Carg25542 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25542
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	KAT8 regulatory NSL complex subunit 2
Location	Carg_Chr17: 8957791 .. 8959916 (+)
RNA-Seq Expression	Carg25542
Synteny	Carg25542

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAATCAAACTCGCCTGGTTCGTTTCAATCTCCTCCTGCTCCCCCACATCCTATGGTTATTGATGGGGCGAATCATGATCTAGCTCTAGCCTCTTGTGAGTTTTTTACTCGTCGAGAAGTACTCGAGCGTCGGTCCCGGAGAGTGAAACAACTTTGTCGAGTATATAGGGAACTGTACTGGGCTTTAATGGAGGAACTCAAGCGCAAGTACAGGGAGTATTATTGGACATATGGCAAGAGTCCATTTAAGGAGGACGAGAAGGAGGCTGAGGGCATTGGTGATTATCCAGAGGGTATTGGGGAGAACGGAAAGCTAGGATTAGGTTCTGTGACCGGGAGTGATGAGATTAGAAGGTGTGATGTCACAGGTTGCAAGGCAAAGGCGATGGCATTGACAAAATACTGTCATGCTCATATCCTCTCGGATAAAAAGCAGAGGCTCTACAAGGGTTGCACCTTTGTAATCAAGAGGTTTGCATTCTATATCAATTATTTTCGCTGCTTAGTAATACTATGAGTTTTCTACTTAATAAGCAATAGCCATAAATATAGACTCGTCTAGTATTGATATCATTACGATGATTTATAAGTATCTTGAGTTTCTTCTTCTCTTTGGACTGTCTTAAGATATAATTTTGCTAGAGCTCGTCCGAGTAGATCCTAAGGTTAAAGGCTGTATAAAAGCTTTTCTAATGCTGAAGTCTCCCCAAATTCCTATTGTAGAATGTAGCACCATTTCCAATCCTCTTAGTTAAAGAGCAATGGTTATCATCTATCTACTACTTGAATTTACCAAGTGAAAACCATGTGGTAAGAAACCAACCAAGCTTATTACAATATTTACAGCAAATTTGTTGCCCCAAGGCCCCTATAGGCTGTTTTTTGTGTCCCAATCCCAAATTATGAGGGCAATGTAAGTGAGCTGAATCTAATTAATGAAATGCAGCCTCCCTTAGGATCTGCTCTATTACGGCCCAAGCCTACCGCTAGCCGATATTGTCCTCTTTGAGCTTTCCCTTTAGGCTTCCCCTCAAGGTTTTTGAAACGCATCTGTGAGGAGGTTTCCATACCCTTGTAAAGAATGCTTCATTATCCTCCTCAACCGATGTGGGATTTCACATGCTCCTTCCCAAAGAACTCTCGAATATTTGTAGTGATCCTTGTCATTCCCTCTGTATGTTTAATGATTTTTTTTATAATTGGAAGGTAGTCAACATGGTTGAGCTGAATTAGATGGTCACACCTTTTTGATTGCATTGATCCAAAGTTGATGTCCGCACACTTTGGTTAAGCTTTTATTTTTCATTTGGGGTCTTTTGTATTTGTATCCTTCCCTGGAATTAGAAGCAATGTACATTGACATTCGGTATAATGGGTTGGCATAGATGTGTTGTGTTGAGGAAACTATGTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTTTTCGTTAACAAGAAATTCGCTTTCATTTGCAGTATGCAGTCCGGACCGCTTCTATGTTCAAAGCCTGTTTTAAGATCTACTGTTCCTTGCTACTGCCCTGGTCATCTACAAAAAGGCGAAAAGTGTTTAGCTAGAGATTTAAGAAAGGCAGGTCTTAACGTCTCGTCGACTAGTAAACTTCGTCCTGATTTCCATGTATTAGTAGCTGAATGCGTTCGCCAGATACAAGTCAAAAGAAGGGCGGCGAGAAAGGCCACTGCTGTTAAAATTGAAAGCAACTGAGAAGGTGAAGACTAGTCGTTAGGCCCCTCAGTTTGAATAAGAACATGTTGCAGTTGGTACATGTGTATTCAATCCAACCCGAAACCCCCAATGGAAGAATTGTTGATAAAACCAATTTTCGTGTACGATCCAATCCCTTGTTCCTTCCTCTCCCTCGCTGCACATTTGTTGTGTAATATTCGAGCAAAAGGTCGATGCAATGTGCAGATGATTAGCAGATTGCAGGGATGTACATTCCTTCTCTTGTTTTATGAAAGGACCGATTTAGTGTCAGCTTCCTTCTCTACAGGGTTTGATGGTATCATTTTTCCCAACTTGCAATAAAGGATTATAATCAATAGCTCGAGACGAAAATGATTGTTCGTAGAAGAAAGCCTACAGTTCGGTAATTTCGTTTT

mRNA sequence

ATGGCAGAATCAAACTCGCCTGGTTCGTTTCAATCTCCTCCTGCTCCCCCACATCCTATGGTTATTGATGGGGCGAATCATGATCTAGCTCTAGCCTCTTGTGAGTTTTTTACTCGTCGAGAAGTACTCGAGCGTCGGTCCCGGAGAGTGAAACAACTTTGTCGAGTATATAGGGAACTGTACTGGGCTTTAATGGAGGAACTCAAGCGCAAGTACAGGGAGTATTATTGGACATATGGCAAGAGTCCATTTAAGGAGGACGAGAAGGAGGCTGAGGGCATTGGTGATTATCCAGAGGGTATTGGGGAGAACGGAAAGCTAGGATTAGGTTCTGTGACCGGGAGTGATGAGATTAGAAGGTGTGATGTCACAGGTTGCAAGGCAAAGGCGATGGCATTGACAAAATACTGTCATGCTCATATCCTCTCGGATAAAAAGCAGAGGCTCTACAAGGGTTGCACCTTTGTAATCAAGAGTATGCAGTCCGGACCGCTTCTATGTTCAAAGCCTGTTTTAAGATCTACTGTTCCTTGCTACTGCCCTGGTCATCTACAAAAAGGCGAAAAGTGTTTAGCTAGAGATTTAAGAAAGGCAGGTCTTAACGTCTCGTCGACTAGTAAACTTCGTCCTGATTTCCATGTATTAGTAGCTGAATGCGTTCGCCAGATACAAGTCAAAAGAAGGGCGGCGAGAAAGGCCACTGCTGTTAAAATTGAAAGCAACTGAGAAGGTGAAGACTAGTCGTTAGGCCCCTCAGTTTGAATAAGAACATGTTGCAGTTGGTACATGTGTATTCAATCCAACCCGAAACCCCCAATGGAAGAATTGTTGATAAAACCAATTTTCGTGTACGATCCAATCCCTTGTTCCTTCCTCTCCCTCGCTGCACATTTGTTGTGTAATATTCGAGCAAAAGGTCGATGCAATGTGCAGATGATTAGCAGATTGCAGGGATGTACATTCCTTCTCTTGTTTTATGAAAGGACCGATTTAGTGTCAGCTTCCTTCTCTACAGGGTTTGATGGTATCATTTTTCCCAACTTGCAATAAAGGATTATAATCAATAGCTCGAGACGAAAATGATTGTTCGTAGAAGAAAGCCTACAGTTCGGTAATTTCGTTTT

Coding sequence (CDS)

ATGGCAGAATCAAACTCGCCTGGTTCGTTTCAATCTCCTCCTGCTCCCCCACATCCTATGGTTATTGATGGGGCGAATCATGATCTAGCTCTAGCCTCTTGTGAGTTTTTTACTCGTCGAGAAGTACTCGAGCGTCGGTCCCGGAGAGTGAAACAACTTTGTCGAGTATATAGGGAACTGTACTGGGCTTTAATGGAGGAACTCAAGCGCAAGTACAGGGAGTATTATTGGACATATGGCAAGAGTCCATTTAAGGAGGACGAGAAGGAGGCTGAGGGCATTGGTGATTATCCAGAGGGTATTGGGGAGAACGGAAAGCTAGGATTAGGTTCTGTGACCGGGAGTGATGAGATTAGAAGGTGTGATGTCACAGGTTGCAAGGCAAAGGCGATGGCATTGACAAAATACTGTCATGCTCATATCCTCTCGGATAAAAAGCAGAGGCTCTACAAGGGTTGCACCTTTGTAATCAAGAGTATGCAGTCCGGACCGCTTCTATGTTCAAAGCCTGTTTTAAGATCTACTGTTCCTTGCTACTGCCCTGGTCATCTACAAAAAGGCGAAAAGTGTTTAGCTAGAGATTTAAGAAAGGCAGGTCTTAACGTCTCGTCGACTAGTAAACTTCGTCCTGATTTCCATGTATTAGTAGCTGAATGCGTTCGCCAGATACAAGTCAAAAGAAGGGCGGCGAGAAAGGCCACTGCTGTTAAAATTGAAAGCAACTGA

Protein sequence

MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYRELYWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRRCDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYCPGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIESN

Homology

[Close]

BLAST of Carg25542 vs. NCBI nr
Match: XP_022953677.1 (INO80 complex subunit D-like [Cucurbita moschata] >XP_022991632.1 INO80 complex subunit D-like [Cucurbita maxima] >XP_023548640.1 INO80 complex subunit D-like [Cucurbita pepo subsp. pepo] >KAG7014493.1 INO80 complex subunit D, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 490.0 bits (1260), Expect = 1.2e-134
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60
           MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL
Sbjct: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60

Query: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120
           YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR
Sbjct: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120

Query: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180
           CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC
Sbjct: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180

Query: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 240
           PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES
Sbjct: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 240

Query: 241 N 242
           N
Sbjct: 241 N 241

[Close]

BLAST of Carg25542 vs. NCBI nr
Match: KAG6575969.1 (INO80 complex subunit D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 490.0 bits (1260), Expect = 1.2e-134
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60
           MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL
Sbjct: 49  MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 108

Query: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120
           YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR
Sbjct: 109 YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 168

Query: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180
           CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC
Sbjct: 169 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 228

Query: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 240
           PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES
Sbjct: 229 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 288

Query: 241 N 242
           N
Sbjct: 289 N 289

[Close]

BLAST of Carg25542 vs. NCBI nr
Match: XP_038896100.1 (INO80 complex subunit D-like isoform X2 [Benincasa hispida] >XP_038896101.1 INO80 complex subunit D-like isoform X2 [Benincasa hispida])

HSP 1 Score: 436.0 bits (1120), Expect = 2.1e-118
Identity = 216/241 (89.63%), Postives = 226/241 (93.78%), Query Frame = 0


Query: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60
           MAES+SPGSFQ PP  P P++IDGA+ D ALA+ E   RREVLERRSRRVKQLCR+ +++
Sbjct: 1   MAESSSPGSFQPPPVTPLPILIDGADRDRALAASEVCARREVLERRSRRVKQLCRILKQV 60

Query: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120
           YW L+EELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR
Sbjct: 61  YWFLLEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120

Query: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180
           CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC
Sbjct: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180

Query: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 240
           PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAE VRQIQ KRRA RKATAVKIES
Sbjct: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAEFVRQIQSKRRATRKATAVKIES 240

Query: 241 N 242
           N
Sbjct: 241 N 241

[Close]

BLAST of Carg25542 vs. NCBI nr
Match: XP_038896099.1 (uncharacterized protein LOC120084404 isoform X1 [Benincasa hispida])

HSP 1 Score: 436.0 bits (1120), Expect = 2.1e-118
Identity = 216/241 (89.63%), Postives = 226/241 (93.78%), Query Frame = 0


Query: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60
           MAES+SPGSFQ PP  P P++IDGA+ D ALA+ E   RREVLERRSRRVKQLCR+ +++
Sbjct: 107 MAESSSPGSFQPPPVTPLPILIDGADRDRALAASEVCARREVLERRSRRVKQLCRILKQV 166

Query: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120
           YW L+EELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR
Sbjct: 167 YWFLLEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 226

Query: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180
           CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC
Sbjct: 227 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 286

Query: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 240
           PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAE VRQIQ KRRA RKATAVKIES
Sbjct: 287 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAEFVRQIQSKRRATRKATAVKIES 346

Query: 241 N 242
           N
Sbjct: 347 N 347

[Close]

BLAST of Carg25542 vs. NCBI nr
Match: XP_008447279.1 (PREDICTED: INO80 complex subunit D-like isoform X1 [Cucumis melo])

HSP 1 Score: 430.3 bits (1105), Expect = 1.1e-116
Identity = 211/241 (87.55%), Postives = 224/241 (92.95%), Query Frame = 0


Query: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60
           MA+SNSPGSFQ PP  P P++IDGA+ D ALAS    +RREVLERRSRR KQLCR+++EL
Sbjct: 1   MADSNSPGSFQPPPVTPFPILIDGADRDRALASSMVCSRREVLERRSRRAKQLCRIFKEL 60

Query: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120
           YW L+EELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGS TGSDEIRR
Sbjct: 61  YWFLLEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSSTGSDEIRR 120

Query: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180
           CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC
Sbjct: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180

Query: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 240
            GHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVL+AE VRQIQ KRRA ++ATA+KIES
Sbjct: 181 SGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLIAEYVRQIQSKRRATKRATAIKIES 240

Query: 241 N 242
           N
Sbjct: 241 N 241

[Close]

BLAST of Carg25542 vs. ExPASy Swiss-Prot
Match: Q54J07 (INO80 complex subunit D OS=Dictyostelium discoideum OX=44689 GN=DDB_G0288447 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.0e-08
Identity = 45/181 (24.86%), Postives = 72/181 (39.78%), Query Frame = 0


Query: 28  DLALASCEFFTRREVLERRSRRVKQLCRVYRELYWALMEELKRKYREYYWTYGKSPFKED 87
           D   AS    T  E+++RR   + +L  +Y++ Y    E L+   R Y  T      + D
Sbjct: 414 DFYFASSSVLTDEELIQRRKIYISKLILLYKKQYNRFKERLRIIRRHYISTSLSLNQQND 473

Query: 88  EKEAEGIGDYPEGIGENGKLGLGSVTGS------------------------DEIRRCDV 147
             + E   +    I  N      +   +                        +E   C  
Sbjct: 474 SNKMEIDNNNDNNINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKLNKRKEEGNLCLS 533

Query: 148 TGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYCPGH 185
             CK K M L+KYC++HIL DK Q+L+  CT+ + + +     C  P+L+  +P  C  H
Sbjct: 534 VNCKVKPMLLSKYCYSHILQDKDQKLFHECTYQLSANKK----CGYPILKVQIPTLCREH 590

[Close]

BLAST of Carg25542 vs. ExPASy TrEMBL
Match: A0A6J1JMD6 (KAT8 regulatory NSL complex subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111488191 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 5.8e-135
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60
           MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL
Sbjct: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60

Query: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120
           YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR
Sbjct: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120

Query: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180
           CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC
Sbjct: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180

Query: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 240
           PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES
Sbjct: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 240

Query: 241 N 242
           N
Sbjct: 241 N 241

[Close]

BLAST of Carg25542 vs. ExPASy TrEMBL
Match: A0A6J1GNX0 (KAT8 regulatory NSL complex subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111456134 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 5.8e-135
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60
           MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL
Sbjct: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60

Query: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120
           YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR
Sbjct: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120

Query: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180
           CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC
Sbjct: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180

Query: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 240
           PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES
Sbjct: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 240

Query: 241 N 242
           N
Sbjct: 241 N 241

[Close]

BLAST of Carg25542 vs. ExPASy TrEMBL
Match: A0A1S3BH19 (KAT8 regulatory NSL complex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103489752 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 5.5e-117
Identity = 211/241 (87.55%), Postives = 224/241 (92.95%), Query Frame = 0


Query: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60
           MA+SNSPGSFQ PP  P P++IDGA+ D ALAS    +RREVLERRSRR KQLCR+++EL
Sbjct: 1   MADSNSPGSFQPPPVTPFPILIDGADRDRALASSMVCSRREVLERRSRRAKQLCRIFKEL 60

Query: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120
           YW L+EELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGS TGSDEIRR
Sbjct: 61  YWFLLEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSSTGSDEIRR 120

Query: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180
           CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC
Sbjct: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180

Query: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 240
            GHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVL+AE VRQIQ KRRA ++ATA+KIES
Sbjct: 181 SGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLIAEYVRQIQSKRRATKRATAIKIES 240

Query: 241 N 242
           N
Sbjct: 241 N 241

[Close]

BLAST of Carg25542 vs. ExPASy TrEMBL
Match: A0A0A0K4I2 (KAT8 regulatory NSL complex subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_7G337070 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.1e-116
Identity = 210/241 (87.14%), Postives = 223/241 (92.53%), Query Frame = 0


Query: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60
           MAESNSPGSFQ PP  P P++IDGA+ D ALA+    +RREVLERRSRR KQLCR+++EL
Sbjct: 1   MAESNSPGSFQPPPVTPLPILIDGADRDRALATSMICSRREVLERRSRRAKQLCRIFKEL 60

Query: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120
           YW L+EELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGL S TGSDEIRR
Sbjct: 61  YWFLLEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLASATGSDEIRR 120

Query: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180
           CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC
Sbjct: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180

Query: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 240
            GHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVL+AE VRQIQ KRRA ++ATA+KIES
Sbjct: 181 SGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLIAEYVRQIQSKRRATKRATAIKIES 240

Query: 241 N 242
           N
Sbjct: 241 N 241

[Close]

BLAST of Carg25542 vs. ExPASy TrEMBL
Match: A0A6J1DAF9 (KAT8 regulatory NSL complex subunit 2 OS=Momordica charantia OX=3673 GN=LOC111018675 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.5e-114
Identity = 202/241 (83.82%), Postives = 220/241 (91.29%), Query Frame = 0


Query: 1   MAESNSPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYREL 60
           MAESNSPGSFQ PP PP PMVIDG +HD+ALAS +F TR+E+L RRSRRVKQL R+Y+  
Sbjct: 1   MAESNSPGSFQPPPVPPPPMVIDGTDHDVALASSKFITRKELLVRRSRRVKQLIRIYKAF 60

Query: 61  YWALMEELKRKYREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGLGSVTGSDEIRR 120
           YWALME+ KRK+REYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGK G+GS  GSD+IRR
Sbjct: 61  YWALMEDFKRKFREYYWTYGKSPFKEDEKEAEGIGDYPEGIGENGKFGIGSAAGSDDIRR 120

Query: 121 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 180
           CDVTGCK KAMA+TKYCHAHILSD KQRLYKGCTFVIKSM SGPLLCSKPVLRSTVPCYC
Sbjct: 121 CDVTGCKVKAMAMTKYCHAHILSDSKQRLYKGCTFVIKSMPSGPLLCSKPVLRSTVPCYC 180

Query: 181 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVKIES 240
           PGHLQKGEKCLARDLRKAGLN+SSTSKLRP+ HVL++E VRQIQ+KRRA RKATAVK E+
Sbjct: 181 PGHLQKGEKCLARDLRKAGLNISSTSKLRPELHVLLSEYVRQIQLKRRAMRKATAVKTET 240

Query: 241 N 242
           N
Sbjct: 241 N 241

[Close]

BLAST of Carg25542 vs. TAIR 10
Match: AT2G31600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 183.3 bits (464), Expect = 2.2e-46
Identity = 110/246 (44.72%), Postives = 143/246 (58.13%), Query Frame = 0


Query: 6   SPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYRELYWALM 65
           +P +   P     P+ +  +  D  LA     TR E+L+RRS  +KQL + YR+ YWALM
Sbjct: 49  NPSTSGLPSTSNSPITM--SQEDEILARSSHITRSELLKRRSHNLKQLAKCYRDNYWALM 108

Query: 66  EELKRKYREYYWTYGKSPFKEDEKEA--------EGI----GDYPEGIGENGKLGLGSVT 125
           E++K ++R+Y+W YG S FK++  ++        EG     GD  EG G+N     G  +
Sbjct: 109 EDVKAQHRDYWWKYGISQFKDENNQSNKRRRLGQEGDIGDGGDAVEGSGDNVTNNDGVKS 168

Query: 126 GSDEIRRCD--VTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPV 185
                  C   + GCKAKAMALTKYC  HIL D KQ+LY GCT VIK   +GPLLC KP 
Sbjct: 169 DQYANSNCGSCMYGCKAKAMALTKYCQLHILKDSKQKLYTGCTNVIKRAPAGPLLCGKPT 228

Query: 186 LRSTVPCYCPGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAAR 238
           L STVP  C  H QK +K +A+ L+ AG NVSSTSK  P  HV+VA  V  IQ KR+  +
Sbjct: 229 LASTVPALCNIHFQKAQKHVAKALKDAGHNVSSTSKPPPKLHVIVAAFVHHIQAKRKNPQ 288

[Close]

BLAST of Carg25542 vs. TAIR 10
Match: AT1G05860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31600.1); Has 101 Blast hits to 100 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 176.4 bits (446), Expect = 2.7e-44
Identity = 108/237 (45.57%), Postives = 137/237 (57.81%), Query Frame = 0


Query: 10  FQSP--PAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYRELYWALMEE 69
           F++P  P+      I  A  D  L +    TR E+L RRS  +KQL R YR+ YWALME+
Sbjct: 37  FRNPNNPSTSSNSPISMAVEDQILGNSNHLTRPELLRRRSHNLKQLSRCYRDHYWALMED 96

Query: 70  LKRKYREYYWTYGKSPFKED------EKEAEG-IGDYPEGIGENGKLGLGSVTGSDEIRR 129
           LK ++R Y W YG SPFK++       ++ EG  GD  EG G+N       V   + +  
Sbjct: 97  LKAQHRYYSWNYGVSPFKDENYHQNKRRKVEGQTGDEIEGSGDNDNNNNDGVKAGNCV-A 156

Query: 130 CDVTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYC 189
           C  +GCK+KAMALT YC  HIL DKKQ+LY  CT+V K  QS  + C KP L STVP  C
Sbjct: 157 CG-SGCKSKAMALTNYCQLHILMDKKQKLYTSCTYVNKRAQSKAITCPKPTLASTVPALC 216

Query: 190 PGHLQKGEKCLARDLRKAGLNVSSTSKLRPDFHVLVAECVRQIQVKRRAARKATAVK 238
             H QK +K +AR L+ AG NVSS S+  P  H +VA  V  IQ KR+  RK   +K
Sbjct: 217 NVHFQKAQKDVARALKDAGHNVSSASRPPPKLHDIVAAFVHHIQAKRKDPRKEGKLK 271

[Close]

BLAST of Carg25542 vs. TAIR 10
Match: AT3G53860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31600.1); Has 70 Blast hits to 70 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 174.9 bits (442), Expect = 8.0e-44
Identity = 101/211 (47.87%), Postives = 129/211 (61.14%), Query Frame = 0


Query: 28  DLALASCEFFTRREVLERRSRRVKQLCRVYRELYWALMEELKRKYREYYWTYGKSPFKED 87
           D  LAS    TR E+L RR+  +KQL + Y+  YWALME+LK ++R+Y+  YG S FK++
Sbjct: 65  DEILASSSHLTRPELLRRRADNLKQLAKCYKNHYWALMEDLKAQHRDYWCKYGVSQFKDE 124

Query: 88  EKEAEGIGDY-PEGIGENGKLGLGSVTGSDEIRRCDVTGCKAKAMALTKYCHAHILSDKK 147
           + ++       PEG G+ G  G      +     C + GCKAKAMALTKYC  HIL D K
Sbjct: 125 QNQSNKRRRLDPEGSGDKGNDGDQYANSNSGF--C-MYGCKAKAMALTKYCQLHILKDSK 184

Query: 148 QRLYKGCTFVIKSMQSGPLLCSKPVLRSTVPCYCPGHLQKGEKCLARDLRKAGLNVSSTS 207
           Q+LY GCT VI    +GPLLC KP L STVP  C  H QK +K +A+ L+ AG NVSSTS
Sbjct: 185 QKLYTGCTNVINRSPAGPLLCGKPTLASTVPVLCNVHYQKAQKNVAKALKDAGHNVSSTS 244

Query: 208 KLRPDFHVLVAECVRQIQVKRRAARKATAVK 238
           K  P  HV+VA  V  IQ +R+   K   +K
Sbjct: 245 KPPPKLHVIVAAFVHHIQAQRKNPHKEGKLK 272

[Close]

BLAST of Carg25542 vs. TAIR 10
Match: AT2G31600.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 112.5 bits (280), Expect = 4.9e-25
Identity = 70/167 (41.92%), Postives = 94/167 (56.29%), Query Frame = 0


Query: 6   SPGSFQSPPAPPHPMVIDGANHDLALASCEFFTRREVLERRSRRVKQLCRVYRELYWALM 65
           +P +   P     P+ +  +  D  LA     TR E+L+RRS  +KQL + YR+ YWALM
Sbjct: 49  NPSTSGLPSTSNSPITM--SQEDEILARSSHITRSELLKRRSHNLKQLAKCYRDNYWALM 108

Query: 66  EELKRKYREYYWTYGKSPFKEDEKEA--------EGI----GDYPEGIGENGKLGLGSVT 125
           E++K ++R+Y+W YG S FK++  ++        EG     GD  EG G+N     G  +
Sbjct: 109 EDVKAQHRDYWWKYGISQFKDENNQSNKRRRLGQEGDIGDGGDAVEGSGDNVTNNDGVKS 168

Query: 126 GSDEIRRCD--VTGCKAKAMALTKYCHAHILSDKKQRLYKGCTFVIK 159
                  C   + GCKAKAMALTKYC  HIL D KQ+LY GCT VIK
Sbjct: 169 DQYANSNCGSCMYGCKAKAMALTKYCQLHILKDSKQKLYTGCTNVIK 213

The following BLAST results are available for this feature:

BLAST of Carg25542 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953677.1	1.2e-134	100.00	INO80 complex subunit D-like [Cucurbita moschata] >XP_022991632.1 INO80 complex ...	[more]
KAG6575969.1	1.2e-134	100.00	INO80 complex subunit D, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038896100.1	2.1e-118	89.63	INO80 complex subunit D-like isoform X2 [Benincasa hispida] >XP_038896101.1 INO8...	[more]
XP_038896099.1	2.1e-118	89.63	uncharacterized protein LOC120084404 isoform X1 [Benincasa hispida]	[more]
XP_008447279.1	1.1e-116	87.55	PREDICTED: INO80 complex subunit D-like isoform X1 [Cucumis melo]	[more]

BLAST of Carg25542 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54J07	9.0e-08	24.86	INO80 complex subunit D OS=Dictyostelium discoideum OX=44689 GN=DDB_G0288447 PE=...	[more]

BLAST of Carg25542 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JMD6	5.8e-135	100.00	KAT8 regulatory NSL complex subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC11148819...	[more]
A0A6J1GNX0	5.8e-135	100.00	KAT8 regulatory NSL complex subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111456...	[more]
A0A1S3BH19	5.5e-117	87.55	KAT8 regulatory NSL complex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103489752 PE...	[more]
A0A0A0K4I2	2.1e-116	87.14	KAT8 regulatory NSL complex subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_7G337070...	[more]
A0A6J1DAF9	2.5e-114	83.82	KAT8 regulatory NSL complex subunit 2 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]

BLAST of Carg25542 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31600.1	2.2e-46	44.72	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G05860.1	2.7e-44	45.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G53860.1	8.0e-44	47.87	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G31600.2	4.9e-25	41.92	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025927	Potential DNA-binding domain	PFAM	PF13891	zf-C3Hc3H	coord: 122..183 e-value: 2.4E-16 score: 59.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR13453:SF7	DOMAIN PROTEIN, PUTATIVE-RELATED	coord: 9..239
IPR026316	KAT8 regulatory NSL complex subunit 2	PANTHER	PTHR13453	UNCHARACTERIZED	coord: 9..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25542-RA	Carg25542-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043984	histone H4-K16 acetylation
biological_process	GO:0043981	histone H4-K5 acetylation
biological_process	GO:0043982	histone H4-K8 acetylation
cellular_component	GO:0044545	NSL complex
cellular_component	GO:0000123	histone acetyltransferase complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046983	protein dimerization activity