Carg25705 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25705
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	dof zinc finger protein 2-like
Location	Carg_Chr14: 14729236 .. 14729754 (+)
RNA-Seq Expression	Carg25705
Synteny	Carg25705

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCCATGATGCAATCCGGCAGCGGCGGCGGCGGCGGCGGCGGAGGCGGCGGTGGAGGAGGCTTCAAGGCCAAGGGAAGGCCACAAGAGCAATTGAACTGCCCAAGGTGCAAGTCGACCAACACAAAATTCTGCTACTACAATAACTACAGCCTCACACAGCCGAGGTATTTTTGCAAATCTTGCCGCCGGTATTGGACCGAGGGCGGTTCTCTTAGGAACATCCCTGTCGGAGGAGGCTCCCGGAAGAATCGTAAACCGCCGGCTTCGGTTACCGGGTCAGCTTCGGCCAACCACGCGCCGCCGCAGCAGGTATACCAAGCCCATGATCTGAACTTGGGTTTTCCGACGACGACGGCGGCGGCGGCGGCGGCGGGGATAGAAAACGGCGGGCACGGAGGATTTGGATTTTACATACCGAATTTGATGCCGTATCCGGCCCGAGACACGGCGGTGGAAGAGAATCCTGGTAGTAATGGGTATTGGAATGGGATGTTTAGTGGAGGGCCATGGTAG

mRNA sequence

ATGGAGGCCATGATGCAATCCGGCAGCGGCGGCGGCGGCGGCGGCGGAGGCGGCGGTGGAGGAGGCTTCAAGGCCAAGGGAAGGCCACAAGAGCAATTGAACTGCCCAAGGTGCAAGTCGACCAACACAAAATTCTGCTACTACAATAACTACAGCCTCACACAGCCGAGGTATTTTTGCAAATCTTGCCGCCGGTATTGGACCGAGGGCGGTTCTCTTAGGAACATCCCTGTCGGAGGAGGCTCCCGGAAGAATCGTAAACCGCCGGCTTCGGTTACCGGGTCAGCTTCGGCCAACCACGCGCCGCCGCAGCAGGTATACCAAGCCCATGATCTGAACTTGGGTTTTCCGACGACGACGGCGGCGGCGGCGGCGGCGGGGATAGAAAACGGCGGGCACGGAGGATTTGGATTTTACATACCGAATTTGATGCCGTATCCGGCCCGAGACACGGCGGTGGAAGAGAATCCTGGTAGTAATGGGTATTGGAATGGGATGTTTAGTGGAGGGCCATGGTAG

Coding sequence (CDS)

ATGGAGGCCATGATGCAATCCGGCAGCGGCGGCGGCGGCGGCGGCGGAGGCGGCGGTGGAGGAGGCTTCAAGGCCAAGGGAAGGCCACAAGAGCAATTGAACTGCCCAAGGTGCAAGTCGACCAACACAAAATTCTGCTACTACAATAACTACAGCCTCACACAGCCGAGGTATTTTTGCAAATCTTGCCGCCGGTATTGGACCGAGGGCGGTTCTCTTAGGAACATCCCTGTCGGAGGAGGCTCCCGGAAGAATCGTAAACCGCCGGCTTCGGTTACCGGGTCAGCTTCGGCCAACCACGCGCCGCCGCAGCAGGTATACCAAGCCCATGATCTGAACTTGGGTTTTCCGACGACGACGGCGGCGGCGGCGGCGGCGGGGATAGAAAACGGCGGGCACGGAGGATTTGGATTTTACATACCGAATTTGATGCCGTATCCGGCCCGAGACACGGCGGTGGAAGAGAATCCTGGTAGTAATGGGTATTGGAATGGGATGTTTAGTGGAGGGCCATGGTAG

Protein sequence

MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTTAAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW

Homology

[Close]

BLAST of Carg25705 vs. NCBI nr
Match: KAG7019080.1 (Dof zinc finger protein DOF3.7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 359.8 bits (922), Expect = 1.3e-95
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60
           MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC
Sbjct: 1   MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60

Query: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT 120
           KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT
Sbjct: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT 120

Query: 121 AAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW 173
           AAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW
Sbjct: 121 AAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW 172

[Close]

BLAST of Carg25705 vs. NCBI nr
Match: KAG6582682.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355.1 bits (910), Expect = 3.3e-94
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60
           MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC
Sbjct: 1   MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60

Query: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT 120
           KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT
Sbjct: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT 120

Query: 121 -AAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW 173
            AAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW
Sbjct: 121 AAAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW 173

[Close]

BLAST of Carg25705 vs. NCBI nr
Match: XP_022924713.1 (dof zinc finger protein 2-like [Cucurbita moschata])

HSP 1 Score: 346.7 bits (888), Expect = 1.2e-91
Identity = 166/172 (96.51%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60
           MEAMMQSGS      GGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC
Sbjct: 1   MEAMMQSGS------GGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60

Query: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT 120
           KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT
Sbjct: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT 120

Query: 121 AAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW 173
           AAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW
Sbjct: 121 AAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW 166

[Close]

BLAST of Carg25705 vs. NCBI nr
Match: XP_023527390.1 (dof zinc finger protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.6 bits (854), Expect = 1.0e-87
Identity = 163/175 (93.14%), Postives = 164/175 (93.71%), Query Frame = 0


Query: 1   MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60
           MEAMM SGS    G GGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC
Sbjct: 1   MEAMMHSGS----GSGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60

Query: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT 120
           KSCRRYWTEGGSLRNIPVGGGSRKNRKP ASVTGSASANHAPPQ VYQAHDLNLGFPTTT
Sbjct: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPAASVTGSASANHAPPQPVYQAHDLNLGFPTTT 120

Query: 121 ---AAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW 173
              AAAA+AGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW
Sbjct: 121 TTAAAAASAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW 171

[Close]

BLAST of Carg25705 vs. NCBI nr
Match: XP_022980851.1 (dof zinc finger protein 2-like [Cucurbita maxima])

HSP 1 Score: 333.6 bits (854), Expect = 1.0e-87
Identity = 167/176 (94.89%), Postives = 167/176 (94.89%), Query Frame = 0


Query: 1   MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60
           MEAMMQSGS G GGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC
Sbjct: 1   MEAMMQSGS-GSGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60

Query: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT 120
           KSCRRYWTEGGSLRNIPVGGGSRKNRKP ASVTGSASANHA PQ VYQAHDLNLGFPTTT
Sbjct: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPAASVTGSASANHA-PQPVYQAHDLNLGFPTTT 120

Query: 121 ----AAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW 173
               AAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW
Sbjct: 121 TTTAAAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW 174

[Close]

BLAST of Carg25705 vs. ExPASy Swiss-Prot
Match: B9F1L8 (Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.8e-30
Identity = 78/173 (45.09%), Postives = 100/173 (57.80%), Query Frame = 0


Query: 7   SGSGGGGGGGGGGGGGFKAKGRPQEQ--LNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCR 66
           +     G G  G G G + + RPQ++  LNCPRC STNTKFCYYNNYSL QPRYFCK+CR
Sbjct: 52  AAGAAAGAGAAGAGAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCR 111

Query: 67  RYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAP----------------PQQVYQ 126
           RYWTEGGSLRN+PVGGGSRKN++  +SV  SA+A+ +                 P+ +++
Sbjct: 112 RYWTEGGSLRNVPVGGGSRKNKRSSSSVVPSAAASASTSAAVSGSVPVGLAAKNPKLMHE 171

Query: 127 -AHDLNLGFPTTTAAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSN 161
            A DLNL FP               H G     P    +P+ +++   NPG N
Sbjct: 172 GAQDLNLAFP--------------HHHGRALQPPEFTAFPSLESSSVCNPGGN 210

[Close]

BLAST of Carg25705 vs. ExPASy Swiss-Prot
Match: Q9SXG8 (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.0e-29
Identity = 80/178 (44.94%), Postives = 105/178 (58.99%), Query Frame = 0


Query: 10  GGGGGG-----GGGGGGGFKAKGRPQEQ--LNCPRCKSTNTKFCYYNNYSLTQPRYFCKS 69
           GGGGGG     GG G G  + + RPQ++  LNCPRC STNTKFCYYNNYSL QPRYFCK+
Sbjct: 48  GGGGGGAPPVAGGAGAGSTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKT 107

Query: 70  CRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTTAA 129
           CRRYWTEGGSLRN+PVGGGSRKN++  +S   ++ A+ +    V  +  +++   +T   
Sbjct: 108 CRRYWTEGGSLRNVPVGGGSRKNKRSSSSAASASPASASTANSVVTSASMSMSMASTGGG 167

Query: 130 AAAAG--IENGG--------HGGFGFYIPNLMP-YPARDTAVEENPGSNGYWNGMFSG 170
           A+     +  G         H G G   P   P +P+ +++   NPG     NG   G
Sbjct: 168 ASKNPKLVHEGAQDLNLAFPHHG-GLQAPGEFPAFPSLESSSVCNPGGPMGTNGRGGG 224

[Close]

BLAST of Carg25705 vs. ExPASy Swiss-Prot
Match: Q9ZPY0 (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV=3)

HSP 1 Score: 128.6 bits (322), Expect = 6.6e-29
Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 26  KGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKN 85
           K RPQE+LNCPRC STNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN
Sbjct: 73  KARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 132

Query: 86  RKPPAS 92
           ++  +S
Sbjct: 133 KRSSSS 138

[Close]

BLAST of Carg25705 vs. ExPASy Swiss-Prot
Match: Q9M161 (Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-28
Identity = 61/98 (62.24%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 28  RPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 87
           RPQE  NCPRC S+NTKFCYYNNYSL QPRY CKSCRRYWTEGGSLRN+PVGGGSRKN+K
Sbjct: 63  RPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKK 122

Query: 88  PPASVTGSASANHAPPQQVYQAHDLNLGFPTTTAAAAA 126
            P   + ++S+    P       DLN  F  T++A+++
Sbjct: 123 LPFPNSSTSSSTKNLP-------DLNPPFVFTSSASSS 153

[Close]

BLAST of Carg25705 vs. ExPASy Swiss-Prot
Match: Q8LAP8 (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-27
Identity = 59/86 (68.60%), Postives = 67/86 (77.91%), Query Frame = 0


Query: 20  GGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVG 79
           GG  KA+    + +NCPRC STNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNIPVG
Sbjct: 40  GGERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVG 99

Query: 80  GGSRKNRKPPASVTGSASANHAPPQQ 106
           GGSRKN++  +S +   S NH+   Q
Sbjct: 100 GGSRKNKRSHSS-SSDISNNHSDSTQ 124

[Close]

BLAST of Carg25705 vs. ExPASy TrEMBL
Match: A0A6J1ED97 (dof zinc finger protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111432129 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 5.7e-92
Identity = 166/172 (96.51%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60
           MEAMMQSGS      GGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC
Sbjct: 1   MEAMMQSGS------GGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60

Query: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT 120
           KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT
Sbjct: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT 120

Query: 121 AAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW 173
           AAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW
Sbjct: 121 AAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW 166

[Close]

BLAST of Carg25705 vs. ExPASy TrEMBL
Match: A0A6J1IUS0 (dof zinc finger protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111480120 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.0e-88
Identity = 167/176 (94.89%), Postives = 167/176 (94.89%), Query Frame = 0


Query: 1   MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60
           MEAMMQSGS G GGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC
Sbjct: 1   MEAMMQSGS-GSGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60

Query: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT 120
           KSCRRYWTEGGSLRNIPVGGGSRKNRKP ASVTGSASANHA PQ VYQAHDLNLGFPTTT
Sbjct: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPAASVTGSASANHA-PQPVYQAHDLNLGFPTTT 120

Query: 121 ----AAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW 173
               AAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW
Sbjct: 121 TTTAAAAAAAGIENGGHGGFGFYIPNLMPYPARDTAVEENPGSNGYWNGMFSGGPW 174

[Close]

BLAST of Carg25705 vs. ExPASy TrEMBL
Match: A0A5A7U0P5 (Dof zinc finger protein DOF3.7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00870 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.2e-70
Identity = 140/175 (80.00%), Postives = 148/175 (84.57%), Query Frame = 0


Query: 1   MEAMMQSG--SGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRY 60
           MEAMM+SG   GGGGGGGGGGGGG K KGRPQEQLNCPRCKS+NTKFCYYNNYSLTQPRY
Sbjct: 1   MEAMMESGGNGGGGGGGGGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRY 60

Query: 61  FCKSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQ-QVYQAHDLNLGFP 120
           FCK+CRRYWTEGGSLRNIPVGGGSRKNRKP  SV+GS S +H  PQ QVYQA DLNLGF 
Sbjct: 61  FCKACRRYWTEGGSLRNIPVGGGSRKNRKPTGSVSGSGSVHHPQPQPQVYQAQDLNLGFA 120

Query: 121 TTTAAAAAAGIENGGHGGFGFYIPNLMPYPARDT-AVEENPGSNGYWNGMFSGGP 172
           T   A A   +ENGGHGGFG YIPNLMPY  R+T AVEEN G+NGYWNGMF GGP
Sbjct: 121 T---AEATTAMENGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGP 172

[Close]

BLAST of Carg25705 vs. ExPASy TrEMBL
Match: A0A1S4DT96 (dof zinc finger protein DOF3.7 OS=Cucumis melo OX=3656 GN=LOC103483169 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.2e-70
Identity = 140/175 (80.00%), Postives = 148/175 (84.57%), Query Frame = 0


Query: 1   MEAMMQSG--SGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRY 60
           MEAMM+SG   GGGGGGGGGGGGG K KGRPQEQLNCPRCKS+NTKFCYYNNYSLTQPRY
Sbjct: 1   MEAMMESGGNGGGGGGGGGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRY 60

Query: 61  FCKSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQ-QVYQAHDLNLGFP 120
           FCK+CRRYWTEGGSLRNIPVGGGSRKNRKP  SV+GS S +H  PQ QVYQA DLNLGF 
Sbjct: 61  FCKACRRYWTEGGSLRNIPVGGGSRKNRKPTGSVSGSGSVHHPQPQPQVYQAQDLNLGFA 120

Query: 121 TTTAAAAAAGIENGGHGGFGFYIPNLMPYPARDT-AVEENPGSNGYWNGMFSGGP 172
           T   A A   +ENGGHGGFG YIPNLMPY  R+T AVEEN G+NGYWNGMF GGP
Sbjct: 121 T---AEATTAMENGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGP 172

[Close]

BLAST of Carg25705 vs. ExPASy TrEMBL
Match: A0A0A0L5U8 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119420 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.7e-70
Identity = 138/173 (79.77%), Postives = 147/173 (84.97%), Query Frame = 0


Query: 1   MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60
           MEAMM+SG+   GGGGGGGGGG K KGRPQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFC
Sbjct: 1   MEAMMESGA--NGGGGGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFC 60

Query: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQ-QVYQAHDLNLGFPTT 120
           KSCRRYWTEGGSLRNIPVGGGSRKNRKP  SV+GS S +H  PQ QVYQA DLNLGF TT
Sbjct: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGSGSVHHPQPQPQVYQAQDLNLGFATT 120

Query: 121 TAAAAAAGIENGGHGGFGFYIPNLMPYPARDT-AVEENPGSNGYWNGMFSGGP 172
             A A   ++NGGHGGFG YIPNLMPY  R+T AVEEN G+NGYWNGMF GGP
Sbjct: 121 --AEATTAMDNGGHGGFGCYIPNLMPYSGRETAAVEENSGNNGYWNGMFGGGP 169

[Close]

BLAST of Carg25705 vs. TAIR 10
Match: AT2G46590.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 128.6 bits (322), Expect = 4.7e-30
Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 26  KGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKN 85
           K RPQE+LNCPRC STNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN
Sbjct: 61  KARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 120

Query: 86  RKPPAS 92
           ++  +S
Sbjct: 121 KRSSSS 126

[Close]

BLAST of Carg25705 vs. TAIR 10
Match: AT2G46590.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 128.6 bits (322), Expect = 4.7e-30
Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 26  KGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKN 85
           K RPQE+LNCPRC STNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN
Sbjct: 73  KARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 132

Query: 86  RKPPAS 92
           ++  +S
Sbjct: 133 KRSSSS 138

[Close]

BLAST of Carg25705 vs. TAIR 10
Match: AT4G00940.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 127.9 bits (320), Expect = 8.0e-30
Identity = 61/98 (62.24%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 28  RPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 87
           RPQE  NCPRC S+NTKFCYYNNYSL QPRY CKSCRRYWTEGGSLRN+PVGGGSRKN+K
Sbjct: 63  RPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKK 122

Query: 88  PPASVTGSASANHAPPQQVYQAHDLNLGFPTTTAAAAA 126
            P   + ++S+    P       DLN  F  T++A+++
Sbjct: 123 LPFPNSSTSSSTKNLP-------DLNPPFVFTSSASSS 153

[Close]

BLAST of Carg25705 vs. TAIR 10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28
Identity = 59/86 (68.60%), Postives = 67/86 (77.91%), Query Frame = 0


Query: 20  GGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVG 79
           GG  KA+    + +NCPRC STNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNIPVG
Sbjct: 40  GGERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVG 99

Query: 80  GGSRKNRKPPASVTGSASANHAPPQQ 106
           GGSRKN++  +S +   S NH+   Q
Sbjct: 100 GGSRKNKRSHSS-SSDISNNHSDSTQ 124

[Close]

BLAST of Carg25705 vs. TAIR 10
Match: AT5G62940.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-27
Identity = 59/118 (50.00%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 21  GGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGG 80
           GG + +        CPRC+ST+TKFCYYNNYSL+QPRYFCK+CRRYWT+GG+LRNIPVGG
Sbjct: 61  GGRRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGG 120

Query: 81  GSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTTAAAAAAGIENGGHGGFGF 139
           G RKN+KP +S + S++++   P  +  A+       T+   A A   +N  H   GF
Sbjct: 121 GCRKNKKPSSSNSSSSTSSGKKPSNIVTAN-------TSDLMALAHSHQNYQHSPLGF 171

The following BLAST results are available for this feature:

BLAST of Carg25705 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019080.1	1.3e-95	100.00	Dof zinc finger protein DOF3.7, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
KAG6582682.1	3.3e-94	99.42	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022924713.1	1.2e-91	96.51	dof zinc finger protein 2-like [Cucurbita moschata]	[more]
XP_023527390.1	1.0e-87	93.14	dof zinc finger protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022980851.1	1.0e-87	94.89	dof zinc finger protein 2-like [Cucurbita maxima]	[more]

BLAST of Carg25705 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9F1L8	7.8e-30	45.09	Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 ...	[more]
Q9SXG8	1.0e-29	44.94	Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ...	[more]
Q9ZPY0	6.6e-29	83.33	Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV...	[more]
Q9M161	1.1e-28	62.24	Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV...	[more]
Q8LAP8	1.6e-27	68.60	Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV...	[more]

BLAST of Carg25705 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ED97	5.7e-92	96.51	dof zinc finger protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111432129 PE=...	[more]
A0A6J1IUS0	5.0e-88	94.89	dof zinc finger protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111480120 PE=4 ...	[more]
A0A5A7U0P5	1.2e-70	80.00	Dof zinc finger protein DOF3.7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S4DT96	1.2e-70	80.00	dof zinc finger protein DOF3.7 OS=Cucumis melo OX=3656 GN=LOC103483169 PE=4 SV=1	[more]
A0A0A0L5U8	4.7e-70	79.77	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119420 PE...	[more]

BLAST of Carg25705 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46590.1	4.7e-30	83.33	Dof-type zinc finger DNA-binding family protein	[more]
AT2G46590.2	4.7e-30	83.33	Dof-type zinc finger DNA-binding family protein	[more]
AT4G00940.1	8.0e-30	62.24	Dof-type zinc finger DNA-binding family protein	[more]
AT4G24060.1	1.2e-28	68.60	Dof-type zinc finger DNA-binding family protein	[more]
AT5G62940.1	2.2e-27	50.00	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 31..87 e-value: 5.0E-33 score: 113.1
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 35..71
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 33..87 score: 28.93782
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..101
None	No IPR available	PANTHER	PTHR31992:SF223	DOF ZINC FINGER PROTEIN DOF2.5	coord: 25..106
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 25..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25705-RA	Carg25705-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding