Carg25508 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25508
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ammonium transporter 1 member 2
Location	Carg_Chr10: 5626103 .. 5630400 (+)
RNA-Seq Expression	Carg25508
Synteny	Carg25508

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAATCCAGTGGCTCTGAACACACCAGATTCTCTTACCTCCAATGGCTTCTCTTCACCTTCTTCAACCTCTCACTTTTCTCTCTTCCCATTCTGCCCCTCTCTCTTCCCAATGTTCCCATCCAATCCGCTTCAAACCCTCCTTTGCCCCAAAGCCCCTTTCACCAAAACCCCTCACTCTTTCCTTTGCTCTCGCCGAATCCGACTCCGCCAAGTCCTTAGAACCCGACCCCCAAGTTCTCCTTCAAGAACTGGCCGTAAGTATGGGCTTCATCTCAACTTTTCCCCCTCGATTTCGTTCAGTTCATATCCAATTTTCTGTTAGGGTTTTGATTGTTTGTGGCTGTTTTAATTTTATGTACAGGACAGTTTTGATCTCTCGCGAGATTACTTCGAAAAACTTCCCCGTGATCTTCGTCTTGATGTAAGAGGAAGTTTTAGATTCGATGTGTTTTGTTTTGTTTTTGTGTCATTCTGTAGCTCTGTTCTTAATGTTCTTCGGTTTTTGGGATTGAGATTAATATCCATTACGTTGTTTTGTATGTGAAGCTCAATGATGCTGCGTTCGATCTCTCTAATGGACCCGTTATTGATGAGGTACCGTTTCTGTTCTTATCGCTTGTATCTTTGCTTGTTTAGGCGTGTTCATATCCATTTTGGTTTCGTGATCGGATTGGAAAATGATGCTTATTAGTGATTTCTTTTACCTTGTGTTTGGAATGACTTCTGGAAGGTTAACAGTGCTTTTAGCTGCACTTTTCAAAAGATATGCCCTCTTTTCAAAGCACTTTTTTAAAAGTTATCCAAAATACACTCGAACGGAAAGTGTTACAATCCAAATTCACCGCTAGTAGATGTTGTCTTATTTGGGCTTTTCCTTCTGAGTTTCTCCTCAGGGTTTTAAAAACATTAGGGAGAAGTTTTCACACTCTTATGAAGAATGCTTCGTTCCCCTCTCTAACCGATGTGAGATCTCATAGAAAGGCCTGCGTACAAACTATCGTAGAAAATGTAACAAAAAAAAAATTGTCGACAATTCAACTGGTAAAGACAAATATATTACTATCGTTAGGAGCCTAAGTGTTTGAAACCCCACATCCATATTGTTGTTGAACCCAAAAAGAATGTTACAATGAAATTATCAAGAAGAAACAAGAAAATTAGAAAAAATTGTTAGGGAAAGATGCTTGAGGATGGTTGGGAGAGGAGTCCCACATTGGTTAATTAAGGGGTTGATCACGGGTTTATAAGTAAGGAATACATCTCCATTGGTATGAGGCCTTTTGAAAAAAACCCAAAGCAAAGCCATGAGAGTTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGGGTCGTGATTTCTAACATGGTATTAGAGTCATGTCCTTAACTTGACCATGTCAATAGAATTCTTAAATGTCGAGCAAAGAAGTTGCAACCTCGAAGGTGTAGTCAAAAGTGACTCAAGTGTTGTAAAAAGGGTATACTTTGTTTGAGGGCTCCAGAAAAGGAGTTGAGCCTCGATTAAGAGGAGGCTGTTCGAGGGTCCATAAGCCTCCGGGGAGGCTCTATGGTATACTTTGTTCGAGGGAAAGATTGTTGAGGATTGTTGGGAGAGGAGTCCCACGTCGGCTAATTAAGGGGTTGATCACGGGTTTATAAGTTACATTTCCATTGGTACAATGCCTTTTGGGAAAACCAAAAGCAAAGCCATGAGAGCTTATGCTCAAACTGGACAATATCATACCATTGTGGAGGTCGTGGTTCCTAAATGCACCCTCTCTGCTACGCATGCTTCTTTTCTTATTGTTTATTCTCAAGTCTTCTTTATTGTAAAACCGTCGTAATAGGATGGACGTATTGATTTTCAACTCTCAACTTGAAATAAATGTGGATTCTCTGCTACAAATTTGTGATGTACTGAGAATTTTAGAATCTCTGCTTCAGTGTGGTCAAGAAATGGGAGAAATATTGCTAAATCTCTCTCGAGCATGGGAAGTAGCTGACACCTCCACTTCACATACTTTAGTAAGCAAGCTCCCCTCGTTGGTGCAATCTTTGACCGAAAATTACAAGTCAGGCAAGAACAGGACTCAAGGAAATTGATACTCAAGTATTTTGTGAAGAAATAAATGTGACCTTGTTTGGTCTCTCTCTGTTTAGGACTTGGCAAGCGTTTGATATCTGCTGGAAGAAGGTTCCAATCAATGGGACAGTACGGTCAGGGCGAACTACAGAAGGTACATCGTAAACCCAAAATTACTTTTTCATGATCAAAGCTTTTGTGTTCATCAATCATATTGTATGAATTTTTCGAGTTAATGTGCGAAAAGATTTGAGATTGCTTAGAGATTCTGTTCACTATATACGGTTTCCTATGCTCTGCATAATTGGAAAGTCAATGACGTTATGTATTCCTTCTCGAGGTCGAGGAAATATCAACGTGTTAGGTTCTACCCTGTAATTTTGTTCATAGGAAAATGGAAAATCGAACTATAAATCTCGTCGGTACAAAAGTTTATCATTCAAGTTTTTCTAAGTTTCTTGGAAGTTTTCACAATTGTAGATTGCCAAAGCAATGAACACAACTGGAAAGCTTCTGTCTGCATCATCTGCTCCGAAAGTGGCCGAACAGCCGAAGGATGAAACCAGAATGTTTAAGGTAGGTTTGAACTTTATATTTGATGCAACGTATAAATTACAAATAAACCATTATTTTGCAGATTTGAACCATCTTGAACTTTATTCAAGTAATTGTAATAGCTCAAGCTCACCGCTAGCAGATATTGTTTTCTTTGAGCTTTCCCTTTCGGGCTTCCCCTCAAAGTTTTTAAAATGCGTCTATTAGGTAGAGGTTTCTACACTCTTATAAAGAATGTTTTGTTCTCCTTCTAACTGATGTGGGATCTCACAATCCAAGTAATTGTAAAAGTAATTGTAAAATGCGTCTATTAGGGAGAGGTTTCTACACTCTTATAAAGAATGTTTTGTTCTCCTTCCAATTGATGTGGGATCTCACAATCCATTTCCCTTTGGGGCCCAACGTTCTCGCTGTCACTCATTCCCTTCTCCAATCGATGTGCGGCCCCCAATCCACCCCCGACAGGGCTCAACATCCTTGCTAGCACACCGCCTCGTGTCCACCCCCTTTTAGGGCTCGCTGACATATTACCCGGTGTCTGGCTCTGATACCATTTGTAATGACCCAAGCCCACTGCTAGCAGATATTGTCCTCTTTGGGCTTTTCTTTCGAGCTTTCCTTCGAGGCTTTTTAAAACGCGTCTACTATGGAGAGGTTTTCACACCCTTATAAAGAACGTTTCATTCTCCTCCCCAACTGATGTGGGGATCTCACAGTAATATTGTTCCACTCTTCAGTTTGGAGAGCTTCAAGTTGAACTGACTGCCGATAAGGCGAACATCGGTGCAGCAATCGGTGTCGTATTTGGGTAATCACCACTCGTTTTAACTCAATTCTTCAATTTTTTCTTCATTTATCAGATGAAAAGCATATCCCTTTCATGTCTTGAATGTAAAATGCAGAGTAATTTCATGGCAACTGGGTCAGGGCGTTCAGAGCATTCCTGAGAGTTCTCTGCAGTATGCAAATGATAATGCTTTACTTCTAGCCAAGGTACTAGAACCTTATGATTATTTTGATTCTTAAGTTCAATGCTTTATGGTAATTTGATGATTTATATATCCTAGTCTTTGAGAGGCGCTCTACTGGCGGTTTCATACTCGTCGGCGGTTTTGTCTGCTTTTACTGCTGTGGGATTAGTCTTACTTGCTAGACAACTTAAATCAAAGGAAGAGTAAGCTTGTCTTCTTTGTTTGTGAACTCTGTAAATGTGTTGTTTTCTGTTCGAACTAAGCTCCTTGCTGGGGCTTTTACTGAAAATGATATGAATCTATGTACATGACAATAATCCTGCTCGGTTTTAGAATAAGAGGGGCTGATGTTCTCTTTGTTTTTTCTTTTTTCTTTTTAGTTTTGAATGAGAAACATGGGAATAGCCTTCTAGAGCCAAAAGCTGAACAAAACAACCCAAGGGACAAAGTGATAAGACATCGTTGAACACCGTCGAGTACGCCTCCTTCCAAATAAGCGACGGGATAGCTCTTGCAAGATTCATCGGAAACACTCTTTGAGTTTGCCTTTAGAAAACCACCCCGAAAAGATTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCCTCAATTGATGTGAGATCTCATAATCCACCCCTTCGGGGTCCAGCGTCTT

mRNA sequence

AAAAAAATCCAGTGGCTCTGAACACACCAGATTCTCTTACCTCCAATGGCTTCTCTTCACCTTCTTCAACCTCTCACTTTTCTCTCTTCCCATTCTGCCCCTCTCTCTTCCCAATGTTCCCATCCAATCCGCTTCAAACCCTCCTTTGCCCCAAAGCCCCTTTCACCAAAACCCCTCACTCTTTCCTTTGCTCTCGCCGAATCCGACTCCGCCAAGTCCTTAGAACCCGACCCCCAAGTTCTCCTTCAAGAACTGGCCGACAGTTTTGATCTCTCGCGAGATTACTTCGAAAAACTTCCCCGTGATCTTCGTCTTGATCTCAATGATGCTGCGTTCGATCTCTCTAATGGACCCGTTATTGATGAGTGTGGTCAAGAAATGGGAGAAATATTGCTAAATCTCTCTCGAGCATGGGAAGTAGCTGACACCTCCACTTCACATACTTTAGTAAGCAAGCTCCCCTCGTTGGTGCAATCTTTGACCGAAAATTACAAGTCAGGACTTGGCAAGCGTTTGATATCTGCTGGAAGAAGGTTCCAATCAATGGGACAGTACGGTCAGGGCGAACTACAGAAGATTGCCAAAGCAATGAACACAACTGGAAAGCTTCTGTCTGCATCATCTGCTCCGAAAGTGGCCGAACAGCCGAAGGATGAAACCAGAATGTTTAAGGTAGCATATCCCTTTCATGTCTTGAATGTAAAATGCAGAGTAATTTCATGGCAACTGGGTCAGGGCGTTCAGAGCATTCCTGAGAGTTCTCTGCAGTATGCAAATGATAATGCTTTACTTCTAGCCAAGTCTTTGAGAGGCGCTCTACTGGCGGTTTCATACTCGTCGGCGGTTTTGTCTGCTTTTACTGCTGTGGGATTAGTCTTACTTGCTAGACAACTTAAATCAAAGGAAGAGTAAGCTTGTCTTCTTTGTTTGTGAACTCTGTAAATGTGTTGTTTTCTGTTCGAACTAAGCTCCTTGCTGGGGCTTTTACTGAAAATGATATGAATCTATGTACATGACAATAATCCTGCTCGGTTTTAGAATAAGAGGGGCTGATGTTCTCTTTGTTTTTTCTTTTTTCTTTTTAGTTTTGAATGAGAAACATGGGAATAGCCTTCTAGAGCCAAAAGCTGAACAAAACAACCCAAGGGACAAAGTGATAAGACATCGTTGAACACCGTCGAGTACGCCTCCTTCCAAATAAGCGACGGGATAGCTCTTGCAAGATTCATCGGAAACACTCTTTGAGTTTGCCTTTAGAAAACCACCCCGAAAAGATTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCCTCAATTGATGTGAGATCTCATAATCCACCCCTTCGGGGTCCAGCGTCTT

Coding sequence (CDS)

ATGGCTTCTCTTCACCTTCTTCAACCTCTCACTTTTCTCTCTTCCCATTCTGCCCCTCTCTCTTCCCAATGTTCCCATCCAATCCGCTTCAAACCCTCCTTTGCCCCAAAGCCCCTTTCACCAAAACCCCTCACTCTTTCCTTTGCTCTCGCCGAATCCGACTCCGCCAAGTCCTTAGAACCCGACCCCCAAGTTCTCCTTCAAGAACTGGCCGACAGTTTTGATCTCTCGCGAGATTACTTCGAAAAACTTCCCCGTGATCTTCGTCTTGATCTCAATGATGCTGCGTTCGATCTCTCTAATGGACCCGTTATTGATGAGTGTGGTCAAGAAATGGGAGAAATATTGCTAAATCTCTCTCGAGCATGGGAAGTAGCTGACACCTCCACTTCACATACTTTAGTAAGCAAGCTCCCCTCGTTGGTGCAATCTTTGACCGAAAATTACAAGTCAGGACTTGGCAAGCGTTTGATATCTGCTGGAAGAAGGTTCCAATCAATGGGACAGTACGGTCAGGGCGAACTACAGAAGATTGCCAAAGCAATGAACACAACTGGAAAGCTTCTGTCTGCATCATCTGCTCCGAAAGTGGCCGAACAGCCGAAGGATGAAACCAGAATGTTTAAGGTAGCATATCCCTTTCATGTCTTGAATGTAAAATGCAGAGTAATTTCATGGCAACTGGGTCAGGGCGTTCAGAGCATTCCTGAGAGTTCTCTGCAGTATGCAAATGATAATGCTTTACTTCTAGCCAAGTCTTTGAGAGGCGCTCTACTGGCGGTTTCATACTCGTCGGCGGTTTTGTCTGCTTTTACTGCTGTGGGATTAGTCTTACTTGCTAGACAACTTAAATCAAAGGAAGAGTAA

Protein sequence

MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLEPDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLSRAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAKAMNTTGKLLSASSAPKVAEQPKDETRMFKVAYPFHVLNVKCRVISWQLGQGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE

Homology

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BLAST of Carg25508 vs. NCBI nr
Match: KAG7023903.1 (hypothetical protein SDJN02_14930 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 547.0 bits (1408), Expect = 9.9e-152
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60
           MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE
Sbjct: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60

Query: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120
           PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS
Sbjct: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120

Query: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180
           RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK
Sbjct: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180

Query: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKVAYPFHVLNVKCRVISWQLGQGVQSIPESSL 240
           AMNTTGKLLSASSAPKVAEQPKDETRMFKVAYPFHVLNVKCRVISWQLGQGVQSIPESSL
Sbjct: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKVAYPFHVLNVKCRVISWQLGQGVQSIPESSL 240

Query: 241 QYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 289
           QYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE
Sbjct: 241 QYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 288

[Close]

BLAST of Carg25508 vs. NCBI nr
Match: XP_022961081.1 (uncharacterized protein LOC111461699 isoform X1 [Cucurbita moschata])

HSP 1 Score: 507.7 bits (1306), Expect = 6.7e-140
Identity = 277/299 (92.64%), Postives = 278/299 (92.98%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60
           MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE
Sbjct: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60

Query: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120
           PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS
Sbjct: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120

Query: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180
           RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK
Sbjct: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180

Query: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVISWQLG 240
           AMNTTGKLLSASSAPKVAEQPKDETRMFK            A     + V   VISWQLG
Sbjct: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKFGELQVELTADKANIGAAIGVVFGVISWQLG 240

Query: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 289
           QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE
Sbjct: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 299

[Close]

BLAST of Carg25508 vs. NCBI nr
Match: XP_022961082.1 (uncharacterized protein LOC111461699 isoform X2 [Cucurbita moschata] >KAG6590300.1 hypothetical protein SDJN03_15723, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 506.5 bits (1303), Expect = 1.5e-139
Identity = 276/299 (92.31%), Postives = 278/299 (92.98%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60
           MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE
Sbjct: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60

Query: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120
           PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS
Sbjct: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120

Query: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180
           RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK
Sbjct: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180

Query: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVISWQLG 240
           AMNTTGKLLSASSAPKVAEQPKDETRMFK            A     + V   VISWQLG
Sbjct: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKFGELQVELTADKANIGAAIGVVFGVISWQLG 240

Query: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 289
           QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKE+
Sbjct: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKED 299

[Close]

BLAST of Carg25508 vs. NCBI nr
Match: XP_022988171.1 (uncharacterized protein LOC111485488 isoform X2 [Cucurbita maxima])

HSP 1 Score: 496.1 bits (1276), Expect = 2.0e-136
Identity = 273/299 (91.30%), Postives = 275/299 (91.97%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60
           MASLHLLQPLTFLSSHSAPL SQ SHPIRFKPSFA KPLSPKPLTLSFALAESDSAKSLE
Sbjct: 1   MASLHLLQPLTFLSSHSAPLFSQYSHPIRFKPSFAQKPLSPKPLTLSFALAESDSAKSLE 60

Query: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120
           PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS
Sbjct: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120

Query: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180
           RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK
Sbjct: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180

Query: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVISWQLG 240
           AMNTTGKLLSASSAPKVAEQPK+ETRMFK            A     + V   VISWQLG
Sbjct: 181 AMNTTGKLLSASSAPKVAEQPKNETRMFKFGELQVELTVDKANIGAAIGVVFGVISWQLG 240

Query: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 289
           QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE
Sbjct: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 299

[Close]

BLAST of Carg25508 vs. NCBI nr
Match: XP_023516677.1 (uncharacterized protein LOC111780489 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 492.7 bits (1267), Expect = 2.2e-135
Identity = 271/299 (90.64%), Postives = 273/299 (91.30%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60
           MASLHLLQPLTFLSSHSAPL SQ SHPIRFKPSFA KPLSPKPLTL FALAESDSAKSLE
Sbjct: 206 MASLHLLQPLTFLSSHSAPLFSQYSHPIRFKPSFAQKPLSPKPLTLPFALAESDSAKSLE 265

Query: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120
           PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS
Sbjct: 266 PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 325

Query: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180
           RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK
Sbjct: 326 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 385

Query: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVISWQLG 240
           AMNTTGKLLSASSAPKVAEQPK+ETRMFK            A     + V   VISWQLG
Sbjct: 386 AMNTTGKLLSASSAPKVAEQPKNETRMFKFGELQVELTADKANIGAAIGVVFGVISWQLG 445

Query: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 289
           QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSS VLSAFTAVGLVLLARQLKSKEE
Sbjct: 446 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSTVLSAFTAVGLVLLARQLKSKEE 504

[Close]

BLAST of Carg25508 vs. ExPASy TrEMBL
Match: A0A6J1H9C7 (uncharacterized protein LOC111461699 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461699 PE=4 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 3.2e-140
Identity = 277/299 (92.64%), Postives = 278/299 (92.98%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60
           MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE
Sbjct: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60

Query: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120
           PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS
Sbjct: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120

Query: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180
           RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK
Sbjct: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180

Query: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVISWQLG 240
           AMNTTGKLLSASSAPKVAEQPKDETRMFK            A     + V   VISWQLG
Sbjct: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKFGELQVELTADKANIGAAIGVVFGVISWQLG 240

Query: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 289
           QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE
Sbjct: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 299

[Close]

BLAST of Carg25508 vs. ExPASy TrEMBL
Match: A0A6J1H959 (uncharacterized protein LOC111461699 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461699 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 7.2e-140
Identity = 276/299 (92.31%), Postives = 278/299 (92.98%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60
           MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE
Sbjct: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60

Query: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120
           PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS
Sbjct: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120

Query: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180
           RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK
Sbjct: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180

Query: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVISWQLG 240
           AMNTTGKLLSASSAPKVAEQPKDETRMFK            A     + V   VISWQLG
Sbjct: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKFGELQVELTADKANIGAAIGVVFGVISWQLG 240

Query: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 289
           QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKE+
Sbjct: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKED 299

[Close]

BLAST of Carg25508 vs. ExPASy TrEMBL
Match: A0A6J1JGH5 (uncharacterized protein LOC111485488 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485488 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 9.7e-137
Identity = 273/299 (91.30%), Postives = 275/299 (91.97%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60
           MASLHLLQPLTFLSSHSAPL SQ SHPIRFKPSFA KPLSPKPLTLSFALAESDSAKSLE
Sbjct: 1   MASLHLLQPLTFLSSHSAPLFSQYSHPIRFKPSFAQKPLSPKPLTLSFALAESDSAKSLE 60

Query: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120
           PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS
Sbjct: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120

Query: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180
           RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK
Sbjct: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180

Query: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVISWQLG 240
           AMNTTGKLLSASSAPKVAEQPK+ETRMFK            A     + V   VISWQLG
Sbjct: 181 AMNTTGKLLSASSAPKVAEQPKNETRMFKFGELQVELTVDKANIGAAIGVVFGVISWQLG 240

Query: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 289
           QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE
Sbjct: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKSKEE 299

[Close]

BLAST of Carg25508 vs. ExPASy TrEMBL
Match: A0A6J1HAV0 (uncharacterized protein LOC111461699 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111461699 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 3.6e-123
Identity = 242/265 (91.32%), Postives = 243/265 (91.70%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60
           MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE
Sbjct: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60

Query: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120
           PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS
Sbjct: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120

Query: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180
           RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK
Sbjct: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180

Query: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVISWQLG 240
           AMNTTGKLLSASSAPKVAEQPKDETRMFK            A     + V   VISWQLG
Sbjct: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKFGELQVELTADKANIGAAIGVVFGVISWQLG 240

Query: 241 QGVQSIPESSLQYANDNALLLAKSL 255
           QGVQSIPESSLQYANDNALLLAK L
Sbjct: 241 QGVQSIPESSLQYANDNALLLAKDL 265

[Close]

BLAST of Carg25508 vs. ExPASy TrEMBL
Match: A0A6J1JIU7 (uncharacterized protein LOC111485488 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485488 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.8e-119
Identity = 240/279 (86.02%), Postives = 245/279 (87.81%), Query Frame = 0


Query: 1   MASLHLLQPLTFLSSHSAPLSSQCSHPIRFKPSFAPKPLSPKPLTLSFALAESDSAKSLE 60
           MASLHLLQPLTFLSSHSAPL SQ SHPIRFKPSFA KPLSPKPLTLSFALAESDSAKSLE
Sbjct: 1   MASLHLLQPLTFLSSHSAPLFSQYSHPIRFKPSFAQKPLSPKPLTLSFALAESDSAKSLE 60

Query: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120
           PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS
Sbjct: 61  PDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILLNLS 120

Query: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180
           RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK
Sbjct: 121 RAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQKIAK 180

Query: 181 AMNTTGKLLSASSAPKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVISWQLG 240
           AMNTTGKLLSASSAPKVAEQPK+ETRMFK            A     + V   VISWQLG
Sbjct: 181 AMNTTGKLLSASSAPKVAEQPKNETRMFKFGELQVELTVDKANIGAAIGVVFGVISWQLG 240

Query: 241 QGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVL 269
           QGVQSIPESSLQYANDNALLLAK L      + Y S ++
Sbjct: 241 QGVQSIPESSLQYANDNALLLAKDLEQQFDWLIYPSGII 279

[Close]

BLAST of Carg25508 vs. TAIR 10
Match: AT5G37360.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 296.2 bits (757), Expect = 2.8e-80
Identity = 176/303 (58.09%), Postives = 212/303 (69.97%), Query Frame = 0


Query: 2   ASLHLLQPLTFLSSHSAPLSSQCSH-PIRFKPSFAPKPLSPKPLTLSFALAESDSAKSL- 61
           +S+ LLQPL  LSS +   S    H     KP+ + +    K LTL FAL ESDS K L 
Sbjct: 7   SSISLLQPLHSLSSSTLFFSQPSFHFSSSLKPNKSKRHNLSKSLTLRFALTESDSTKPLE 66

Query: 62  --EPDPQVLLQELADSFDLSRDYFEKLPRDLRLDLNDAAFDLSNGPVIDECGQEMGEILL 121
             EP  + LL +L+  FDL  DYF++LP DLRLDLNDAAFDLSNGPVIDECGQE+GE LL
Sbjct: 67  IEEPSSKSLLLQLSKCFDLPSDYFQQLPNDLRLDLNDAAFDLSNGPVIDECGQELGETLL 126

Query: 122 NLSRAWEVADTSTSHTLVSKLPSLVQSLTENYKSGLGKRLISAGRRFQSMGQYGQGELQK 181
           NLSRAWE ADTSTS +LV KLP L   LT+  +S  GKRLISAG+RFQ MGQY +GELQK
Sbjct: 127 NLSRAWEQADTSTSRSLVEKLPELEILLTDGARSAFGKRLISAGKRFQGMGQYAKGELQK 186

Query: 182 IAKAMNTTGKLLSA-SSAPKVAEQPKDETRMFKV-----------AYPFHVLNVKCRVIS 241
           IAKAM TTG +LSA +S+  V+ + K  TRMFK            AY    +     ++S
Sbjct: 187 IAKAMITTGGVLSAKTSSVSVSNESKSGTRMFKFGELQVAVTPEKAYTGAAIAFIYGILS 246

Query: 242 WQLGQGVQSIPESSLQYANDNALLLAKSLRGALLAVSYSSAVLSAFTAVGLVLLARQLKS 289
           WQ+ QG+QSIPE+SLQYANDNALL+ KSLRG+LLA+ Y+S VLS FT  GL+LLA+QL S
Sbjct: 247 WQISQGIQSIPENSLQYANDNALLIGKSLRGSLLALFYASTVLSGFTTAGLILLAKQLSS 306

The following BLAST results are available for this feature:

BLAST of Carg25508 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023903.1	9.9e-152	100.00	hypothetical protein SDJN02_14930 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022961081.1	6.7e-140	92.64	uncharacterized protein LOC111461699 isoform X1 [Cucurbita moschata]	[more]
XP_022961082.1	1.5e-139	92.31	uncharacterized protein LOC111461699 isoform X2 [Cucurbita moschata] >KAG6590300...	[more]
XP_022988171.1	2.0e-136	91.30	uncharacterized protein LOC111485488 isoform X2 [Cucurbita maxima]	[more]
XP_023516677.1	2.2e-135	90.64	uncharacterized protein LOC111780489 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg25508 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg25508 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9C7	3.2e-140	92.64	uncharacterized protein LOC111461699 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1H959	7.2e-140	92.31	uncharacterized protein LOC111461699 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JGH5	9.7e-137	91.30	uncharacterized protein LOC111485488 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HAV0	3.6e-123	91.32	uncharacterized protein LOC111461699 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JIU7	1.8e-119	86.02	uncharacterized protein LOC111485488 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Carg25508 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37360.1	2.8e-80	58.09	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36802	OS02G0815400 PROTEIN	coord: 1..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25508-RA	Carg25508-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane