Carg25478 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25478
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ribosomal protein S5 family protein
Location	Carg_Chr20: 5261262 .. 5265305 (+)
RNA-Seq Expression	Carg25478
Synteny	Carg25478

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAACAAATCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTGCACCAAAACCCCATCAAAACCCCACTTCACATTTCCCGGAAAATCTCCCCTCTCCAACGCTTCCCGTTTGAGGAAACACCGAAGACTCCGGCGACGCGGTGTTACTCAACTGCTTCAGCCAGAGTAGTGCAAGATCTTCTCGCTGAAGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTCTTGATACCAAGGATATTGACGATGAAGATAGGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAATTTAAAGGACACCGGGAACTTGAACGCCTATGAAGAAGCTACTGATTCTGATAGTGATGAAGACGATGAAAGATTTAGTTCTGAATCCGTCAAAAAGAGGTTTGATGAATTTGAGAGGAAATTCAAAAGACACGAGGAATTGCTCAAGCACTTCACTGAGACTGGTATGACCATTTATTTTGGAGCATATCAACATTTCCTACTTGTTCTTGTTTTTAGTGTATGGAAGGATTTTGGGAATGCATATTGATTCAAATTTTGTATACTCCAAATGTAGCTAGTGGCATCCTCAAGTTTTTGTTTCGTTGTTTGATACTTATTGCAATAGACTAACATGTGGGTTACACTTTTTATAACGTTCTTCATATGGAATGAGGCATGAACATATGTATTGAAAACGTTGCAGAATTCAGCAGCTATTAATTGATACCATTATTCGATCTTAACATCTTAACCAAAAGAAAATTCATATAGCCATTGTTTTTGTTTTTGCAACTTTTTGGACTTGTGTTAAAATCTGTCGTCTCCAACTGTTTTTTTACAGACAACATCGATGACGCCTTCAAATGGATGAGTAAGATCGACAAGTTTGAGCAAAAACACTTCCGGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTGGCGGATGGCAAGGAGAAGTTCATTCTTCAGCAAAAGTTAAATAGGGCTATGAGACTAGTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCAAACTATGGAGTCATTCAACATGAACAAGTAGGTCCGTCGGTTGATCTCATGGAGCAATCAGGATTTGAAAAAGAGAAGCAAATCATACAAGGGGTTGATGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAACTTGAAGAGAAGCTGGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTTGAAGAAGAAATCCGAGATCTCGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAACGAAGGCCTCTTTATCGAAAAGTATGTTAATCCATCATCCTTTCTATGCCTTTACTTTATTGTCTGTCTTCTTTTGGCAGTTGAAATTTCGTTTTTCTACACCGGGATTTGAAGAACACGCTGTGTTGTAAGCTAAGCTGTTCCCCTTGTAGACGGAGGAGATATAGAAAGTGTGGTCTAAGTTGAGGCTCTCTCTCCCTCACTTTTGCTTGTTACAAATTGATTGCAGGGTTTCGATGTGAAATTAATTGATGTGAACAGAACCTGTAAAGTTACGAAGGTACGCACCCACCCTTCTAATTATCCTATCCAAATAATTATGCACTTGATGATTGTAAACTTTGGATGATATAGGGTGGGCAAGTTGTCAAATACAGTGCTCTCTTGGCTTGTGGGAACTATCATGGCATTGTTGGTTATGCAAAAGCCAAAGGACCTGCAGTACCAATTGCTCTACAAAAGGCATGTTGCTTGTGCTATTCAGTAGACTCCGTTTACTTGTTTAGTTTTATTGAAATTTGAGAATTTGAGAAAATGGCTGAAGTTTGAGTTATAGAATGATAGTGAATTAATTTTTAAGGTGTACTACAATTGTGTTTTGATTGAAGAGATTGAATTTGTGGTGATCCGAAGTGAGAGATACAAAATTTATGGTAGTATTTTGTTCTTTGAATCATTATTATATATAGGAAACCGAAGCCGTTCGTTGTTATGTTGAAATGGGTTACAAAAGTACACAAAACATAGAACGGAGGAGGAAAGGAGTTTGTCGAGGGCCTTTGAGAGGCGAGAGTGTTGCGCTGAAAAGTGCATTTATTTGAAGTCTTAATTAGGAGGGAGGACACTAGTTTGAGACAAAAGTCGAAAGTCAAGCGGGCTAAAATGGTGGATGAAAACTCCTCTTTTTTCCCATAGTATGGCGAGGGGTAGGAGAAATGAACTTGATTGAGTTCGTGGAGAACGAAGATGGAGTGGTCGTGATGCCCACCGCCTAGTGTGTTCTTAGTCCTTTCTTGGAAGGTTTAGACTAGTGTCCCATCTGTTGAGGATTATTGGGAGTGAGTCCCACATTGGTTAATTTAGTGGAAGATGAGTCCCACATTGGTTAATTTAGTGGAAGATCATGGGTTTATAAGTGTGGAATACTATCTCCATTGGAATGAGGCCTTTTGGGAAAGCCCAAAGCAAAGTCATGAGAGTTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGATTCCTAACACCATCTTAGAAAGGGAAAGTGAAACAAAAGAGTTGGAAGCTCCTTTTACTTTGGGAGGAAATTTGCGTGGTGGTATTTGACTTCGATAGGAATAAATCGCTTGGTGGGCCCACTGACCCATAACCTGAAGAGCGTTAGCCCGAATCGACTTGCATTAACCAAACTACCTGAGCCCGAATCCACTCTTGCTACCAACTTGCTCAACCGATTCCCCTATGACTCCTTACGCTTCCATGAGTGTGTTTCACTGTCTGGGCAAGATTTTGGCACCTCTTTAGAGGTTCAAACACATCTTCTAGGATCCATGTGGGGTTCCTATTGATTTGTTCCCATGAAAGCATCTTTGGAAACAGTAATGTCTGTTTTGTCAACATTTGCTTCAATCCTCATCGTTGATCCTGTTGGAGAGCCAGAGACCAACACCCTTGAGTCCCCACTGAATTAGAGCCCCCCTTCCCACCTATCTGCCTATAAATGATGTTAGCTTAAGATCCATCAGCCACCTTTTTGTTCTATGAGAGATAGCAAAAAGAAAAAATGTTCTATATCAAATTGCCTTGGTGTGGCACAATGAGCATTTTGCCTTGTAATTTTTCAGTTTACGTTTTAAATGTGTATTGATGCTCTTAAGCAGGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGCCACGAGGAGCACACAATTGCACATGCAGTACAGACGGAATACAAGAAAACAAAGGTATTCGACCATTTCTAGTTTTCTTCTCTGCATCGAAAGTTCTTATCTCGGATCGAGGAGTCCCAGCCCTCCTGCACCTGGAAAACATCAGGGGCTAAATACCTGTGGTGGACAAGGCGGATGAGTCGTATATACTGACTGCTGGACAACAACGACAACCGTCTCTTGTCTAGTTTTGGATGATCCATATCCAGTTGATCGATTTCTGTCATTTGATAGAAAGTTATGGTTCCTTTCTGTTCTTAAATCTCCTTTTTGTTGTTGTGTTTGTTAAGGTATATCTTTGGCCAGCATCAACTACCACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTCTGAATCTGGCTGGTTTTAAAAACGTCAAATCTAAGGTAATTTCTTCATCTCCTTTGTTGTGGAGATCAATATAAAATGTATTCTCTCTTCCCTCCTCCACTGCCTCTAACTCGAGTTCAAATAACAGGTCGTTGGCTCAAGGAACCCCCACAACACTCTGAAGGCCCTCTTCAAAGCTCTGAATGCAGTTAGTAGCTATGAAATTAACATTGTTAATATATCTTCATACAACATTCTGCTAACAATTATATTATACGTCATGTTTTCCAGATCGAGACTCCAAAAGATATTCAAGAAAAGTTCGGACGGACTGTTGTCGAGAAGTACTTGCTATGA

mRNA sequence

ATGGTGAACAAATCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTGCACCAAAACCCCATCAAAACCCCACTTCACATTTCCCGGAAAATCTCCCCTCTCCAACGCTTCCCGTTTGAGGAAACACCGAAGACTCCGGCGACGCGGTGTTACTCAACTGCTTCAGCCAGAGTAGTGCAAGATCTTCTCGCTGAAGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTCTTGATACCAAGGATATTGACGATGAAGATAGGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAATTTAAAGGACACCGGGAACTTGAACGCCTATGAAGAAGCTACTGATTCTGATAGTGATGAAGACGATGAAAGATTTAGTTCTGAATCCGTCAAAAAGAGGTTTGATGAATTTGAGAGGAAATTCAAAAGACACGAGGAATTGCTCAAGCACTTCACTGAGACTGACAACATCGATGACGCCTTCAAATGGATGAGTAAGATCGACAAGTTTGAGCAAAAACACTTCCGGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTGGCGGATGGCAAGGAGAAGTTCATTCTTCAGCAAAAGTTAAATAGGGCTATGAGACTAGTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCAAACTATGGAGTCATTCAACATGAACAAGTAGGTCCGTCGGTTGATCTCATGGAGCAATCAGGATTTGAAAAAGAGAAGCAAATCATACAAGGGGTTGATGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAACTTGAAGAGAAGCTGGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTTGAAGAAGAAATCCGAGATCTCGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAACGAAGGCCTCTTTATCGAAAAGGTTTCGATGTGAAATTAATTGATGTGAACAGAACCTGTAAAGTTACGAAGGGTGGGCAAGTTGTCAAATACAGTGCTCTCTTGGCTTGTGGGAACTATCATGGCATTGTTGGTTATGCAAAAGCCAAAGGACCTGCAGTACCAATTGCTCTACAAAAGGCATGTTGCTTGTGCTATTCAGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGCCACGAGGAGCACACAATTGCACATGCAGTACAGACGGAATACAAGAAAACAAAGGTATATCTTTGGCCAGCATCAACTACCACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTCTGAATCTGGCTGGTTTTAAAAACGTCAAATCTAAGGTCGTTGGCTCAAGGAACCCCCACAACACTCTGAAGGCCCTCTTCAAAGCTCTGAATGCAATCGAGACTCCAAAAGATATTCAAGAAAAGTTCGGACGGACTGTTGTCGAGAAGTACTTGCTATGA

Coding sequence (CDS)

ATGGTGAACAAATCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTGCACCAAAACCCCATCAAAACCCCACTTCACATTTCCCGGAAAATCTCCCCTCTCCAACGCTTCCCGTTTGAGGAAACACCGAAGACTCCGGCGACGCGGTGTTACTCAACTGCTTCAGCCAGAGTAGTGCAAGATCTTCTCGCTGAAGTGGAGAAGGAGAAGCAGAGAGAAAGGGAGCAGAGGAGAAGGGCTGGTCTTGATACCAAGGATATTGACGATGAAGATAGGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAATTTAAAGGACACCGGGAACTTGAACGCCTATGAAGAAGCTACTGATTCTGATAGTGATGAAGACGATGAAAGATTTAGTTCTGAATCCGTCAAAAAGAGGTTTGATGAATTTGAGAGGAAATTCAAAAGACACGAGGAATTGCTCAAGCACTTCACTGAGACTGACAACATCGATGACGCCTTCAAATGGATGAGTAAGATCGACAAGTTTGAGCAAAAACACTTCCGGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTGGCGGATGGCAAGGAGAAGTTCATTCTTCAGCAAAAGTTAAATAGGGCTATGAGACTAGTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCAAACTATGGAGTCATTCAACATGAACAAGTAGGTCCGTCGGTTGATCTCATGGAGCAATCAGGATTTGAAAAAGAGAAGCAAATCATACAAGGGGTTGATGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTTAATGCTATAGATAAGAAACTTGAAGAGAAGCTGGCAGAGCTGGATCATACCTTTGGAAAGAAAGGAAAGGTTCTTGAAGAAGAAATCCGAGATCTCGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAACGAAGGCCTCTTTATCGAAAAGGTTTCGATGTGAAATTAATTGATGTGAACAGAACCTGTAAAGTTACGAAGGGTGGGCAAGTTGTCAAATACAGTGCTCTCTTGGCTTGTGGGAACTATCATGGCATTGTTGGTTATGCAAAAGCCAAAGGACCTGCAGTACCAATTGCTCTACAAAAGGCATGTTGCTTGTGCTATTCAGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGCCACGAGGAGCACACAATTGCACATGCAGTACAGACGGAATACAAGAAAACAAAGGTATATCTTTGGCCAGCATCAACTACCACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTCTGAATCTGGCTGGTTTTAAAAACGTCAAATCTAAGGTCGTTGGCTCAAGGAACCCCCACAACACTCTGAAGGCCCTCTTCAAAGCTCTGAATGCAATCGAGACTCCAAAAGATATTCAAGAAAAGTTCGGACGGACTGTTGTCGAGAAGTACTTGCTATGA

Protein sequence

MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLNAYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL

Homology

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BLAST of Carg25478 vs. NCBI nr
Match: KAG7011014.1 (rpsE, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 990.7 bits (2560), Expect = 4.6e-285
Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180
           AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID
Sbjct: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240
           KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDDEEEFDDMKERDDILLEKLNAIDKKLE 300
           VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDDEEEFDDMKERDDILLEKLNAIDKKLE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDDEEEFDDMKERDDILLEKLNAIDKKLE 300

Query: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360
           EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG
Sbjct: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360

Query: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEH 420
           GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEH
Sbjct: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEH 420

Query: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480
           TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA
Sbjct: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480

Query: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 509
           LFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 508

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BLAST of Carg25478 vs. NCBI nr
Match: KAG6571211.1 (hypothetical protein SDJN03_30126, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 954.9 bits (2467), Expect = 2.8e-274
Identity = 497/508 (97.83%), Postives = 498/508 (98.03%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQNPIK+PLHISRKISPLQRFPFEETPKTPATRCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKSPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKE LKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180
           AYEE TDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID
Sbjct: 121 AYEEPTDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240
           KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDDEEEFDDMKERDDILLEKLNAIDKKLE 300
           VIQHEQVGPSVDLMEQSGFEKEKQIIQGV DDDDEEEFDDMKERDDILLEKLNAIDKKLE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGV-DDDDEEEFDDMKERDDILLEKLNAIDKKLE 300

Query: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360
           EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG
Sbjct: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360

Query: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEH 420
           GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQK       AYEKCFQNLHYVERHEEH
Sbjct: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERHEEH 420

Query: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480
           TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA
Sbjct: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480

Query: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 509
           LFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 500

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BLAST of Carg25478 vs. NCBI nr
Match: XP_023512942.1 (uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo] >XP_023512943.1 uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 954.1 bits (2465), Expect = 4.8e-274
Identity = 497/508 (97.83%), Postives = 498/508 (98.03%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKE LKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180
           AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID
Sbjct: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240
           KFEQKHF LRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG
Sbjct: 181 KFEQKHFWLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDDEEEFDDMKERDDILLEKLNAIDKKLE 300
           VIQHEQVGPSVDLMEQSGFEKEKQIIQGV DDDDEEEFDDMKERDDILLEKLNAIDKKLE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGV-DDDDEEEFDDMKERDDILLEKLNAIDKKLE 300

Query: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360
           EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG
Sbjct: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360

Query: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEH 420
           GQVVKY+ALLACGNYHGIVGYAKAKGPAVPIALQK       AYEKCFQNLHYVERHEEH
Sbjct: 361 GQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERHEEH 420

Query: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480
           TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA
Sbjct: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480

Query: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 509
           LFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg25478 vs. NCBI nr
Match: XP_022943762.1 (DEAD-box ATP-dependent RNA helicase 42 [Cucurbita moschata] >XP_022943763.1 DEAD-box ATP-dependent RNA helicase 42 [Cucurbita moschata])

HSP 1 Score: 954.1 bits (2465), Expect = 4.8e-274
Identity = 496/508 (97.64%), Postives = 499/508 (98.23%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISR+ISPLQRFPFEETPKTPATRCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKE LKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180
           AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID
Sbjct: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240
           KFEQKHFRLRPEYRVIGELMNRLK+ADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDDEEEFDDMKERDDILLEKLNAIDKKLE 300
           VIQHEQVGPSVDLMEQSGFEKEKQIIQGV DDDDEEEFDDMKERDDILLEKLNAIDKKLE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGV-DDDDEEEFDDMKERDDILLEKLNAIDKKLE 300

Query: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360
           EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG
Sbjct: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360

Query: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEH 420
           GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQK       AYEKCFQNLHYVERHEEH
Sbjct: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERHEEH 420

Query: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480
           TIAHAVQTEYKKTKVYLWPAST+TGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA
Sbjct: 421 TIAHAVQTEYKKTKVYLWPASTSTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480

Query: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 509
           LFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg25478 vs. NCBI nr
Match: XP_023533655.1 (uncharacterized protein LOC111795451 [Cucurbita pepo subsp. pepo] >XP_023533656.1 uncharacterized protein LOC111795451 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 922.2 bits (2382), Expect = 2.0e-264
Identity = 477/508 (93.90%), Postives = 491/508 (96.65%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRL+LNQVV QNPIKTP+HISRKIS   RFPFEE PKT A RCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKE LKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180
           AYEE +DSDSDE+DERFSSES+KKRFDEFERKFKRHEELLK+FTETDNI+DAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEEDERFSSESLKKRFDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240
           KFEQKHFRLRPEYRVIGELMNRLKVA+GKEKFILQQKLNRAMRLVEWKEAYDPN+PANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNSPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDDEEEFDDMKERDDILLEKLNAIDKKLE 300
           VIQHEQVGPSVDLMEQSGFEKEKQ+IQGV DDDDEEEFDDMKERDDILLEKLNAIDKKLE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQMIQGV-DDDDEEEFDDMKERDDILLEKLNAIDKKLE 300

Query: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360
           EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG
Sbjct: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360

Query: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEH 420
           GQV+KY+ALLACGNYHGIVGYAKAKGPAVPIALQK       AYEKCFQNLHYVERHEEH
Sbjct: 361 GQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERHEEH 420

Query: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480
           TIAHA+QTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKN+KSKVVGSRNPHNTLKA
Sbjct: 421 TIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKA 480

Query: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 509
           LFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg25478 vs. ExPASy Swiss-Prot
Match: Q1IFU9 (30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) OX=384676 GN=rpsE PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.4e-21
Identity = 62/163 (38.04%), Postives = 95/163 (58.28%), Query Frame = 0


Query: 342 KGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCY 401
           +G+  KL+ VNR  K  KGG++  ++AL   G+  G VG+ + K   VP A+QK      
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQK------ 69

Query: 402 SAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGF 461
            A E   +N+  V+  +  T+ +A +  +  +KVY+ PAS  TG+ AG  ++ VL +AG 
Sbjct: 70  -AMEAARRNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGV 129

Query: 462 KNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 505
           +NV +K  GS NP N + A FK L A+++P+ I  K G+TV E
Sbjct: 130 QNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRGKTVEE 164

[Close]

BLAST of Carg25478 vs. ExPASy Swiss-Prot
Match: Q4K550 (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=rpsE PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.8e-21
Identity = 61/163 (37.42%), Postives = 97/163 (59.51%), Query Frame = 0


Query: 342 KGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCY 401
           +G+  KL+ VNR  K  KGG++  ++AL   G+  G VG+ + K   VP A+QK      
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQK------ 69

Query: 402 SAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGF 461
            A E   +N+  V+ +   T+ +A+++ +  +KVY+ PAS  TG+ AG  ++ VL +AG 
Sbjct: 70  -AMEAARRNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGV 129

Query: 462 KNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 505
           +NV +K  GS NP N + A FK L A+++P+ I  K G++V E
Sbjct: 130 QNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRGKSVQE 164

[Close]

BLAST of Carg25478 vs. ExPASy Swiss-Prot
Match: C3K2V9 (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=rpsE PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.8e-21
Identity = 62/163 (38.04%), Postives = 96/163 (58.90%), Query Frame = 0


Query: 342 KGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCY 401
           +G+  KL+ VNR  K  KGG++  ++AL   G+  G VG+ + K   VP A+QK      
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQK------ 69

Query: 402 SAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGF 461
            A E   +N+  V+ +   T+ +A+++ +  +KVY+ PAS  TG+ AG  ++ VL +AG 
Sbjct: 70  -AMEAARRNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGV 129

Query: 462 KNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 505
           +NV +K  GS NP N + A FK L A+++P+ I  K G TV E
Sbjct: 130 QNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRGLTVKE 164

[Close]

BLAST of Carg25478 vs. ExPASy Swiss-Prot
Match: Q5X842 (30S ribosomal protein S5 OS=Legionella pneumophila (strain Paris) OX=297246 GN=rpsE PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.9e-21
Identity = 61/162 (37.65%), Postives = 92/162 (56.79%), Query Frame = 0


Query: 343 GFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYS 402
           G+  KL+ V RT KV KGG+V  ++ L+  G+  G VG+ + K   VPIA+QK       
Sbjct: 11  GYQEKLVSVTRTAKVVKGGRVFGFAVLVVVGDGKGKVGFGRGKAREVPIAIQK------- 70

Query: 403 AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFK 462
           A ++  +N+ Y+      TI H +   Y  +KV++ PAS  TG+ AG  ++ VL + G +
Sbjct: 71  AMDQAKKNMVYIPL-SGTTIFHEITWNYGASKVFMKPASEGTGIIAGGAMRAVLEVLGVQ 130

Query: 463 NVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 505
           N+ +K +GS NP N ++A   AL  I TP  +  K G+TV E
Sbjct: 131 NILAKSIGSTNPSNIVRATIGALTHIGTPDYVAAKRGKTVEE 164

[Close]

BLAST of Carg25478 vs. ExPASy Swiss-Prot
Match: A5IHP7 (30S ribosomal protein S5 OS=Legionella pneumophila (strain Corby) OX=400673 GN=rpsE PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.9e-21
Identity = 61/162 (37.65%), Postives = 92/162 (56.79%), Query Frame = 0


Query: 343 GFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYS 402
           G+  KL+ V RT KV KGG+V  ++ L+  G+  G VG+ + K   VPIA+QK       
Sbjct: 11  GYQEKLVSVTRTAKVVKGGRVFGFAVLVVVGDGKGKVGFGRGKAREVPIAIQK------- 70

Query: 403 AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFK 462
           A ++  +N+ Y+      TI H +   Y  +KV++ PAS  TG+ AG  ++ VL + G +
Sbjct: 71  AMDQAKKNMVYIPL-SGTTIFHEITWNYGASKVFMKPASEGTGIIAGGAMRAVLEVLGVQ 130

Query: 463 NVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE 505
           N+ +K +GS NP N ++A   AL  I TP  +  K G+TV E
Sbjct: 131 NILAKSIGSTNPSNIVRATIGALTHIGTPDYVAAKRGKTVEE 164

[Close]

BLAST of Carg25478 vs. ExPASy TrEMBL
Match: A0A6J1FXC7 (DEAD-box ATP-dependent RNA helicase 42 OS=Cucurbita moschata OX=3662 GN=LOC111448419 PE=3 SV=1)

HSP 1 Score: 954.1 bits (2465), Expect = 2.3e-274
Identity = 496/508 (97.64%), Postives = 499/508 (98.23%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISR+ISPLQRFPFEETPKTPATRCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKE LKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180
           AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID
Sbjct: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240
           KFEQKHFRLRPEYRVIGELMNRLK+ADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDDEEEFDDMKERDDILLEKLNAIDKKLE 300
           VIQHEQVGPSVDLMEQSGFEKEKQIIQGV DDDDEEEFDDMKERDDILLEKLNAIDKKLE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGV-DDDDEEEFDDMKERDDILLEKLNAIDKKLE 300

Query: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360
           EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG
Sbjct: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360

Query: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEH 420
           GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQK       AYEKCFQNLHYVERHEEH
Sbjct: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERHEEH 420

Query: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480
           TIAHAVQTEYKKTKVYLWPAST+TGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA
Sbjct: 421 TIAHAVQTEYKKTKVYLWPASTSTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480

Query: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 509
           LFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg25478 vs. ExPASy TrEMBL
Match: A0A6J1G7C4 (uncharacterized protein LOC111451428 OS=Cucurbita moschata OX=3662 GN=LOC111451428 PE=3 SV=1)

HSP 1 Score: 912.1 bits (2356), Expect = 1.0e-261
Identity = 474/508 (93.31%), Postives = 488/508 (96.06%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAFSWSRL+LNQVV +NPI+TP+HISRKIS   RFPFEE PKT A RCYSTASAR
Sbjct: 1   MVNKSQAFSWSRLILNQVVQRNPIQTPIHISRKISSFARFPFEEIPKTLAARCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKE LKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180
           AYEE +DSDSDE+DERFSSES+KKR DEFERKFKRHEELLK+FTETDNI+DAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240
           KFEQKHF LRPEYRVIGELMNRLKVA+GKEKFILQQKLNRAMRLVEWKEAYDPN PANYG
Sbjct: 181 KFEQKHFWLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNCPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDDEEEFDDMKERDDILLEKLNAIDKKLE 300
           VIQHEQVGPSVDLMEQSGFEKEKQIIQGV DDDDEEEFDDMKERDDILLEKLNAIDKKLE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGV-DDDDEEEFDDMKERDDILLEKLNAIDKKLE 300

Query: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360
           EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG
Sbjct: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360

Query: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEH 420
           GQV+KY+ALLACGNYHGIVGYAKAKGPAVPIALQK       AYEKCFQNLHYVERHEEH
Sbjct: 361 GQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERHEEH 420

Query: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480
           TIAHA+QTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKN+KSKVVGSRNPHNTLKA
Sbjct: 421 TIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKA 480

Query: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 509
           LFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg25478 vs. ExPASy TrEMBL
Match: A0A6J1KZ96 (uncharacterized protein LOC111499608 OS=Cucurbita maxima OX=3661 GN=LOC111499608 PE=3 SV=1)

HSP 1 Score: 909.4 bits (2349), Expect = 6.5e-261
Identity = 471/508 (92.72%), Postives = 487/508 (95.87%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60
           MVNKSQAF+WSRL+LNQVV QNPIKTP+HISRKIS   RFPFEE PKT A RCYSTASAR
Sbjct: 1   MVNKSQAFAWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPKTSAARCYSTASAR 60

Query: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLN 120
           VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDED EDYMGVGPLIEKLEKE LKDTGNLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDGEDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180
           AYEE +DSDSDE+DERFSSES+KKRFDEF+RKFKRHEELLK+FTETDNI+DAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEEDERFSSESLKKRFDEFKRKFKRHEELLKNFTETDNIEDAFKWMSKID 180

Query: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240
           KFEQKHFRLRPEYRVIGELMNRLKVA+GKEKFILQQKLNRA RLVEWK+AYDPN PANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKDAYDPNCPANYG 240

Query: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDDEEEFDDMKERDDILLEKLNAIDKKLE 300
           VIQHEQVGPSVDLMEQSGFE+EKQIIQGV DDDDEEEFDDMKERDDILLEKLNAIDKKLE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEEEKQIIQGV-DDDDEEEFDDMKERDDILLEKLNAIDKKLE 300

Query: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360
           EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG
Sbjct: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360

Query: 361 GQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEH 420
           GQV+KY+ALLACGNYHGIVGYAKAKGPAVPIALQK       AYEKCFQNLHYVERHEEH
Sbjct: 361 GQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERHEEH 420

Query: 421 TIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKA 480
           TIAHA+QTEYKKTKVYLWPA TTTGMKAGKTVQTVLNLAGFKN+KSKVVGSRNPHNTLKA
Sbjct: 421 TIAHAIQTEYKKTKVYLWPAPTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRNPHNTLKA 480

Query: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 509
           LFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 LFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Carg25478 vs. ExPASy TrEMBL
Match: A0A6J1D5I3 (uncharacterized protein LOC111017222 OS=Momordica charantia OX=3673 GN=LOC111017222 PE=3 SV=1)

HSP 1 Score: 878.2 bits (2268), Expect = 1.6e-251
Identity = 466/511 (91.19%), Postives = 482/511 (94.32%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPK---TPATRCYSTA 60
           MVNKSQAFSWSRL+L+QVV QNP KTPLHI+R IS L+RFPFEE PK   + A R YSTA
Sbjct: 1   MVNKSQAFSWSRLILSQVV-QNPTKTPLHITRNISNLRRFPFEEIPKFSFSGAAR-YSTA 60

Query: 61  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKENLKDTG 120
           SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDED+EDYMGVGPLIEKLEKE LKDTG
Sbjct: 61  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTG 120

Query: 121 NLNAYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMS 180
           +LNAYEE TDSDSDEDDERFS ESVK+RFD+FERKFKRHEELLKHFTE++N+DDAFKWM+
Sbjct: 121 DLNAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMN 180

Query: 181 KIDKFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPA 240
           KIDKFEQKHF LRPEYRVIGELMNRLKVA+GKEKFILQQKLNRAMRLVEWKEAYDPNNPA
Sbjct: 181 KIDKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPA 240

Query: 241 NYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDDEEEFDDMKERDDILLEKLNAIDK 300
           NYGVIQ EQVG SVDL+EQSGF KEKQIIQG  DDDDEEEFDDMKERDDILLEKLNAIDK
Sbjct: 241 NYGVIQQEQVGSSVDLLEQSGFAKEKQIIQGA-DDDDEEEFDDMKERDDILLEKLNAIDK 300

Query: 301 KLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKV 360
           KLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKV
Sbjct: 301 KLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKV 360

Query: 361 TKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERH 420
           TKGGQVVKY+ALLACGNYHGIVGYAKAKGPAVPIALQK       AYEKCFQNLHYVERH
Sbjct: 361 TKGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK-------AYEKCFQNLHYVERH 420

Query: 421 EEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNT 480
           EEHTIAHAVQT YKKTKVYLWPAST TGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNT
Sbjct: 421 EEHTIAHAVQTAYKKTKVYLWPASTCTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNT 480

Query: 481 LKALFKALNAIETPKDIQEKFGRTVVEKYLL 509
           LKALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 481 LKALFKALNAIETPKDIQEKFGRTVVEKYLL 501

[Close]

BLAST of Carg25478 vs. ExPASy TrEMBL
Match: A0A6J1J864 (uncharacterized protein LOC111484333 OS=Cucurbita maxima OX=3661 GN=LOC111484333 PE=3 SV=1)

HSP 1 Score: 868.6 bits (2243), Expect = 1.3e-248
Identity = 459/486 (94.44%), Postives = 465/486 (95.68%), Query Frame = 0


Query: 25  KTPLHISRKISPLQRFPFEETPKTPATRCYSTASARVVQDLLAEVEKEKQREREQRRRAG 84
           KTPL ISRKISPLQRFPFEETPKTPAT CYST SARVVQD LAEVEKEKQREREQRRRAG
Sbjct: 19  KTPLQISRKISPLQRFPFEETPKTPATLCYSTTSARVVQDFLAEVEKEKQREREQRRRAG 78

Query: 85  LDTKDIDDEDREDYMGVGPLIEKLEKENLKDTGNLNAYEEATDSDSDEDDERFSSESVKK 144
           LDTKDIDDEDREDYMGVGPLIEKLEKE LKDTGNLNAYEE TDSDSDEDDERFSSESVKK
Sbjct: 79  LDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLNAYEEPTDSDSDEDDERFSSESVKK 138

Query: 145 RFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRLK 204
           RFDEFERKFKRHEEL K+FTETDNIDDAFKWMSKIDKFEQKHFRLRPEY+VIGELMNRLK
Sbjct: 139 RFDEFERKFKRHEELFKNFTETDNIDDAFKWMSKIDKFEQKHFRLRPEYQVIGELMNRLK 198

Query: 205 VADGKEKF-ILQQKLNRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEK 264
           VADGK KF ILQQKLNRA+RLVEWKEAYDPNNPANYGVIQH++VGPSVDLME SGFEKEK
Sbjct: 199 VADGKGKFIILQQKLNRAIRLVEWKEAYDPNNPANYGVIQHKRVGPSVDLMELSGFEKEK 258

Query: 265 QIIQGVDDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRD 324
           QIIQGV DDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRD
Sbjct: 259 QIIQGV-DDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRD 318

Query: 325 LAEERNSLTEKKRRPLYRK-GFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYA 384
           LAEERNSLTEKKRRPLYRK  FDVKLIDVNRTCKVTKGGQVVKY+ALLACGNYHGIVGYA
Sbjct: 319 LAEERNSLTEKKRRPLYRKVWFDVKLIDVNRTCKVTKGGQVVKYTALLACGNYHGIVGYA 378

Query: 385 KAKGPAVPIALQKACCLCYSAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPAST 444
           KAKGPAVPIALQK       AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPAST
Sbjct: 379 KAKGPAVPIALQK-------AYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPAST 438

Query: 445 TTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTV 504
           TTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHN LKALFKALNAIETPKDIQEKFGRTV
Sbjct: 439 TTGMKAGKTVQTVLNLAGFKNVKSKVVGSRNPHNNLKALFKALNAIETPKDIQEKFGRTV 496

Query: 505 VEKYLL 509
           VEKYLL
Sbjct: 499 VEKYLL 496

[Close]

BLAST of Carg25478 vs. TAIR 10
Match: AT1G64880.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 619.4 bits (1596), Expect = 2.6e-177
Identity = 337/535 (62.99%), Postives = 415/535 (77.57%), Query Frame = 0


Query: 4   KSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQR-----------------FPFEETP 63
           +++A SW RLLL     +NP  +    SR+IS L                   FP  +TP
Sbjct: 4   RTRASSWPRLLL----RRNPRSS---FSRQISTLDSSTSTFPRRISGYYSSSFFPVNQTP 63

Query: 64  --KTPATRCYSTASA------RVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDY 123
              +   R +S+++       RVV++L+AEVEKEKQRERE+R+R GLD KDID ED EDY
Sbjct: 64  WISSQRYRFFSSSTMSPSEADRVVRELIAEVEKEKQREREERQRQGLDYKDIDAEDEEDY 123

Query: 124 MGVGPLIEKLEKENLKDTGNLNAYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEE 183
           +G+ P IEKL+K+NLKD G LN  EE++DSDS+ D+     E  +K+ D F +KF+RH+E
Sbjct: 124 LGIEPFIEKLKKQNLKDDGELNRREESSDSDSEYDEIDLDEE--RKKEDIFNKKFQRHKE 183

Query: 184 LLKHFTETDNIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKL 243
           LL+  T+++ +D+AF+WM+K+DKFE+KHF+LRPEYRVIGELMNRLKVA+GKEKF+LQQKL
Sbjct: 184 LLQTLTKSETLDEAFRWMNKLDKFEEKHFKLRPEYRVIGELMNRLKVAEGKEKFVLQQKL 243

Query: 244 NRAMRLVEWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEKQII-----QGVDDDD 303
           NRAMRLVEWKEA+DPNNPANYGVI+ + V       +  G E+E++++        DDDD
Sbjct: 244 NRAMRLVEWKEAFDPNNPANYGVIERDNV-------QGGGEEREERLVADGPKDDNDDDD 303

Query: 304 DEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTE 363
           DEEEFDDMKERDDILLEKLNAIDKKLE KL+ELDHTFGKKGK LEEEIR+LAE+RN+LTE
Sbjct: 304 DEEEFDDMKERDDILLEKLNAIDKKLEIKLSELDHTFGKKGKRLEEEIRELAEDRNALTE 363

Query: 364 KKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIAL 423
           KKR+PLYRKG+DV +IDV + CKVTKGG+V +Y+AL+ CGNY GI+GYAKAK      A+
Sbjct: 364 KKRQPLYRKGYDVHVIDVKKVCKVTKGGRVERYTALMVCGNYEGIIGYAKAKAETGQSAM 423

Query: 424 QKACCLCYSAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQ 483
           QK       AYEKCFQNLHYVERHEEHTIAHA+QT YKKTK+YLWPA TTTGMKAG+ V+
Sbjct: 424 QK-------AYEKCFQNLHYVERHEEHTIAHAIQTSYKKTKLYLWPAPTTTGMKAGRVVK 483

Query: 484 TVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 509
           T+L LAGFKN+KSKV+GSRN +NT+KA+ KALNA+ETPKD+QEKFGRTVVEKYLL
Sbjct: 484 TILLLAGFKNIKSKVIGSRNSYNTVKAVLKALNAVETPKDVQEKFGRTVVEKYLL 515

[Close]

BLAST of Carg25478 vs. TAIR 10
Match: AT2G33800.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 83.2 bits (204), Expect = 6.7e-16
Identity = 53/166 (31.93%), Postives = 84/166 (50.60%), Query Frame = 0


Query: 334 KKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIAL 393
           K ++   R GF+ +++ V R  KV KGG+ +K+ A++  G+  G VG   AK   V  A+
Sbjct: 137 KPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAV 196

Query: 394 QKACCLCYSAYEKCFQNLHYVERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQ 453
           QK+            +N+  V   +  T  H  + +Y   KV L PAS  TG+ AG  V+
Sbjct: 197 QKSAI-------DARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVR 256

Query: 454 TVLNLAGFKNVKSKVVGSRNPHNTLKALFKALNAIETPKDIQEKFG 500
            VL +AG +N   K +GS N  N  +A   A+  +   +D+ ++ G
Sbjct: 257 IVLEMAGVENALGKQLGSNNALNNARATLAAVQQMRQFRDVAQERG 295

The following BLAST results are available for this feature:

BLAST of Carg25478 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011014.1	4.6e-285	100.00	rpsE, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6571211.1	2.8e-274	97.83	hypothetical protein SDJN03_30126, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023512942.1	4.8e-274	97.83	uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo] >XP_023512943....	[more]
XP_022943762.1	4.8e-274	97.64	DEAD-box ATP-dependent RNA helicase 42 [Cucurbita moschata] >XP_022943763.1 DEAD...	[more]
XP_023533655.1	2.0e-264	93.90	uncharacterized protein LOC111795451 [Cucurbita pepo subsp. pepo] >XP_023533656....	[more]

BLAST of Carg25478 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1IFU9	1.4e-21	38.04	30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) OX=384676 GN=rp...	[more]
Q4K550	1.8e-21	37.42	30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL ...	[more]
C3K2V9	1.8e-21	38.04	30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=...	[more]
Q5X842	3.9e-21	37.65	30S ribosomal protein S5 OS=Legionella pneumophila (strain Paris) OX=297246 GN=r...	[more]
A5IHP7	3.9e-21	37.65	30S ribosomal protein S5 OS=Legionella pneumophila (strain Corby) OX=400673 GN=r...	[more]

BLAST of Carg25478 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FXC7	2.3e-274	97.64	DEAD-box ATP-dependent RNA helicase 42 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1G7C4	1.0e-261	93.31	uncharacterized protein LOC111451428 OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]
A0A6J1KZ96	6.5e-261	92.72	uncharacterized protein LOC111499608 OS=Cucurbita maxima OX=3661 GN=LOC111499608...	[more]
A0A6J1D5I3	1.6e-251	91.19	uncharacterized protein LOC111017222 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1J864	1.3e-248	94.44	uncharacterized protein LOC111484333 OS=Cucurbita maxima OX=3661 GN=LOC111484333...	[more]

BLAST of Carg25478 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64880.1	2.6e-177	62.99	Ribosomal protein S5 family protein	[more]
AT2G33800.1	6.7e-16	31.93	Ribosomal protein S5 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 59..86
None	No IPR available	COILS	Coil	Coil	coord: 105..125
None	No IPR available	COILS	Coil	Coil	coord: 314..337
None	No IPR available	COILS	Coil	Coil	coord: 289..309
None	No IPR available	COILS	Coil	Coil	coord: 139..159
None	No IPR available	GENE3D	3.30.160.20		coord: 294..403 e-value: 9.7E-19 score: 69.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..137
None	No IPR available	PANTHER	PTHR13718:SF61	28S RIBOSOMAL PROTEIN S5, MITOCHONDRIAL	coord: 63..508
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 339..416
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 417..505 e-value: 7.4E-28 score: 98.0
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 429..496 e-value: 4.5E-22 score: 77.3
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 344..398 e-value: 2.9E-15 score: 56.0
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 344..396 score: 14.138125
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 63..508
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 420..498

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25478-RA	Carg25478-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome