Carg25563 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25563
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	aspartic and glutamic acid-rich protein-like
Location	Carg_Chr07: 4730017 .. 4730967 (+)
RNA-Seq Expression	Carg25563
Synteny	Carg25563

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAACTTTGCACTCTTTATTTCGTGTTGCCTCAAGTGGAGCCTTATGATGCTGTACATCTGCCCGATGATCTTGACGACGGCGAGGAGATTCTTGATGGCGCGATCCCTAGGCGAGAAGTTAAATCCAAATTAACGCCAATGTATTTGCGTTACGGTTACCTAATGGCTGAAAATCTGCCTCCGAACGCTCTTTCTGAGAAGCAGGTTCTTGATCGTTTGCCTGAAGTCGTCGGGGGCGAAGAGGACGAGAACGGAGATTGTGTTTTTGAAATAAATTTTTCTCAAGATAGCTGTAATTATGTCGTACAATTATTTTTTAGTCCGAAAGAGGAATCTGACGACGACGATGAAGATTCACATCACGAAGAAGAGGCTTACGACGATTCCGATAGCGATGATATGGAAGAGATTGGGGAAGATTACGATAGCGATGACATAGAAGAAATTGATGAAGACTACGGTAGTGATGATATGGAAGAAATTGATGAAGATTACGGGAGCGACGATGAACAGAAAGGCGACGAAGAAATAACTGGAAATCGCGTTTTTGAATTGTATTTTCCGCAAGGAGATTGCAATTATGTTGTCCGATTAGTTTTTGTGAATGAAGAAGGAACGAGGTTTCTTGATGAAGGAGAGGAGTTTCTTTTCGTCGGACTGCAGCGATTAGCCGGAATTTCATACGACATAGAAGAATCGGAAGATGAAGTTCCAGTAATTGACAATAAGTCTTCCTCTGCTCTGTCGGAAGTTGTATTGGAGATTTCACGGAGACTGATGGAATCCAAAGTTGGAGAACCTGATGATATTAGAGCAGTAGAATATGCAGAAAAGCAGAGTAGATTCAACAATGAAATTTGTACATTCATCGATCCTCAGATGATATTAGAACGACCTAACTATCTAACAGTGCGTGATCATCTGCAGCTTCACTCTTCCGCCTGA

mRNA sequence

ATGGCAGAACTTTGCACTCTTTATTTCGTGTTGCCTCAAGTGGAGCCTTATGATGCTGTACATCTGCCCGATGATCTTGACGACGGCGAGGAGATTCTTGATGGCGCGATCCCTAGGCGAGAAGTTAAATCCAAATTAACGCCAATGTATTTGCGTTACGGTTACCTAATGGCTGAAAATCTGCCTCCGAACGCTCTTTCTGAGAAGCAGGTTCTTGATCGTTTGCCTGAAGTCGTCGGGGGCGAAGAGGACGAGAACGGAGATTGTGTTTTTGAAATAAATTTTTCTCAAGATAGCTGTAATTATGTCGTACAATTATTTTTTAGTCCGAAAGAGGAATCTGACGACGACGATGAAGATTCACATCACGAAGAAGAGGCTTACGACGATTCCGATAGCGATGATATGGAAGAGATTGGGGAAGATTACGATAGCGATGACATAGAAGAAATTGATGAAGACTACGGTAGTGATGATATGGAAGAAATTGATGAAGATTACGGGAGCGACGATGAACAGAAAGGCGACGAAGAAATAACTGGAAATCGCGTTTTTGAATTGTATTTTCCGCAAGGAGATTGCAATTATGTTGTCCGATTAGTTTTTGTGAATGAAGAAGGAACGAGGTTTCTTGATGAAGGAGAGGAGTTTCTTTTCGTCGGACTGCAGCGATTAGCCGGAATTTCATACGACATAGAAGAATCGGAAGATGAAGTTCCAGTAATTGACAATAAGTCTTCCTCTGCTCTGTCGGAAGTTGTATTGGAGATTTCACGGAGACTGATGGAATCCAAAGTTGGAGAACCTGATGATATTAGAGCAGTAGAATATGCAGAAAAGCAGAGTAGATTCAACAATGAAATTTGTACATTCATCGATCCTCAGATGATATTAGAACGACCTAACTATCTAACAGTGCGTGATCATCTGCAGCTTCACTCTTCCGCCTGA

Coding sequence (CDS)

ATGGCAGAACTTTGCACTCTTTATTTCGTGTTGCCTCAAGTGGAGCCTTATGATGCTGTACATCTGCCCGATGATCTTGACGACGGCGAGGAGATTCTTGATGGCGCGATCCCTAGGCGAGAAGTTAAATCCAAATTAACGCCAATGTATTTGCGTTACGGTTACCTAATGGCTGAAAATCTGCCTCCGAACGCTCTTTCTGAGAAGCAGGTTCTTGATCGTTTGCCTGAAGTCGTCGGGGGCGAAGAGGACGAGAACGGAGATTGTGTTTTTGAAATAAATTTTTCTCAAGATAGCTGTAATTATGTCGTACAATTATTTTTTAGTCCGAAAGAGGAATCTGACGACGACGATGAAGATTCACATCACGAAGAAGAGGCTTACGACGATTCCGATAGCGATGATATGGAAGAGATTGGGGAAGATTACGATAGCGATGACATAGAAGAAATTGATGAAGACTACGGTAGTGATGATATGGAAGAAATTGATGAAGATTACGGGAGCGACGATGAACAGAAAGGCGACGAAGAAATAACTGGAAATCGCGTTTTTGAATTGTATTTTCCGCAAGGAGATTGCAATTATGTTGTCCGATTAGTTTTTGTGAATGAAGAAGGAACGAGGTTTCTTGATGAAGGAGAGGAGTTTCTTTTCGTCGGACTGCAGCGATTAGCCGGAATTTCATACGACATAGAAGAATCGGAAGATGAAGTTCCAGTAATTGACAATAAGTCTTCCTCTGCTCTGTCGGAAGTTGTATTGGAGATTTCACGGAGACTGATGGAATCCAAAGTTGGAGAACCTGATGATATTAGAGCAGTAGAATATGCAGAAAAGCAGAGTAGATTCAACAATGAAATTTGTACATTCATCGATCCTCAGATGATATTAGAACGACCTAACTATCTAACAGTGCGTGATCATCTGCAGCTTCACTCTTCCGCCTGA

Protein sequence

MAELCTLYFVLPQVEPYDAVHLPDDLDDGEEILDGAIPRREVKSKLTPMYLRYGYLMAENLPPNALSEKQVLDRLPEVVGGEEDENGDCVFEINFSQDSCNYVVQLFFSPKEESDDDDEDSHHEEEAYDDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSDDEQKGDEEITGNRVFELYFPQGDCNYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYDIEESEDEVPVIDNKSSSALSEVVLEISRRLMESKVGEPDDIRAVEYAEKQSRFNNEICTFIDPQMILERPNYLTVRDHLQLHSSA

Homology

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BLAST of Carg25563 vs. NCBI nr
Match: KAG7027240.1 (hypothetical protein SDJN02_11251, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 614.8 bits (1584), Expect = 4.3e-172
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 1   MAELCTLYFVLPQVEPYDAVHLPDDLDDGEEILDGAIPRREVKSKLTPMYLRYGYLMAEN 60
           MAELCTLYFVLPQVEPYDAVHLPDDLDDGEEILDGAIPRREVKSKLTPMYLRYGYLMAEN
Sbjct: 1   MAELCTLYFVLPQVEPYDAVHLPDDLDDGEEILDGAIPRREVKSKLTPMYLRYGYLMAEN 60

Query: 61  LPPNALSEKQVLDRLPEVVGGEEDENGDCVFEINFSQDSCNYVVQLFFSPKEESDDDDED 120
           LPPNALSEKQVLDRLPEVVGGEEDENGDCVFEINFSQDSCNYVVQLFFSPKEESDDDDED
Sbjct: 61  LPPNALSEKQVLDRLPEVVGGEEDENGDCVFEINFSQDSCNYVVQLFFSPKEESDDDDED 120

Query: 121 SHHEEEAYDDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSDDEQKGDEEIT 180
           SHHEEEAYDDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSDDEQKGDEEIT
Sbjct: 121 SHHEEEAYDDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSDDEQKGDEEIT 180

Query: 181 GNRVFELYFPQGDCNYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYDIEESEDEVP 240
           GNRVFELYFPQGDCNYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYDIEESEDEVP
Sbjct: 181 GNRVFELYFPQGDCNYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYDIEESEDEVP 240

Query: 241 VIDNKSSSALSEVVLEISRRLMESKVGEPDDIRAVEYAEKQSRFNNEICTFIDPQMILER 300
           VIDNKSSSALSEVVLEISRRLMESKVGEPDDIRAVEYAEKQSRFNNEICTFIDPQMILER
Sbjct: 241 VIDNKSSSALSEVVLEISRRLMESKVGEPDDIRAVEYAEKQSRFNNEICTFIDPQMILER 300

Query: 301 PNYLTVRDHLQLHSSA 317
           PNYLTVRDHLQLHSSA
Sbjct: 301 PNYLTVRDHLQLHSSA 316

[Close]

BLAST of Carg25563 vs. NCBI nr
Match: KAG6595220.1 (hypothetical protein SDJN03_11773, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 611.7 bits (1576), Expect = 3.6e-171
Identity = 315/316 (99.68%), Postives = 315/316 (99.68%), Query Frame = 0


Query: 1   MAELCTLYFVLPQVEPYDAVHLPDDLDDGEEILDGAIPRREVKSKLTPMYLRYGYLMAEN 60
           MAELCTLYFVLPQVEPYDAVHLPDDLDDGEEILDGAIPRREVKSKLT MYLRYGYLMAEN
Sbjct: 1   MAELCTLYFVLPQVEPYDAVHLPDDLDDGEEILDGAIPRREVKSKLTAMYLRYGYLMAEN 60

Query: 61  LPPNALSEKQVLDRLPEVVGGEEDENGDCVFEINFSQDSCNYVVQLFFSPKEESDDDDED 120
           LPPNALSEKQVLDRLPEVVGGEEDENGDCVFEINFSQDSCNYVVQLFFSPKEESDDDDED
Sbjct: 61  LPPNALSEKQVLDRLPEVVGGEEDENGDCVFEINFSQDSCNYVVQLFFSPKEESDDDDED 120

Query: 121 SHHEEEAYDDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSDDEQKGDEEIT 180
           SHHEEEAYDDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSDDEQKGDEEIT
Sbjct: 121 SHHEEEAYDDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSDDEQKGDEEIT 180

Query: 181 GNRVFELYFPQGDCNYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYDIEESEDEVP 240
           GNRVFELYFPQGDCNYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYDIEESEDEVP
Sbjct: 181 GNRVFELYFPQGDCNYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYDIEESEDEVP 240

Query: 241 VIDNKSSSALSEVVLEISRRLMESKVGEPDDIRAVEYAEKQSRFNNEICTFIDPQMILER 300
           VIDNKSSSALSEVVLEISRRLMESKVGEPDDIRAVEYAEKQSRFNNEICTFIDPQMILER
Sbjct: 241 VIDNKSSSALSEVVLEISRRLMESKVGEPDDIRAVEYAEKQSRFNNEICTFIDPQMILER 300

Query: 301 PNYLTVRDHLQLHSSA 317
           PNYLTVRDHLQLHSSA
Sbjct: 301 PNYLTVRDHLQLHSSA 316

[Close]

BLAST of Carg25563 vs. NCBI nr
Match: XP_023518108.1 (nonsense-mediated mRNA decay protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 600.9 bits (1548), Expect = 6.4e-168
Identity = 309/316 (97.78%), Postives = 311/316 (98.42%), Query Frame = 0


Query: 1   MAELCTLYFVLPQVEPYDAVHLPDDLDDGEEILDGAIPRREVKSKLTPMYLRYGYLMAEN 60
           MAELCTLYFVLPQVEPYDAVHLPDDLDDGE+ILDGAIPRREVKSKLTPMYLRYGYLMAEN
Sbjct: 1   MAELCTLYFVLPQVEPYDAVHLPDDLDDGEKILDGAIPRREVKSKLTPMYLRYGYLMAEN 60

Query: 61  LPPNALSEKQVLDRLPEVVGGEEDENGDCVFEINFSQDSCNYVVQLFFSPKEESDDDDED 120
           LPPNAL EKQVLDRLPEVVGGEEDENGDCVFEINFSQD+CNYVVQLFFSPKEESDDDDED
Sbjct: 61  LPPNALCEKQVLDRLPEVVGGEEDENGDCVFEINFSQDNCNYVVQLFFSPKEESDDDDED 120

Query: 121 SHHEEEAYDDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSDDEQKGDEEIT 180
           SHHEEEAYDDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSDDEQKGDEEIT
Sbjct: 121 SHHEEEAYDDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSDDEQKGDEEIT 180

Query: 181 GNRVFELYFPQGDCNYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYDIEESEDEVP 240
           GNRVFELYFPQGDCNYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYDIEESEDEVP
Sbjct: 181 GNRVFELYFPQGDCNYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYDIEESEDEVP 240

Query: 241 VIDNKSSSALSEVVLEISRRLMESKVGEPDDIRAVEYAEKQSRFNNEICTFIDPQMILER 300
            IDNKSSSALSEVV EISRRLMESKVGEPDDIR VE AEKQSRFNNEICTFIDPQMILER
Sbjct: 241 AIDNKSSSALSEVVSEISRRLMESKVGEPDDIRTVEDAEKQSRFNNEICTFIDPQMILER 300

Query: 301 PNYLTVRDHLQLHSSA 317
           PNYLTVRDHLQLHSSA
Sbjct: 301 PNYLTVRDHLQLHSSA 316

[Close]

BLAST of Carg25563 vs. NCBI nr
Match: XP_022972610.1 (nucleolin-like [Cucurbita maxima])

HSP 1 Score: 574.3 bits (1479), Expect = 6.4e-160
Identity = 300/323 (92.88%), Postives = 306/323 (94.74%), Query Frame = 0


Query: 1   MAELCTLYFVLPQVEPYDAVHLPDDLDDGEEILDGAIPRREVKSKLTPMYLRYGYLMAEN 60
           MAELCTLYFVLPQVEPYDAVHLPDDLDDGE+ILDGAIPRREVKSKLTPMYLRYGYLMAEN
Sbjct: 1   MAELCTLYFVLPQVEPYDAVHLPDDLDDGEKILDGAIPRREVKSKLTPMYLRYGYLMAEN 60

Query: 61  LPPNALSEKQVLDRLPEVVGGEEDENGDCVFEINFSQDSCNYVVQLFFSPKEESDDDDED 120
           LPPNALSEKQVLDRLPEVVGGEEDENGDCVFEINFSQ++CNYVVQLFFSPKEESDDDDED
Sbjct: 61  LPPNALSEKQVLDRLPEVVGGEEDENGDCVFEINFSQENCNYVVQLFFSPKEESDDDDED 120

Query: 121 SHHEEEAYDDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSD-------DEQ 180
           SH EEEAY DSDS+DMEEIGEDYDSDD+EEIDEDY SDDMEEIDEDYGSD       DEQ
Sbjct: 121 SHQEEEAYQDSDSNDMEEIGEDYDSDDMEEIDEDYDSDDMEEIDEDYGSDDEKESYEDEQ 180

Query: 181 KGDEEITGNRVFELYFPQGDCNYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYDIE 240
           KGDEE+TGNRVFELYFPQGD NYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYDIE
Sbjct: 181 KGDEELTGNRVFELYFPQGDRNYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYDIE 240

Query: 241 ESEDEVPVIDNKSSSALSEVVLEISRRLMESKVGEPDDIRAVEYAEKQSRFNNEICTFID 300
           E EDEVP IDNKSSSALSEVV EISRRLMESKVGEPDDIR  E AEKQSRFNNEICTFID
Sbjct: 241 ELEDEVPAIDNKSSSALSEVVSEISRRLMESKVGEPDDIRTAEEAEKQSRFNNEICTFID 300

Query: 301 PQMILERPNYLTVRDHLQLHSSA 317
           PQMILERPNYLTVRDHLQLHSSA
Sbjct: 301 PQMILERPNYLTVRDHLQLHSSA 323

[Close]

BLAST of Carg25563 vs. NCBI nr
Match: XP_038882299.1 (aspartic and glutamic acid-rich protein-like [Benincasa hispida])

HSP 1 Score: 251.1 bits (640), Expect = 1.2e-62
Identity = 173/322 (53.73%), Postives = 209/322 (64.91%), Query Frame = 0


Query: 10  VLPQVEPYDAVHLPDDLDDGEEILDGAIPRREVKSKLTPMYLRYGYLMAENLPPNALSEK 69
           V+P+VEPYDAVH   DLDDGE+ L GAI RR   SKL PM LRYG+++A+N PP+A SEK
Sbjct: 25  VMPRVEPYDAVH-SADLDDGEKFLAGAIRRRGENSKLPPMCLRYGHILADNQPPDATSEK 84

Query: 70  QV-LDRLP----EVVGGEEDENGDCVFEINFSQDSCNYVVQLFFSPKEESDDDDEDSHHE 129
           Q  L   P    EV+GG+E+E+G+ VFEI FSQD+ +Y+V+L F P  E    DEDS  E
Sbjct: 85  QQDLYCSPEVDGEVLGGQENEHGERVFEIYFSQDNHDYLVKLAFGPVNEL--SDEDSQQE 144

Query: 130 EEAYDDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSDDEQKGDEEITGNRV 189
           E            E+  D+ SDD EE  EDY +DD    DE+   D++   DEE+TGNRV
Sbjct: 145 E-----------GELESDFYSDDGEETYEDYENDD---YDEETFEDEQSDNDEELTGNRV 204

Query: 190 FELYFPQGDCNYVVRLVFVNEE-GTRFLDEGEEFLFVGLQRLAGISYDIEESEDEVPVID 249
            ELYFP GDC YVVRLVF  EE   RFL+E +EFLF  LQR AGISY      DEVP I+
Sbjct: 205 CELYFP-GDCYYVVRLVFEKEEDDDRFLEEEDEFLFKKLQRAAGISY----GGDEVPAIE 264

Query: 250 NKSSSALSEVVLEISRRLMESKVGEPDDIRAVEYAEKQSRFNNEI------CTFIDPQMI 309
           NKS S L E+V E SR+LME K+ + DDIR +EY E  +   N I       TF+DP MI
Sbjct: 265 NKSFSDLPEIVSENSRKLMELKIEDRDDIR-IEYPETANEIKNGIDEDQSSGTFVDPLMI 323

Query: 310 LERPNYLTVR---DHLQLHSSA 317
           LE+ N+L  R   DHLQLHSSA
Sbjct: 325 LEQQNHLIARIVCDHLQLHSSA 323

[Close]

BLAST of Carg25563 vs. ExPASy TrEMBL
Match: A0A6J1I947 (nucleolin-like OS=Cucurbita maxima OX=3661 GN=LOC111471147 PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.1e-160
Identity = 300/323 (92.88%), Postives = 306/323 (94.74%), Query Frame = 0


Query: 1   MAELCTLYFVLPQVEPYDAVHLPDDLDDGEEILDGAIPRREVKSKLTPMYLRYGYLMAEN 60
           MAELCTLYFVLPQVEPYDAVHLPDDLDDGE+ILDGAIPRREVKSKLTPMYLRYGYLMAEN
Sbjct: 1   MAELCTLYFVLPQVEPYDAVHLPDDLDDGEKILDGAIPRREVKSKLTPMYLRYGYLMAEN 60

Query: 61  LPPNALSEKQVLDRLPEVVGGEEDENGDCVFEINFSQDSCNYVVQLFFSPKEESDDDDED 120
           LPPNALSEKQVLDRLPEVVGGEEDENGDCVFEINFSQ++CNYVVQLFFSPKEESDDDDED
Sbjct: 61  LPPNALSEKQVLDRLPEVVGGEEDENGDCVFEINFSQENCNYVVQLFFSPKEESDDDDED 120

Query: 121 SHHEEEAYDDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSD-------DEQ 180
           SH EEEAY DSDS+DMEEIGEDYDSDD+EEIDEDY SDDMEEIDEDYGSD       DEQ
Sbjct: 121 SHQEEEAYQDSDSNDMEEIGEDYDSDDMEEIDEDYDSDDMEEIDEDYGSDDEKESYEDEQ 180

Query: 181 KGDEEITGNRVFELYFPQGDCNYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYDIE 240
           KGDEE+TGNRVFELYFPQGD NYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYDIE
Sbjct: 181 KGDEELTGNRVFELYFPQGDRNYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYDIE 240

Query: 241 ESEDEVPVIDNKSSSALSEVVLEISRRLMESKVGEPDDIRAVEYAEKQSRFNNEICTFID 300
           E EDEVP IDNKSSSALSEVV EISRRLMESKVGEPDDIR  E AEKQSRFNNEICTFID
Sbjct: 241 ELEDEVPAIDNKSSSALSEVVSEISRRLMESKVGEPDDIRTAEEAEKQSRFNNEICTFID 300

Query: 301 PQMILERPNYLTVRDHLQLHSSA 317
           PQMILERPNYLTVRDHLQLHSSA
Sbjct: 301 PQMILERPNYLTVRDHLQLHSSA 323

[Close]

BLAST of Carg25563 vs. ExPASy TrEMBL
Match: A0A1S4E4H4 (aspartic and glutamic acid-rich protein-like OS=Cucumis melo OX=3656 GN=LOC107991912 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.3e-41
Identity = 137/309 (44.34%), Postives = 175/309 (56.63%), Query Frame = 0


Query: 14  VEPYDAVHLPDDLDDGEEILDGAIPRREVKSKLTPMYLRYGYLMAENLP-PNALSEKQVL 73
           ++P D VH P ++DD E+ L G   R    SK  PM L YG+++AEN P  +A   KQ L
Sbjct: 1   MDPSDTVH-PANVDDREDFLSGPNRRGRENSKSPPMCLLYGHILAENQPSDDAAFGKQDL 60

Query: 74  ----DRLPEVVGGEEDENGDCVFEINFSQDSCNYVVQLFFSPKEESDDDDEDSHHEEEAY 133
               +    ++GG+E+E G CVF+I FSQD+ +Y+V+L F P  E    DEDS  EE   
Sbjct: 61  YCSFEANGVILGGQENEQGQCVFDIYFSQDNRDYLVKLVFGPMLEL--SDEDSQQEE--- 120

Query: 134 DDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSDDEQKGDEEITGNRVFELY 193
                    E+  D+  DD EE  EDY +D  EEI E     DEQ  D E+TG RV  LY
Sbjct: 121 --------RELESDFYCDDGEETYEDYENDSDEEIFE-----DEQSDDPELTGYRVCNLY 180

Query: 194 FPQGDCNYVVRLVFVNEEG-TRFLDEGEEFLFVGLQRLAGISYD--IEESEDEVPVIDNK 253
           FP G+  YVVRLVF  EEG  RFL+E + FLF  LQR A ISYD   EE E+E+P  D+K
Sbjct: 181 FP-GERYYVVRLVFEEEEGEDRFLEEDDRFLFKKLQRAAEISYDGEEEEEEEEIPATDDK 240

Query: 254 SSSALSEVVLEISRRLMESKVGEPDDIRAVEYAEKQSRFNN-------EICTFIDPQMIL 308
           SS  L E+V E S +LME K+ E DD   +E+ E      N           F+DP +IL
Sbjct: 241 SSGDLPEIVSENSSKLMELKIEEHDDDVRIEHPETAKGTENGNNDQDQSSGNFVDPLIIL 289

[Close]

BLAST of Carg25563 vs. ExPASy TrEMBL
Match: A0A5D3CAJ3 (Aspartic and glutamic acid-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00440 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 3.5e-39
Identity = 134/307 (43.65%), Postives = 173/307 (56.35%), Query Frame = 0


Query: 14  VEPYDAVHLPDDLDDGEEILDGAIPRREVKSKLTPMYLRYGYLMAENLP-PNALSEKQVL 73
           ++P D VH P ++DD E+ L GA  R    SK  PM L YG+++AEN P  +A   KQ L
Sbjct: 1   MDPSDTVH-PANVDDREDFLSGANRRGRENSKSPPMCLLYGHILAENQPSDDAAFGKQDL 60

Query: 74  ----DRLPEVVGGEEDENGDCVFEINFSQDSCNYVVQLFFSPKEESDDDDEDSHHEEEAY 133
               +    ++GG+E+E G CVF+I FSQD+ +Y+V+L F    E    DEDS  EE   
Sbjct: 61  YCSFEANGVILGGQENEQGQCVFDIYFSQDNRDYLVKLVFGQMLEL--SDEDSQQEE--- 120

Query: 134 DDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSDDEQKGDEEITGNRVFELY 193
                    E+  D+  DD EE  ED  +D  EEI E     DEQ  D E+TG RV  LY
Sbjct: 121 --------RELESDFYCDDGEETYEDSENDSDEEIFE-----DEQSDDPELTGYRVCNLY 180

Query: 194 FPQGDCNYVVRLVFVNEEG-TRFLDEGEEFLFVGLQRLAGISYDIEESEDEVPVIDNKSS 253
           FP G+  YVVRLVF  EEG  RFL+E + FLF  LQR A ISYD EE E+E+P  D+KSS
Sbjct: 181 FP-GERYYVVRLVFEEEEGEDRFLEEDDRFLFKKLQRAAEISYDGEE-EEEIPATDDKSS 240

Query: 254 SALSEVVLEISRRLMESKVGEPDDIRAVEYAEKQSRFNN-------EICTFIDPQMILER 308
             L E+V E S +L + K+ E DD   +E+ E      N           F+DP +ILE+
Sbjct: 241 GDLPEIVSENSSKLKQLKIEEHDDDVRIEHPETAKGAENGNNDQDQSSGNFVDPLIILEQ 286

[Close]

BLAST of Carg25563 vs. ExPASy TrEMBL
Match: A0A5A7VBJ2 (Aspartic and glutamic acid-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00100 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 6.0e-39
Identity = 136/307 (44.30%), Postives = 174/307 (56.68%), Query Frame = 0


Query: 14  VEPYDAVHLPDDLDDGEEILDGAIPRREVKSKLTPMYLRYGYLMAENLP-PNALSEKQVL 73
           ++P D VH P ++DD E+ L GA  R    SK  PM L YG+++AEN P  +A   KQ L
Sbjct: 1   MDPSDTVH-PANVDDREDFLSGANRRGRENSKSPPMCLLYGHILAENQPSDDAAFGKQDL 60

Query: 74  ----DRLPEVVGGEEDENGDCVFEINFSQDSCNYVVQLFFSPKEESDDDDEDSHHEEEAY 133
               +    ++GG+E+E G CVF+I FSQD+ +Y+V+L F    E    DEDS  EE   
Sbjct: 61  YCSFEANGVILGGQENEQGQCVFDIYFSQDNRDYLVKLVFGQMLEL--SDEDSQQEE--- 120

Query: 134 DDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSDDEQKGDEEITGNRVFELY 193
                    E+  D+  DD EE  ED  +D  EEI E     DEQ  D E+TG RV  LY
Sbjct: 121 --------RELESDFYCDDGEETYEDSENDSDEEIFE-----DEQSDDPELTGYRVCNLY 180

Query: 194 FPQGDCNYVVRLVFVNEEG-TRFLDEGEEFLFVGLQRLAGISYDIEESEDEVPVIDNKSS 253
           FP G+  YVVRLVF  EEG  RFL+E + FLF  LQR A ISYD EE E+E+P  D+KSS
Sbjct: 181 FP-GERYYVVRLVFEEEEGEDRFLEEDDRFLFKKLQRAADISYDGEE-EEEIPATDDKSS 240

Query: 254 SALSEVVLEISRRLMESKVGEPDD---IRAVEYAEKQSRFNNE----ICTFIDPQMILER 308
             L E+V E S +L + K+ E DD   I   E AE     NN+       F+DP + LE+
Sbjct: 241 GDLPEIVSENSSKLKQLKIEEHDDDVRIEHPETAEGTENGNNDQDQSSGNFVDPLITLEQ 286

[Close]

BLAST of Carg25563 vs. ExPASy TrEMBL
Match: A0A0A0KER9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G448080 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.0e-30
Identity = 119/291 (40.89%), Postives = 152/291 (52.23%), Query Frame = 0


Query: 14  VEPYDAVHLPDDLDDGEEILDGAIPRREVKSKLTPMYLRYGYLMAENLPPNALSEK-QVL 73
           ++P +A+H P ++ DG+  L  A        K  PM L YGY++A N P +  + K Q L
Sbjct: 25  MDPSNALH-PANVYDGDHFLPAANTSLREIPKSPPMCLLYGYILAGNQPSDHAAFKIQYL 84

Query: 74  ----DRLPEVVGGEEDENGDCVFEINFSQDSCNYVVQLFFSPKEESDDDDEDSHHEEEAY 133
               +   E+ GG+E+E+G+CVF+I FSQD  +Y+V+L F P  E    DEDS  EE   
Sbjct: 85  SCSFEDNGEIFGGQENEHGECVFDIYFSQDDNDYLVKLVFGPVLEL--SDEDSQQEE--- 144

Query: 134 DDSDSDDMEEIGEDYDSDDIEEIDEDYGSDDMEEIDEDYGSDDEQKGDEEITGNRVFELY 193
                               EE++ D+  D  EEI ED  SDD    + E  G R+  LY
Sbjct: 145 --------------------EELESDHSYDYDEEIFEDEQSDD----NLEPVGYRICNLY 204

Query: 194 FPQGDCNYVVRLVFVNEEGTRFLDEGEEFLFVGLQRLAGISYD-----------IEESED 253
           FP GD  YVVRLVF NEE  RFL + +EFLF  LQR AGIS D            EE E+
Sbjct: 205 FP-GDFYYVVRLVFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEE 264

Query: 254 EVPVIDNKSSSALSEVVLEISRRLMESKVGEPDDIRAVEYAEKQSRFNNEI 289
            VP I +KSS  L E+V E S +LME K+ E DD   VE  E      N I
Sbjct: 265 AVPTIVDKSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPETGKGTENGI 284

The following BLAST results are available for this feature:

BLAST of Carg25563 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027240.1	4.3e-172	100.00	hypothetical protein SDJN02_11251, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6595220.1	3.6e-171	99.68	hypothetical protein SDJN03_11773, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023518108.1	6.4e-168	97.78	nonsense-mediated mRNA decay protein 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022972610.1	6.4e-160	92.88	nucleolin-like [Cucurbita maxima]	[more]
XP_038882299.1	1.2e-62	53.73	aspartic and glutamic acid-rich protein-like [Benincasa hispida]	[more]

BLAST of Carg25563 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg25563 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I947	3.1e-160	92.88	nucleolin-like OS=Cucurbita maxima OX=3661 GN=LOC111471147 PE=4 SV=1	[more]
A0A1S4E4H4	1.3e-41	44.34	aspartic and glutamic acid-rich protein-like OS=Cucumis melo OX=3656 GN=LOC10799...	[more]
A0A5D3CAJ3	3.5e-39	43.65	Aspartic and glutamic acid-rich protein-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A5A7VBJ2	6.0e-39	44.30	Aspartic and glutamic acid-rich protein-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A0A0KER9	3.0e-30	40.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G448080 PE=4 SV=1	[more]

BLAST of Carg25563 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25563-RA	Carg25563-RA	mRNA