Carg25773 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25773
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Basic helix-loop-helix transcription factor
Location	Carg_Chr08: 1740022 .. 1741571 (+)
RNA-Seq Expression	Carg25773
Synteny	Carg25773

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCAAGGTAGCTGGAACTGACGGGGACTTGGCCAGAGCTGTTGCTGCTGCGGCGTCGGCGGCTCAAGGTCAAGCTCCGACGATGCTTCAACTTAGTTCCGGCGACGGCGCTGGCGACATCACTACGATTGGAAGTGGAAGTGGAAGTATTGGTGGAGCAAGGTTTCATGGCGGAACCCCTTTTCCTTTAGGATTGAGCTTGGACCAAGCTATTGTTCTTTAAATATCTGTTGACATGGTTGTTCTTTTTTGTGGGAAAGGGAGTGATTGAATTGCATTTAGTGACTCTTTTTCAATCTTTTTGCAGGTTTATCAAGGCCAACAAGTGCATGCTACTATGGGTGCAACTCCGCAGCCACCAGCCATGCGCCCTAGGGTACGGGCCAGACGAGGGCAGGCGACTGATCCACATAGCTCTGCCGAGCGGGTAAGAGAGTTCTCCATTTTGGTTTATAACTTCTGAAACTTAATCCTTAGAAATGAGCATATATTCTTTTCGTGTTCTTGTTGTTTTCCAAAATCTTGTTTGCATAACTAACCCGGAAAAACATATGATCACAAGGAGTTTAAATGATCATAACCTGTGGTGATTTTTCCCTACATGGCTAAGATCTTAATTGTCAATAGCTCTAATTTTTCCTTTACATGAATGATGATCCCACGTTGGTTGGAGAGGAAAATGAAGCATTTCTTACCAGAGTGTGAATTTTTCTTTAGTAGACGCGTTTTAAAACCTTAAGGGAAAGCCTGGAAGAGAAAGCCCAAATAGTACAATATTTGCTAGTGGTGGGATTGGGCGGTTACAAATTGTATTAGAGCCAGGCACCGAACGGTGTGCCAGCAAGAACGTTGAGCCCCCAAGGGGGTGGATTGTGAGATCTCATCTTGGTTGGAGAGTAAAATGAAGTATTCCTTATAAGGGTGTGGAAACTTCTCCCTAGTAGACGTGCTTTAAATCCTTGAGGAAAAGCCCAGAAGGGAAAGTTCAAAGAGCGGTGGTCTTGAGCTGTTACAAATGGAATCAGAGCCAAACACTGAACAGTGTGCCAGTGACGACGCTGGCTCCCAAGGTGAGTGAATTGTGAGATCCCACATTGGTTGAAGAGGGAAACAAAACATTTTTTACAAAGGTGTGGAAACGTATCTCTAATAGAGCGTTTTAAAACCTTGAGAGGAACTTTGAAGAGAAAGACCAAAGAGGACAATATTCACTAGCAGTGAACTTGGACTATTACCAACCTCCATCTCCGAAATTGAAAAATGAGTGGTTTATATTTTGATGGTTTATTTAGGACCCCATTTCAAAGAGGGAGGGGGACATTTTGATTCCAATGTCTTCTCTCTTCCACTTAAAATAGTAGATTTTCATGGATGCTTGAGTAGCCTGTTTACTATTTCCTAGAGATAATGCAATGTCTTCTAAACGTTGGATTCTCAATCTTAGTGTGTACTCATTTTCTTCCCCTTTCTGGGTAGATGGATAGAGCTGCCATGCTCGATGAAATAGTGGACTACGTAAAGTTCCTACATCTCCAAGTAAAGGTGAATTGA

mRNA sequence

AGCAAGGTAGCTGGAACTGACGGGGACTTGGCCAGAGCTGTTGCTGCTGCGGCGTCGGCGGCTCAAGGTCAAGCTCCGACGATGCTTCAACTTAGTTCCGGCGACGGCGCTGGCGACATCACTACGATTGGAAGTGGAAGTGGAAGTATTGGTGGAGCAAGGTTTCATGGCGGAACCCCTTTTCCTTTAGGATTGAGCTTGGACCAAGCTATTGTTTATCAAGGCCAACAAGTGCATGCTACTATGGGTGCAACTCCGCAGCCACCAGCCATGCGCCCTAGGGTACGGGCCAGACGAGGGCAGGCGACTGATCCACATAGCTCTGCCGAGCGGGTAAGAGAGTTCTCCATTTTGATGGATAGAGCTGCCATGCTCGATGAAATAGTGGACTACGTAAAGTTCCTACATCTCCAAGTAAAGGTGAATTGA

Coding sequence (CDS)

AGCAAGGTAGCTGGAACTGACGGGGACTTGGCCAGAGCTGTTGCTGCTGCGGCGTCGGCGGCTCAAGGTCAAGCTCCGACGATGCTTCAACTTAGTTCCGGCGACGGCGCTGGCGACATCACTACGATTGGAAGTGGAAGTGGAAGTATTGGTGGAGCAAGGTTTCATGGCGGAACCCCTTTTCCTTTAGGATTGAGCTTGGACCAAGCTATTGTTTATCAAGGCCAACAAGTGCATGCTACTATGGGTGCAACTCCGCAGCCACCAGCCATGCGCCCTAGGGTACGGGCCAGACGAGGGCAGGCGACTGATCCACATAGCTCTGCCGAGCGGGTAAGAGAGTTCTCCATTTTGATGGATAGAGCTGCCATGCTCGATGAAATAGTGGACTACGTAAAGTTCCTACATCTCCAAGTAAAGGTGAATTGA

Protein sequence

SKVAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQAIVYQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSILMDRAAMLDEIVDYVKFLHLQVKVN

Homology

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BLAST of Carg25773 vs. NCBI nr
Match: KAG7025491.1 (Transcription factor UNE12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266.5 bits (680), Expect = 1.3e-67
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   SKVAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTP 60
           SKVAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTP
Sbjct: 1   SKVAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTP 60

Query: 61  FPLGLSLDQAIVYQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSILMD 120
           FPLGLSLDQAIVYQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSILMD
Sbjct: 61  FPLGLSLDQAIVYQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSILMD 120

Query: 121 RAAMLDEIVDYVKFLHLQVKVN 143
           RAAMLDEIVDYVKFLHLQVKVN
Sbjct: 121 RAAMLDEIVDYVKFLHLQVKVN 142

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BLAST of Carg25773 vs. NCBI nr
Match: KAG6593082.1 (Light-inducible protein CPRF2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 238.0 bits (606), Expect = 4.9e-59
Identity = 131/141 (92.91%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 1   SKVAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTP 60
           SKVAGTDGDLARAVAAAASAAQGQAPTMLQLSSGD AGDITTIGSGSGSIGGARFHGGTP
Sbjct: 431 SKVAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDCAGDITTIGSGSGSIGGARFHGGTP 490

Query: 61  FPLGLSLDQAIVYQGQQVHATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSILMD 120
           FPLGLSLDQAIVYQG QVHATMGATPQPPAMRPRVRARRGQATDPHS+AER       MD
Sbjct: 491 FPLGLSLDQAIVYQGHQVHATMGATPQPPAMRPRVRARRGQATDPHSTAER-------MD 550

Query: 121 RAAMLDEIVDYVKFLHLQVKV 142
           RAAMLDEIVDYVKFLHLQVKV
Sbjct: 551 RAAMLDEIVDYVKFLHLQVKV 564

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BLAST of Carg25773 vs. NCBI nr
Match: XP_022954052.1 (transcription factor UNE12 [Cucurbita moschata])

HSP 1 Score: 175.3 bits (443), Expect = 3.9e-40
Identity = 111/184 (60.33%), Postives = 117/184 (63.59%), Query Frame = 0


Query: 3   VAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFP 62
           +AGTDG LA A AAAA+AA GQAP MLQLSSGDG G I+TI  GSGS+GGA FHGGTPFP
Sbjct: 30  LAGTDGGLAGAAAAAAAAAHGQAPMMLQLSSGDGGGHISTI--GSGSVGGAGFHGGTPFP 89

Query: 63  LGLSLDQA------------------------------IVYQGQQVHATMGATPQPPAMR 122
           LGLSLDQ                                VYQGQQ+HATMGA P PP MR
Sbjct: 90  LGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRASSVKNVYQGQQMHATMGAAPHPPTMR 149

Query: 123 PRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHL 142
           PRVRARRGQATDPHS AER+R   I                 DRAAMLDEIVDYVKFL L
Sbjct: 150 PRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRL 209

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BLAST of Carg25773 vs. NCBI nr
Match: XP_022991272.1 (transcription factor UNE12 [Cucurbita maxima])

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-39
Identity = 110/184 (59.78%), Postives = 116/184 (63.04%), Query Frame = 0


Query: 3   VAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFP 62
           +AGTDG L  A AAAA+AA GQAP MLQLSSGDG G I+TI  GSGS+GGA FHGGTPFP
Sbjct: 30  LAGTDGGLVGAAAAAAAAAHGQAPMMLQLSSGDGGGHISTI--GSGSVGGAGFHGGTPFP 89

Query: 63  LGLSLDQA------------------------------IVYQGQQVHATMGATPQPPAMR 122
           LGLSLDQ                                VYQGQQ+HATMGA P PP MR
Sbjct: 90  LGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRASTVKNVYQGQQMHATMGAAPHPPTMR 149

Query: 123 PRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHL 142
           PRVRARRGQATDPHS AER+R   I                 DRAAMLDEIVDYVKFL L
Sbjct: 150 PRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRL 209

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BLAST of Carg25773 vs. NCBI nr
Match: KAG6575941.1 (Transcription factor UNE12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014474.1 Transcription factor UNE12 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 170.6 bits (431), Expect = 9.5e-39
Identity = 111/184 (60.33%), Postives = 117/184 (63.59%), Query Frame = 0


Query: 3   VAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFP 62
           +AGTDG LA A AAAA+AA GQAP MLQLSSGDG G I+TI  GSGS+GGA FHGGTPFP
Sbjct: 30  LAGTDGGLAGA-AAAAAAAHGQAPMMLQLSSGDGGGHISTI--GSGSVGGAGFHGGTPFP 89

Query: 63  LGLSLDQA------------------------------IVYQGQQVHATMGATPQPPAMR 122
           LGLSLDQ                                VYQGQQ+HATMGA P PP MR
Sbjct: 90  LGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRASSVKNVYQGQQMHATMGAAPHPPTMR 149

Query: 123 PRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHL 142
           PRVRARRGQATDPHS AER+R   I                 DRAAMLDEIVDYVKFL L
Sbjct: 150 PRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRL 209

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BLAST of Carg25773 vs. ExPASy Swiss-Prot
Match: O22768 (Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=1 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 5.3e-16
Identity = 71/166 (42.77%), Postives = 81/166 (48.80%), Query Frame = 0


Query: 23  GQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------ 82
           G  P MLQL SG+    +  +G GSG  G   FH    FPLGLSLDQ             
Sbjct: 47  GAPPMMLQLGSGEEGSHMGGLG-GSGPTG---FH-NQMFPLGLSLDQGKGPGFLRPEGGH 106

Query: 83  -------------------IVYQGQQVHATMGATP-QPPAMRPRVRARRGQATDPHSSAE 142
                               V+ GQ +     + P QP ++RPRVRARRGQATDPHS AE
Sbjct: 107 GSGKRFSDDVVDNRCSSMKPVFHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAE 166

