Carg25602 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25602
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	leucine-rich repeat extensin-like protein 3
Location	Carg_Chr18: 5191794 .. 5193134 (-)
RNA-Seq Expression	Carg25602
Synteny	Carg25602

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTATTACCATTCCTTTTCCCTTCATCCCTTTATCTAAACTTTCTTCCAATCAGCAAACTCATCCATGGCGGACGCCAAGGTATCATATCTCGTTCCTCACGCCACACGCCCCTGTCCTGCTGATTTAGTGTGTGTTTTTGTTTGATTTTTTAATCTATATGTCTCTGTTGAATTTATCAAAATGGGTTTATTGGGCTTTGCAGAAGGTTGTGATCATGATACTTAAAGTGGACCTGCAGTGCCATCGGTGTTATAAGAAGGTCAAGAAAGTTATCTGCAAATTCCCTCGTGAGTACTCTGTTCTTAGACTCTGTTCTTCTACTCTGTTTTTTAGTTTCTGCAAAAAGGAACCGAAACCCAGTTTCTGTTTTGTTCTACAGAAATTCGAGACCAGATTTATGATGAGAAACAAAACCTTGTGATTATCAAAGTGGTTTGTTGTAATCCTGAGAAGCTGAGAGATAAAATTTGCTGTAAGGGCTGTGGGGTTATCAAAAGCATTCAAATCCAAGACCCTGAAATTCCCAAGCCCGTCGATCCTCCGCCGCCCAAAAAAGTCGATCCACCGCCGCCCCAAAAGGTCATCGATTCTCCTCCGCCGAAAAAGCCCGACCCACCTCCGCCCCAGAAGGTCATCGATCCTCCTCCGCCGAAAAAGCCCGACCCACCGCCTCCTCAAAAGGTCGTCGATCCTCCGGCGCCGCCGAAGAAGGCCGATCCTCCACCTCCAGCGCCGCCCAAGAAGGTCGATCCTCCGCCGGTCGTCGTCCAGAATCCCCCACCAGTACAAGCCAAGCTGGTACCAAGGAACACATGCGTGCCGGTTGCAGGGTACCCGCCGGCATACCCGATGGGGGTGTGCTGCAGGGAGTGCTATGAAGGGCGCGGTGGGGGCCCGTGTTACAGTGGGTTCGGTAGGCCGCGCTCATGCTGCGAGGGGTGCGCTTCTGGAAGGCCTATTTACGATAGCTATGGCGGAGGGAGGAGCTGTTACATCAGCCCCTGTGAGTATCTAAATGAAGAAAATGCGACAGGGTGCAGAGTAATGTGAGGCGTTGCAGCTCGTGAATGGTGCCATTGACGTTCATGCGCACCTTATGGTTATATGATAAATAAGGGAGTTCTAATTACATTACAATGTGGCCTGGCCTCACTATAGAGCTCGGTTTTGAGGCTTCAAGGGCGTAACAGAACAATAATTCATTTCATTATGTTCATCTTGGTTATTAGTTTTCAATAATTTAAGATAGTTAAAAACGCTCATTCCTCAATTCCAAAGCTCTGAAATGTCGATGTATGTTTCATTTTTGTGATTTTCAGGGACTAATGAACGAGTAG

mRNA sequence

AATTTATTACCATTCCTTTTCCCTTCATCCCTTTATCTAAACTTTCTTCCAATCAGCAAACTCATCCATGGCGGACGCCAAGAAGGTTGTGATCATGATACTTAAAGTGGACCTGCAGTGCCATCGGTGTTATAAGAAGGTCAAGAAAGTTATCTGCAAATTCCCTCAAATTCGAGACCAGATTTATGATGAGAAACAAAACCTTGTGATTATCAAAGTGGTTTGTTGTAATCCTGAGAAGCTGAGAGATAAAATTTGCTGTAAGGGCTGTGGGGTTATCAAAAGCATTCAAATCCAAGACCCTGAAATTCCCAAGCCCGTCGATCCTCCGCCGCCCAAAAAAGTCGATCCACCGCCGCCCCAAAAGGTCATCGATTCTCCTCCGCCGAAAAAGCCCGACCCACCTCCGCCCCAGAAGGTCATCGATCCTCCTCCGCCGAAAAAGCCCGACCCACCGCCTCCTCAAAAGGTCGTCGATCCTCCGGCGCCGCCGAAGAAGGCCGATCCTCCACCTCCAGCGCCGCCCAAGAAGGTCGATCCTCCGCCGGTCGTCGTCCAGAATCCCCCACCAGTACAAGCCAAGCTGGTACCAAGGAACACATGCGTGCCGGTTGCAGGGTACCCGCCGGCATACCCGATGGGGGTGTGCTGCAGGGAGTGCTATGAAGGGCGCGGTGGGGGCCCGTGTTACAGTGGGTTCGGTAGGCCGCGCTCATGCTGCGAGGGGTGCGCTTCTGGAAGGCCTATTTACGATAGCTATGGCGGAGGGAGGAGCTGTTACATCAGCCCCTGTGAGTATCTAAATGAAGAAAATGCGACAGGGTGCAGAGGACTAATGAACGAGTAG

Coding sequence (CDS)

ATGGCGGACGCCAAGAAGGTTGTGATCATGATACTTAAAGTGGACCTGCAGTGCCATCGGTGTTATAAGAAGGTCAAGAAAGTTATCTGCAAATTCCCTCAAATTCGAGACCAGATTTATGATGAGAAACAAAACCTTGTGATTATCAAAGTGGTTTGTTGTAATCCTGAGAAGCTGAGAGATAAAATTTGCTGTAAGGGCTGTGGGGTTATCAAAAGCATTCAAATCCAAGACCCTGAAATTCCCAAGCCCGTCGATCCTCCGCCGCCCAAAAAAGTCGATCCACCGCCGCCCCAAAAGGTCATCGATTCTCCTCCGCCGAAAAAGCCCGACCCACCTCCGCCCCAGAAGGTCATCGATCCTCCTCCGCCGAAAAAGCCCGACCCACCGCCTCCTCAAAAGGTCGTCGATCCTCCGGCGCCGCCGAAGAAGGCCGATCCTCCACCTCCAGCGCCGCCCAAGAAGGTCGATCCTCCGCCGGTCGTCGTCCAGAATCCCCCACCAGTACAAGCCAAGCTGGTACCAAGGAACACATGCGTGCCGGTTGCAGGGTACCCGCCGGCATACCCGATGGGGGTGTGCTGCAGGGAGTGCTATGAAGGGCGCGGTGGGGGCCCGTGTTACAGTGGGTTCGGTAGGCCGCGCTCATGCTGCGAGGGGTGCGCTTCTGGAAGGCCTATTTACGATAGCTATGGCGGAGGGAGGAGCTGTTACATCAGCCCCTGTGAGTATCTAAATGAAGAAAATGCGACAGGGTGCAGAGGACTAATGAACGAGTAG

Protein sequence

MADAKKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKICCKGCGVIKSIQIQDPEIPKPVDPPPPKKVDPPPPQKVIDSPPPKKPDPPPPQKVIDPPPPKKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAKLVPRNTCVPVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYISPCEYLNEENATGCRGLMNE

Homology

[Close]

BLAST of Carg25602 vs. NCBI nr
Match: KAG7012638.1 (hypothetical protein SDJN02_25390 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 504.2 bits (1297), Expect = 6.6e-139
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MADAKKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPPPKKVDPPPPQKVIDSPPPKKPDPPPPQKVID 120
           DKICCKGCGVIKSIQIQDPEIPKPVDPPPPKKVDPPPPQKVIDSPPPKKPDPPPPQKVID
Sbjct: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPPPKKVDPPPPQKVIDSPPPKKPDPPPPQKVID 120

Query: 121 PPPPKKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAKLVPRNTCV 180
           PPPPKKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAKLVPRNTCV
Sbjct: 121 PPPPKKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAKLVPRNTCV 180

Query: 181 PVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYIS 240
           PVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYIS
Sbjct: 181 PVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYIS 240

Query: 241 PCEYLNEENATGCRGLMNE 260
           PCEYLNEENATGCRGLMNE
Sbjct: 241 PCEYLNEENATGCRGLMNE 259

[Close]

BLAST of Carg25602 vs. NCBI nr
Match: XP_023542910.1 (protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 469.9 bits (1208), Expect = 1.4e-128
Identity = 246/270 (91.11%), Postives = 250/270 (92.59%), Query Frame = 0


Query: 1   MADAKKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKVV+M+LKVDLQCHRCYKKVKKV+CKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKVVLMMLKVDLQCHRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPPPKKVDPPPPQKVIDSPPPKKPDPPPPQKVID 120
           DKICCKGCGVIKSIQIQDPEIPKPVDPPPP+ VDPPPPQKV DSPPPKKPDPPPPQKVID
Sbjct: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPPPQTVDPPPPQKVTDSPPPKKPDPPPPQKVID 120

Query: 121 PPP-----------------PKKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVV 180
           PPP                 PKKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVV
Sbjct: 121 PPPPKKPDPPPPQKVIDPPLPKKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVV 180

Query: 181 QNPPPVQAKLVPRNTCVPVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCAS 240
           QNPPPVQAK VPRNTCVPVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCAS
Sbjct: 181 QNPPPVQAKPVPRNTCVPVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCAS 240

Query: 241 GRPIYDSYGGGRSCYISPCEYLNEENATGC 254
           GRPIYDSYGGGRSCYISPCEYLNEENATGC
Sbjct: 241 GRPIYDSYGGGRSCYISPCEYLNEENATGC 270

[Close]

BLAST of Carg25602 vs. NCBI nr
Match: KAG6573522.1 (hypothetical protein SDJN03_27409, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 464.2 bits (1193), Expect = 7.6e-127
Identity = 241/253 (95.26%), Postives = 241/253 (95.26%), Query Frame = 0


Query: 1   MADAKKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPPPKKVDPPPPQKVIDSPPPKKPDPPPPQKVID 120
           DKICCKGCGVIKSIQIQDPEIPKPVDPPPPKKVDPPPPQKVIDSPPPKKPDPPPPQKVID
Sbjct: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPPPKKVDPPPPQKVIDSPPPKKPDPPPPQKVID 120

Query: 121 PPPPKKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAKLVPRNTCV 180
           PPPPKKPDPPPPQKVVDPPAPPKKA           DPPPVVVQNPPPVQAK VPRNTCV
Sbjct: 121 PPPPKKPDPPPPQKVVDPPAPPKKA-----------DPPPVVVQNPPPVQAKPVPRNTCV 180

Query: 181 PVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYIS 240
           PVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYIS
Sbjct: 181 PVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYIS 240

Query: 241 PCEYLNEENATGC 254
           PCEYLNEENATGC
Sbjct: 241 PCEYLNEENATGC 242

[Close]

BLAST of Carg25602 vs. NCBI nr
Match: XP_023542909.1 (protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 462.2 bits (1188), Expect = 2.9e-126
Identity = 241/258 (93.41%), Postives = 246/258 (95.35%), Query Frame = 0


Query: 5   KKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 64
           +KVV+M+LKVDLQCHRCYKKVKKV+CKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC
Sbjct: 15  QKVVLMMLKVDLQCHRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 74

Query: 65  CKGCGVIKSIQIQDPEIPKPVDPPPPKKV---------DPPPPQKVIDSPPPKKPDPPPP 124
           CKGCGVIKSIQIQDPEIPKPVDPPPP+KV         DPPPPQKVID PPPKKPDPPPP
Sbjct: 75  CKGCGVIKSIQIQDPEIPKPVDPPPPQKVTDSPPPKKPDPPPPQKVIDPPPPKKPDPPPP 134

Query: 125 QKVIDPPPPKKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAKLVP 184
           QKVIDPP PKKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAK VP
Sbjct: 135 QKVIDPPLPKKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAKPVP 194

Query: 185 RNTCVPVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGR 244
           RNTCVPVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGR
Sbjct: 195 RNTCVPVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGR 254

Query: 245 SCYISPCEYLNEENATGC 254
           SCYISPCEYLNEENATGC
Sbjct: 255 SCYISPCEYLNEENATGC 272

[Close]

BLAST of Carg25602 vs. NCBI nr
Match: XP_023542911.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454.1 bits (1167), Expect = 7.9e-124
Identity = 235/249 (94.38%), Postives = 239/249 (95.98%), Query Frame = 0


Query: 5   KKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 64
           +KVV+M+LKVDLQCHRCYKKVKKV+CKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC
Sbjct: 15  QKVVLMMLKVDLQCHRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 74

Query: 65  CKGCGVIKSIQIQDPEIPKPVDPPPPKKVDPPPPQKVIDSPPPKKPDPPPPQKVIDPPPP 124
           CKGCGVIKSIQIQDPEIPKP        VDPPPPQKV DSPPPKKPDPPPPQKVIDPPPP
Sbjct: 75  CKGCGVIKSIQIQDPEIPKP--------VDPPPPQKVTDSPPPKKPDPPPPQKVIDPPPP 134

Query: 125 KKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAKLVPRNTCVPVAG 184
           KKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAK VPRNTCVPVAG
Sbjct: 135 KKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAKPVPRNTCVPVAG 194

Query: 185 YPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYISPCEY 244
           YPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYISPCEY
Sbjct: 195 YPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYISPCEY 254

Query: 245 LNEENATGC 254
           LNEENATGC
Sbjct: 255 LNEENATGC 255

[Close]

BLAST of Carg25602 vs. ExPASy TrEMBL
Match: A0A6J1EBS4 (uncharacterized protein LOC111432597 OS=Cucurbita moschata OX=3662 GN=LOC111432597 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.2e-107
Identity = 207/253 (81.82%), Postives = 209/253 (82.61%), Query Frame = 0


Query: 1   MADAKKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           M DAKKVV M+LKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MVDAKKVVTMVLKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPPPKKVDPPPPQKVIDSPPPKKPDPPPPQKVID 120
           DKICCKGCGVIKSIQIQDPEIPKPVDPP PKKVDPP PQKVIDSPPPKKPDP  PQKV  
Sbjct: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPRPKKVDPPRPQKVIDSPPPKKPDPTSPQKV-- 120

Query: 121 PPPPKKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAKLVPRNTCV 180
                                              VDPPPVVVQNPPPVQAK VPRNTCV
Sbjct: 121 -----------------------------------VDPPPVVVQNPPPVQAKPVPRNTCV 180

Query: 181 PVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYIS 240
           PVAG+PPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYIS
Sbjct: 181 PVAGHPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYIS 216

Query: 241 PCEYLNEENATGC 254
           PCEYLNEENATGC
Sbjct: 241 PCEYLNEENATGC 216

[Close]

BLAST of Carg25602 vs. ExPASy TrEMBL
Match: A0A6J1HVT4 (protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466608 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 5.5e-107
Identity = 209/253 (82.61%), Postives = 214/253 (84.58%), Query Frame = 0


Query: 1   MADAKKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKVV+M+LKVDLQCHRCYKKVKKV+CKFPQIRDQIYDEKQNLV IKVVCCNPEKLR
Sbjct: 1   MADAKKVVLMMLKVDLQCHRCYKKVKKVLCKFPQIRDQIYDEKQNLVTIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPPPKKVDPPPPQKVIDSPPPKKPDPPPPQKVID 120
           DKICCKGCGVIKSIQIQDPEIPKPVDPPP                          QKVID
Sbjct: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPPQL------------------------QKVID 120

Query: 121 PPPPKKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAKLVPRNTCV 180
            P PK PDPPP QKVVDPP+P KKADPPPP PPKKVDPPPVVVQNPPPVQ K VPRN CV
Sbjct: 121 SPLPKNPDPPPSQKVVDPPSPLKKADPPPPTPPKKVDPPPVVVQNPPPVQTKPVPRNPCV 180

Query: 181 PVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYIS 240
           P AGYP AYPMGVCCRECYEGRGGGPCYSG GRPRSCC+GCASGRPIYDSYGGGRSCYIS
Sbjct: 181 PDAGYPRAYPMGVCCRECYEGRGGGPCYSGVGRPRSCCDGCASGRPIYDSYGGGRSCYIS 229

Query: 241 PCEYLNEENATGC 254
           PCEYLNEENATGC
Sbjct: 241 PCEYLNEENATGC 229

[Close]

BLAST of Carg25602 vs. ExPASy TrEMBL
Match: A0A6J1HTH2 (protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466608 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 1.0e-97
Identity = 193/253 (76.28%), Postives = 197/253 (77.87%), Query Frame = 0


Query: 1   MADAKKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKVV+M+LKVDLQCHRCYKKVKKV+CKFPQIRDQIYDEKQNLV IKVVCCNPEKLR
Sbjct: 1   MADAKKVVLMMLKVDLQCHRCYKKVKKVLCKFPQIRDQIYDEKQNLVTIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPPPKKVDPPPPQKVIDSPPPKKPDPPPPQKVID 120
           DKICCKGCGVIKSIQIQDPEIPKPVDPPP         QKVIDSP PK PDPPP QKV  
Sbjct: 61  DKICCKGCGVIKSIQIQDPEIPKPVDPPPQL-------QKVIDSPLPKNPDPPPSQKV-- 120

Query: 121 PPPPKKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAKLVPRNTCV 180
                                              VDPPPVVVQNPPPVQ K VPRN CV
Sbjct: 121 -----------------------------------VDPPPVVVQNPPPVQTKPVPRNPCV 180

Query: 181 PVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYIS 240
           P AGYP AYPMGVCCRECYEGRGGGPCYSG GRPRSCC+GCASGRPIYDSYGGGRSCYIS
Sbjct: 181 PDAGYPRAYPMGVCCRECYEGRGGGPCYSGVGRPRSCCDGCASGRPIYDSYGGGRSCYIS 209

Query: 241 PCEYLNEENATGC 254
           PCEYLNEENATGC
Sbjct: 241 PCEYLNEENATGC 209

[Close]

BLAST of Carg25602 vs. ExPASy TrEMBL
Match: A0A0A0LTA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172590 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.3e-95
Identity = 204/282 (72.34%), Postives = 218/282 (77.30%), Query Frame = 0


Query: 3   DAKKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDK 62
           D KKVV+M+LKVDLQC RCYKKVKKV+CKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDK
Sbjct: 4   DGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDK 63

Query: 63  ICCKGCGVIKSIQIQDPEIPKP-------------VDPPPPKKVDPPPPQKVIDSPPPKK 122
           ICCKGCGVIKSI+I++PE PKP             VDPPP KK DPPPPQKV D PPPKK
Sbjct: 64  ICCKGCGVIKSIEIKEPEPPKPPPPKPADPPPPKKVDPPPSKKPDPPPPQKV-DPPPPKK 123

Query: 123 PDPPPPQKVIDPPPPKKPDPPPPQKVVDPPAPPKKADPPP------------PAPPKKVD 182
            DPPPP+K   PPP K  DPPPPQK  DPP PPKKADPPP            P PPKKVD
Sbjct: 124 ADPPPPKKADTPPPSKAADPPPPQKAADPP-PPKKADPPPPKKVDPPPPKANPPPPKKVD 183

Query: 183 PPPVVVQNPP------PVQAKLVPRNTCVPVAGYPPAYPMGVCCRECYEGRGGGPCYSGF 242
           PPPVVV  P       PVQ +  P N CVPV GYPP YP+GVCCR+C+EGRGGGPCYSGF
Sbjct: 184 PPPVVVPQPTPVPIPVPVQPEPYPVNMCVPVPGYPPGYPIGVCCRQCHEGRGGGPCYSGF 243

Query: 243 GRPRSCCEGCASGRPIYDSYGGGRSCYISPCEYLNEENATGC 254
           G P  CC+GCASGRPIYDSYGGGR CY+S CEYLNEENA+GC
Sbjct: 244 GGPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC 283

[Close]

BLAST of Carg25602 vs. ExPASy TrEMBL
Match: A0A1S3CL41 (leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103502210 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 4.9e-95
Identity = 208/295 (70.51%), Postives = 221/295 (74.92%), Query Frame = 0


Query: 3   DAKKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDK 62
           D KKVV+M+LKVDLQC RCYKKVKKV+CKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDK
Sbjct: 4   DGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDK 63

Query: 63  ICCKGCGVIKSIQIQDPEIPKP--------------VDPPPPKKVDPPPPQKVIDSPPPK 122
           ICCKGCGVIKSI+I++PE PKP              VDPPPPKK DPPPPQKV D PPPK
Sbjct: 64  ICCKGCGVIKSIEIKEPEPPKPPPPKHADPPPPPKKVDPPPPKKPDPPPPQKV-DPPPPK 123

Query: 123 KPDPPPPQKVIDPPPPKKPDPPPPQKVVDP----------------PAPPKKADP----- 182
           K DPPPP+K  DPPPPKKPDPPPP K  DP                PAPPKK DP     
Sbjct: 124 KADPPPPKKA-DPPPPKKPDPPPPSKAADPPPPQKAADPPPPKKADPAPPKKVDPPPAKA 183

Query: 183 -PPPAPPKKVDPPPVVVQN------PPPVQAKLVPRNTCVPVAGYPPAYP--MGVCCREC 242
            PPP PPKKVDPPPVVV        P PVQ +  P N CVPV GYPP YP  +GVCCR+C
Sbjct: 184 EPPPPPPKKVDPPPVVVPQPNPVPIPVPVQPEPYPVNMCVPVPGYPPGYPVGIGVCCRQC 243

Query: 243 YEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYISPCEYLNEENATGC 254
           YEGRGGGPCYSGFG    CC+GCASGRPIYDSYGGGR CY+S CEYLNEENA+GC
Sbjct: 244 YEGRGGGPCYSGFGGTGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC 296

[Close]

BLAST of Carg25602 vs. TAIR 10
Match: AT4G16380.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 147.5 bits (371), Expect = 1.5e-35
Identity = 117/263 (44.49%), Postives = 156/263 (59.32%), Query Frame = 0


Query: 5   KKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 64
           +KV +M LKVDL C +CYKKVKKV+CKFPQIRDQ++DEK N+VIIKVVCC+PE++ DK+C
Sbjct: 7   EKVTMMKLKVDLDCAKCYKKVKKVLCKFPQIRDQLFDEKSNIVIIKVVCCSPERIMDKLC 66

Query: 65  CKGCGVIKSIQIQDPEIPKPVDPPPPKKVDPPPPQKVIDSPP-----PKKPD-PPPPQKV 124
            KG G IK+I+I +P  PKP  P P +     PPQK  D+ P     PK+P+ P  P+K+
Sbjct: 67  SKGGGSIKTIEIVEP--PKPPQPQPQQ-----PPQKPKDAQPKAPEKPKEPEKPKQPEKL 126

Query: 125 IDPPPPKKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAKLVPRNT 184
            +P  PK+P+ P   +    PAP   A  P PAP  K  P P     P P Q    P+  
Sbjct: 127 KEPEKPKQPEKPKEPEKTKQPAP---APAPAPAPAAKPAPAPAPAPAPAPKQPGPPPQAI 186

Query: 185 CVPVAGYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGG---- 244
            +   G P      +CC   Y+G  GGP ++G+G P    E    GRP+Y+S+GGG    
Sbjct: 187 PMMPQGQP-----AMCCGPYYDGY-GGPAFNGYGMPPQPYE--CYGRPVYESWGGGCPPP 246

Query: 245 ----RSCYISPCEYLNEENATGC 254
               R C+++ C+Y +EEN   C
Sbjct: 247 PPAYRQCHVTRCDYFSEENPQSC 251

[Close]

BLAST of Carg25602 vs. TAIR 10
Match: AT4G16380.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.9e-22
Identity = 95/234 (40.60%), Postives = 131/234 (55.98%), Query Frame = 0


Query: 34  QIRDQIYDEKQNLVIIKVVCCNPEKLRDKICCKGCGVIKSIQIQDPEIPKPVDPPPPKKV 93
           +IRDQ++DEK N+VIIKVVCC+PE++ DK+C KG G IK+I+I +P  PKP  P P +  
Sbjct: 15  EIRDQLFDEKSNIVIIKVVCCSPERIMDKLCSKGGGSIKTIEIVEP--PKPPQPQPQQ-- 74

Query: 94  DPPPPQKVIDSPP-----PKKPD-PPPPQKVIDPPPPKKPDPPPPQKVVDPPAPPKKADP 153
              PPQK  D+ P     PK+P+ P  P+K+ +P  PK+P+ P   +    PAP   A  
Sbjct: 75  ---PPQKPKDAQPKAPEKPKEPEKPKQPEKLKEPEKPKQPEKPKEPEKTKQPAP---APA 134

Query: 154 PPPAPPKKVDPPPVVVQNPPPVQAKLVPRNTCVPVAGYPPAYPMGVCCRECYEGRGGGPC 213
           P PAP  K  P P     P P Q    P+   +   G P      +CC   Y+G  GGP 
Sbjct: 135 PAPAPAAKPAPAPAPAPAPAPKQPGPPPQAIPMMPQGQP-----AMCCGPYYDGY-GGPA 194

Query: 214 YSGFGRPRSCCEGCASGRPIYDSYGGG--------RSCYISPCEYLNEENATGC 254
           ++G+G P    E    GRP+Y+S+GGG        R C+++ C+Y +EEN   C
Sbjct: 195 FNGYGMPPQPYE--CYGRPVYESWGGGCPPPPPAYRQCHVTRCDYFSEENPQSC 230

[Close]

BLAST of Carg25602 vs. TAIR 10
Match: AT1G51090.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 3.4e-16
Identity = 88/250 (35.20%), Postives = 114/250 (45.60%), Query Frame = 0


Query: 4   AKKVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKI 63
           A+KVV+M LKVDL C +CYKKVKK I KFPQI D+++DEK N +IIKVVC +PE+L +K+
Sbjct: 2   AEKVVMMKLKVDLNCSKCYKKVKKAIRKFPQITDELFDEKSNTIIIKVVCYDPERLMNKL 61

Query: 64  CCKGCGVIKSIQIQDPEIPKPVDPPPPKKVDPPPPQKVIDSPPPKKPDPPPPQKVIDPPP 123
           C KG G IKSI I                                          ++PP 
Sbjct: 62  CYKGDGSIKSIVI------------------------------------------LEPPK 121

Query: 124 PKKPDPPPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAKLVPRNTCVPVA 183
           P +P P PPQK   P   P +A  P    P    P PV+V +  P            P+ 
Sbjct: 122 PPQPQPQPPQKPTAPAPAPAQAQAPALVRPA---PVPVLVSSSAP-----------QPMP 168

Query: 184 GYPPAYPMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYISPCE 243
            + P +     C   YE +    CY               GRP+Y+S+GGGR C    C 
Sbjct: 182 MWQPYH-----CGPYYEAQ-QYQCY---------------GRPVYESWGGGRQC----CH 168

Query: 244 YLNEENATGC 254
              + N+ GC
Sbjct: 242 --EDMNSQGC 168

[Close]

BLAST of Carg25602 vs. TAIR 10
Match: AT1G49420.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-06
Identity = 56/134 (41.79%), Postives = 76/134 (56.72%), Query Frame = 0


Query: 5   KKVVIMILKVD-LQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKI 64
           +KV  M LK + L   + + KVKK +   PQ+RDQ ++E+ N V IKVVCC+PEK+ DK+
Sbjct: 7   EKVTWMKLKTEPLSNEKNFSKVKKALSSIPQVRDQKFEEETNTVTIKVVCCSPEKVMDKL 66

Query: 65  CCKGCGVIKSIQIQDPE---IPKPVDPPPPKKVD-PPPPQKVIDSPPPKKPDPPPPQKVI 124
           C KG G IK I+  DP      KP +P  PK+ + P  P+K   +  P + D P  Q+V 
Sbjct: 67  CSKGRGAIKLIETIDPAKHVAQKPKEPEKPKEAEKPKEPEKPKPAAAPAQGD-PSSQRVT 126

Query: 125 D--PPPPKKPDPPP 132
               PPP    P P
Sbjct: 127 HGYNPPPMMGHPVP 139

The following BLAST results are available for this feature:

BLAST of Carg25602 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012638.1	6.6e-139	100.00	hypothetical protein SDJN02_25390 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023542910.1	1.4e-128	91.11	protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X2 [Cucurbita pepo subsp. ...	[more]
KAG6573522.1	7.6e-127	95.26	hypothetical protein SDJN03_27409, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023542909.1	2.9e-126	93.41	protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X1 [Cucurbita pepo subsp. ...	[more]
XP_023542911.1	7.9e-124	94.38	leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg25602 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg25602 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBS4	3.2e-107	81.82	uncharacterized protein LOC111432597 OS=Cucurbita moschata OX=3662 GN=LOC1114325...	[more]
A0A6J1HVT4	5.5e-107	82.61	protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A6J1HTH2	1.0e-97	76.28	protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X2 OS=Cucurbita maxima OX=...	[more]
A0A0A0LTA1	1.3e-95	72.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172590 PE=4 SV=1	[more]
A0A1S3CL41	4.9e-95	70.51	leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103502...	[more]

BLAST of Carg25602 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16380.1	1.5e-35	44.49	Heavy metal transport/detoxification superfamily protein	[more]
AT4G16380.2	1.9e-22	40.60	Heavy metal transport/detoxification superfamily protein	[more]
AT1G51090.1	3.4e-16	35.20	Heavy metal transport/detoxification superfamily protein	[more]
AT1G49420.1	1.4e-06	41.79	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00021	PRORICH	coord: 142..150 score: 45.83 coord: 163..172 score: 42.92 coord: 77..89 score: 36.54 coord: 124..130 score: 51.79 coord: 104..113 score: 45.83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..169
None	No IPR available	PANTHER	PTHR47488:SF16	HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN	coord: 4..253
IPR044169	Protein PYRICULARIA ORYZAE RESISTANCE 21	PANTHER	PTHR47488	HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN	coord: 4..253
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 9..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25602-RA	Carg25602-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900150	regulation of defense response to fungus
molecular_function	GO:0046872	metal ion binding