Carg25712 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25712
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Vegetative cell wall protein gp1-like
Location	Carg_Chr14: 14759377 .. 14762471 (+)
RNA-Seq Expression	Carg25712
Synteny	Carg25712

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTCTCTCTCTCTGTTTCCTTTCAGCCACAACAATCTGAGCATGGCCATTACTCTCAGCCTTCCAAAACTCCCCATTATCGCTCCCATTGCTTCCTCCAAGCTTCCACTTCCCTCCATTCCAACCAAATTGCACTTCTCTCAAAACCCCAAATCTCCGCGCACTTTCTTCATTCAGAGTGTTTGTAATCTCAAACCCTATACCCTTCCCCTTACCGCTCTCACATTGCCATTCTTCCTTCATCCACAGGTTGGTTTCTATCTCTTCTTCCGGTTTTAGTATGTGGGATTCTCGGGTTCGATTCGTTTTGATTGGTTTCAGGATGCACTTGCTGCTGGAGGGGAGTTTGGGATTTTGGAGGGAAGGTCAATTGCCCTCATCCACCCTGTTGTTATGGGTGGTCTTTTTGTCTGGACACTCTGGGCTGGCTATTTGGGCTGGCAATGGCGGCGAGTCAGGACGATTCAGAATGAAATTAATGAGCTCAAGAAGCAAGTGGTGCCTGCGGCAGTAGCCCCAGATGGGAAGCCTGTTGAGGCACCTCCATCTCCCACGGAATTGAAGATTCAGCAGCTCACAGAGGTATGTCCGAACCTAACTAACTATCTATTGCTAGACCCAAAATCTCAATTATGGGTGAGTCTGGATTGTGTTTGTGACGAATATGGGTAGGATTAAGGGAATGGAGACCTAAGAAGGAGAAGAAAAGAAGGAATAGAAAAGGCATAATCCTTATTCCTTTCAATGTAGACATAGCGATTCTTAGCATGCCAATAACTAGATTTCTATTAGTATCCCTAGAGGAAAATAAGTGGGATCAGAGCCATGTTCTAAACTCTAATGGGCAAATGGGCATGGATAGACAATACTGATATACTTGAACACTGCGCCATGTTAATTTCTAAAAAAAATGCGACATAACGAGGACACAACTTTTTAATATATATACCTATGTAGGATGTATGTGTTGAAACGTCTAGTACTTCATATGCAAATTTAATAAGCCACAACCCATTTAAGAGAAAATAGCATTGCTCAATTGGTCAAGTTATTTATCTCCTCAAACAGACCAAACTTTCAAATTCTTGCACCTGCATTTGAACTAAAAAATTTGGTTACCATTAACAAAATCAAATCAATACGCTAATCTGTATCATAAAAAATAATGTTATGTGTTAGACGAACACGACTCTCCACAATAGTATGATATTGTCCACTTTGAGTGGAAGCTCTCATGACTTTGATTTGGGCTTTCCCAAAAGGCCTCGTACCAATGGAGAGAGTATTCTTTGTTTATAAACCCATGATCATTCCCTAAATTGGCCGATGTTGGACTTTCATCATCTAACATTATGATCGTTACATAATACAAGTGATACTTAGTTTTTAATGAGATTTTTCAGGATAGGGATTAAGTTATTACAAATTTAAAAGTATAAGTCAAAGTCGAAGGACTAAATCACTATAAGTTTAAAAGTACATGGTCCGAATTATTTGATAATGTCATCTATATTTGAGTTTTATTCAACTATACATTCATTCTACAAGAGTAAATAAGTCAACTCAAATAAAAGTAAACTCTTGAAGTGGTAGAGGTTAGATGGATAGTGATTGTTTATAGAAAATTTGTTTATTTCTTTTGTTATTATTTAACTTGTGTTTATTGTTGAAAGTGCAACTATATAAGTGGTGAAGAATTGTAAGCCCACCAGTAGCGATATTGTCCTCTTTGAGCTTTCTCTCAAGGTTTTAAAACGCATCTGCTAGGAAGAGGTTTCCACACCCTTATAAAAAATGTTTCGTTTCCCTTTCCAATTGATGTGGGATCTCACAATCCATTCTCGGTCAGTGCCCATCGTCCTTGCTAGCACGCGTTCCTCTCTCTCCAATCGACGTGGGATCTCATATGTGGTTAACTCTATTTGGAAGATTGTTTGGAGGAATACTAGGAGGTGGTCCAATGGTGTAAAAAAGAAATAGAGATCATAGGTATATAATTTTGTGGTAGAATCTGAATCTGAAGAGTTGACTTATTTGATTGATTCTTATATCTAAGAATAGAACAGATTCCTTAGATTCTGGTAATTCCATAATCAAAATAGAATGGATTAGTCCATCTACTGAATGCTTACCCAACATATCTGATACCATTGGTGTTTGAACTTCAGGAGAGGAAAGAGCTGATCAAAGGGTCCTTCAGAGATAGACACTTCAATGCTGGTTCCATAATATTAGGATTCGGAGTTTTGGAAGCAATTGGTGGAGGCTTAAATACATGGCTTAGAACAGGAAAGCTTTTTCCAGGCCCTCATTTGTTTGCAGGAGCAGGTAAAGCAAAAGCTTTTGCATCTGAAGCCTTTCTTTTACAAGTTTACGTATCATATGAATGTACTCTACTGACATTGCATTGCATTCCATCCAGATGCTTCTACTTTGGTACTTTAGTTTGGTTTCAACTCTTGATATCGTTGCCACCCGAATTTGAAATGAGATATTGTCTGTTTCTCTATGTAGTTGTTGTGATCTGATATGCATTTTGCGTTTATTTTGTTGGTAATGTAATGAGCAGGGATAACTGTTCTGTGGGCACTGGCAGCTGCTCTTGTACCTGCAATGCAGAAGGGAAATGAGACAGCCAGAAATCTCCACATTGCGCTGAATGCATTAACTCTCGTACTCTTTGTATGGCAGATCCCCACTGGAATTGACATTGTCCTCAAAGTCTTTGAATTCACTACCTGGCCTTAATTTACTGTTAGTTCTATGTAAACTTCCTTCCCTTTTCCTCATCATTTCTTTCCACTTTCCCATCTCCCAGTTCTTGCGTACTGCAAATATTCTTAACCATCTCTTGGTATAGCCCTAGACACCCTCAACCCTGCTCTCCATTGCCTCAATCCAACTACTATCATACACAAGAACGTGGTGTCTGGCGAGCACAAGCATCGCCTTCCTCCCTCTCACTTGTATCAGATTCAGAAGTAAGTGTGTCCAATAGAATCTATCTCCTTTATTTCTTCATTGTTTGCATATTGGAGTCCTAATAATTATATTGTTAACTTTTGAAAAATAATTATATTGTTTTTTGTTTTT

mRNA sequence

CTCTCTCTCTCTCTCTGTTTCCTTTCAGCCACAACAATCTGAGCATGGCCATTACTCTCAGCCTTCCAAAACTCCCCATTATCGCTCCCATTGCTTCCTCCAAGCTTCCACTTCCCTCCATTCCAACCAAATTGCACTTCTCTCAAAACCCCAAATCTCCGCGCACTTTCTTCATTCAGAGTGTTTGTAATCTCAAACCCTATACCCTTCCCCTTACCGCTCTCACATTGCCATTCTTCCTTCATCCACAGGATGCACTTGCTGCTGGAGGGGAGTTTGGGATTTTGGAGGGAAGGTCAATTGCCCTCATCCACCCTGTTGTTATGGGTGGTCTTTTTGTCTGGACACTCTGGGCTGGCTATTTGGGCTGGCAATGGCGGCGAGTCAGGACGATTCAGAATGAAATTAATGAGCTCAAGAAGCAAGTGGTGCCTGCGGCAGTAGCCCCAGATGGGAAGCCTGTTGAGGCACCTCCATCTCCCACGGAATTGAAGATTCAGCAGCTCACAGAGGAGAGGAAAGAGCTGATCAAAGGGTCCTTCAGAGATAGACACTTCAATGCTGGTTCCATAATATTAGGATTCGGAGTTTTGGAAGCAATTGGTGGAGGCTTAAATACATGGCTTAGAACAGGAAAGCTTTTTCCAGGCCCTCATTTGTTTGCAGGAGCAGGGATAACTGTTCTGTGGGCACTGGCAGCTGCTCTTGTACCTGCAATGCAGAAGGGAAATGAGACAGCCAGAAATCTCCACATTGCGCTGAATGCATTAACTCTCGTACTCTTTGTATGGCAGATCCCCACTGGAATTGACATTGTCCTCAAAGTCTTTGAATTCACTACCTGGCCTTAATTTACTGTTAGTTCTATGTAAACTTCCTTCCCTTTTCCTCATCATTTCTTTCCACTTTCCCATCTCCCAGTTCTTGCGTACTGCAAATATTCTTAACCATCTCTTGGTATAGCCCTAGACACCCTCAACCCTGCTCTCCATTGCCTCAATCCAACTACTATCATACACAAGAACGTGGTGTCTGGCGAGCACAAGCATCGCCTTCCTCCCTCTCACTTGTATCAGATTCAGAAGTAAGTGTGTCCAATAGAATCTATCTCCTTTATTTCTTCATTGTTTGCATATTGGAGTCCTAATAATTATATTGTTAACTTTTGAAAAATAATTATATTGTTTTTTGTTTTT

Coding sequence (CDS)

ATGGCCATTACTCTCAGCCTTCCAAAACTCCCCATTATCGCTCCCATTGCTTCCTCCAAGCTTCCACTTCCCTCCATTCCAACCAAATTGCACTTCTCTCAAAACCCCAAATCTCCGCGCACTTTCTTCATTCAGAGTGTTTGTAATCTCAAACCCTATACCCTTCCCCTTACCGCTCTCACATTGCCATTCTTCCTTCATCCACAGGATGCACTTGCTGCTGGAGGGGAGTTTGGGATTTTGGAGGGAAGGTCAATTGCCCTCATCCACCCTGTTGTTATGGGTGGTCTTTTTGTCTGGACACTCTGGGCTGGCTATTTGGGCTGGCAATGGCGGCGAGTCAGGACGATTCAGAATGAAATTAATGAGCTCAAGAAGCAAGTGGTGCCTGCGGCAGTAGCCCCAGATGGGAAGCCTGTTGAGGCACCTCCATCTCCCACGGAATTGAAGATTCAGCAGCTCACAGAGGAGAGGAAAGAGCTGATCAAAGGGTCCTTCAGAGATAGACACTTCAATGCTGGTTCCATAATATTAGGATTCGGAGTTTTGGAAGCAATTGGTGGAGGCTTAAATACATGGCTTAGAACAGGAAAGCTTTTTCCAGGCCCTCATTTGTTTGCAGGAGCAGGGATAACTGTTCTGTGGGCACTGGCAGCTGCTCTTGTACCTGCAATGCAGAAGGGAAATGAGACAGCCAGAAATCTCCACATTGCGCTGAATGCATTAACTCTCGTACTCTTTGTATGGCAGATCCCCACTGGAATTGACATTGTCCTCAAAGTCTTTGAATTCACTACCTGGCCTTAA

Protein sequence

MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTALTLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNEINELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGFGVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALNALTLVLFVWQIPTGIDIVLKVFEFTTWP

Homology

[Close]

BLAST of Carg25712 vs. NCBI nr
Match: XP_022924400.1 (uncharacterized protein LOC111431909 [Cucurbita moschata] >KAG7019086.1 hypothetical protein SDJN02_20964 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 537.3 bits (1383), Expect = 7.3e-149
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTAL 60
           MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTAL
Sbjct: 1   MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTAL 60

Query: 61  TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE 120
           TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE
Sbjct: 61  TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE 120

Query: 121 INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF 180
           INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF
Sbjct: 121 INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF 180

Query: 181 GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240
           GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN
Sbjct: 181 GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240

Query: 241 ALTLVLFVWQIPTGIDIVLKVFEFTTWP 269
           ALTLVLFVWQIPTGIDIVLKVFEFTTWP
Sbjct: 241 ALTLVLFVWQIPTGIDIVLKVFEFTTWP 268

[Close]

BLAST of Carg25712 vs. NCBI nr
Match: XP_023527380.1 (uncharacterized protein LOC111790627 [Cucurbita pepo subsp. pepo] >XP_023527381.1 uncharacterized protein LOC111790627 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 530.4 bits (1365), Expect = 8.9e-147
Identity = 264/268 (98.51%), Postives = 267/268 (99.63%), Query Frame = 0


Query: 1   MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTAL 60
           MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFF+QSV NLKPYTLPLTAL
Sbjct: 1   MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFVQSVRNLKPYTLPLTAL 60

Query: 61  TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE 120
           TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE
Sbjct: 61  TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE 120

Query: 121 INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF 180
           INELKKQVVPAAVAPDGKPV+APPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF
Sbjct: 121 INELKKQVVPAAVAPDGKPVQAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF 180

Query: 181 GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240
           GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN
Sbjct: 181 GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240

Query: 241 ALTLVLFVWQIPTGIDIVLKVFEFTTWP 269
           ALTLVLFVWQIPTG+DIVLKVFEFTTWP
Sbjct: 241 ALTLVLFVWQIPTGLDIVLKVFEFTTWP 268

[Close]

BLAST of Carg25712 vs. NCBI nr
Match: XP_022979305.1 (uncharacterized protein LOC111479070 [Cucurbita maxima])

HSP 1 Score: 529.3 bits (1362), Expect = 2.0e-146
Identity = 265/268 (98.88%), Postives = 265/268 (98.88%), Query Frame = 0


Query: 1   MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTAL 60
           MAITLSLPKLPIIAPI SSKLPLPSIPTKLHFSQNPKSP TFFIQSV NLKPYTLPLTAL
Sbjct: 38  MAITLSLPKLPIIAPIGSSKLPLPSIPTKLHFSQNPKSPHTFFIQSVRNLKPYTLPLTAL 97

Query: 61  TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE 120
           TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE
Sbjct: 98  TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE 157

Query: 121 INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF 180
           INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF
Sbjct: 158 INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF 217

Query: 181 GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240
           GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN
Sbjct: 218 GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 277

Query: 241 ALTLVLFVWQIPTGIDIVLKVFEFTTWP 269
           ALTLVLFVWQIPTGIDIVLKVFEFTTWP
Sbjct: 278 ALTLVLFVWQIPTGIDIVLKVFEFTTWP 305

[Close]

BLAST of Carg25712 vs. NCBI nr
Match: KAG6582689.1 (hypothetical protein SDJN03_22691, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 492.7 bits (1267), Expect = 2.1e-135
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTAL 60
           MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTAL
Sbjct: 1   MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTAL 60

Query: 61  TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE 120
           TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE
Sbjct: 61  TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE 120

Query: 121 INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF 180
           INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF
Sbjct: 121 INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF 180

Query: 181 GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240
           GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN
Sbjct: 181 GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240

Query: 241 ALTLVLF 248
           ALTLVLF
Sbjct: 241 ALTLVLF 247

[Close]

BLAST of Carg25712 vs. NCBI nr
Match: XP_038884717.1 (uncharacterized protein LOC120075410 [Benincasa hispida])

HSP 1 Score: 486.9 bits (1252), Expect = 1.1e-133
Identity = 240/268 (89.55%), Postives = 252/268 (94.03%), Query Frame = 0


Query: 1   MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTAL 60
           MAITLSLPKLP I PI+SSKL LPSIPT L FSQNPK P+TFFIQ++ +LKPYTLPLTAL
Sbjct: 1   MAITLSLPKLPHITPISSSKLSLPSIPTNLAFSQNPKCPKTFFIQNLRSLKPYTLPLTAL 60

Query: 61  TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE 120
           TLPFFLHPQDALA GGEFGILEGRS ALIHP+VMG LFV+TLWAGYLGWQWRRVRTIQNE
Sbjct: 61  TLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGALFVYTLWAGYLGWQWRRVRTIQNE 120

Query: 121 INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF 180
           INELKKQV PAAV PDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSI+LGF
Sbjct: 121 INELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLGF 180

Query: 181 GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240
           GVLEAIGGG+NTW RTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN
Sbjct: 181 GVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240

Query: 241 ALTLVLFVWQIPTGIDIVLKVFEFTTWP 269
            L ++LF+WQIPTGIDIV KVFEFTTWP
Sbjct: 241 FLNVILFIWQIPTGIDIVFKVFEFTTWP 268

[Close]

BLAST of Carg25712 vs. ExPASy TrEMBL
Match: A0A6J1EEX0 (uncharacterized protein LOC111431909 OS=Cucurbita moschata OX=3662 GN=LOC111431909 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 3.5e-149
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTAL 60
           MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTAL
Sbjct: 1   MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTAL 60

Query: 61  TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE 120
           TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE
Sbjct: 61  TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE 120

Query: 121 INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF 180
           INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF
Sbjct: 121 INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF 180

Query: 181 GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240
           GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN
Sbjct: 181 GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240

Query: 241 ALTLVLFVWQIPTGIDIVLKVFEFTTWP 269
           ALTLVLFVWQIPTGIDIVLKVFEFTTWP
Sbjct: 241 ALTLVLFVWQIPTGIDIVLKVFEFTTWP 268

[Close]

BLAST of Carg25712 vs. ExPASy TrEMBL
Match: A0A6J1ISV5 (uncharacterized protein LOC111479070 OS=Cucurbita maxima OX=3661 GN=LOC111479070 PE=4 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 9.7e-147
Identity = 265/268 (98.88%), Postives = 265/268 (98.88%), Query Frame = 0


Query: 1   MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTAL 60
           MAITLSLPKLPIIAPI SSKLPLPSIPTKLHFSQNPKSP TFFIQSV NLKPYTLPLTAL
Sbjct: 38  MAITLSLPKLPIIAPIGSSKLPLPSIPTKLHFSQNPKSPHTFFIQSVRNLKPYTLPLTAL 97

Query: 61  TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE 120
           TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE
Sbjct: 98  TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE 157

Query: 121 INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF 180
           INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF
Sbjct: 158 INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF 217

Query: 181 GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240
           GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN
Sbjct: 218 GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 277

Query: 241 ALTLVLFVWQIPTGIDIVLKVFEFTTWP 269
           ALTLVLFVWQIPTGIDIVLKVFEFTTWP
Sbjct: 278 ALTLVLFVWQIPTGIDIVLKVFEFTTWP 305

[Close]

BLAST of Carg25712 vs. ExPASy TrEMBL
Match: A0A5D3DB32 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00790 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 5.1e-132
Identity = 237/268 (88.43%), Postives = 248/268 (92.54%), Query Frame = 0


Query: 1   MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTAL 60
           MAITLSLPKLP   PI+SSKLP+PSIPT L  SQNPK     FIQ+V NLKPYT+PLTAL
Sbjct: 1   MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVHNLKPYTIPLTAL 60

Query: 61  TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE 120
           TLPFFLHPQDALA GGEFGILEGRS ALIHP+VMGGLFV+TLWAGYLGWQWRRVRTIQNE
Sbjct: 61  TLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTIQNE 120

Query: 121 INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF 180
           INELKKQV PAAV PDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSI+LGF
Sbjct: 121 INELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLGF 180

Query: 181 GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240
           GVLEAIGGG+NTW RTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN
Sbjct: 181 GVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240

Query: 241 ALTLVLFVWQIPTGIDIVLKVFEFTTWP 269
           AL ++LF+WQIPTGIDIV KVFEFT WP
Sbjct: 241 ALNVILFIWQIPTGIDIVFKVFEFTKWP 268

[Close]

BLAST of Carg25712 vs. ExPASy TrEMBL
Match: A0A1S3AUZ2 (uncharacterized protein LOC103483159 OS=Cucumis melo OX=3656 GN=LOC103483159 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 5.1e-132
Identity = 237/268 (88.43%), Postives = 248/268 (92.54%), Query Frame = 0


Query: 1   MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTAL 60
           MAITLSLPKLP   PI+SSKLP+PSIPT L  SQNPK     FIQ+V NLKPYT+PLTAL
Sbjct: 1   MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVHNLKPYTIPLTAL 60

Query: 61  TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE 120
           TLPFFLHPQDALA GGEFGILEGRS ALIHP+VMGGLFV+TLWAGYLGWQWRRVRTIQNE
Sbjct: 61  TLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTIQNE 120

Query: 121 INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF 180
           INELKKQV PAAV PDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSI+LGF
Sbjct: 121 INELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLGF 180

Query: 181 GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240
           GVLEAIGGG+NTW RTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN
Sbjct: 181 GVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240

Query: 241 ALTLVLFVWQIPTGIDIVLKVFEFTTWP 269
           AL ++LF+WQIPTGIDIV KVFEFT WP
Sbjct: 241 ALNVILFIWQIPTGIDIVFKVFEFTKWP 268

[Close]

BLAST of Carg25712 vs. ExPASy TrEMBL
Match: A0A0A0L3S2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119320 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.1e-131
Identity = 236/268 (88.06%), Postives = 248/268 (92.54%), Query Frame = 0


Query: 1   MAITLSLPKLPIIAPIASSKLPLPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTAL 60
           MAITLSLPKLP   PI+SSKLP+PSIPT L  SQNPK     FIQ+V NLKPYT+PLTAL
Sbjct: 1   MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVQNLKPYTIPLTAL 60

Query: 61  TLPFFLHPQDALAAGGEFGILEGRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNE 120
           TLPFFLHPQDALA GGEFGILEGRS ALIHP+VMGGLFV+TLWAGYLGWQWRRVRT+QNE
Sbjct: 61  TLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTVQNE 120

Query: 121 INELKKQVVPAAVAPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGF 180
           INELKKQV PAAV PDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSI+LGF
Sbjct: 121 INELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLGF 180

Query: 181 GVLEAIGGGLNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240
           GVLEAIGGG+NTW RTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN
Sbjct: 181 GVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240

Query: 241 ALTLVLFVWQIPTGIDIVLKVFEFTTWP 269
            L ++LF+WQIPTGIDIVLKVFEFT WP
Sbjct: 241 TLNVLLFIWQIPTGIDIVLKVFEFTKWP 268

[Close]

BLAST of Carg25712 vs. TAIR 10
Match: AT3G61870.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). )

HSP 1 Score: 355.5 bits (911), Expect = 3.7e-98
Identity = 175/249 (70.28%), Postives = 208/249 (83.53%), Query Frame = 0


Query: 23  LPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTALTLPFFLHPQDALAAGGEFGILE 82
           L  I TK    + P+ P T    ++  LK  +LPL  + LPFFL PQDA AAGGEFGILE
Sbjct: 26  LKPITTKSQPCKTPEIPST--PNALQLLKSSSLPLAVIALPFFLDPQDAAAAGGEFGILE 85

Query: 83  GRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNEINELKKQVVPAAVAPDGKPV-- 142
           GRS ALIHP+VMGGLF +TLW GYLGWQWRRVRTIQ+EI++LKKQ+ P  V+PDG     
Sbjct: 86  GRSFALIHPIVMGGLFAYTLWTGYLGWQWRRVRTIQSEISDLKKQLKPTPVSPDGSTAVD 145

Query: 143 -EAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGFGVLEAIGGGLNTWLRTGKL 202
             +PPS TEL+IQ+LTEERKEL+KGS+RD+HF+AGS++LGFGVLEA+ GG+NT+LRTGKL
Sbjct: 146 SSSPPSTTELQIQRLTEERKELVKGSYRDKHFDAGSVLLGFGVLEAVFGGVNTYLRTGKL 205

Query: 203 FPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALNALTLVLFVWQIPTGIDIVL 262
           FPGPHL+AGAGITVLWA AAALVPAMQKGN+TAR+LHIALNA+ ++LF+WQIPTG+DIVL
Sbjct: 206 FPGPHLYAGAGITVLWAAAAALVPAMQKGNDTARSLHIALNAVNVLLFIWQIPTGLDIVL 265

Query: 263 KVFEFTTWP 269
           KVFEFT WP
Sbjct: 266 KVFEFTKWP 272

[Close]

BLAST of Carg25712 vs. TAIR 10
Match: AT3G61870.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 256.5 bits (654), Expect = 2.3e-68
Identity = 127/191 (66.49%), Postives = 153/191 (80.10%), Query Frame = 0


Query: 23  LPSIPTKLHFSQNPKSPRTFFIQSVCNLKPYTLPLTALTLPFFLHPQDALAAGGEFGILE 82
           L  I TK    + P+ P T    ++  LK  +LPL  + LPFFL PQDA AAGGEFGILE
Sbjct: 26  LKPITTKSQPCKTPEIPST--PNALQLLKSSSLPLAVIALPFFLDPQDAAAAGGEFGILE 85

Query: 83  GRSIALIHPVVMGGLFVWTLWAGYLGWQWRRVRTIQNEINELKKQVVPAAVAPDGKPV-- 142
           GRS ALIHP+VMGGLF +TLW GYLGWQWRRVRTIQ+EI++LKKQ+ P  V+PDG     
Sbjct: 86  GRSFALIHPIVMGGLFAYTLWTGYLGWQWRRVRTIQSEISDLKKQLKPTPVSPDGSTAVD 145

Query: 143 -EAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIILGFGVLEAIGGGLNTWLRTGKL 202
             +PPS TEL+IQ+LTEERKEL+KGS+RD+HF+AGS++LGFGVLEA+ GG+NT+LRTGKL
Sbjct: 146 SSSPPSTTELQIQRLTEERKELVKGSYRDKHFDAGSVLLGFGVLEAVFGGVNTYLRTGKL 205

Query: 203 FPGPHLFAGAG 211
           FPGPHL+AGAG
Sbjct: 206 FPGPHLYAGAG 214

The following BLAST results are available for this feature:

BLAST of Carg25712 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924400.1	7.3e-149	100.00	uncharacterized protein LOC111431909 [Cucurbita moschata] >KAG7019086.1 hypothet...	[more]
XP_023527380.1	8.9e-147	98.51	uncharacterized protein LOC111790627 [Cucurbita pepo subsp. pepo] >XP_023527381....	[more]
XP_022979305.1	2.0e-146	98.88	uncharacterized protein LOC111479070 [Cucurbita maxima]	[more]
KAG6582689.1	2.1e-135	100.00	hypothetical protein SDJN03_22691, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038884717.1	1.1e-133	89.55	uncharacterized protein LOC120075410 [Benincasa hispida]	[more]

BLAST of Carg25712 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg25712 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EEX0	3.5e-149	100.00	uncharacterized protein LOC111431909 OS=Cucurbita moschata OX=3662 GN=LOC1114319...	[more]
A0A6J1ISV5	9.7e-147	98.88	uncharacterized protein LOC111479070 OS=Cucurbita maxima OX=3661 GN=LOC111479070...	[more]
A0A5D3DB32	5.1e-132	88.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AUZ2	5.1e-132	88.43	uncharacterized protein LOC103483159 OS=Cucumis melo OX=3656 GN=LOC103483159 PE=...	[more]
A0A0A0L3S2	1.1e-131	88.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119320 PE=4 SV=1	[more]

BLAST of Carg25712 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61870.1	3.7e-98	70.28	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G61870.2	2.3e-68	66.49	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025067	Protein of unknown function DUF4079	PFAM	PF13301	DUF4079	coord: 87..261 e-value: 6.2E-52 score: 175.5
None	No IPR available	PANTHER	PTHR34679	FAMILY NOT NAMED	coord: 1..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25712-RA	Carg25712-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane