
Carg25724 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAGAGATTCGGATACTATCCGTCCAGCTCATTGACACGTGTCAAAAACCCATTGCAGCGGAGAAAATCGCAAGCAACCGGAATCTAAGCTATTGATCCAAAATTATGAGAAGCAGAAAGAAGCGATTAAATGAGAATCGAGAGAGACAGAGAAGGCTGAAGCAAGTGATTAATTCATCGTCGCTATCTCATACAATGGCAGCCATTGGGCCTTGCTGTTCAACGCTTCCTGCAAGAAGGTATACTGTTCTTCCTCCTCTTCTTAACCCTTTAATCCAACATTGTTCCAACTTAGATTTGCCCTTTTCTTCGTTATAATCTCTCCATTCCATTTCGCCTCTTGAATTCCAGATTTGATACAGTATTTGACATCATTTTCATTTGTTCTTAACATTCTGATTTCTAGGGTTTCTCTGTTTGTATGAATTTGTTTGTTTTATGGGAAGAAATGGAAGTCCACTGCCAATTTGTTCAAGCATTTACTGTTTTAGTTACATAATAAGATTAGGATGAGGGCTATGTCTAGTTCGTCTGAGTGATTTTGGCAGCACTTCGACTATCAAAAAGTTTTGAATGATGAGTTTAAGTACTACTAACTTTTGAACTTTGTGTCTTGGTTGGTGCCAAATTGGAGAGGGAAACGAAATATTCCTTACAAGGGAGTGGAAACCTCTCCCTAGTAGACGTGTGATTTGAAGCCGTGAGGTTAACAGCGATACATAACGGGCTAAAGCAAACAATATCTGTTAGTGGTGGGTTTGAGCTATTACAAATGGTATCAGAGTCAGACACCGGGCGATGTGCCGGTGAGGACGCTGGGCCCCCAAGTGGGAGTGGATTGTGATACCCCATTTCAGTTGGAGAGGGAAACGAAACATTTCTTATATGGATGTGGAAACCTCTCCCTAGTAGATTCGTTTTAAAACTGTGAGGCTAAGGGCGATACGTAACAGGACAAAGCGGACAATATCTACTAGCGGTGGACTTAGGCTATTACAAGTACACTTGTGATGATATATTCTAACCCTTGGCTGTTTTGAATGCTAAGATGATTCTTTTATATCAAATGAAAACAATTTACACTCTTTTTTGTTCATATGAAATAAAGGGATTAAGTATGTGTTTCCTCCAGCAACCTAAGGACGTCCTGGCTTTCCATAAGGACTGTTCCTCATAGAAGAACCTATCCAGGGAAACAAGTTCTTCAGAGAAAATTTGGAATTAGAGCTGAAATAAATTTTGTCAATGTTGAAGAAGCCAAGAAACTAACTGCAGATGATGGATATGTAATCGTTGATGTTCGGGACAAATCGCAGTTCGATCGAGCTCACATTAAATCGTGTTACCATGTCCCGCTTTTCATTCAAAATGAAGACAATGATCTTGGTAAAACCTTTTGCTTCCCTACATATTTTGTTATTAGATGTGTTTACTTTGAATGTATGAGATTTGAATTCTGTGCTGTGCAGGAACTATTATCAAAAGAACAGTGCACAACAATTTTTCTGGTCTCTTCTTTGGATTGCCATTTACAAAGCCCAACCCTGAGTTTGTGCAGTCTGTTAAAGCCCAGTTTTCACCTCAAACCAAGCTATTGCTAGTTTGTCAGGAAGGATTAAGGTAAGTTTTTTTTGTCAGTATGATGTTGAGTTATGGTATGGTTAATGTGGAATGAGAGTGATTTTTGTTAAGATTCATATGTTGATCAATAAAGTATGTTCAAATTAACATTAAATTACTTTTTAGAACAATCGATCCATTAACGAGTTCTCAAACACCAAGGTATGGTTTAGCATAGCAAGTACTTGGATTGTTTATAGGTAGCTTGTGAGATCCCACGTCAGTTGAGGAGGAAAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCGCTAGGAGACGTGTTTTAAAACCTTGAGGGGAATCTCGGAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGGCTTGGGCCATTACAAATGGTATCAGAGCCAGACACCGGACGATGTGTTAGCGAGGAGGCTGAGTTCAGAAGGGAGTGGACACGAGGCGATGTGCTAGCAAGGACGCTGGCCCCAAAGGGGGTGGATTGGGGGGTCCCACATCGGTTGGAGAAGGGAACGAGTGCCAGCGAGGATCGCTGGGCACTGAAGAAGGTGGATTGTAAGATCCTACTTTGGTTAGGGAGGAGAACTAAACATTTTTATAAGAGTGTGAAAATCTCTCCCTAGCAGACGTATTTTAAAACCTTGAGAGAAAGCCTGGAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGAGCCATTACAAATGGTATCAGAGCCAGACACCGGACGATGTGTCAGCGAGGAGGCTGAGCCTGGAAGGGGGTGGACACGAGGCGCTGTGCTAGCAAGGAAGCTAGCCCCAAAGGGGGGTGGATTAGGGGGTCCCACATCAATTGGAGAAGGGAATGAGTGCCAGCGAGGACGCTGGGCCCTGAAGAGGGTGGATTGTAAGATCCCACATCGGTTAGGGAGGAGAACGAAACCTTTTTTATAAGGGTGTGAAAACTTCTCCGTAGCAGACGTGTTTTAAAACCTTGAGGGGAAGCCCGGAAGGGAAAGTCCAAAGAAGACAATATCTGCTAGCGGTGGGCTTAGGCCGTTACATATCTTTCGGTGTCATGAGTTCAAATTTTTTTGTTGTAAACATAATAAAATTAAAGTTTTCTCGTGGCTTTGGAGCGGCCGAAGAAGCGTTTGAATTGTCAAGAAGAAAGGAAAGAAAGAAAAGGGTTAAAATATTATTTTGACCGGGCTCGTTTCATTTTAATCTCTATACTTTTAAGCGTCGTGAATAGATATGATCAGCATAGCGACGTGTTTGAGAATGACAATAGATATAATGTGTTTGTTTTGATTGGTAAATAGGTCCGCTGCTGCTGCTGACAAGTTAGAGAAAGCTGGTTTTGAAAACATAGCTTGTATAACATCAGGACTCCAATCAGTAAAACCAGGTTAAATTTTTCATCTAATTTATCGTAATCGATTAATTTTCATGTTCGTTAGTCGTATTATGGAACACCGAAAAAAACCGCTGGCTTATTAAATGACCTATTGAGTCATAGAAATGACTCGACAAAGAATTATTTTATGTTAAACAATACGTAGAGTAAATCTCAATGAAAGTAAGACGTGTAGGCAGATCAATTCATCAAGTTTTGATAGAATTCACGTTTTTGGTTCTTTTGTACGCTACGATAGGCACATTTGAGTCGGTTGGTTCGGGTGAGTTACAAGATGCTGGCAAAGCTGGTTTGGTGCAGATCCAAGGCAAGATTTCAGCTGTGCTAGGAACTGTTCTTATCTGTAAGCTTTCTAAGTCTCTATGTTTGGGTGTTTTTTCGATTTAGCTAAGGTGTTCATATGATCTGAGAACCCGACTAACCTAAATTACTCAATCCAGACCATAAAGGTTAGGTTGGGTTAGATTTTTTTCCGATTTGGGTTGGGTTGAATTTTTAAAAAACCGAAAATTTGAATCAGTTTGCGGGTTGATGGATCTCGAAAATAGGATTACAACCCAATCTAACCCTACCCTACCTTTAAGATTATTACGAAAATTAAGAATATTTGACGTTTGTAACCGATGATGCATCGTGACTTGTTAATGTAAGATGTATTATAAAACTGACAATCCAACCCACCTAGATGGGCAGGTTGAGTTGTGCACGGTATTCGGGTTGCTCAAGTCACCAAGCTAACCAACTTGAAATTTCGAGCTAGTCCAAAAAATTTCCCCAATGCACCCCGTGTACACCTCTAGATTTAGTCGACACAAAATTAAAACTTTAATGATCGATTAAGCACGTTTTTATTAGACACAAAATTGAAAGCTTAGAAACCGTTGCATACTAACCGTTATTTGAATGAATTTGGTAGGTGCATATTTGTTCATAACCCTGTTTCCAGATCAGGCTGAGAAGCTGCTTCAAATGGTACCATCAAGTTAAACCATTGTCCAACATAAACCCTTTAATTTTAATTTTTTGTTTATTTATTATAATTAATTTCTCTTTTTAACAGCATATTTTTCCATACCATCCTCTCTTCTCTTCCCTATCTCGACTACTTTATAAACGTGTCTAGATTATTTTATTAACGTAATGTCGGTTAGTTCTATTGGTTAGATATCGATGTCTCTGCCTACTAATCATAGATTTAAATTACGTAATATTTTTTTAAAAAAATTACCAAATTCTAATAATGAAATTCAAGGACCGTAGATCTATTAATTTAAAGGCTAAATT CTAGAGATTCGGATACTATCCGTCCAGCTCATTGACACGTGTCAAAAACCCATTGCAGCGGAGAAAATCGCAAGCAACCGGAATCTAAGCTATTGATCCAAAATTATGAGAAGCAGAAAGAAGCGATTAAATGAGAATCGAGAGAGACAGAGAAGGCTGAAGCAAGTGATTAATTCATCGTCGCTATCTCATACAATGGCAGCCATTGGGCCTTGCTGTTCAACGCTTCCTGCAAGAAGCAACCTAAGGACGTCCTGGCTTTCCATAAGGACTGTTCCTCATAGAAGAACCTATCCAGGGAAACAAGTTCTTCAGAGAAAATTTGGAATTAGAGCTGAAATAAATTTTGTCAATGTTGAAGAAGCCAAGAAACTAACTGCAGATGATGGATATGTAATCGTTGATGTTCGGGACAAATCGCAGTTCGATCGAGCTCACATTAAATCGTGTTACCATGTCCCGCTTTTCATTCAAAATGAAGACAATGATCTTGGAACTATTATCAAAAGAACAGTGCACAACAATTTTTCTGGTCTCTTCTTTGGATTGCCATTTACAAAGCCCAACCCTGAGTTTGTGCAGTCTGTTAAAGCCCAGTTTTCACCTCAAACCAAGCTATTGCTAGTTTGTCAGGAAGGATTAAGGTCCGCTGCTGCTGCTGACAAGTTAGAGAAAGCTGGTTTTGAAAACATAGCTTGTATAACATCAGGACTCCAATCAGTAAAACCAGGTTAAATTTTTCATCTAATTTATCGTAATCGATTAATTTTCATGTTCGTTAGTCGTATTATGGAACACCGAAAAAAACCGCTGGCTTATTAAATGACCTATTGAGTCATAGAAATGACTCGACAAAGAATTATTTTATGTTAAACAATACGTAGAGTAAATCTCAATGAAAGTAAGACGTGTAGGCAGATCAATTCATCAAGTTTTGATAGAATTCACGTTTTTGGTTCTTTTGTACGCTACGATAGGCACATTTGAGTCGGTTGGTTCGGGTGAGTTACAAGATGCTGGCAAAGCTGGTTTGGTGCAGATCCAAGGCAAGATTTCAGCTGTGCTAGGAACTGTTCTTATCTGTGCATATTTGTTCATAACCCTGTTTCCAGATCAGGCTGAGAAGCTGCTTCAAATGGTACCATCAAGTTAAACCATTGTCCAACATAAACCCTTTAATTTTAATTTTTTGTTTATTTATTATAATTAATTTCTCTTTTTAACAGCATATTTTTCCATACCATCCTCTCTTCTCTTCCCTATCTCGACTACTTTATAAACGTGTCTAGATTATTTTATTAACGTAATGTCGGTTAGTTCTATTGGTTAGATATCGATGTCTCTGCCTACTAATCATAGATTTAAATTACGTAATATTTTTTTAAAAAAATTACCAAATTCTAATAATGAAATTCAAGGACCGTAGATCTATTAATTTAAAGGCTAAATT ATGAGAAGCAGAAAGAAGCGATTAAATGAGAATCGAGAGAGACAGAGAAGGCTGAAGCAAGTGATTAATTCATCGTCGCTATCTCATACAATGGCAGCCATTGGGCCTTGCTGTTCAACGCTTCCTGCAAGAAGCAACCTAAGGACGTCCTGGCTTTCCATAAGGACTGTTCCTCATAGAAGAACCTATCCAGGGAAACAAGTTCTTCAGAGAAAATTTGGAATTAGAGCTGAAATAAATTTTGTCAATGTTGAAGAAGCCAAGAAACTAACTGCAGATGATGGATATGTAATCGTTGATGTTCGGGACAAATCGCAGTTCGATCGAGCTCACATTAAATCGTGTTACCATGTCCCGCTTTTCATTCAAAATGAAGACAATGATCTTGGAACTATTATCAAAAGAACAGTGCACAACAATTTTTCTGGTCTCTTCTTTGGATTGCCATTTACAAAGCCCAACCCTGAGTTTGTGCAGTCTGTTAAAGCCCAGTTTTCACCTCAAACCAAGCTATTGCTAGTTTGTCAGGAAGGATTAAGGTCCGCTGCTGCTGCTGACAAGTTAGAGAAAGCTGGTTTTGAAAACATAGCTTGTATAACATCAGGACTCCAATCAGTAAAACCAGGTTAA MRSRKKRLNENRERQRRLKQVINSSSLSHTMAAIGPCCSTLPARSNLRTSWLSIRTVPHRRTYPGKQVLQRKFGIRAEINFVNVEEAKKLTADDGYVIVDVRDKSQFDRAHIKSCYHVPLFIQNEDNDLGTIIKRTVHNNFSGLFFGLPFTKPNPEFVQSVKAQFSPQTKLLLVCQEGLRSAAAADKLEKAGFENIACITSGLQSVKPG Homology
BLAST of Carg25724 vs. NCBI nr
Match: XP_022928591.1 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 [Cucurbita moschata]) HSP 1 Score: 415.2 bits (1066), Expect = 3.3e-112 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of Carg25724 vs. NCBI nr
Match: KAG7033557.1 (Rhodanese-like domain-containing protein 9, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 415.2 bits (1066), Expect = 3.3e-112 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of Carg25724 vs. NCBI nr
Match: KAG6603258.1 (Rhodanese-like domain-containing protein 9, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 413.3 bits (1061), Expect = 1.2e-111 Identity = 208/209 (99.52%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of Carg25724 vs. NCBI nr
Match: XP_022967885.1 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 [Cucurbita maxima]) HSP 1 Score: 413.3 bits (1061), Expect = 1.2e-111 Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0
BLAST of Carg25724 vs. NCBI nr
Match: XP_023543594.1 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 412.1 bits (1058), Expect = 2.8e-111 Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0
BLAST of Carg25724 vs. ExPASy Swiss-Prot
Match: O48529 (Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR9 PE=2 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 5.7e-59 Identity = 107/149 (71.81%), Postives = 129/149 (86.58%), Query Frame = 0
BLAST of Carg25724 vs. ExPASy Swiss-Prot
Match: Q9SR92 (Rhodanese-like domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=STR10 PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.0e-20 Identity = 49/136 (36.03%), Postives = 83/136 (61.03%), Query Frame = 0
BLAST of Carg25724 vs. ExPASy Swiss-Prot
Match: Q0WWT7 (Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR11 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.2e-13 Identity = 38/110 (34.55%), Postives = 64/110 (58.18%), Query Frame = 0
BLAST of Carg25724 vs. ExPASy Swiss-Prot
Match: Q94A65 (Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g27700 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.6e-08 Identity = 44/181 (24.31%), Postives = 82/181 (45.30%), Query Frame = 0
BLAST of Carg25724 vs. ExPASy TrEMBL
Match: A0A6J1EKQ2 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435449 PE=4 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 1.6e-112 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of Carg25724 vs. ExPASy TrEMBL
Match: A0A6J1HVN6 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467261 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 6.0e-112 Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0
BLAST of Carg25724 vs. ExPASy TrEMBL
Match: A0A5A7TCE9 (Rhodanese-like domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00610 PE=4 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 1.3e-93 Identity = 170/189 (89.95%), Postives = 180/189 (95.24%), Query Frame = 0
BLAST of Carg25724 vs. ExPASy TrEMBL
Match: A0A1S3B5W0 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486146 PE=4 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 1.3e-93 Identity = 170/189 (89.95%), Postives = 180/189 (95.24%), Query Frame = 0
BLAST of Carg25724 vs. ExPASy TrEMBL
Match: A0A1S3B5Z7 (rhodanese-like domain-containing protein 9, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486146 PE=4 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 1.3e-93 Identity = 170/189 (89.95%), Postives = 180/189 (95.24%), Query Frame = 0
BLAST of Carg25724 vs. TAIR 10
Match: AT2G42220.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 228.8 bits (582), Expect = 4.0e-60 Identity = 107/149 (71.81%), Postives = 129/149 (86.58%), Query Frame = 0
BLAST of Carg25724 vs. TAIR 10
Match: AT3G08920.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 99.8 bits (247), Expect = 2.8e-21 Identity = 49/136 (36.03%), Postives = 83/136 (61.03%), Query Frame = 0
BLAST of Carg25724 vs. TAIR 10
Match: AT4G24750.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 75.9 bits (185), Expect = 4.4e-14 Identity = 38/110 (34.55%), Postives = 64/110 (58.18%), Query Frame = 0
BLAST of Carg25724 vs. TAIR 10
Match: AT4G27700.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 59.7 bits (143), Expect = 3.3e-09 Identity = 44/181 (24.31%), Postives = 82/181 (45.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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