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BLAST of Carg25773 vs. ExPASy Swiss-Prot
Match: Q93Y00 (Transcription factor bHLH7 OS=Arabidopsis thaliana OX=3702 GN=BHLH7 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.8e-14
Identity = 69/165 (41.82%), Postives = 80/165 (48.48%), Query Frame = 0


Query: 23  GQAPTMLQLSSGDGAGDITTIGS--GSGSIGGARFHGGTPFPLGLSLDQA---------- 82
           G  P MLQL SG+  G+   +G+  G G +G   FH    FPLGLSLDQ           
Sbjct: 46  GPPPMMLQLGSGN-EGNHNHMGAIGGGGPVG---FH-NQMFPLGLSLDQGKGHGFLKPDE 105

Query: 83  ------------------IVYQGQQVHATMGATP-QPPAMRPRVRARRGQATDPHSSAER 142
                              ++ GQ +       P Q   +RPRVRARRGQATDPHS AER
Sbjct: 106 TGKRFQDDVLDNRCSSMKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAER 165

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BLAST of Carg25773 vs. ExPASy Swiss-Prot
Match: Q9ZUG9 (Transcription factor LRL1 OS=Arabidopsis thaliana OX=3702 GN=LRL1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.1e-11
Identity = 41/77 (53.25%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 80  ATMGATPQPPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAM 139
           AT G    PP  R ++RARRGQATDPHS AER+R   I                 D+A+M
Sbjct: 123 ATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASM 182

Query: 140 LDEIVDYVKFLHLQVKV 142
           LDEI+DYVKFL LQVKV
Sbjct: 183 LDEIIDYVKFLQLQVKV 199

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BLAST of Carg25773 vs. ExPASy Swiss-Prot
Match: Q8S3D5 (Transcription factor LRL2 OS=Arabidopsis thaliana OX=3702 GN=LRL2 PE=2 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 8.7e-11
Identity = 53/127 (41.73%), Postives = 61/127 (48.03%), Query Frame = 0


Query: 35  DGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQAIVYQGQ-----QVHATMGATPQPP 94
           D    IT I         A F+G +   L   L Q    Q Q        AT G     P
Sbjct: 65  DSRNQITMIPLSHNHPNDALFNGFSTGSLPFHLPQGSGGQTQTQSQATASATTGGATAQP 124

Query: 95  AMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKF 142
             +P+VRARRGQATDPHS AER+R   I                 D+A+MLDEI+DYVKF
Sbjct: 125 QTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKF 184

[Close]

BLAST of Carg25773 vs. ExPASy Swiss-Prot
Match: Q9LSQ3 (Transcription factor LRL3 OS=Arabidopsis thaliana OX=3702 GN=LRL3 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.7e-10
Identity = 41/84 (48.81%), Postives = 50/84 (59.52%), Query Frame = 0


Query: 74  QGQQVHATMGATPQPPA-MRPRVRARRGQATDPHSSAERVREFSIL-------------- 133
           +G Q   T+  T  P    +PRVRARRGQATDPHS AER+R   I               
Sbjct: 77  EGLQPQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTN 136

Query: 134 -MDRAAMLDEIVDYVKFLHLQVKV 142
             D+A+MLDEI++YV+FL LQVKV
Sbjct: 137 KTDKASMLDEIIEYVRFLQLQVKV 160

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BLAST of Carg25773 vs. ExPASy TrEMBL
Match: A0A6J1GPY3 (transcription factor UNE12 OS=Cucurbita moschata OX=3662 GN=LOC111456429 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.9e-40
Identity = 111/184 (60.33%), Postives = 117/184 (63.59%), Query Frame = 0


Query: 3   VAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFP 62
           +AGTDG LA A AAAA+AA GQAP MLQLSSGDG G I+TI  GSGS+GGA FHGGTPFP
Sbjct: 30  LAGTDGGLAGAAAAAAAAAHGQAPMMLQLSSGDGGGHISTI--GSGSVGGAGFHGGTPFP 89

Query: 63  LGLSLDQA------------------------------IVYQGQQVHATMGATPQPPAMR 122
           LGLSLDQ                                VYQGQQ+HATMGA P PP MR
Sbjct: 90  LGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRASSVKNVYQGQQMHATMGAAPHPPTMR 149

Query: 123 PRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHL 142
           PRVRARRGQATDPHS AER+R   I                 DRAAMLDEIVDYVKFL L
Sbjct: 150 PRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRL 209

[Close]

BLAST of Carg25773 vs. ExPASy TrEMBL
Match: A0A6J1JLC3 (transcription factor UNE12 OS=Cucurbita maxima OX=3661 GN=LOC111487975 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.5e-40
Identity = 110/184 (59.78%), Postives = 116/184 (63.04%), Query Frame = 0


Query: 3   VAGTDGDLARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFP 62
           +AGTDG L  A AAAA+AA GQAP MLQLSSGDG G I+TI  GSGS+GGA FHGGTPFP
Sbjct: 30  LAGTDGGLVGAAAAAAAAAHGQAPMMLQLSSGDGGGHISTI--GSGSVGGAGFHGGTPFP 89

Query: 63  LGLSLDQA------------------------------IVYQGQQVHATMGATPQPPAMR 122
           LGLSLDQ                                VYQGQQ+HATMGA P PP MR
Sbjct: 90  LGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRASTVKNVYQGQQMHATMGAAPHPPTMR 149

Query: 123 PRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFLHL 142
           PRVRARRGQATDPHS AER+R   I                 DRAAMLDEIVDYVKFL L
Sbjct: 150 PRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRL 209

[Close]

BLAST of Carg25773 vs. ExPASy TrEMBL
Match: A0A5A7V1G8 (Transcription factor UNE12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00520 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 6.0e-39
Identity = 111/186 (59.68%), Postives = 117/186 (62.90%), Query Frame = 0


Query: 3   VAGTDGDL--ARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTP 62
           +AGTDG L  A A AAAA+AAQGQAP MLQLSSGDG G ITTI  GSGS+GG  FHGG P
Sbjct: 29  LAGTDGGLAGAAAAAAAAAAAQGQAPMMLQLSSGDGGGHITTI--GSGSVGGTGFHGGPP 88

Query: 63  FPLGLSLDQA------------------------------IVYQGQQVHATMGATPQPPA 122
           FPLGLSLDQ                                V+QGQQ+HATMGA P PPA
Sbjct: 89  FPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRASSVKNVFQGQQMHATMGAAPHPPA 148

Query: 123 MRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFL 142
           MRPRVRARRGQATDPHS AER+R   I                 DRAAMLDEIVDYVKFL
Sbjct: 149 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 208

[Close]

BLAST of Carg25773 vs. ExPASy TrEMBL
Match: A0A1S3BR51 (transcription factor UNE12 OS=Cucumis melo OX=3656 GN=LOC103492616 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 6.0e-39
Identity = 111/186 (59.68%), Postives = 117/186 (62.90%), Query Frame = 0


Query: 3   VAGTDGDL--ARAVAAAASAAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTP 62
           +AGTDG L  A A AAAA+AAQGQAP MLQLSSGDG G ITTI  GSGS+GG  FHGG P
Sbjct: 29  LAGTDGGLAGAAAAAAAAAAAQGQAPMMLQLSSGDGGGHITTI--GSGSVGGTGFHGGPP 88

Query: 63  FPLGLSLDQA------------------------------IVYQGQQVHATMGATPQPPA 122
           FPLGLSLDQ                                V+QGQQ+HATMGA P PPA
Sbjct: 89  FPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRASSVKNVFQGQQMHATMGAAPHPPA 148

Query: 123 MRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYVKFL 142
           MRPRVRARRGQATDPHS AER+R   I                 DRAAMLDEIVDYVKFL
Sbjct: 149 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 208

[Close]

BLAST of Carg25773 vs. ExPASy TrEMBL
Match: A0A0A0KAD2 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G378550 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 6.7e-38
Identity = 110/189 (58.20%), Postives = 116/189 (61.38%), Query Frame = 0


Query: 3   VAGTDGDLARAVAAAAS-----AAQGQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHG 62
           +AGTDG LA A AAAA+     AAQGQAP MLQLSSGDG G ITTI  GSGS+GG  FHG
Sbjct: 29  LAGTDGGLAGAAAAAAAAAAAVAAQGQAPMMLQLSSGDGGGHITTI--GSGSVGGTGFHG 88

Query: 63  GTPFPLGLSLDQA------------------------------IVYQGQQVHATMGATPQ 122
           G PFPLGLSLDQ                                V+QGQQ+HA MGA P 
Sbjct: 89  GPPFPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRASSVKNVFQGQQMHAAMGAAPH 148

Query: 123 PPAMRPRVRARRGQATDPHSSAERVREFSIL---------------MDRAAMLDEIVDYV 142
           PPAMRPRVRARRGQATDPHS AER+R   I                 DRAAMLDEIVDYV
Sbjct: 149 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 208

[Close]

BLAST of Carg25773 vs. TAIR 10
Match: AT4G02590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 3.8e-17
Identity = 71/166 (42.77%), Postives = 81/166 (48.80%), Query Frame = 0


Query: 23  GQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------ 82
           G  P MLQL SG+    +  +G GSG  G   FH    FPLGLSLDQ             
Sbjct: 47  GAPPMMLQLGSGEEGSHMGGLG-GSGPTG---FH-NQMFPLGLSLDQGKGPGFLRPEGGH 106

Query: 83  -------------------IVYQGQQVHATMGATP-QPPAMRPRVRARRGQATDPHSSAE 142
                               V+ GQ +     + P QP ++RPRVRARRGQATDPHS AE
Sbjct: 107 GSGKRFSDDVVDNRCSSMKPVFHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAE 166

[Close]

BLAST of Carg25773 vs. TAIR 10
Match: AT4G02590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 3.8e-17
Identity = 71/166 (42.77%), Postives = 81/166 (48.80%), Query Frame = 0


Query: 23  GQAPTMLQLSSGDGAGDITTIGSGSGSIGGARFHGGTPFPLGLSLDQA------------ 82
           G  P MLQL SG+    +  +G GSG  G   FH    FPLGLSLDQ             
Sbjct: 47  GAPPMMLQLGSGEEGSHMGGLG-GSGPTG---FH-NQMFPLGLSLDQGKGPGFLRPEGGH 106

Query: 83  -------------------IVYQGQQVHATMGATP-QPPAMRPRVRARRGQATDPHSSAE 142
                               V+ GQ +     + P QP ++RPRVRARRGQATDPHS AE
Sbjct: 107 GSGKRFSDDVVDNRCSSMKPVFHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAE 166

[Close]

BLAST of Carg25773 vs. TAIR 10
Match: AT1G03040.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 2.7e-15
Identity = 69/165 (41.82%), Postives = 80/165 (48.48%), Query Frame = 0


Query: 23  GQAPTMLQLSSGDGAGDITTIGS--GSGSIGGARFHGGTPFPLGLSLDQA---------- 82
           G  P MLQL SG+  G+   +G+  G G +G   FH    FPLGLSLDQ           
Sbjct: 46  GPPPMMLQLGSGN-EGNHNHMGAIGGGGPVG---FH-NQMFPLGLSLDQGKGHGFLKPDE 105

Query: 83  ------------------IVYQGQQVHATMGATP-QPPAMRPRVRARRGQATDPHSSAER 142
                              ++ GQ +       P Q   +RPRVRARRGQATDPHS AER
Sbjct: 106 TGKRFQDDVLDNRCSSMKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAER 165

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BLAST of Carg25773 vs. TAIR 10
Match: AT1G03040.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 7.8e-15
Identity = 68/160 (42.50%), Postives = 79/160 (49.38%), Query Frame = 0


Query: 23  GQAPTMLQLSSGDGAGDITTIGS--GSGSIGGARFHGGTPFPLGLSLDQAIVY------- 82
           G  P MLQL SG+  G+   +G+  G G +G   FH    FPLGLSLDQ   +       
Sbjct: 46  GPPPMMLQLGSGN-EGNHNHMGAIGGGGPVG---FH-NQMFPLGLSLDQGKGHGFLKPDE 105

Query: 83  --------------QGQQVHATMGATPQP---PAMRPRVRARRGQATDPHSSAERVREFS 142
                            +   +  A P P     +RPRVRARRGQATDPHS AER+R   
Sbjct: 106 TGKRFQDDVLDNRCSSMKPPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRER 165

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BLAST of Carg25773 vs. TAIR 10
Match: AT4G02590.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 7.8e-15
Identity = 61/143 (42.66%), Postives = 68/143 (47.55%), Query Frame = 0


Query: 46  GSGSIGGARFHGGTPFPLGLSLDQA-------------------------------IVYQ 105
           G G  G   FH    FPLGLSLDQ                                 V+ 
Sbjct: 3   GLGGSGPTGFH-NQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRCSSMKPVFH 62

Query: 106 GQQVHATMGATP-QPPAMRPRVRARRGQATDPHSSAERVREFSIL--------------- 142
           GQ +     + P QP ++RPRVRARRGQATDPHS AER+R   I                
Sbjct: 63  GQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK 122

The following BLAST results are available for this feature:

BLAST of Carg25773 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025491.1	1.3e-67	100.00	Transcription factor UNE12, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6593082.1	4.9e-59	92.91	Light-inducible protein CPRF2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022954052.1	3.9e-40	60.33	transcription factor UNE12 [Cucurbita moschata]	[more]
XP_022991272.1	1.1e-39	59.78	transcription factor UNE12 [Cucurbita maxima]	[more]
KAG6575941.1	9.5e-39	60.33	Transcription factor UNE12, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]

BLAST of Carg25773 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22768	5.3e-16	42.77	Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=1 SV=2	[more]
Q93Y00	3.8e-14	41.82	Transcription factor bHLH7 OS=Arabidopsis thaliana OX=3702 GN=BHLH7 PE=1 SV=1	[more]
Q9ZUG9	5.1e-11	53.25	Transcription factor LRL1 OS=Arabidopsis thaliana OX=3702 GN=LRL1 PE=1 SV=1	[more]
Q8S3D5	8.7e-11	41.73	Transcription factor LRL2 OS=Arabidopsis thaliana OX=3702 GN=LRL2 PE=2 SV=2	[more]
Q9LSQ3	5.7e-10	48.81	Transcription factor LRL3 OS=Arabidopsis thaliana OX=3702 GN=LRL3 PE=2 SV=1	[more]

BLAST of Carg25773 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPY3	1.9e-40	60.33	transcription factor UNE12 OS=Cucurbita moschata OX=3662 GN=LOC111456429 PE=4 SV...	[more]
A0A6J1JLC3	5.5e-40	59.78	transcription factor UNE12 OS=Cucurbita maxima OX=3661 GN=LOC111487975 PE=4 SV=1	[more]
A0A5A7V1G8	6.0e-39	59.68	Transcription factor UNE12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BR51	6.0e-39	59.68	transcription factor UNE12 OS=Cucumis melo OX=3656 GN=LOC103492616 PE=4 SV=1	[more]
A0A0A0KAD2	6.7e-38	58.20	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G378550 PE=4 S...	[more]

BLAST of Carg25773 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02590.1	3.8e-17	42.77	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G02590.2	3.8e-17	42.77	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G03040.1	2.7e-15	41.82	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G03040.2	7.8e-15	42.50	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G02590.3	7.8e-15	42.66	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..109
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 71..141 coord: 14..71
None	No IPR available	PANTHER	PTHR16223:SF217	TRANSCRIPTION FACTOR UNE12 ISOFORM X1	coord: 71..141 coord: 14..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25773-RA	Carg25773-RA	mRNA