCTCTTGTTTCGGTTCAGTCCCTTGAAGGGGACATGGCCACTGATGCGGCACCCGGCGTCCCGCTGCCCGACGTGATGAGGGCTTCAATTCGGCCGGATATTGTTAGCTTTGTTCATTCCAATATCTCAAAGAACAGCCGCCAGCCCTACGCCGTCAGCAAGCGCGCCGGCCACCAAACCTCCGCTGAGTCCTGGGGTACCGGACGTGCTGTGTCCCGTATTCCTCGTGTCCCTGGCGGTGGTACTCACCGTGCTGGTCAGGGTGCTTTTGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCAACTAAGATCTGGCGACGTTGGCACCGAAAGATCAATGTGAATCAGAAGAGGTATGCTGTTGTTTCGGCTATTGCGGCCTCGGCTGTTCCATCGTTGGTTCTTGCTCGCGGCCATCGTATCGAGTCTGTTCCTGAATTGCCTCTTGTTGTGAGCGACTCGGCCGAAGGCGTTGAGAAGACCTCCGCTGCAATCAAGGTTCTCAAACAGGTTGGTGCTTTTCCCGATGCTGAGAAGGCCAAGGATAGCCATGCGATCCGTCCTGGTAAGGGTAAAATGAGGAACCGTCGCTACATTTCTCGCAAGGGTCCGTTGATTGTTTACGGAACTGAGGGCGCTAAACTTGTTAAGGCCTTCCGTAACATTCCGGGAGTTGAGATTGCCAATGTTGAGAGGCTTAATTTGTTGAAGCTCGCTCCTGGTGGTCACCTTGGAAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATTTATGGATCTTTCGAGAAGCCTTCAGAGAAGAAAAAGGGTTATGTCCTCCCAAGGTCTAAGATGGTGAATGCAGATTTGTCAAGGATTATTAACTCTGATGAAGTCCAATCTGTGGTGAAGCCGATTAAGAAGGCTGTTAAGAGAGCTCCATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCGAGGAGGCTACTTCAATCAAAGCTGCAGGCAAGGCATGGTATCAGACGATGATCTCCGACAGTGATTACACCGAGTTCGACAACTTCTCGAAATGGCTCGGCGTCTCTCAGTAATTTCGCTTTTCTTTATTCAAAATCTCATAGACCTCATTACTTCGGTAAATCTAGTTTTGTCAAGGAGTTGATATTTCTTGCTTGGATTGTTGTTGCGTTTAGAGTTTAGGAGAACAATGAGTGAAGTAACATGATAATTTACCTTTAGCCTTTTGCTCTCCCATTTTTATCTACATTCCTCCTCTTTGTTCATCTACAAGGAGTGTGTAGTAGTTGCCTTTTATCATGTCACCATGGTGAGATTACATCCACTGTGATATGCAATTCTTCTGCTTTTAATGGTCATTGTTCTTGATGCCCTTTTATTCAATGCCATATCATTTTTCCCCATTGGCTTTGCCTTAGAGCCTTGGAGTGATTAGTATTATGCAATTTCTAAAATTAAAATTGTTGGGGATTTGTTCTCCATCCTTGATTTTCAAATTTTATGAAAAAT

Coding sequence (CDS)

ATGGCTGTTGCCGCCGCTCGCCCTCTTGTTTCGGTTCAGTCCCTTGAAGGGGACATGGCCACTGATGCGGCACCCGGCGTCCCGCTGCCCGACGTGATGAGGGCTTCAATTCGGCCGGATATTGTTAGCTTTGTTCATTCCAATATCTCAAAGAACAGCCGCCAGCCCTACGCCGTCAGCAAGCGCGCCGGCCACCAAACCTCCGCTGAGTCCTGGGGTACCGGACGTGCTGTGTCCCGTATTCCTCGTGTCCCTGGCGGTGGTACTCACCGTGCTGGTCAGGGTGCTTTTGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCAACTAAGATCTGGCGACGTTGGCACCGAAAGATCAATGTGAATCAGAAGAGGTATGCTGTTGTTTCGGCTATTGCGGCCTCGGCTGTTCCATCGTTGGTTCTTGCTCGCGGCCATCGTATCGAGTCTGTTCCTGAATTGCCTCTTGTTGTGAGCGACTCGGCCGAAGGCGTTGAGAAGACCTCCGCTGCAATCAAGGTTCTCAAACAGGTTGGTGCTTTTCCCGATGCTGAGAAGGCCAAGGATAGCCATGCGATCCGTCCTGGTAAGGGTAAAATGAGGAACCGTCGCTACATTTCTCGCAAGGGTCCGTTGATTGTTTACGGAACTGAGGGCGCTAAACTTGTTAAGGCCTTCCGTAACATTCCGGGAGTTGAGATTGCCAATGTTGAGAGGCTTAATTTGTTGAAGCTCGCTCCTGGTGGTCACCTTGGAAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATTTATGGATCTTTCGAGAAGCCTTCAGAGAAGAAAAAGGGTTATGTCCTCCCAAGGTCTAAGATGGTGAATGCAGATTTGTCAAGGATTATTAACTCTGATGAAGTCCAATCTGTGGTGAAGCCGATTAAGAAGGCTGTTAAGAGAGCTCCATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCGAGGAGGCTACTTCAATCAAAGCTGCAGGCAAGGCATGGTATCAGACGATGA

Protein sequence

MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPRRLLQSKLQARHGIRR

Homology

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BLAST of Carg25801 vs. NCBI nr
Match: KAG7027280.1 (60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 677.6 bits (1747), Expect = 6.0e-191
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60
           MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS
Sbjct: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPRRLLQSKLQARHGIRR 353
           SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPRRLLQSKLQARHGIRR
Sbjct: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPRRLLQSKLQARHGIRR 352

[Close]

BLAST of Carg25801 vs. NCBI nr
Match: XP_022963036.1 (60S ribosomal protein L4 [Cucurbita moschata])

HSP 1 Score: 650.2 bits (1676), Expect = 1.0e-182
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60
           MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS
Sbjct: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP
Sbjct: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 336

[Close]

BLAST of Carg25801 vs. NCBI nr
Match: XP_022972645.1 (60S ribosomal protein L4-like [Cucurbita maxima] >XP_023517997.1 60S ribosomal protein L4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 649.0 bits (1673), Expect = 2.3e-182
Identity = 335/336 (99.70%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60
           MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVM+ASIRPDIVSFVHSNISKNSRQPYAVS
Sbjct: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP
Sbjct: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 336

[Close]

BLAST of Carg25801 vs. NCBI nr
Match: KAG6595268.1 (60S ribosomal protein L4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 649.0 bits (1673), Expect = 2.3e-182
Identity = 335/336 (99.70%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60
           MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVM+ASIRPDIVSFVHSNISKNSRQPYAVS
Sbjct: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP
Sbjct: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 336

[Close]

BLAST of Carg25801 vs. NCBI nr
Match: XP_022925909.1 (60S ribosomal protein L4 [Cucurbita moschata] >XP_023544338.1 60S ribosomal protein L4 [Cucurbita pepo subsp. pepo] >KAG6604443.1 60S ribosomal protein L4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034587.1 60S ribosomal protein L4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 636.0 bits (1639), Expect = 2.0e-178
Identity = 327/333 (98.20%), Postives = 330/333 (99.10%), Query Frame = 0


Query: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVSKRA 63
           AAARPLVSVQSLEGDMATDA P VPLPDVM+ASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 3   AAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62

Query: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAA+KVLKQVGAFP
Sbjct: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAFP 182

Query: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243
           DAEKAKDSH+IRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 183 DAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242

Query: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302

Query: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           VQSVVKPIKK VKRAPLKKNPLKNLNAMLKLNP
Sbjct: 303 VQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNP 335

[Close]

BLAST of Carg25801 vs. ExPASy Swiss-Prot
Match: Q9XF97 (60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 2.8e-167
Identity = 299/335 (89.25%), Postives = 319/335 (95.22%), Query Frame = 0


Query: 2   AVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVSK 61
           A AAARPLV+VQSLEGDMATD    V LPDVM+ASIRPDIV+FVHSNISKNSRQPYAVSK
Sbjct: 4   AAAAARPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSK 63

Query: 62  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 121
           +AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 64  KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 123

Query: 122 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 181
           VNQKRYAVVSAIAASAVPSLVLARGH+IE+VPELPLVVSDS EGVE+TSAA+KVLKQ+GA
Sbjct: 124 VNQKRYAVVSAIAASAVPSLVLARGHKIETVPELPLVVSDSIEGVEETSAALKVLKQIGA 183

Query: 182 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 241
           + DAEKAKDSH+IRPGKGKMRNRRYI+RKGPLIVYGTEGAKLVKAFRNIPG++I NVERL
Sbjct: 184 YSDAEKAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERL 243

Query: 242 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 301
           NLLKLAPGGHLGRFV+WTKSAFEKLDSIYGSF+K SEKK GYVLPRSKMVNADL+RIINS
Sbjct: 244 NLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARIINS 303

Query: 302 DEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           DEVQSVV PI++  KRAPLKKNPL+ LN MLKLNP
Sbjct: 304 DEVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNP 338

[Close]

BLAST of Carg25801 vs. ExPASy Swiss-Prot
Match: Q9SF40 (60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 1.1e-160
Identity = 282/336 (83.93%), Postives = 315/336 (93.75%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60
           MA AAARPLV++Q+L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           SDE+QSVV PIKK  KRA LKKNPLKNLN MLKLNP
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNP 336

[Close]

BLAST of Carg25801 vs. ExPASy Swiss-Prot
Match: P49691 (60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2)

HSP 1 Score: 561.6 bits (1446), Expect = 6.2e-159
Identity = 281/336 (83.63%), Postives = 312/336 (92.86%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60
           +A AAARPLV+VQ L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           SDEVQSVV PIK   KRA LKKNPLKNLN M KLNP
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNP 337

[Close]

BLAST of Carg25801 vs. ExPASy Swiss-Prot
Match: Q9D8E6 (60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3)

HSP 1 Score: 419.9 bits (1078), Expect = 2.9e-116
Identity = 208/334 (62.28%), Postives = 261/334 (78.14%), Query Frame = 0


Query: 3   VAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVSKR 62
           +A ARPL+SV S +G+    +   V LP V +A IRPDIV+FVH+N+ KN+RQPYAVS+ 
Sbjct: 1   MACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSEL 60

Query: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 122
           AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N 
Sbjct: 61  AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 120

Query: 123 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 182
            QKRYA+ SA+AASA+P+LV+++GHRIE VPELPLVV D  EG +KT  A+++LK++ A+
Sbjct: 121 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVQLLKKLKAW 180

Query: 183 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 242
            D +K   S  +R GKGKMRNRR I R+GP I+Y  +   ++KAFRNIPG+ + NV +LN
Sbjct: 181 NDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLN 240

Query: 243 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSD 302
           +LKLAPGGH+GRF IWT+SAF KLD +YG++ K +  K  Y LP  KM+N DLSRI+ S 
Sbjct: 241 ILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMMNTDLSRILKSP 300

Query: 303 EVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           E+Q  ++  +K + R  LKKNPLKNL  MLKLNP
Sbjct: 301 EIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNP 330

[Close]

BLAST of Carg25801 vs. ExPASy Swiss-Prot
Match: P36578 (60S ribosomal protein L4 OS=Homo sapiens OX=9606 GN=RPL4 PE=1 SV=5)

HSP 1 Score: 419.5 bits (1077), Expect = 3.8e-116
Identity = 208/334 (62.28%), Postives = 260/334 (77.84%), Query Frame = 0


Query: 3   VAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVSKR 62
           +A ARPL+SV S +G+    +   V LP V +A IRPDIV+FVH+N+ KN+RQPYAVS+ 
Sbjct: 1   MACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSEL 60

Query: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 122
           AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N 
Sbjct: 61  AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 120

Query: 123 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 182
            QKRYA+ SA+AASA+P+LV+++GHRIE VPELPLVV D  EG +KT  A+ +LK++ A+
Sbjct: 121 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAW 180

Query: 183 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 242
            D +K   S  +R GKGKMRNRR I R+GP I+Y  +   ++KAFRNIPG+ + NV +LN
Sbjct: 181 NDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLN 240

Query: 243 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSD 302
           +LKLAPGGH+GRF IWT+SAF KLD +YG++ K +  K  Y LP  KM+N DLSRI+ S 
Sbjct: 241 ILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSP 300

Query: 303 EVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           E+Q  ++  +K + R  LKKNPLKNL  MLKLNP
Sbjct: 301 EIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNP 330

[Close]

BLAST of Carg25801 vs. ExPASy TrEMBL
Match: A0A6J1HEY8 (60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111463360 PE=3 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 4.9e-183
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60
           MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS
Sbjct: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP
Sbjct: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 336

[Close]

BLAST of Carg25801 vs. ExPASy TrEMBL
Match: A0A6J1I983 (60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111471180 PE=3 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 1.1e-182
Identity = 335/336 (99.70%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60
           MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVM+ASIRPDIVSFVHSNISKNSRQPYAVS
Sbjct: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP
Sbjct: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 336

[Close]

BLAST of Carg25801 vs. ExPASy TrEMBL
Match: A0A6J1EDI0 (60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111433183 PE=3 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 9.6e-179
Identity = 327/333 (98.20%), Postives = 330/333 (99.10%), Query Frame = 0


Query: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVSKRA 63
           AAARPLVSVQSLEGDMATDA P VPLPDVM+ASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 3   AAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62

Query: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAA+KVLKQVGAFP
Sbjct: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAFP 182

Query: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243
           DAEKAKDSH+IRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 183 DAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242

Query: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302

Query: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           VQSVVKPIKK VKRAPLKKNPLKNLNAMLKLNP
Sbjct: 303 VQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNP 335

[Close]

BLAST of Carg25801 vs. ExPASy TrEMBL
Match: A0A5A7TZA0 (60S ribosomal protein L4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00800 PE=3 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 1.4e-177
Identity = 327/333 (98.20%), Postives = 328/333 (98.50%), Query Frame = 0


Query: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVSKRA 63
           AAARPLVSVQSLEGDMATDAAP VPLPDVM+ASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62

Query: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP
Sbjct: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182

Query: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243
           DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYG EGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGAEGAKLVKAFRNIPGVEIANVERLNL 242

Query: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302

Query: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           VQSVVKPIKK VKR  LKKNPLKNLNAMLKLNP
Sbjct: 303 VQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNP 335

[Close]

BLAST of Carg25801 vs. ExPASy TrEMBL
Match: A0A1S3BL28 (60S ribosomal protein L4-like OS=Cucumis melo OX=3656 GN=LOC103491208 PE=3 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 1.4e-177
Identity = 327/333 (98.20%), Postives = 328/333 (98.50%), Query Frame = 0


Query: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVSKRA 63
           AAARPLVSVQSLEGDMATDAAP VPLPDVM+ASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62

Query: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP
Sbjct: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182

Query: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243
           DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYG EGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGAEGAKLVKAFRNIPGVEIANVERLNL 242

Query: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302

Query: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           VQSVVKPIKK VKR  LKKNPLKNLNAMLKLNP
Sbjct: 303 VQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNP 335

[Close]

BLAST of Carg25801 vs. TAIR 10
Match: AT3G09630.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 567.4 bits (1461), Expect = 8.1e-162
Identity = 282/336 (83.93%), Postives = 315/336 (93.75%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60
           MA AAARPLV++Q+L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           SDE+QSVV PIKK  KRA LKKNPLKNLN MLKLNP
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNP 336

[Close]

BLAST of Carg25801 vs. TAIR 10
Match: AT3G09630.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 567.4 bits (1461), Expect = 8.1e-162
Identity = 282/336 (83.93%), Postives = 315/336 (93.75%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60
           MA AAARPLV++Q+L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           SDE+QSVV PIKK  KRA LKKNPLKNLN MLKLNP
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNP 336

[Close]

BLAST of Carg25801 vs. TAIR 10
Match: AT5G02870.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 561.6 bits (1446), Expect = 4.4e-160
Identity = 281/336 (83.63%), Postives = 312/336 (92.86%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60
           +A AAARPLV+VQ L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           SDEVQSVV PIK   KRA LKKNPLKNLN M KLNP
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNP 337

[Close]

BLAST of Carg25801 vs. TAIR 10
Match: AT5G02870.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 561.6 bits (1446), Expect = 4.4e-160
Identity = 281/336 (83.63%), Postives = 312/336 (92.86%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60
           +A AAARPLV+VQ L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNP 337
           SDEVQSVV PIK   KRA LKKNPLKNLN M KLNP
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNP 337

The following BLAST results are available for this feature:

BLAST of Carg25801 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027280.1	6.0e-191	100.00	60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022963036.1	1.0e-182	100.00	60S ribosomal protein L4 [Cucurbita moschata]	[more]
XP_022972645.1	2.3e-182	99.70	60S ribosomal protein L4-like [Cucurbita maxima] >XP_023517997.1 60S ribosomal p...	[more]
KAG6595268.1	2.3e-182	99.70	60S ribosomal protein L4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022925909.1	2.0e-178	98.20	60S ribosomal protein L4 [Cucurbita moschata] >XP_023544338.1 60S ribosomal prot...	[more]

BLAST of Carg25801 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF97	2.8e-167	89.25	60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1	[more]
Q9SF40	1.1e-160	83.93	60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1	[more]
P49691	6.2e-159	83.63	60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2	[more]
Q9D8E6	2.9e-116	62.28	60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3	[more]
P36578	3.8e-116	62.28	60S ribosomal protein L4 OS=Homo sapiens OX=9606 GN=RPL4 PE=1 SV=5	[more]

BLAST of Carg25801 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HEY8	4.9e-183	100.00	60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111463360 PE=3 SV=1	[more]
A0A6J1I983	1.1e-182	99.70	60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111471180 PE=3 S...	[more]
A0A6J1EDI0	9.6e-179	98.20	60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111433183 PE=3 SV=1	[more]
A0A5A7TZA0	1.4e-177	98.20	60S ribosomal protein L4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BL28	1.4e-177	98.20	60S ribosomal protein L4-like OS=Cucumis melo OX=3656 GN=LOC103491208 PE=3 SV=1	[more]

BLAST of Carg25801 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09630.1	8.1e-162	83.93	Ribosomal protein L4/L1 family	[more]
AT3G09630.2	8.1e-162	83.93	Ribosomal protein L4/L1 family	[more]
AT5G02870.1	4.4e-160	83.63	Ribosomal protein L4/L1 family	[more]
AT5G02870.2	4.4e-160	83.63	Ribosomal protein L4/L1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002136	Ribosomal protein L4/L1e	PFAM	PF00573	Ribosomal_L4	coord: 27..267 e-value: 2.4E-40 score: 138.3
IPR025755	60S ribosomal protein L4, C-terminal domain	PFAM	PF14374	Ribos_L4_asso_C	coord: 281..342 e-value: 1.6E-23 score: 82.5
IPR023574	Ribosomal protein L4 domain superfamily	GENE3D	3.40.1370.10		coord: 4..309 e-value: 4.9E-142 score: 474.4
IPR023574	Ribosomal protein L4 domain superfamily	SUPERFAMILY	52166	Ribosomal protein L4	coord: 10..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..74
None	No IPR available	PANTHER	PTHR19431:SF6	BNAC03G35890D PROTEIN	coord: 3..336
None	No IPR available	PANTHER	PTHR19431	60S RIBOSOMAL PROTEIN L4	coord: 3..336
IPR013000	Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site	PROSITE	PS00939	RIBOSOMAL_L1E	coord: 121..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25801-RA	Carg25801-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome