Carg25677 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25677
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger CCCH domain-containing protein 53-like isoform X2
Location	Carg_Chr04: 1459784 .. 1462973 (-)
RNA-Seq Expression	Carg25677
Synteny	Carg25677

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTATCTCTCTCGGGGGATTGTTTTTTGATTCAAAGGAGAGAGAAAGTTAGAGAGAGAAAGCTCTGATTGAAAAAAATGGCAGACTAGTAGCAGCAGCAGCAGCGAAGTTGCAGGTTTTTTTTTTGAAACAAACCCAAATCATGGCTATCTTCTTCTTCCGACGTTGAAAACCCAGTTCATCTAAAGGCGGTGGTTTGGCTTTTATGGTAAAACTTTGACCTTATCTCTTTAGAAATCTTCATGAACTACTGAAAGATTTCATCTTGTTCTTGTTGTTCTTGTTCTTGCTCTGTTTGTATTTTTCTTTCTTTTGGGTGTTTTCCCTTTAACGAAGGCAAGCTCTGTTCTGTTCTTTTCTTTTCTTTTCTTTTCATCTAACGCACACGGGAATACTTCTTGGGGCACCAAACTTTCTCTTTTTGCTCTTCTTTTTTCTCTCAACGTTCCCTTTTCTTTACCTCTTTTTTGGGCATGTTCTTTCAGGGAGAAGCTTTTCAGAAAAAACAGAGACTGAACTGAAGCTACGCGATATTTGTTTGTGGGTGTGATCCTGTTTTTTTGTATCTCTGTTTTTTTCCCTCTCGCATCATGGATTCTTATGAAGCAACAAGGATTGTGTTCTCTAGGATCCAGAATTTGGACCCTGAAAATGCTTCCAAAATCATGGGGTTTCTTTTGATTCAAGACCATGGAGAGAAGGAGATGATTAGATTGGCCTTTGGCCCTGAAGCTCTGCTTCACTCTGTTATTCTTAAGACTAGGAAGGATTTGGGTCTTCCGTCCACGAACTCGCCGTCCACGACGAGTTCTTCGCCGTCTCCGTTTAGTCTTTCGAGGCAGAGTTCTTCTACTTCTTCTTCGAGGTTTGGAATTAATCTTCCTCCTTCACTTACGATTCCGAGTCCTTCTTCCAGTTCTGTTTCGTGGGCTACTGGTTTTTCGCCTGAGCTTCAAAATTCGGATGATCATTTGATTAGTCCGGGGAATTTACCACTTGGGTCGTCGTGTTTTAGTGCTGGAGAAGCTCCGGTGACTGATATGATTGATGAGTTTCAACTTCAGGACCAGCTTTCGTTTCTCAACGAGGGTTCTCCGACCATCGGCGTTAAGAATTCCGACTTGTTTTTCCCTCCGGTGGACTTGTCTTCGAGTCCCACCGGCGGTGGGTTTGGTTCCTATGGTGGAGATGGTACCTGGAGTGGAGGGGTAGTCCACCGCCGGAGCTACTCTGTTAACGATGCCAGTTTGGGAACAGAGGATTTGAATAGTGGGTTGGGTTGGAAGCCTTGTCTTTACTACGCTAGAGGGTTTTGTAAGAATGGAACCAGCTGCCGGTTTCTCCACAGCGGTCTTGGAGACGCCGACGGCGGCGGCGCCGCCGTCGGCTCGCCGAGTAAGATCGAAATGATGGACCAGTGCCATGAGCTTTTCAGATCCAAATCCTCTGCTCAGCAGCGCCTCGCCGCCGCTTCTCAGCTCATGGCCTCTGCTAATGCCTTCCCTTACTCTCCCAAATCCATCAATTTCCTTCTCCAACAACAACAAAGCGATTCCCAGAGGTATAATTTCTTCTTTTCGTGAAGAATGCCATGTAATTACTACTGAAAAGTCTCATTTCTAAACTCCTCTGTTTGCAGAGCCGCCGCTGCGGCCCTGATAATGGGCGAAGATCTTCACAAATTCAGCCGGTCCGGCCGCTTGGAGCGCAACGAGTTCTCATTGAATGGCAGCGCCGGTATTGTCAATCCAGCTTCAAGACAGATCTACTTAACATTCCCAGCCGACAGCACCTTTAAGGAAGAAGATGTATCGAATTATTTCAGGTTTCTTCACTAACCAAATTATCCATTTTGTTCTTCTTATACTTCCATGTCTGAAAGTTCTTGTTTTTGATGAAGCATGTACGGTCCAGTTCAAGATGTGAGAATCCCATATCAACAGAAGAGAATGTTTGGATTTGTCACTTTTGTTTATCCTGAAACAGTGAAGCTCATTTTGGCTAAAGGGAATCCTCATTTTGTTTGTGATGCTCGTGTTCTTGTTAAACCATACAAGGAAAAAGGCAAAGTCCCAGACAAGTACAGGCACTCTCTGTTCTTTACTCTGTTTTTGCTCTGTTTTTTCACTCTGTTTTTACTCTGTTTCTTTGGGATTTTTCGTAAGAATTTTGATTTGTTCTACAGGAAACAGCAGCAAATCGATAGAGATTTCTCCCCTTGTGGAACACCAACTGGGTTGGATTCAAGAGAGCTCTACGATCATCTTCAACTCGGCTCAAGAATGTTCTACAATTCTCAGCAGGATCTGCTTCTGCGGAGGAAACTGGAAAAACAGCAAGCTGATATTGATCTTCAAAGTCGACGCCTTCTGAATCTACAGCTTCTTGACGTGAAGAAAAACCAGCTCCCTCACCCTTACAACCACCACCGTGCTTTCTCCCCCGGCAGCCCGATTCCTTCCCCGACGCATTCTCCGAACCCGTTTGCTCAAAATCTCATCTTCCCCACCATTCGTAGTGCTAGCAGCTGCAGCAATTCTGATATCTTAAGAGGTGAGGTTCATAATCAATCACCATTGATGAATCAATCTCTTATCAGCTTATGTAACTGAACTTTGTTTGCAGAGAATGGCCCTACGCCACCGCCCGTTACGATCGTATCTTCAACCGATATGCCTCGGCAGCTATCGCCACCGGCAAACGAATTCTCTGTCCATGACAAGGAGACATCCCAAAATGATGACATTGATTTACTTGAATGGTAATAACAATAAACCATTTACATTACTCCAATTTAGACATCCCAATTCATTACTCAGATTATGTGTTATAAAACGACCATTACAGTTTCGAACACAACCTCCCGGATAGTCCCTTTGCATCACCAGCAAAAGCCACCGGCGGCGAACATGCAGCAAACGACTCCGACGACGCCGACGCCAACCCCGAGTCGAATCTCACATCAACTTCCTCTCTGGAAGTAGCAGCATCCTTCAAATCCTACAATTGCCAAATGCCAAGGTCAGCACTAAACCAACCAACCAAACAACCAAACAAACAATCAACACCTTAGAGTACTCTCACAATCCATTAAACTAAACAACAATCACTCTACAGGTTCCCATCGAGCCACGGATCGATCGGAATGTACGTAGGGACAGGCGGGCCGACATGTCCCGTGGGGATTTAG

mRNA sequence

CTCTATCTCTCTCGGGGGATTGTTTTTTGATTCAAAGGAGAGAGAAAGTTAGAGAGAGAAAGCTCTGATTGAAAAAAATGGCAGACTAGTAGCAGCAGCAGCAGCGAAGTTGCAGGTTTTTTTTTTGAAACAAACCCAAATCATGGCTATCTTCTTCTTCCGACGTTGAAAACCCAGTTCATCTAAAGGCGGTGGTTTGGCTTTTATGGGAGAAGCTTTTCAGAAAAAACAGAGACTGAACTGAAGCTACGCGATATTTGTTTGTGGGTGTGATCCTGTTTTTTTGTATCTCTGTTTTTTTCCCTCTCGCATCATGGATTCTTATGAAGCAACAAGGATTGTGTTCTCTAGGATCCAGAATTTGGACCCTGAAAATGCTTCCAAAATCATGGGGTTTCTTTTGATTCAAGACCATGGAGAGAAGGAGATGATTAGATTGGCCTTTGGCCCTGAAGCTCTGCTTCACTCTGTTATTCTTAAGACTAGGAAGGATTTGGGTCTTCCGTCCACGAACTCGCCGTCCACGACGAGTTCTTCGCCGTCTCCGTTTAGTCTTTCGAGGCAGAGTTCTTCTACTTCTTCTTCGAGGTTTGGAATTAATCTTCCTCCTTCACTTACGATTCCGAGTCCTTCTTCCAGTTCTGTTTCGTGGGCTACTGGTTTTTCGCCTGAGCTTCAAAATTCGGATGATCATTTGATTAGTCCGGGGAATTTACCACTTGGGTCGTCGTGTTTTAGTGCTGGAGAAGCTCCGGTGACTGATATGATTGATGAGTTTCAACTTCAGGACCAGCTTTCGTTTCTCAACGAGGGTTCTCCGACCATCGGCGTTAAGAATTCCGACTTGTTTTTCCCTCCGGTGGACTTGTCTTCGAGTCCCACCGGCGGTGGGTTTGGTTCCTATGGTGGAGATGGTACCTGGAGTGGAGGGGTAGTCCACCGCCGGAGCTACTCTGTTAACGATGCCAGTTTGGGAACAGAGGATTTGAATAGTGGGTTGGGTTGGAAGCCTTGTCTTTACTACGCTAGAGGGTTTTGTAAGAATGGAACCAGCTGCCGGTTTCTCCACAGCGGTCTTGGAGACGCCGACGGCGGCGGCGCCGCCGTCGGCTCGCCGAGTAAGATCGAAATGATGGACCAGTGCCATGAGCTTTTCAGATCCAAATCCTCTGCTCAGCAGCGCCTCGCCGCCGCTTCTCAGCTCATGGCCTCTGCTAATGCCTTCCCTTACTCTCCCAAATCCATCAATTTCCTTCTCCAACAACAACAAAGCGATTCCCAGAGAGCCGCCGCTGCGGCCCTGATAATGGGCGAAGATCTTCACAAATTCAGCCGGTCCGGCCGCTTGGAGCGCAACGAGTTCTCATTGAATGGCAGCGCCGGTATTGTCAATCCAGCTTCAAGACAGATCTACTTAACATTCCCAGCCGACAGCACCTTTAAGGAAGAAGATGTATCGAATTATTTCAGCATGTACGGTCCAGTTCAAGATGTGAGAATCCCATATCAACAGAAGAGAATGTTTGGATTTGTCACTTTTGTTTATCCTGAAACAGTGAAGCTCATTTTGGCTAAAGGGAATCCTCATTTTGTTTGTGATGCTCGTGTTCTTGTTAAACCATACAAGGAAAAAGGCAAAGTCCCAGACAAGAAACAGCAGCAAATCGATAGAGATTTCTCCCCTTGTGGAACACCAACTGGGTTGGATTCAAGAGAGCTCTACGATCATCTTCAACTCGGCTCAAGAATGTTCTACAATTCTCAGCAGGATCTGCTTCTGCGGAGGAAACTGGAAAAACAGCAAGCTGATATTGATCTTCAAAGTCGACGCCTTCTGAATCTACAGCTTCTTGACGTGAAGAAAAACCAGCTCCCTCACCCTTACAACCACCACCGTGCTTTCTCCCCCGGCAGCCCGATTCCTTCCCCGACGCATTCTCCGAACCCGTTTGCTCAAAATCTCATCTTCCCCACCATTCGTAGTGCTAGCAGCTGCAGCAATTCTGATATCTTAAGAGAGAATGGCCCTACGCCACCGCCCGTTACGATCGTATCTTCAACCGATATGCCTCGGCAGCTATCGCCACCGGCAAACGAATTCTCTGTCCATGACAAGGAGACATCCCAAAATGATGACATTGATTTACTTGAATGTTTCGAACACAACCTCCCGGATAGTCCCTTTGCATCACCAGCAAAAGCCACCGGCGGCGAACATGCAGCAAACGACTCCGACGACGCCGACGCCAACCCCGAGTCGAATCTCACATCAACTTCCTCTCTGGAAGTAGCAGCATCCTTCAAATCCTACAATTGCCAAATGCCAAGGTTCCCATCGAGCCACGGATCGATCGGAATGTACGTAGGGACAGGCGGGCCGACATGTCCCGTGGGGATTTAG

Coding sequence (CDS)

ATGGATTCTTATGAAGCAACAAGGATTGTGTTCTCTAGGATCCAGAATTTGGACCCTGAAAATGCTTCCAAAATCATGGGGTTTCTTTTGATTCAAGACCATGGAGAGAAGGAGATGATTAGATTGGCCTTTGGCCCTGAAGCTCTGCTTCACTCTGTTATTCTTAAGACTAGGAAGGATTTGGGTCTTCCGTCCACGAACTCGCCGTCCACGACGAGTTCTTCGCCGTCTCCGTTTAGTCTTTCGAGGCAGAGTTCTTCTACTTCTTCTTCGAGGTTTGGAATTAATCTTCCTCCTTCACTTACGATTCCGAGTCCTTCTTCCAGTTCTGTTTCGTGGGCTACTGGTTTTTCGCCTGAGCTTCAAAATTCGGATGATCATTTGATTAGTCCGGGGAATTTACCACTTGGGTCGTCGTGTTTTAGTGCTGGAGAAGCTCCGGTGACTGATATGATTGATGAGTTTCAACTTCAGGACCAGCTTTCGTTTCTCAACGAGGGTTCTCCGACCATCGGCGTTAAGAATTCCGACTTGTTTTTCCCTCCGGTGGACTTGTCTTCGAGTCCCACCGGCGGTGGGTTTGGTTCCTATGGTGGAGATGGTACCTGGAGTGGAGGGGTAGTCCACCGCCGGAGCTACTCTGTTAACGATGCCAGTTTGGGAACAGAGGATTTGAATAGTGGGTTGGGTTGGAAGCCTTGTCTTTACTACGCTAGAGGGTTTTGTAAGAATGGAACCAGCTGCCGGTTTCTCCACAGCGGTCTTGGAGACGCCGACGGCGGCGGCGCCGCCGTCGGCTCGCCGAGTAAGATCGAAATGATGGACCAGTGCCATGAGCTTTTCAGATCCAAATCCTCTGCTCAGCAGCGCCTCGCCGCCGCTTCTCAGCTCATGGCCTCTGCTAATGCCTTCCCTTACTCTCCCAAATCCATCAATTTCCTTCTCCAACAACAACAAAGCGATTCCCAGAGAGCCGCCGCTGCGGCCCTGATAATGGGCGAAGATCTTCACAAATTCAGCCGGTCCGGCCGCTTGGAGCGCAACGAGTTCTCATTGAATGGCAGCGCCGGTATTGTCAATCCAGCTTCAAGACAGATCTACTTAACATTCCCAGCCGACAGCACCTTTAAGGAAGAAGATGTATCGAATTATTTCAGCATGTACGGTCCAGTTCAAGATGTGAGAATCCCATATCAACAGAAGAGAATGTTTGGATTTGTCACTTTTGTTTATCCTGAAACAGTGAAGCTCATTTTGGCTAAAGGGAATCCTCATTTTGTTTGTGATGCTCGTGTTCTTGTTAAACCATACAAGGAAAAAGGCAAAGTCCCAGACAAGAAACAGCAGCAAATCGATAGAGATTTCTCCCCTTGTGGAACACCAACTGGGTTGGATTCAAGAGAGCTCTACGATCATCTTCAACTCGGCTCAAGAATGTTCTACAATTCTCAGCAGGATCTGCTTCTGCGGAGGAAACTGGAAAAACAGCAAGCTGATATTGATCTTCAAAGTCGACGCCTTCTGAATCTACAGCTTCTTGACGTGAAGAAAAACCAGCTCCCTCACCCTTACAACCACCACCGTGCTTTCTCCCCCGGCAGCCCGATTCCTTCCCCGACGCATTCTCCGAACCCGTTTGCTCAAAATCTCATCTTCCCCACCATTCGTAGTGCTAGCAGCTGCAGCAATTCTGATATCTTAAGAGAGAATGGCCCTACGCCACCGCCCGTTACGATCGTATCTTCAACCGATATGCCTCGGCAGCTATCGCCACCGGCAAACGAATTCTCTGTCCATGACAAGGAGACATCCCAAAATGATGACATTGATTTACTTGAATGTTTCGAACACAACCTCCCGGATAGTCCCTTTGCATCACCAGCAAAAGCCACCGGCGGCGAACATGCAGCAAACGACTCCGACGACGCCGACGCCAACCCCGAGTCGAATCTCACATCAACTTCCTCTCTGGAAGTAGCAGCATCCTTCAAATCCTACAATTGCCAAATGCCAAGGTTCCCATCGAGCCACGGATCGATCGGAATGTACGTAGGGACAGGCGGGCCGACATGTCCCGTGGGGATTTAG

Protein sequence

MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKDLGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMASANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHDKETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLEVAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI

Homology

[Close]

BLAST of Carg25677 vs. NCBI nr
Match: KAG7030783.1 (Zinc finger CCCH domain-containing protein 53 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1375.5 bits (3559), Expect = 0.0e+00
Identity = 695/695 (100.00%), Postives = 695/695 (100.00%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD
Sbjct: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60

Query: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120
           LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE
Sbjct: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
           LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF
Sbjct: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
           PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG
Sbjct: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS
Sbjct: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300

Query: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN
Sbjct: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA
Sbjct: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF 480
           KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF
Sbjct: 421 KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF 480

Query: 481 YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPT 540
           YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPT
Sbjct: 481 YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPT 540

Query: 541 HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHD 600
           HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHD
Sbjct: 541 HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHD 600

Query: 601 KETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLEVA 660
           KETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLEVA
Sbjct: 601 KETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLEVA 660

Query: 661 ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI
Sbjct: 661 ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 695

[Close]

BLAST of Carg25677 vs. NCBI nr
Match: XP_022941629.1 (zinc finger CCCH domain-containing protein 53-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1363.2 bits (3527), Expect = 0.0e+00
Identity = 691/695 (99.42%), Postives = 692/695 (99.57%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD
Sbjct: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60

Query: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120
           LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE
Sbjct: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
           LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF
Sbjct: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
           PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG
Sbjct: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHEL RSKSSAQQRLAAASQLMAS
Sbjct: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSSAQQRLAAASQLMAS 300

Query: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ANAFPYSPKSINFLLQQ QSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN
Sbjct: 301 ANAFPYSPKSINFLLQQHQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA
Sbjct: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF 480
           KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF
Sbjct: 421 KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF 480

Query: 481 YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPT 540
           YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPT
Sbjct: 481 YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPT 540

Query: 541 HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHD 600
           HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHD
Sbjct: 541 HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHD 600

Query: 601 KETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLEVA 660
           KETSQNDDIDLLECFEHNLPDSPFASPAKAT G+HAANDSDDADANPESNLTSTSSLEVA
Sbjct: 601 KETSQNDDIDLLECFEHNLPDSPFASPAKAT-GDHAANDSDDADANPESNLTSTSSLEVA 660

Query: 661 ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI
Sbjct: 661 ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 694

[Close]

BLAST of Carg25677 vs. NCBI nr
Match: XP_022941628.1 (zinc finger CCCH domain-containing protein 53-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1358.2 bits (3514), Expect = 0.0e+00
Identity = 691/697 (99.14%), Postives = 692/697 (99.28%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD
Sbjct: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60

Query: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120
           LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE
Sbjct: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
           LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF
Sbjct: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
           PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG
Sbjct: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHEL RSKSSAQQRLAAASQLMAS
Sbjct: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSSAQQRLAAASQLMAS 300

Query: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ANAFPYSPKSINFLLQQ QSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN
Sbjct: 301 ANAFPYSPKSINFLLQQHQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA
Sbjct: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR 480
           KGNPHFVCDARVLVKPYKEKGKVPDK  KQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR
Sbjct: 421 KGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR 480

Query: 481 MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPS 540
           MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPS
Sbjct: 481 MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPS 540

Query: 541 PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSV 600
           PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSV
Sbjct: 541 PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSV 600

Query: 601 HDKETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLE 660
           HDKETSQNDDIDLLECFEHNLPDSPFASPAKAT G+HAANDSDDADANPESNLTSTSSLE
Sbjct: 601 HDKETSQNDDIDLLECFEHNLPDSPFASPAKAT-GDHAANDSDDADANPESNLTSTSSLE 660

Query: 661 VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI
Sbjct: 661 VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696

[Close]

BLAST of Carg25677 vs. NCBI nr
Match: XP_022988489.1 (zinc finger CCCH domain-containing protein 53-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 1343.2 bits (3475), Expect = 0.0e+00
Identity = 682/695 (98.13%), Postives = 687/695 (98.85%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD
Sbjct: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60

Query: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120
           LGLPSTNSPST SSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSP+
Sbjct: 61  LGLPSTNSPSTMSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPD 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
           LQ+SDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLN+GSPTIGVKNSDLFF
Sbjct: 121 LQSSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNDGSPTIGVKNSDLFF 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
           PPVDLSSSPTGGG  SYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG
Sbjct: 181 PPVDLSSSPTGGGISSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNGTSCRFLHSGLGD+DGGGAAVGSPSKIEMMDQCHEL RSKSSAQQRLAAASQLMAS
Sbjct: 241 FCKNGTSCRFLHSGLGDSDGGGAAVGSPSKIEMMDQCHELLRSKSSAQQRLAAASQLMAS 300

Query: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN
Sbjct: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA
Sbjct: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF 480
           KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF
Sbjct: 421 KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF 480

Query: 481 YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPT 540
           YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYN HRAFS GSPIPSPT
Sbjct: 481 YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNSHRAFSTGSPIPSPT 540

Query: 541 HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHD 600
           HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSP ANEFSVHD
Sbjct: 541 HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPSANEFSVHD 600

Query: 601 KETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLEVA 660
           KETSQNDDIDLLECFEHNLPDSPFASPAKAT G+HAANDSDDADANPESNLTSTSSLEVA
Sbjct: 601 KETSQNDDIDLLECFEHNLPDSPFASPAKAT-GDHAANDSDDADANPESNLTSTSSLEVA 660

Query: 661 ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI
Sbjct: 661 ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 694

[Close]

BLAST of Carg25677 vs. NCBI nr
Match: XP_022988464.1 (zinc finger CCCH domain-containing protein 53-like isoform X1 [Cucurbita maxima] >XP_022988473.1 zinc finger CCCH domain-containing protein 53-like isoform X1 [Cucurbita maxima] >XP_022988482.1 zinc finger CCCH domain-containing protein 53-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1338.2 bits (3462), Expect = 0.0e+00
Identity = 682/697 (97.85%), Postives = 687/697 (98.57%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD
Sbjct: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60

Query: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120
           LGLPSTNSPST SSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSP+
Sbjct: 61  LGLPSTNSPSTMSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPD 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
           LQ+SDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLN+GSPTIGVKNSDLFF
Sbjct: 121 LQSSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNDGSPTIGVKNSDLFF 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
           PPVDLSSSPTGGG  SYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG
Sbjct: 181 PPVDLSSSPTGGGISSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNGTSCRFLHSGLGD+DGGGAAVGSPSKIEMMDQCHEL RSKSSAQQRLAAASQLMAS
Sbjct: 241 FCKNGTSCRFLHSGLGDSDGGGAAVGSPSKIEMMDQCHELLRSKSSAQQRLAAASQLMAS 300

Query: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN
Sbjct: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA
Sbjct: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR 480
           KGNPHFVCDARVLVKPYKEKGKVPDK  KQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR
Sbjct: 421 KGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR 480

Query: 481 MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPS 540
           MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYN HRAFS GSPIPS
Sbjct: 481 MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNSHRAFSTGSPIPS 540

Query: 541 PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSV 600
           PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSP ANEFSV
Sbjct: 541 PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPSANEFSV 600

Query: 601 HDKETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLE 660
           HDKETSQNDDIDLLECFEHNLPDSPFASPAKAT G+HAANDSDDADANPESNLTSTSSLE
Sbjct: 601 HDKETSQNDDIDLLECFEHNLPDSPFASPAKAT-GDHAANDSDDADANPESNLTSTSSLE 660

Query: 661 VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI
Sbjct: 661 VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696

[Close]

BLAST of Carg25677 vs. ExPASy Swiss-Prot
Match: Q0D3J9 (Zinc finger CCCH domain-containing protein 53 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0682400 PE=2 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 5.2e-141
Identity = 352/741 (47.50%), Postives = 435/741 (58.70%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MD+YEAT++VFSRIQ LDP++A+KIMGFLLIQDHGEKEMIRLAFGPEALLH+V+ K RK+
Sbjct: 1   MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60

Query: 61  LGLPSTNSPSTTSS-------SPSPFSLSRQSS---STSSSRFGINLPPSLTIPSPSSSS 120
           LGL   + P T +S       + SPF LSRQ+S    T+ S   ++ P S   P   S +
Sbjct: 61  LGLLPASGPGTPTSVAAAAAAAHSPFMLSRQNSGRCGTAPSPLSVSSPSSWAPPPVFSRN 120

Query: 121 VSWATGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPT 180
            S + G   E+    D LISP N     S F  G+     ++DE QLQDQL+FLNEG   
Sbjct: 121 NSISNGAGEEMVGLGDELISPANGGGPPSPFFGGD----PLMDELQLQDQLAFLNEGGVP 180

Query: 181 IGVKNSDLFFPPVDLSS--SPTGGGFGSYGGDGTW-SGGVVHRRSYSVNDASLGTEDLNS 240
            G +      P  D     SP GG  G +  +  W +GG  HRRS SV++  LG  D   
Sbjct: 181 AGHQ-----MPMFDGGECRSPGGGDGGLFSYNLGWANGGPGHRRSASVSELCLGGAD--- 240

Query: 241 GLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHE-LFRSKSS 300
           GLGWKPCLYYARG+CKNG++CRF+H GL D D  G     PS +E   QC + L RSKS 
Sbjct: 241 GLGWKPCLYYARGYCKNGSACRFVHGGLPD-DAAGKM--DPSAVE--QQCQDFLIRSKS- 300

Query: 301 AQQRLAAASQLMASANAFPYSP----KSINFLL--QQQQSDSQRAAAAALIM--GEDLHK 360
             QRLAAA+   +   + P SP    K ++ LL  QQQQ++SQRAAAAA +M  G++ HK
Sbjct: 301 --QRLAAAAFPYSPTGSLPGSPSAATKCLSLLLQQQQQQNESQRAAAAAALMLGGDEAHK 360

Query: 361 FSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPY 420
           F    RLER +F     A ++NP SRQIYLTFPADSTF+EEDVSNYFS+YGPV DVRIPY
Sbjct: 361 FMGRPRLERADF-----ASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPY 420

Query: 421 QQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDR--D 480
           QQKRMFGFVTFVYPETVKLILAKGNPHF+CDARVLVKPYKEKGKVPDK  KQ Q     D
Sbjct: 421 QQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQHQPGERVD 480

Query: 481 FSPCGTPTGLDSRELYDHLQLGSRMFY--NSQQDLLLRRKLEKQ------QADIDLQSRR 540
           FS C TPTGLD+R+ +D  QLG+RM    NS  ++LLRRKLE+Q      Q  I+L SRR
Sbjct: 481 FSSCTTPTGLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQQQAAELQQAIELHSRR 540

Query: 541 LLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPTHSPNPFAQNLIFPTIRSASSCSNSDI 600
           L+ LQLLD K                     +PT   NPF+ +         S   + ++
Sbjct: 541 LMGLQLLDFKSR----------------AAAAPTPIGNPFSASQTAANATGESPPDSGEL 600

Query: 601 LRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHDKETSQNDDIDLLECFEHNLPDSPFAS 660
            + +G        V+  D                + +S N D D  +  EHNLPDSPFAS
Sbjct: 601 GKGSGFLLAHKKAVNGADKEESTG----------ESSSPNTDSD--QSVEHNLPDSPFAS 660

Query: 661 PAKATGGEHAANDSDDADANPESNLTSTSSLEVAASF----------------------- 683
           P K+ G       + D  A  E+ +++T+S   +A++                       
Sbjct: 661 PTKSAG------FARDPFAPTEAEISATASTGCSATYVGINNGASNGGTNHLLPSALDMP 682

[Close]

BLAST of Carg25677 vs. ExPASy Swiss-Prot
Match: Q10M00 (Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0328900 PE=2 SV=2)

HSP 1 Score: 471.9 bits (1213), Expect = 1.3e-131
Identity = 332/734 (45.23%), Postives = 424/734 (57.77%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MD+YEAT++VFSRIQ LDP++A+KIMG LLIQDHG+KEMIRLAFGPEALLHSV+ + RK+
Sbjct: 1   MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60

Query: 61  LGL------PSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSS----SS 120
           L L      PS++SP T  ++ SPF LSRQ    +S R     P  L+  SPSS      
Sbjct: 61  LALLPPPPPPSSSSP-TVPAAHSPFLLSRQ----NSGRGPAPSPSPLSASSPSSWAQAQP 120

Query: 121 VSWATGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTD--MIDEFQLQDQLSFLNEGS 180
            S + G   E+  + + LISP N   G++  +    P     ++D+FQLQ+QL+FLNEG 
Sbjct: 121 FSRSNGSVDEVVGAGEELISPANSGGGAAANAPPFFPRGGDVLLDDFQLQEQLAFLNEGG 180

Query: 181 -----PTIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTE 240
                P  G   ++   P         GGG   Y G G  +GG  HRRS SVN+  LG  
Sbjct: 181 VNPSHPLQGFDGAECRSP-----GPGEGGGMFPY-GLGWANGGPGHRRSASVNELCLGGG 240

Query: 241 DLNSGLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHE-LFR 300
             + G GWKPCLYYARGFCKNG+SCRF+H     A  G A   + ++     QC + L R
Sbjct: 241 S-SDGFGWKPCLYYARGFCKNGSSCRFVHGDDAAALTGAAMDAATAE---QQQCQDFLLR 300

Query: 301 SKSSAQQRLAAASQLMASANAFPYSP----KSINFLLQQQQSDSQRAAAAALIM---GED 360
           SKS   QRL  A+   +   + P SP    K ++ LLQQQ +D+QRAAAAA +M    ++
Sbjct: 301 SKS---QRLGPAAFPYSPTGSLPGSPSAATKCLSLLLQQQHNDNQRAAAAAALMLGGSDE 360

Query: 361 LHKFSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVR 420
            HKF    RL+R +F     A ++NP SRQIYLTFPADSTF+EEDVSNYFS+YGPV DVR
Sbjct: 361 AHKFMGRPRLDRVDF-----ASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVR 420

Query: 421 IPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDF 480
           IPYQQKRMFGFVTFVYPETVKLILAKGNPHF+CDARVLVKPYKEKGKVPDK ++    DF
Sbjct: 421 IPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKH-QGDF 480

Query: 481 SPCGTPTGLDSRELYDHLQLGSRMFY--NSQQDLLLRRKLEKQ------QADIDLQSRRL 540
           S C TPTGLD R+ +D  QLG+RM    NS  +++LRRKLE+Q      Q  I+L SRRL
Sbjct: 481 SGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMMLRRKLEEQQQAAELQQAIELHSRRL 540

Query: 541 LNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPTHSPNPFAQNLIFPTIRSASSCSNSDIL 600
           ++LQLLD+K            A +   P  +   S  P A  ++     S      +   
Sbjct: 541 MDLQLLDLKNRAAAAVTT---AMAMTIPTANAFGSSQPLATTMVESPPDSGEQLKGTGYF 600

Query: 601 RENGPTPPPVTIVSSTDMPRQLSPPANEFSVHDKETSQNDDIDLLECFEHNLPDSPFASP 660
            E                 R++     +      E S N D D  +  EHNLPDSPFASP
Sbjct: 601 TEE----------------RKMVNGGGDKEESAGEASLNADSD--QSLEHNLPDSPFASP 660

Query: 661 AKATGGEHAANDSDDADANPESNLTST-------------------SSLEVAASFKSYNC 683
            K++   H +  + D      S+ +++                   S+L++  S + +  
Sbjct: 661 TKSSVSAHQSFTTTDTGVVATSSCSASHVGISAGTNAGGGINHLRPSTLDI-PSPRDFFS 688

[Close]

BLAST of Carg25677 vs. ExPASy Swiss-Prot
Match: Q10LZ9 (Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0329200 PE=2 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 7.8e-129
Identity = 333/728 (45.74%), Postives = 425/728 (58.38%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MD+YEAT++VFSRIQ LDP++A+KIMG LLIQDHG+KEMIRLAFGPEALLHSV+ + RK+
Sbjct: 1   MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60

Query: 61  LGL----PSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWAT- 120
           L L     + +S  T  ++ SPF LSRQ    +S R     P S     P S S S    
Sbjct: 61  LALLPPPQAASSSPTVPAAHSPFLLSRQ----NSGRCPAPSPSSWAQAQPFSRSNSMGNG 120

Query: 121 GFSPELQNSDDHLISPGNLPLGSSCFSAGEAPV-----TDMIDEFQLQDQLSFLNEGSPT 180
           G + E+  + + L+SP N   G    +A   P        ++D+F+LQ+QL+FL++G+  
Sbjct: 121 GAADEMVGAGEELMSPLN---GGGGAAANAPPFFPRGGDALLDDFELQEQLAFLHDGAGG 180

Query: 181 IGVKNSDLFFPPVDLSSSPTG--GGFGSYGGDGTW-SGGVVHRRSYSVNDASLGTEDLNS 240
           +   ++   F   +  S   G  GG   YG    W +GG  HRRS SVN+  LG      
Sbjct: 181 VNPGHALQAFDGAECRSPGPGESGGMLPYG--LAWANGGPGHRRSASVNELCLG----GD 240

Query: 241 GLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHE-LFRSKSS 300
           G GWKPCLYYARGFCKNG++CRF+H GL D     A            QC + L RSKS 
Sbjct: 241 GFGWKPCLYYARGFCKNGSTCRFVHGGLSDDAAMDATTAE------QQQCQDFLLRSKS- 300

Query: 301 AQQRLAAASQLMASANAFPYSP----KSINFLLQQQQ--SDSQRAAAAALIM--GEDLHK 360
             QRL  A+       + P SP    K ++ LLQQQQ  +D+QRAAAAAL++  G++ HK
Sbjct: 301 --QRLGPAAFPFTPTGSLPASPSATSKCLSLLLQQQQQHNDNQRAAAAALMLAGGDEAHK 360

Query: 361 FSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPY 420
           F    RL+R +F     A ++NP SRQIYLTFPADSTF+EEDVSNYFS+YGPV DVRIPY
Sbjct: 361 FMGRPRLDRVDF-----ASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPY 420

Query: 421 QQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPC 480
           QQKRMFGFVTFVYPETVKLILAKGNPHF+CDARVLVKPYKEKGKVPDK ++Q   DF  C
Sbjct: 421 QQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQGDFC-C 480

Query: 481 GTPTGLDSRELYDHLQLGSRMFY--NSQQDLLLRRKLEKQ------QADIDLQSRRLLNL 540
            +PTGLD+R+ +D  QLG+RM    NS  +L+LRRKLE+Q      Q  IDL SRRL+ L
Sbjct: 481 MSPTGLDARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQAAELQQAIDLHSRRLIGL 540

Query: 541 QLLDVKKNQLPHPYNHHRAFSPGSPIPSPTHSPNPFAQNLIFPTIRSASSCSNSDILREN 600
           QLLD+K +   H         P +PI +   S  P A  ++       S  S++  L  +
Sbjct: 541 QLLDLKSSAAVHAAETTTMSLP-TPITNAFTSGQPGATTIV------ESPPSSTGQLMAS 600

Query: 601 GPTPPPVTIVSSTDMPRQLSPPANEFSVHDKETSQNDDIDLLECFEHNLPDSPFASPAKA 660
             +P    +V+  +                 E ++N D D  +  EHNLPDSPFAS  K+
Sbjct: 601 CGSPSEGKVVNGGNKADSAG-----------EVTRNADSD--QSGEHNLPDSPFASSTKS 660

Query: 661 TGGEHAANDSDDADANPESNLTSTSSLEVAASF---------KSYNCQMPR---FP---- 683
           T    A   +       E + T+ SS  +  S           + +   PR   FP    
Sbjct: 661 TAFFTA---TAATAIGSEGDFTTGSSCNIGGSAVGSANPLRPPTLDIPSPRTCFFPMPRL 677

[Close]

BLAST of Carg25677 vs. ExPASy Swiss-Prot
Match: Q9SV09 (Zinc finger CCCH domain-containing protein 46 OS=Arabidopsis thaliana OX=3702 GN=At3g51950 PE=1 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.2e-114
Identity = 306/702 (43.59%), Postives = 388/702 (55.27%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MD YEATRIV SRIQ+LDPENASKIMG LL+QDHGEKEMIRLAFGPE L+HSVI+K +K+
Sbjct: 1   MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60

Query: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120
           LGL         + S SP+S   +  S  ++R                       G S  
Sbjct: 61  LGL--------MNCSRSPWSHQDELISPKNNR-----------------------GSS-- 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
                   ++P +LP     ++ G     D+ ++F+L D ++           +++D   
Sbjct: 121 --------LNPASLPF----YANGGRSSRDLTNDFELMDDMN----------SRSTDFLG 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
                S S    G G YGGD                         + G G  PC Y+ARG
Sbjct: 181 SVHARSGSCVLDGLG-YGGDS------------------------DLGFGGVPCSYFARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNG SCRF+HS     DGG   VGSPS+IE++          +S   RL  A   M  
Sbjct: 241 FCKNGASCRFVHS-----DGGADLVGSPSRIELL--------RSNSVPPRL--AHHFMTR 300

Query: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ++   +S K +N     QQ+D QR AAAAL++G++L K  R  R ER + S      +  
Sbjct: 301 SSLPSFSTKGVNL----QQNDVQR-AAAALMIGDELQKLGR-WRPERIDLS-----AMAC 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADS F+EEDVSNYFS +GPVQDVRIPYQQKRMFGFVTFVYPETVK ILA
Sbjct: 361 PASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDRDFSPCGTPTGLDS--RELYDHLQLG 480
           KGNPHFVCD+RVLVKPYKEKGKVPDK    Q  +R+ S    PTGLDS  R++     LG
Sbjct: 421 KGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTERELS----PTGLDSSPRDV-----LG 480

Query: 481 SRMFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKN-QLPHPYNHHRAFSPGSP 540
            R FYN+ QD+L R K E++   ++LQSRRL+NLQLLDVKK+ QL  P N          
Sbjct: 481 GRGFYNNTQDVLWRSKFEEE--ILELQSRRLMNLQLLDVKKHFQLNSPTN---------- 540

Query: 541 IPSPTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANE 600
                HSPNPF+Q+LI                     +P P++++      ++      +
Sbjct: 541 ----IHSPNPFSQSLI---------------------SPRPLSVI------KREYDGGEK 540

Query: 601 FSVHDKETSQNDDIDLLECFEHNLPDSPFASPAK--ATGGEHAANDSDDADANPESNLTS 660
                KE S +D ++L E  E +LPDSPFASPA       + A N+  D  +    N  +
Sbjct: 601 GKGSSKEGSDDDTMNLPERLEDSLPDSPFASPAHHLLLFADSADNNGSDLWSPSSDNDDN 540

Query: 661 TSSLEVAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           ++   ++ SF S+N QMPR P    +IGM  G GGPTC VGI
Sbjct: 661 STPSTLSDSFNSFNYQMPRLP----AIGMLPGRGGPTCRVGI 540

[Close]

BLAST of Carg25677 vs. ExPASy Swiss-Prot
Match: Q94CJ8 (Zinc finger CCCH domain-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN=At5g12440 PE=2 SV=3)

HSP 1 Score: 371.3 bits (952), Expect = 2.4e-101
Identity = 277/688 (40.26%), Postives = 391/688 (56.83%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDS +AT ++ ++I++L+P+ A KI+G+LL+ D G+++++ LA GPE++L S I K +  
Sbjct: 1   MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60

Query: 61  LGLPSTNSPSTTSSSPSPFS------LSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWA 120
           LG+ S NSPS+T +SPSP +      L+ + SS S+             PS  SS+  W+
Sbjct: 61  LGIFSNNSPSSTPTSPSPLNPICRPPLNGRGSSHSNGFMDFR----RNSPSSPSSTSPWS 120

Query: 121 TGFSPELQNSDDHLISPGNLPL----------GSSCFSAGEAPV---TDMIDEFQLQDQL 180
                   N ++  ISP + P+          G S   +G A      D++D+ QL D L
Sbjct: 121 FNNCINGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADLLDDQQLNDCL 180

Query: 181 SFLNEGSPTIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLG 240
           SFL++       K  DL  P + L  S  G G              +HRRS+S  DAS  
Sbjct: 181 SFLDDSCS----KTEDLVDPSIPLDYSVDGDGETH-----------LHRRSFSC-DASFV 240

Query: 241 TEDLNSGLGWKPCLYYARGFCKNGTSCRFLHSGLGD-ADGGGAAVGSPSKIEMMDQCHEL 300
           + D   G G KPC+Y++RG CKNG SC+F+H G  D  DG G    SP K+E   + HE 
Sbjct: 241 SGDDGFGGGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVADSPRKMENFVRQHEE 300

Query: 301 FRSKSSAQQRLAAASQLMASANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFS 360
                 A Q+   ASQ++  A   PY  K ++FLLQQ    +QR     L  G++    S
Sbjct: 301 MMRLKLAYQQQRLASQILGRAPQLPYE-KRMDFLLQQH---AQR--DGGLPFGDERFWSS 360

Query: 361 RSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQ 420
             GRLER E +++      N ASRQIYLTFPADSTFK+EDV+ YFS++G VQDVRIPYQQ
Sbjct: 361 SPGRLERMELAMH-LGDQSNSASRQIYLTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQ 420

Query: 421 KRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKK-----QQQIDR-D 480
           KRMFGFV+F +PETVK++LA+GNPHF+CD+RVLVKPYKEKGKV DKK     QQQI+R +
Sbjct: 421 KRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGN 480

Query: 481 FSPCGTPTGLDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD----IDLQSRRLLNL 540
           +SPC +P+G+D RE  D   LGS+M Y  ++  ++RRK+E  QAD    I+L+ RR +NL
Sbjct: 481 YSPCSSPSGIDPREQSD-FHLGSKMLYERRE--MMRRKIE--QADLLRAIELERRRFINL 540

Query: 541 QLLDVKKNQLPHPYNHHRAFSPGSP-IPSPTHSPNPFAQNLIFPTIRSASSCSNSDILRE 600
           QL + K +      NHHR+FS GSP   S   + +P  Q+     +  A +   +D   E
Sbjct: 541 QLPEFKNSV---TLNHHRSFSVGSPGYFSSAGNQSPDFQS----ELNGADALKVTDDTLE 600

Query: 601 NGPTPPPVTIVSSTDMPRQLSPPANEFSVHDKETSQND--DIDLLECFEHNLPDSPFASP 656
             P P    +V+   +    S  A E      ET++++  D D     E  LP + F  P
Sbjct: 601 LHPYP----VVNPMSVNNSYSNGAKE------ETNKSELLDPDSGSTIELVLPSNLF--P 635

[Close]

BLAST of Carg25677 vs. ExPASy TrEMBL
Match: A0A6J1FNZ7 (zinc finger CCCH domain-containing protein 53-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446931 PE=4 SV=1)

HSP 1 Score: 1363.2 bits (3527), Expect = 0.0e+00
Identity = 691/695 (99.42%), Postives = 692/695 (99.57%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD
Sbjct: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60

Query: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120
           LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE
Sbjct: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
           LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF
Sbjct: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
           PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG
Sbjct: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHEL RSKSSAQQRLAAASQLMAS
Sbjct: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSSAQQRLAAASQLMAS 300

Query: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ANAFPYSPKSINFLLQQ QSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN
Sbjct: 301 ANAFPYSPKSINFLLQQHQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA
Sbjct: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF 480
           KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF
Sbjct: 421 KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF 480

Query: 481 YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPT 540
           YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPT
Sbjct: 481 YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPT 540

Query: 541 HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHD 600
           HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHD
Sbjct: 541 HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHD 600

Query: 601 KETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLEVA 660
           KETSQNDDIDLLECFEHNLPDSPFASPAKAT G+HAANDSDDADANPESNLTSTSSLEVA
Sbjct: 601 KETSQNDDIDLLECFEHNLPDSPFASPAKAT-GDHAANDSDDADANPESNLTSTSSLEVA 660

Query: 661 ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI
Sbjct: 661 ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 694

[Close]

BLAST of Carg25677 vs. ExPASy TrEMBL
Match: A0A6J1FSM5 (zinc finger CCCH domain-containing protein 53-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446931 PE=4 SV=1)

HSP 1 Score: 1358.2 bits (3514), Expect = 0.0e+00
Identity = 691/697 (99.14%), Postives = 692/697 (99.28%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD
Sbjct: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60

Query: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120
           LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE
Sbjct: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
           LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF
Sbjct: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
           PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG
Sbjct: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHEL RSKSSAQQRLAAASQLMAS
Sbjct: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSSAQQRLAAASQLMAS 300

Query: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ANAFPYSPKSINFLLQQ QSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN
Sbjct: 301 ANAFPYSPKSINFLLQQHQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA
Sbjct: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR 480
           KGNPHFVCDARVLVKPYKEKGKVPDK  KQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR
Sbjct: 421 KGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR 480

Query: 481 MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPS 540
           MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPS
Sbjct: 481 MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPS 540

Query: 541 PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSV 600
           PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSV
Sbjct: 541 PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSV 600

Query: 601 HDKETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLE 660
           HDKETSQNDDIDLLECFEHNLPDSPFASPAKAT G+HAANDSDDADANPESNLTSTSSLE
Sbjct: 601 HDKETSQNDDIDLLECFEHNLPDSPFASPAKAT-GDHAANDSDDADANPESNLTSTSSLE 660

Query: 661 VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI
Sbjct: 661 VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696

[Close]

BLAST of Carg25677 vs. ExPASy TrEMBL
Match: A0A6J1JLN7 (zinc finger CCCH domain-containing protein 53-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485698 PE=4 SV=1)

HSP 1 Score: 1343.2 bits (3475), Expect = 0.0e+00
Identity = 682/695 (98.13%), Postives = 687/695 (98.85%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD
Sbjct: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60

Query: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120
           LGLPSTNSPST SSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSP+
Sbjct: 61  LGLPSTNSPSTMSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPD 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
           LQ+SDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLN+GSPTIGVKNSDLFF
Sbjct: 121 LQSSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNDGSPTIGVKNSDLFF 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
           PPVDLSSSPTGGG  SYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG
Sbjct: 181 PPVDLSSSPTGGGISSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNGTSCRFLHSGLGD+DGGGAAVGSPSKIEMMDQCHEL RSKSSAQQRLAAASQLMAS
Sbjct: 241 FCKNGTSCRFLHSGLGDSDGGGAAVGSPSKIEMMDQCHELLRSKSSAQQRLAAASQLMAS 300

Query: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN
Sbjct: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA
Sbjct: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF 480
           KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF
Sbjct: 421 KGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSRMF 480

Query: 481 YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPT 540
           YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYN HRAFS GSPIPSPT
Sbjct: 481 YNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNSHRAFSTGSPIPSPT 540

Query: 541 HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSVHD 600
           HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSP ANEFSVHD
Sbjct: 541 HSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPSANEFSVHD 600

Query: 601 KETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLEVA 660
           KETSQNDDIDLLECFEHNLPDSPFASPAKAT G+HAANDSDDADANPESNLTSTSSLEVA
Sbjct: 601 KETSQNDDIDLLECFEHNLPDSPFASPAKAT-GDHAANDSDDADANPESNLTSTSSLEVA 660

Query: 661 ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI
Sbjct: 661 ASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 694

[Close]

BLAST of Carg25677 vs. ExPASy TrEMBL
Match: A0A6J1JMD8 (zinc finger CCCH domain-containing protein 53-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485698 PE=4 SV=1)

HSP 1 Score: 1338.2 bits (3462), Expect = 0.0e+00
Identity = 682/697 (97.85%), Postives = 687/697 (98.57%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD
Sbjct: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60

Query: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120
           LGLPSTNSPST SSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSP+
Sbjct: 61  LGLPSTNSPSTMSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPD 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
           LQ+SDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLN+GSPTIGVKNSDLFF
Sbjct: 121 LQSSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNDGSPTIGVKNSDLFF 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
           PPVDLSSSPTGGG  SYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG
Sbjct: 181 PPVDLSSSPTGGGISSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNGTSCRFLHSGLGD+DGGGAAVGSPSKIEMMDQCHEL RSKSSAQQRLAAASQLMAS
Sbjct: 241 FCKNGTSCRFLHSGLGDSDGGGAAVGSPSKIEMMDQCHELLRSKSSAQQRLAAASQLMAS 300

Query: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN
Sbjct: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA
Sbjct: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR 480
           KGNPHFVCDARVLVKPYKEKGKVPDK  KQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR
Sbjct: 421 KGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQIDRDFSPCGTPTGLDSRELYDHLQLGSR 480

Query: 481 MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPS 540
           MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYN HRAFS GSPIPS
Sbjct: 481 MFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPYNSHRAFSTGSPIPS 540

Query: 541 PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANEFSV 600
           PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSP ANEFSV
Sbjct: 541 PTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPSANEFSV 600

Query: 601 HDKETSQNDDIDLLECFEHNLPDSPFASPAKATGGEHAANDSDDADANPESNLTSTSSLE 660
           HDKETSQNDDIDLLECFEHNLPDSPFASPAKAT G+HAANDSDDADANPESNLTSTSSLE
Sbjct: 601 HDKETSQNDDIDLLECFEHNLPDSPFASPAKAT-GDHAANDSDDADANPESNLTSTSSLE 660

Query: 661 VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI
Sbjct: 661 VAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696

[Close]

BLAST of Carg25677 vs. ExPASy TrEMBL
Match: A0A5A7STU6 (Zinc finger CCCH domain-containing protein 53 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00440 PE=4 SV=1)

HSP 1 Score: 1127.1 bits (2914), Expect = 0.0e+00
Identity = 608/736 (82.61%), Postives = 638/736 (86.68%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDSYEA+RIVFSRIQNLDPENASKIMG LLIQDHGEKEMIRLAFGPEALLHSVILK RKD
Sbjct: 1   MDSYEASRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVILKARKD 60

Query: 61  LGLPSTNS---PSTTSSSPSPF-------SLSRQSSSTSSSRFGINLPPSLTIPSPSSSS 120
           L LP+ NS   PST SSSPSPF       S+SRQSS  SSSR GI+LP SLTIPSPSSSS
Sbjct: 61  LNLPAVNSPSTPSTPSSSPSPFALSTNPISISRQSS--SSSRLGISLPLSLTIPSPSSSS 120

Query: 121 -VSWATGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSP 180
            VSWA GFS +LQNSDDHLISPGNLPLGSSCF+AG AP +DMIDEFQLQDQLSFLN+GSP
Sbjct: 121 AVSWAAGFSSDLQNSDDHLISPGNLPLGSSCFAAGGAPASDMIDEFQLQDQLSFLNDGSP 180

Query: 181 TIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGL 240
           TIGVKNSDLFFPP DLSSSPTGGGFGSYGGD TW GG VHRRS SVNDA LGTEDLN GL
Sbjct: 181 TIGVKNSDLFFPPADLSSSPTGGGFGSYGGDATWGGGPVHRRSCSVNDACLGTEDLNCGL 240

Query: 241 GWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQ 300
           GWKPCLYYARGFCKNGTSCRFLH GLGD+D   AAVGSPSK++MM+QCHEL RSKSSAQQ
Sbjct: 241 GWKPCLYYARGFCKNGTSCRFLHGGLGDSDASAAAVGSPSKMDMMEQCHELLRSKSSAQQ 300

Query: 301 RLAAASQLMASANAFPYSPKSINFLLQQQQSDSQR---AAAAALIMGEDLHKFSRSGRLE 360
           RLAAASQLMASAN+FPYSPKSINFLLQQQQ+DSQR   AAAAAL+MGEDLHKFSRS RLE
Sbjct: 301 RLAAASQLMASANSFPYSPKSINFLLQQQQNDSQRAAAAAAAALMMGEDLHKFSRSSRLE 360

Query: 361 RNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGF 420
           RNEFS+NGSAGI+NPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGF
Sbjct: 361 RNEFSMNGSAGIINPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGF 420

Query: 421 VTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDS 480
           VTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDS
Sbjct: 421 VTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDS 480

Query: 481 RELYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD---IDLQSRRLLNLQLLDVKKNQLPHP 540
           RELYDHLQLGSRMFYN+ QDLL RRKLE+QQAD   +DLQSRRLLNLQLLDVKKNQLPH 
Sbjct: 481 RELYDHLQLGSRMFYNTHQDLLWRRKLEEQQADLQTLDLQSRRLLNLQLLDVKKNQLPH- 540

Query: 541 YNHHRAFSPGSPIPSPTHSPNP-FAQNLIFPTIRSASSCSNSDILRENG----PTPPPVT 600
           ++HHRA S GSPIPSPTHSPNP FAQNLIFP IRS+ S S SDILRENG     TPPPV+
Sbjct: 541 HHHHRALSTGSPIPSPTHSPNPLFAQNLIFPGIRSSGSSSTSDILRENGVAPVRTPPPVS 600

Query: 601 IV-SSTDMPRQLSPPANEFSV------HDKETSQNDDIDLLECFEHNLPDSPFASPAKAT 660
           ++ +STDMPRQ SP  N          +DKE SQ DD DLLECFEHNLPDSPFASPAKAT
Sbjct: 601 VMATSTDMPRQASPVDNGALATIGQGGNDKERSQIDDSDLLECFEHNLPDSPFASPAKAT 660

Query: 661 G------------GEHAANDSDDADANPESNLTSTSSLEVAASFKSYNCQMPRFPSSHGS 696
           G            GE AANDSDDA +   S LTSTSSLEVA SFKSYNCQ+PRFPS H  
Sbjct: 661 GDYATNFSDIAAVGE-AANDSDDASS---SILTSTSSLEVATSFKSYNCQIPRFPSGHSP 720

[Close]

BLAST of Carg25677 vs. TAIR 10
Match: AT3G51950.1 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 414.1 bits (1063), Expect = 2.3e-115
Identity = 306/702 (43.59%), Postives = 388/702 (55.27%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MD YEATRIV SRIQ+LDPENASKIMG LL+QDHGEKEMIRLAFGPE L+HSVI+K +K+
Sbjct: 1   MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60

Query: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120
           LGL         + S SP+S   +  S  ++R                       G S  
Sbjct: 61  LGL--------MNCSRSPWSHQDELISPKNNR-----------------------GSS-- 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
                   ++P +LP     ++ G     D+ ++F+L D ++           +++D   
Sbjct: 121 --------LNPASLPF----YANGGRSSRDLTNDFELMDDMN----------SRSTDFLG 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
                S S    G G YGGD                         + G G  PC Y+ARG
Sbjct: 181 SVHARSGSCVLDGLG-YGGDS------------------------DLGFGGVPCSYFARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNG SCRF+HS     DGG   VGSPS+IE++          +S   RL  A   M  
Sbjct: 241 FCKNGASCRFVHS-----DGGADLVGSPSRIELL--------RSNSVPPRL--AHHFMTR 300

Query: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ++   +S K +N     QQ+D QR AAAAL++G++L K  R  R ER + S      +  
Sbjct: 301 SSLPSFSTKGVNL----QQNDVQR-AAAALMIGDELQKLGR-WRPERIDLS-----AMAC 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADS F+EEDVSNYFS +GPVQDVRIPYQQKRMFGFVTFVYPETVK ILA
Sbjct: 361 PASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDRDFSPCGTPTGLDS--RELYDHLQLG 480
           KGNPHFVCD+RVLVKPYKEKGKVPDK    Q  +R+ S    PTGLDS  R++     LG
Sbjct: 421 KGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTERELS----PTGLDSSPRDV-----LG 480

Query: 481 SRMFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKN-QLPHPYNHHRAFSPGSP 540
            R FYN+ QD+L R K E++   ++LQSRRL+NLQLLDVKK+ QL  P N          
Sbjct: 481 GRGFYNNTQDVLWRSKFEEE--ILELQSRRLMNLQLLDVKKHFQLNSPTN---------- 540

Query: 541 IPSPTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANE 600
                HSPNPF+Q+LI                     +P P++++      ++      +
Sbjct: 541 ----IHSPNPFSQSLI---------------------SPRPLSVI------KREYDGGEK 540

Query: 601 FSVHDKETSQNDDIDLLECFEHNLPDSPFASPAK--ATGGEHAANDSDDADANPESNLTS 660
                KE S +D ++L E  E +LPDSPFASPA       + A N+  D  +    N  +
Sbjct: 601 GKGSSKEGSDDDTMNLPERLEDSLPDSPFASPAHHLLLFADSADNNGSDLWSPSSDNDDN 540

Query: 661 TSSLEVAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           ++   ++ SF S+N QMPR P    +IGM  G GGPTC VGI
Sbjct: 661 STPSTLSDSFNSFNYQMPRLP----AIGMLPGRGGPTCRVGI 540

[Close]

BLAST of Carg25677 vs. TAIR 10
Match: AT3G51950.2 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 414.1 bits (1063), Expect = 2.3e-115
Identity = 306/702 (43.59%), Postives = 388/702 (55.27%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MD YEATRIV SRIQ+LDPENASKIMG LL+QDHGEKEMIRLAFGPE L+HSVI+K +K+
Sbjct: 1   MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60

Query: 61  LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120
           LGL         + S SP+S   +  S  ++R                       G S  
Sbjct: 61  LGL--------MNCSRSPWSHQDELISPKNNR-----------------------GSS-- 120

Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
                   ++P +LP     ++ G     D+ ++F+L D ++           +++D   
Sbjct: 121 --------LNPASLPF----YANGGRSSRDLTNDFELMDDMN----------SRSTDFLG 180

Query: 181 PPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKPCLYYARG 240
                S S    G G YGGD                         + G G  PC Y+ARG
Sbjct: 181 SVHARSGSCVLDGLG-YGGDS------------------------DLGFGGVPCSYFARG 240

Query: 241 FCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELFRSKSSAQQRLAAASQLMAS 300
           FCKNG SCRF+HS     DGG   VGSPS+IE++          +S   RL  A   M  
Sbjct: 241 FCKNGASCRFVHS-----DGGADLVGSPSRIELL--------RSNSVPPRL--AHHFMTR 300

Query: 301 ANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVN 360
           ++   +S K +N     QQ+D QR AAAAL++G++L K  R  R ER + S      +  
Sbjct: 301 SSLPSFSTKGVNL----QQNDVQR-AAAALMIGDELQKLGR-WRPERIDLS-----AMAC 360

Query: 361 PASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 420
           PASRQIYLTFPADS F+EEDVSNYFS +GPVQDVRIPYQQKRMFGFVTFVYPETVK ILA
Sbjct: 361 PASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILA 420

Query: 421 KGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDRDFSPCGTPTGLDS--RELYDHLQLG 480
           KGNPHFVCD+RVLVKPYKEKGKVPDK    Q  +R+ S    PTGLDS  R++     LG
Sbjct: 421 KGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTERELS----PTGLDSSPRDV-----LG 480

Query: 481 SRMFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKN-QLPHPYNHHRAFSPGSP 540
            R FYN+ QD+L R K E++   ++LQSRRL+NLQLLDVKK+ QL  P N          
Sbjct: 481 GRGFYNNTQDVLWRSKFEEE--ILELQSRRLMNLQLLDVKKHFQLNSPTN---------- 540

Query: 541 IPSPTHSPNPFAQNLIFPTIRSASSCSNSDILRENGPTPPPVTIVSSTDMPRQLSPPANE 600
                HSPNPF+Q+LI                     +P P++++      ++      +
Sbjct: 541 ----IHSPNPFSQSLI---------------------SPRPLSVI------KREYDGGEK 540

Query: 601 FSVHDKETSQNDDIDLLECFEHNLPDSPFASPAK--ATGGEHAANDSDDADANPESNLTS 660
                KE S +D ++L E  E +LPDSPFASPA       + A N+  D  +    N  +
Sbjct: 601 GKGSSKEGSDDDTMNLPERLEDSLPDSPFASPAHHLLLFADSADNNGSDLWSPSSDNDDN 540

Query: 661 TSSLEVAASFKSYNCQMPRFPSSHGSIGMYVGTGGPTCPVGI 696
           ++   ++ SF S+N QMPR P    +IGM  G GGPTC VGI
Sbjct: 661 STPSTLSDSFNSFNYQMPRLP----AIGMLPGRGGPTCRVGI 540

[Close]

BLAST of Carg25677 vs. TAIR 10
Match: AT5G12440.1 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 371.3 bits (952), Expect = 1.7e-102
Identity = 277/688 (40.26%), Postives = 391/688 (56.83%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDS +AT ++ ++I++L+P+ A KI+G+LL+ D G+++++ LA GPE++L S I K +  
Sbjct: 1   MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60

Query: 61  LGLPSTNSPSTTSSSPSPFS------LSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWA 120
           LG+ S NSPS+T +SPSP +      L+ + SS S+             PS  SS+  W+
Sbjct: 61  LGIFSNNSPSSTPTSPSPLNPICRPPLNGRGSSHSNGFMDFR----RNSPSSPSSTSPWS 120

Query: 121 TGFSPELQNSDDHLISPGNLPL----------GSSCFSAGEAPV---TDMIDEFQLQDQL 180
                   N ++  ISP + P+          G S   +G A      D++D+ QL D L
Sbjct: 121 FNNCINGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADLLDDQQLNDCL 180

Query: 181 SFLNEGSPTIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLG 240
           SFL++       K  DL  P + L  S  G G              +HRRS+S  DAS  
Sbjct: 181 SFLDDSCS----KTEDLVDPSIPLDYSVDGDGETH-----------LHRRSFSC-DASFV 240

Query: 241 TEDLNSGLGWKPCLYYARGFCKNGTSCRFLHSGLGD-ADGGGAAVGSPSKIEMMDQCHEL 300
           + D   G G KPC+Y++RG CKNG SC+F+H G  D  DG G    SP K+E   + HE 
Sbjct: 241 SGDDGFGGGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVADSPRKMENFVRQHEE 300

Query: 301 FRSKSSAQQRLAAASQLMASANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFS 360
                 A Q+   ASQ++  A   PY  K ++FLLQQ    +QR     L  G++    S
Sbjct: 301 MMRLKLAYQQQRLASQILGRAPQLPYE-KRMDFLLQQH---AQR--DGGLPFGDERFWSS 360

Query: 361 RSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQ 420
             GRLER E +++      N ASRQIYLTFPADSTFK+EDV+ YFS++G VQDVRIPYQQ
Sbjct: 361 SPGRLERMELAMH-LGDQSNSASRQIYLTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQ 420

Query: 421 KRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKK-----QQQIDR-D 480
           KRMFGFV+F +PETVK++LA+GNPHF+CD+RVLVKPYKEKGKV DKK     QQQI+R +
Sbjct: 421 KRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGN 480

Query: 481 FSPCGTPTGLDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD----IDLQSRRLLNL 540
           +SPC +P+G+D RE  D   LGS+M Y  ++  ++RRK+E  QAD    I+L+ RR +NL
Sbjct: 481 YSPCSSPSGIDPREQSD-FHLGSKMLYERRE--MMRRKIE--QADLLRAIELERRRFINL 540

Query: 541 QLLDVKKNQLPHPYNHHRAFSPGSP-IPSPTHSPNPFAQNLIFPTIRSASSCSNSDILRE 600
           QL + K +      NHHR+FS GSP   S   + +P  Q+     +  A +   +D   E
Sbjct: 541 QLPEFKNSV---TLNHHRSFSVGSPGYFSSAGNQSPDFQS----ELNGADALKVTDDTLE 600

Query: 601 NGPTPPPVTIVSSTDMPRQLSPPANEFSVHDKETSQND--DIDLLECFEHNLPDSPFASP 656
             P P    +V+   +    S  A E      ET++++  D D     E  LP + F  P
Sbjct: 601 LHPYP----VVNPMSVNNSYSNGAKE------ETNKSELLDPDSGSTIELVLPSNLF--P 635

[Close]

BLAST of Carg25677 vs. TAIR 10
Match: AT5G12440.2 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 371.3 bits (952), Expect = 1.7e-102
Identity = 277/688 (40.26%), Postives = 391/688 (56.83%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDS +AT ++ ++I++L+P+ A KI+G+LL+ D G+++++ LA GPE++L S I K +  
Sbjct: 1   MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60

Query: 61  LGLPSTNSPSTTSSSPSPFS------LSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWA 120
           LG+ S NSPS+T +SPSP +      L+ + SS S+             PS  SS+  W+
Sbjct: 61  LGIFSNNSPSSTPTSPSPLNPICRPPLNGRGSSHSNGFMDFR----RNSPSSPSSTSPWS 120

Query: 121 TGFSPELQNSDDHLISPGNLPL----------GSSCFSAGEAPV---TDMIDEFQLQDQL 180
                   N ++  ISP + P+          G S   +G A      D++D+ QL D L
Sbjct: 121 FNNCINGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADLLDDQQLNDCL 180

Query: 181 SFLNEGSPTIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLG 240
           SFL++       K  DL  P + L  S  G G              +HRRS+S  DAS  
Sbjct: 181 SFLDDSCS----KTEDLVDPSIPLDYSVDGDGETH-----------LHRRSFSC-DASFV 240

Query: 241 TEDLNSGLGWKPCLYYARGFCKNGTSCRFLHSGLGD-ADGGGAAVGSPSKIEMMDQCHEL 300
           + D   G G KPC+Y++RG CKNG SC+F+H G  D  DG G    SP K+E   + HE 
Sbjct: 241 SGDDGFGGGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVADSPRKMENFVRQHEE 300

Query: 301 FRSKSSAQQRLAAASQLMASANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFS 360
                 A Q+   ASQ++  A   PY  K ++FLLQQ    +QR     L  G++    S
Sbjct: 301 MMRLKLAYQQQRLASQILGRAPQLPYE-KRMDFLLQQH---AQR--DGGLPFGDERFWSS 360

Query: 361 RSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQ 420
             GRLER E +++      N ASRQIYLTFPADSTFK+EDV+ YFS++G VQDVRIPYQQ
Sbjct: 361 SPGRLERMELAMH-LGDQSNSASRQIYLTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQ 420

Query: 421 KRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKK-----QQQIDR-D 480
           KRMFGFV+F +PETVK++LA+GNPHF+CD+RVLVKPYKEKGKV DKK     QQQI+R +
Sbjct: 421 KRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGN 480

Query: 481 FSPCGTPTGLDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD----IDLQSRRLLNL 540
           +SPC +P+G+D RE  D   LGS+M Y  ++  ++RRK+E  QAD    I+L+ RR +NL
Sbjct: 481 YSPCSSPSGIDPREQSD-FHLGSKMLYERRE--MMRRKIE--QADLLRAIELERRRFINL 540

Query: 541 QLLDVKKNQLPHPYNHHRAFSPGSP-IPSPTHSPNPFAQNLIFPTIRSASSCSNSDILRE 600
           QL + K +      NHHR+FS GSP   S   + +P  Q+     +  A +   +D   E
Sbjct: 541 QLPEFKNSV---TLNHHRSFSVGSPGYFSSAGNQSPDFQS----ELNGADALKVTDDTLE 600

Query: 601 NGPTPPPVTIVSSTDMPRQLSPPANEFSVHDKETSQND--DIDLLECFEHNLPDSPFASP 656
             P P    +V+   +    S  A E      ET++++  D D     E  LP + F  P
Sbjct: 601 LHPYP----VVNPMSVNNSYSNGAKE------ETNKSELLDPDSGSTIELVLPSNLF--P 635

[Close]

BLAST of Carg25677 vs. TAIR 10
Match: AT5G12440.3 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 371.3 bits (952), Expect = 1.7e-102
Identity = 277/688 (40.26%), Postives = 391/688 (56.83%), Query Frame = 0


Query: 1   MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
           MDS +AT ++ ++I++L+P+ A KI+G+LL+ D G+++++ LA GPE++L S I K +  
Sbjct: 1   MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60

Query: 61  LGLPSTNSPSTTSSSPSPFS------LSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWA 120
           LG+ S NSPS+T +SPSP +      L+ + SS S+             PS  SS+  W+
Sbjct: 61  LGIFSNNSPSSTPTSPSPLNPICRPPLNGRGSSHSNGFMDFR----RNSPSSPSSTSPWS 120

Query: 121 TGFSPELQNSDDHLISPGNLPL----------GSSCFSAGEAPV---TDMIDEFQLQDQL 180
                   N ++  ISP + P+          G S   +G A      D++D+ QL D L
Sbjct: 121 FNNCINGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADLLDDQQLNDCL 180

Query: 181 SFLNEGSPTIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLG 240
           SFL++       K  DL  P + L  S  G G              +HRRS+S  DAS  
Sbjct: 181 SFLDDSCS----KTEDLVDPSIPLDYSVDGDGETH-----------LHRRSFSC-DASFV 240

Query: 241 TEDLNSGLGWKPCLYYARGFCKNGTSCRFLHSGLGD-ADGGGAAVGSPSKIEMMDQCHEL 300
           + D   G G KPC+Y++RG CKNG SC+F+H G  D  DG G    SP K+E   + HE 
Sbjct: 241 SGDDGFGGGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVADSPRKMENFVRQHEE 300

Query: 301 FRSKSSAQQRLAAASQLMASANAFPYSPKSINFLLQQQQSDSQRAAAAALIMGEDLHKFS 360
                 A Q+   ASQ++  A   PY  K ++FLLQQ    +QR     L  G++    S
Sbjct: 301 MMRLKLAYQQQRLASQILGRAPQLPYE-KRMDFLLQQH---AQR--DGGLPFGDERFWSS 360

Query: 361 RSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQ 420
             GRLER E +++      N ASRQIYLTFPADSTFK+EDV+ YFS++G VQDVRIPYQQ
Sbjct: 361 SPGRLERMELAMH-LGDQSNSASRQIYLTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQ 420

Query: 421 KRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKK-----QQQIDR-D 480
           KRMFGFV+F +PETVK++LA+GNPHF+CD+RVLVKPYKEKGKV DKK     QQQI+R +
Sbjct: 421 KRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGN 480

Query: 481 FSPCGTPTGLDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD----IDLQSRRLLNL 540
           +SPC +P+G+D RE  D   LGS+M Y  ++  ++RRK+E  QAD    I+L+ RR +NL
Sbjct: 481 YSPCSSPSGIDPREQSD-FHLGSKMLYERRE--MMRRKIE--QADLLRAIELERRRFINL 540

Query: 541 QLLDVKKNQLPHPYNHHRAFSPGSP-IPSPTHSPNPFAQNLIFPTIRSASSCSNSDILRE 600
           QL + K +      NHHR+FS GSP   S   + +P  Q+     +  A +   +D   E
Sbjct: 541 QLPEFKNSV---TLNHHRSFSVGSPGYFSSAGNQSPDFQS----ELNGADALKVTDDTLE 600

Query: 601 NGPTPPPVTIVSSTDMPRQLSPPANEFSVHDKETSQND--DIDLLECFEHNLPDSPFASP 656
             P P    +V+   +    S  A E      ET++++  D D     E  LP + F  P
Sbjct: 601 LHPYP----VVNPMSVNNSYSNGAKE------ETNKSELLDPDSGSTIELVLPSNLF--P 635

The following BLAST results are available for this feature:

BLAST of Carg25677 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030783.1	0.0e+00	100.00	Zinc finger CCCH domain-containing protein 53 [Cucurbita argyrosperma subsp. arg...	[more]
XP_022941629.1	0.0e+00	99.42	zinc finger CCCH domain-containing protein 53-like isoform X2 [Cucurbita moschat...	[more]
XP_022941628.1	0.0e+00	99.14	zinc finger CCCH domain-containing protein 53-like isoform X1 [Cucurbita moschat...	[more]
XP_022988489.1	0.0e+00	98.13	zinc finger CCCH domain-containing protein 53-like isoform X2 [Cucurbita maxima]	[more]
XP_022988464.1	0.0e+00	97.85	zinc finger CCCH domain-containing protein 53-like isoform X1 [Cucurbita maxima]...	[more]

BLAST of Carg25677 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0D3J9	5.2e-141	47.50	Zinc finger CCCH domain-containing protein 53 OS=Oryza sativa subsp. japonica OX...	[more]
Q10M00	1.3e-131	45.23	Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica OX...	[more]
Q10LZ9	7.8e-129	45.74	Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica OX...	[more]
Q9SV09	3.2e-114	43.59	Zinc finger CCCH domain-containing protein 46 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q94CJ8	2.4e-101	40.26	Zinc finger CCCH domain-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg25677 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FNZ7	0.0e+00	99.42	zinc finger CCCH domain-containing protein 53-like isoform X2 OS=Cucurbita mosch...	[more]
A0A6J1FSM5	0.0e+00	99.14	zinc finger CCCH domain-containing protein 53-like isoform X1 OS=Cucurbita mosch...	[more]
A0A6J1JLN7	0.0e+00	98.13	zinc finger CCCH domain-containing protein 53-like isoform X2 OS=Cucurbita maxim...	[more]
A0A6J1JMD8	0.0e+00	97.85	zinc finger CCCH domain-containing protein 53-like isoform X1 OS=Cucurbita maxim...	[more]
A0A5A7STU6	0.0e+00	82.61	Zinc finger CCCH domain-containing protein 53 isoform X2 OS=Cucumis melo var. ma...	[more]

BLAST of Carg25677 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51950.1	2.3e-115	43.59	Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ...	[more]
AT3G51950.2	2.3e-115	43.59	Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ...	[more]
AT5G12440.1	1.7e-102	40.26	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]
AT5G12440.2	1.7e-102	40.26	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]
AT5G12440.3	1.7e-102	40.26	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 365..435 e-value: 3.2E-8 score: 43.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 376..421 e-value: 1.8E-5 score: 24.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 364..440 score: 9.643862
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 230..254 e-value: 0.0016 score: 27.7
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 233..253 e-value: 1.5E-4 score: 21.6
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 228..255 score: 12.943439
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 311..453 e-value: 2.0E-10 score: 42.8
None	No IPR available	GENE3D	4.10.1000.10		coord: 224..290 e-value: 3.4E-5 score: 25.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 529..548
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 562..604
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 562..590
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 622..653
None	No IPR available	PANTHER	PTHR24009	RNA-BINDING (RRM/RBD/RNP MOTIFS)	coord: 1..677
None	No IPR available	PANTHER	PTHR24009:SF3	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED	coord: 1..677
IPR034365	AtC3H46-like, RNA recognition motif	CDD	cd12458	RRM_AtC3H46_like	coord: 366..435 e-value: 1.96337E-39 score: 137.584
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 375..451
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 231..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25677-RA	Carg25677-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding