Carg25434 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25434
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	nuclear cap-binding protein subunit 1-like
Location	Carg_Chr11: 4289286 .. 4301201 (+)
RNA-Seq Expression	Carg25434
Synteny	Carg25434

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAGCATCTTCGCTTTTACAGTCCCGTGTGTTGATTCGAACCCACTTCCCCATCTCCTCATTTTCCCTCTACGACCTTTTTTTTTTCTTCTTCTGGGTAGTAATGAGCAGCTGGAAGAGTCTTCTTCTTCGAATTGGCGACAAGTCCCCGGAATATGGCACCTCCTCCGACTTCAAAGACCATATTGTTCGTCTCTCTCTCTCTATATTCCTCCATTTGTACGCCGGTATTCGACTTCTGGCTGTTGATTTTCATCTGGGTTTTGCAGGAAACTTGCTTTGGTGCGATTCGGCGGGAGCTGGATCACTATGGAGATGAAGTTTTGCCTGTAATTCTTTGCTTCTGCACACTCTTTGCTCTTTAATTTATCTGGGTCTTCATGATCAAATTTGCAGTCTTTGTATTGGATGAAATTGTACTGGTTGAATTACTATATCTGCAGCACGTGTGCTCTGTAATTTATCTGGGTCTTGATGAAATTTGCAGTCCTTGTATTGGGTGAAATTATACTGGTTGAATCACTATATCAGCAGCACGTGTGAACTGAGTTATTTTTTTTTTTGCTGGCAACTTATTTAGTTGTATCCCTTCGTGGCACATTGAGTCGTGTCTAATTACTCTATGCTTGTGGTATTTACGCTGTTTTCTTTTTTCTCATCTGCAGTTCCTTCTACAATGCGTTGAACAATTGCCTCATAAGACTCCTTTGTACGGGACATTGGTAAAGTACATTACATTCTTCATACCTACTGTGGATATCTTTTCTTAAAACTTCTGTCTTGCAATGATGTGCTTATGTTGCTATCTCGTGTGATTTAGCTTCAACTTCTTAGTTATGTCTCACATGTATAGTACTGTACAGCATTATAAATCTTATTTATCAAGTCCCTAACGGACGATCGGCTTGTCTTTGAGCATGATAAAGAGCTTCGTGCCGACTAGTTGCTAATAAACTTTTTAGCCTCATATGAGAATGGAAAACTAGAGCATTTTCTGCATCTAATTTCTGGTTGACCATGTTCCTAGAAAAGGATACTTTCGAGAAAGGACAAGCACGACTGAATTAGCTATACATACAAATCTATTCTAAACGTTTCCCATGAAAAGACAAAGCTTTAGATTCAAAGTTATGAAATGCAGTGGCCTTCCTTTTGCTATTTCCTTTTCTGTTCTTCTTCATGTATCGTTTATAACTCTAGAGCTACGTGGTCGGGCATTTCCTCTTTTTCCTGTAGTGTATTATTTGATTCAACAAAATAGTATGTTTCCTTCAGGAAAAGACAAACCTTCTTTCTTTTTCCCTAGTTTGGTTTGTTGCTTTGGCTCCCTCTTCCCTTTGTATATTCTTTCACAAGTGGAATGGTTTTTCATACCCTTGTTTCCTTTATACTCCCTTTGATTCCGTTATACTCTCACTCCAACTGGTAAACACGGTCTCTCTTCCTTTCTTTCTCTCTTTTTTGCTTTAATGTTTACTTATAATTTTCAATGATGGTTATATATCTATCTTGTTGTGCATACAGATTGGGTTAATAAACTTGGAAAATGAAGACTTCGTGAAGAAAATTGTGGACCAAACTCACAAAAGTTTTCAGGTTAGCGATTTTGCGGATCACATGGTTTAGATGTTTTCATTTCTTGTGCCGTTCGAACTTTCTGCCGAGTTGCTTCCTTTCTGAACTTCTCCTATGACCCCAACCACAAATCCTCACAAATTCAATCCAATTGCCTCAAGGGGATAAGTGTCTTGATGCCTTCAAAGTGAGAGGCGAGAAAGACACATTGTCATTGTCTTAGTGAAGTGAATTAAGGCACTTCCATACACAAAAATAAAAAAGAAACGAGTAAATTATATATTTAGTTCTTGAACTTTTAAAGTCGTGTAGATTTTCATTTTTGTAGCTAATAGGTTGGAATTTTCAATTTTGTGCCTAATAAGTTCTTGGCCTATTCAATATTTTTTTGGGTAGTAAACAACTTTATTCATTAAATAAAATGCTGCACGATGAGGAGATCACCAATAAAAAAAAATCCTACGAATCACCTTGACAACCAAATATAGTAGCGTCAGATAGTTGAAGTGTTTGCAAGCTGGCGTGAACACTCATAGATATTAAAAAGTGTATGGTGCGATCAAGGACAAGTATCTTCGTTCTGCGATTACTCTTCTGTTAGTGCGCCAATTGTAAAAGATGGTGTACTTATAGCCTGGCCTTGATTGTTAGAAATTGGAAGGTTTTACTTTGTGATAGTTCTTTTGTTTGGGAAGGGGTTCTCCCCCTACCCCTTTCCCTCAACTTGTTTTCCTTTTGCTGATATGAATACAAATCTTGCTGTTTCATATAAAAGAAAAAAAGTTTTCGGGATGTTCGACTCCCATCCTTAGTATTCGAATTTCAATTATTTCATCAGATATACTTCGTTTATCTTACTCGTAGTTCTTTTTCAGGATGCCTTAAACACTGGAAATTGCCACGGGATTCGAATTTTGTTACGCTTTCTAACTACCCTGGTATGCTTGATTTTGCTATTAACAATACATTGTTTTTGACCGAGATATTATCATTGTTTAAATTTGAAAACTTAACGTATTATAGTTTTTTTCTGTCATCTTAAAAAAATATTCTGACCTTTTAAATGGGTTCATTGTTTTTTGTCTTATGTAGATGAGCAGTAAAGTCCTGCTGTCCACTTCTCTAGTTGTTGTTTTTGAAACATTATTATCTTCAGCTGCCACAACAGTGGATGAAGAGAAGGGAAACCCTGCATGGCAGGCACGCGCTGACTTTTACATATCTTGCATTCTCTCCTGTTTTCCCTGGGGAGGAGCTGAACTGGTTGAGGTATTGTTGTTTTGTCTCTGAATTTGGTTCTTCCTGTGATTGCTCTAAAAGAATTATTTAAATACTCTACTATTTTTAGAATGTTACAACAACACGTGGGATGAGGATTTCAAACCTACGAACTTGTTTTTAATTGCTGAGCTATACTCATGTTGGCCAAAGAGCCTCTTTCATTGAAAACTCATCTTCGTGCGCAGCAAGTTCCTGAAGAGCTCGAGAGAGTAATGGTTGGAGTAGAAGCTTACTTAAGCATTCGAAGGCATACCGTGGACACTGGTTTATCCTTTTTTGAGGATGCTGGTGAAGTTGAGAAAACTCTTAATGAGAAGGTATAATTTCACTAGTTGCGATAATTCTTTATCATAATTCTAAACTTTTCTACTTGATTGGGAATCCGTTTCGGGTTGACTGTTTTTTCAATATATATACGGCAATGCCGTTAGTTATAAATGTCATGGTGTCGAATCTGTTATGTCACTAGAAAAACCTATGTTATTTCAGTTGGAGATTCTGCCTTATGATTGGAACTGAACACAGTTAGTATGATAATGATTTTGTTTTTAGAAGTTAAGCTTGTTTACTAGGGGTTTCTTTGTTTTCTTATCTATATTTTATCGACTGGCTCAGGATTAACACTGCTCAACTAAATTCAACCAACAAGGCGAACTAACTATAAAGTAAAACCTGTGGCCGTAAGAAATCGTAACAAATTACTGTAAGCAACAATGAAAGAATTCTAATCATAAACCAGGCCATGTAGAAAAAGCTTCCACCTTGTCTTCCCTCCTCCCCATGCTCTCACCAGAGCTCAAAATAGATAAATTTGGTTTTATCACCTTGTTATGAAATTTGCAACATAAGTTACATTAATCCTTTTGTTTTGGTGGTCGTTTCAGGATTTTTTAGAAGATTTATGGGGACGCATACAAGCGTTATCTAGTGATGGATGGAAAGTGGATAGTGGTGATTTTCTTAAACTTTAAGCCTCAATTTGGTTATTTACTCTGGTCCTTTTATGTCCCTATATCATTATATTTTACAATGAATAAAGGGAAATTGATCCATGTATAGAACTGCTGAAAGCATATGCCATGAGGGATTGGTATAGTAGTAACTTTGAGAACCCCATTTACATCTAGAATCCATACATTTTCGTTCATATTGCTGTGAGATGCATTGGTATCTCTGAGAGTTTCTCTAAGTGGGTCTCGATCACTGAGTTGCAAGAATTTAAATTGACCCTTGATAATGTATGATAGTTCAGTATCTTCTTTGATGGAACCTTGCTATCTAGTTTCTCTGTTTGCTTGGTTTTTTTGAATTTTCTTAGCAGTAGGGATTCATCAACAATGTTATTGTTCATTAGAAACTTTTCATTGATGTAACGAAAAGAGACTAAAACTCAAAGATACAAACTCCAAAAGGAGTGAAAGAGAGTAAAAGGAAACAACAGCAAGACCGAACTAAGAAACATATAGATCAAGGACTAAATGAAAGAACCAAAACATAAACATAACCAGAGCTTTAGGATTCTCTGGTTGTGCTACACATTTCTAGATACCTATGGTATCGACGATGCAGGGAAGGGAAACTGGGTCTTGATCTCCAAATGCTTTGGAGATTCCAAGGAATGAAGTCGTACTGGAGAGATCGCCAAGGGGCACAATGGTGTATGACAAAGTATTTACAGAGAAAATATACCTATGAGTCTTAGAGGTGGGTCAGTGATGTAGAGTTTTATATTTTGTATTTTCAGTAATTGTTATATCTTCTCATGTGATAGTTCCAAGGCCCCACCTTCTATTTGAAGCTCAGCTAGTTGCTGGTAAGTCTCATGAATTTGGAAGCATCAGCTGTCCGGAGCAACCTGATTCACCTTCAACACCTTCTGGCATTACTTATGGTAAACAGAAGTATGATGCAGAGTTTAGAATCCTCTAGTTGTGCTACACATTTCTAGATACCTATGGTATCGACGATACAGGGAAGGGAAACGGGGTCTTGTGAAGTCGTACTGGAGAGATTACTAAGACTTTGTGTAAGGAGTTATATTTAGTGTGACTTAATTTGTTTTACTGGCCTCAATAAAAAATCACCTCCAGTGAGCAAGAGGGTTGATAAGCTATAGTTACAAAAAGGAGTCCAATTGATAGCACACCTTATTATATTTTATTTCCAAACAAAACAACAATGAACATCAACATTTTCAGCTTGCACTATTAGATTTGTTTGCAACATGAATGAGATAGTTTATTTTGGCTGTCTCCCTTGAGATATTAGCTTCCTAATGATCCTTTATACTCAAAATTTTTAAACAATTCCCATCTCTCATAAATTTCAAAGGCATCACTAGTAGTAGTACTACAAGGTTTAGCCCATAATCTCTTTTAAGCAAGTCAGAACACATTTTTACAAAATTCCTCTGAAAAGGCACTAATAAAAAAGGTGGTATCCCAGTCGAGGTGTGTCTGTATTTGACACTAATACATGGCAGAAAATAGAGTGCCTGTACTATGTCCTAGGTAATTGGGCATCTATAACTATGAAAACGAAGTGTAGATTAATATACGATCAAATACATGAACGATTACCATGTTCTTCAGTTAATTTTGTGACATTTTATGATATATAGATCATACAAATGGAGATTTGTGAAAGAAATTCCCGTATCATTTTTAAATCTCGACTTTTGGGGAAATGTTGTGACTGAATTTCTACTCTTTTATCTGATCGTGCAAATGGAACTTTGGAAAAGAAATCCCCGTATCATTTATAAATCTCGACTTTTGGGGCAAAGTTGTGAATGAGTTTCTATAGTCTTCTCTTTTAGCCTGGTTATAATATTCTTTTTATTGGTTTATGATTACATGATGTATTACCAAATTCAAACGTGGTCCTCAATTGAAACGTACGTGTTTCTTGGACCTTTGTTGATGCAGGATCTGCAACCTATTGATCGTTTTGTCGTGGAGGAGTATCTTTTAGATGTGCTTCTTTTCTTCAATGGCTGGTTCGTAATTTCTCCATATCTATAATTTAACAATGAATACGAGACCATTAAGCTTCCCTCATCTGTTAATCATTTAGGTTTTAGGAGAGATCGTTTCAAGAACGTTGCATTTGACAACATGATTAGGTGTGTCTTGTGAAGGGAAGATCATTATGCACTTAAAATATTCTGTATTAGCATGTTTTTGTTCTAAAAGATGGTATCTACGGAAACAAATTGAATGAAAGTAAGGGAAAGTCCGAAGGAATTATAGAAGGCTCTGTTTGATTGTTCATGTTTTAGCTTGAAAGAAACAAACAATAGGTGCTTTTAAGATAGATTAGTCTATCTATGATTCTTGTTATTGTCATAAATCCTCCTAACTACGGTTTTCGTGGACTGTATGGCTTGTTTTTCATAGGATTTATTGCCTCATTCTGATTGTATATTCTCCTCTACACTGTATATTCAAGTGAACAGGTCCTCCAAGTTTAACTTAAGTGACCAAATGTGAAGGTCTTTTGTACCTTTTAACCAATATTCTGTTGTAAATTCGTATACTACCATTCAATTAACTATATAATGCGAATAAATATGTAGAGTTTCTTTTAAATGTTTTATGGAATGACGTTTTTATACGTTTCAATAAGTTGAAATTCAACATGTAACAGTGGTTTATTTGTCTTGTTTCATGCAAAGCTAGTCGAAAGGAATGTGCGTCTTTCATGGTTGGTCTCCCTGTACCTTTTAGATATGAGTATCTTATGGCAGAGACAATCTTCTCGCAGGTGTGCAGCTATCTTTCTGGTTAATTATTGAAGCATTTGTTGTCTTCCTCTTTCCCAATTTTATGATTGAATGAAATGTACAAAAGGCTAGAGCTTAAAAACCATGAAACAAAAGTAGTAACATAAAGATCTCTTATTGGCATCCAATCCTTGCGGGAGACTCTCCGACATAATGCTATTGTTTCTCTCGAGCCGAACTCTCTCCACAAAATGCTATTGGCGTTCAATCTAGCTCTATAAATATCCTATTGTTTCTCTCGAGTCGAACTCTCCGCAAAGTTATAAAGAAATAAGCATCGCATGAAGCTCTTCCCTTCTCCCGAAAAGGTGAACTTAGGTGTATCTCCTCAATCATAGTGTAATAGTCATAATTTCAAGCCCCAACATAAGCCAAATGATTCTTACCACCAAAACCAAAGAGATTGAGCAAACTAACAGCCCCACAAGAAATGAAGGAGTCGATCCTAAGAACCCTCATGGATATGCAAACCCCTAGATCACGAATGCTAGAACTTCTAAATCAAGTTGATTTCATCCAAAATGATTGTAACTCTTGAGAATTCGATCTAACAACCTTATTGAAGAATAAGACTGAATAAGACTCTTAGATCTAAAGTATCTAAGAACCCCAAAATGATAAGGAATCACCCCAAGGGAAAGTAAGATTCAGATTATCTATTGAAAACCTTAGCCAATTGGTTCTAAGAACCCTCATGGATATGCAAACCCCTAGATCAGAAATGCTAAACTCCCAAATCAAGTTGATTTCATCCCAAATGATTGTAACTCTTGGGGATTCGATCTAACAACCTTATTGAAGAATAAGACCTTTAGATCTAAAATATCTAAGAACCCAAAATGATAAGGAATCAACCCAAGGGAAAGTAAGATTCAGATTACCTCGTAAATTAAATATCTCAAGGCAAGAAAATTTGTTTGAAATTCGAATTGCTCCACACGACAAGGGGAGAATAGTTGGTTCACCTCAAACTTAGCTGAGAAGGACAACTGTTCAAAGTTCTATTTCATTTAAAAAATATATATTTTCTTAATTTTCTCTTTATATTGAGTTTTTATGATTTTTTTAAAAGTCATGGTCAAAGTTGCTTCCCCCCTTCCTCTCTCAAAAATATTGATATTACTTGCAGTTACTCATGCTACCACAACCACCATTCAAGCCTATTTATTATACGCTGGTCATTATTGACCTTTGTAAGGTACGTGCTTTTGTTATTGATAAAAAAATTGTTGTTTCTTTTTCGTTTCGACCAAAAGTCTTATATGGGAAAATATATGACTATGAGGTATATTTAGGCTCTTCCTGGGGCCTTTCCTGCAGTTGTAGCTGGTGCAGTTCGTGCTCTGTTTGAGAAAATAGCTGATCTAGACATGGAGTGCCGCATACGGCTAATACTTTGGTTTTCACACCATCTGTAAGTTCAAACACTAAAACCTCACTATCATGCGGGCAAACATTAACTTTCTTGCAATACATGCGTTATGGACCTTATGGCTTATTGAATGCATATGTTATTATCTTTTTTCCACATCCGTCTTAGAACACGATATCTAGAAATGCTATCCTATCGCAAGAGAAAACTGTTGAAACTTTTGGCTTGAAAAAAACCCCAAGTTTTGATGCTTTGAGTATCAAAATCTTGTAAACAAATTGGATATTGTTACAAGTAACATCCCTTAAGGTGTTTGTGCTCACATAACTTCCATATGATTGATTCTGAAGTGGGTGCATGCTTTAAGATTCAGGGATTCATTTAATTATGCAAATTTTCTGAAGCAATTTACAATGACAAATGTATGTTATTCTTGTGTTCAAGATGTACGTACTATTTGTGGTTACTTGCACAAAATCATGCTCTCCTTTTAAGGTTAGATTTCCTGGGTATTAACATTATTTCTGCCACTATTTATGCAGATCAAATTTTCAATTTATATGGCCATGGGAAGAATGGGCATATGTTTTAGAACTTCCAAAATGGGCTCCACAGCGAGTGTTTGTTAAGGAGGTTCTGGATAGAGAAGTTCGTCTATCATACTGGGATAAGATTAAGCAGGTATTTGTCATGCTTGGAACTGTATACATTTTTGCCTCCTACTCGGCATGTTTATAAAACAAAACTATAATATCCCACATTGGTTGGGTAGGAGAACGAAACACCCTTTATAAGGGTGTGGAAACCTTCCCCTTGCAGACGTGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAGTATCTGCTAGCGGTAGACTTGGGCTGTTACAAATGGTATCAGAGCCAGACACCGGACTATGTACCAGTGAGGAGGTTGTTCCCCAAAGTGGGTAGACATGAGACGGTGTGCCAGTAAGAACGTTGGGGCCCGAAGGGGGTGGATTTGGTGACGATCTCGCATCGATTGGAGAAAGGAACGAGTGCTAGCGAGGACACCGGGCTCTGAAGGGGGTTGGATTTTAATATCCCACATTGGTTGGGGAGGAGAACGAAACACCCTTTACAAGGGTGTGGAAACCTTCCCCTAGCATACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAACCCAAAGAGGACAATATCTGCTAGTGGTGGACTTAGGCCGTTACAAAAACGGTCCTTCATAGAAAATACAGAATGTATAATTTATCGGGCAGCATGAGAAGAACAATGAGTTACAAAGGATCTGCCGGACGGTGGCTATGGTAATGTGGGATGTTTCATCTTTCAATATTTGTGTATGCCTGATAAATCAGAACATGAGATAAATATGAGCTTATCCTTCCTGGTTTTGCACTTTGTTCTCTGACATGTCAAGTACATTGTGACTATGTAGAGCATCGAGAATGCGCCCGGTTTAGAAGAGTTGCTACCTCCCAAGGGCGGACCAAACTTCAAATTTTCTACAGAAGACGACGGAGAAAAAAATGAACAACACGCACTTTCTGCTGAATTATACAATATGGTGAAAGGACGGGCTGCAGCACGGGAAGTAATTTCATGGCTCGATGAAACTGTAATTCCTAAGCATGGTTTTGATGTTTCGCTCGTGGTGATCGTGCAAACTCTTCTAGATATTGGGTCAAAGAGTTTCACTCATTTGATAACAGTTTTGGAGAGATATGGTCAAGTGATTTCAAGAATATGCCCTGATCAGGATAAGCAGGTCTTGCTTATATCTGAAGTGAGTTCTTACTGGAAGAACAATACTCAAATGACGGCAATAGCAATTGATAGAATGATGGGTTACAGGTTAATATCCAATTTGGCCATTATCAGATGGATCTTTTCTCCAGAAAACATCGAGCAGTATCATACGTCAGATCGTCCATGGGAGGTACATGGTTCCCGTTCATTTTCGATACTTTGCCACAGATTCTCGTTATTATTCGTCGTTCGATTTCAACACGATTTAATTTATGTTTTCTTCAAGCTTTCTGGATTAAGTGATGGTAACTCATGGAAATAAGTTTTAACTAAAATTTTTTCTTATTACCTCATCCACAGATATTAAGGAATGCGTTGTGCAAGACGTATAATCGTATTTCCGATCTTAGGAAAGAAATATCCTCCCTGAAGAAAGATATTGTGGCAGCTGAAGAAGCTGTAGCGAAGACACAAGACGAGTTGAACGCTGCTGAATCGAAGCTCGCACTTGTCGATGGTGAACCTGTTATGGGAGAGAATCCTGTAAGGCTGAAGCGATTTGAAATCCTATGCTGAAAAAGCAAAAGAGCAGGAAGAATCGATACGAGACTCGTTGGAAGCCAAAGAAGCTCTTCTTGCCCGAGCGCTCGAGGAGAACGAGGTATGGATTCTAAGTCTAGAAATGACGTTCACCTCCTTCATCGAACATGGACCGACATTGAGAGTTAGCAACTTAGCGCCTTATCTCTTTCCATGTGCAGACATTATTTCTATCCTTATTCAAAAGCTTCTCCAGTATATTGACCGAACGCCTTCCAGCGGCATCTAGCGTACAAACGCTGCAGGATTTGAAGTCTATTAATCCAACCGATACGAATGCTATGGACCTCGAAGAAGAACCAGCAGCCATGGATATGGACAATGAAGATTCAAGACCTGAAAAAAGGTTTTCTTGTCAAGAAGATGATGATCCATTATATTTTTGCCTTCTCACTTTCTTCCATTATGAGTTTGGTGCACGTTGGTTGGGGAAGAGAACAAAACACCCTTCATAAGGGTGTGGAAACCTTCCCCTAGCAGACGTGTTTTAAAGTCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATAGGGGCAAGCGGTGGACCTGGGTAGTTACAAGTTTACTTTGTTTTCTTCATTTTGCAGTCAAGTGAACGGTGGGACAGAGCATGCTTACACTGTAGGTGAAAATGAACAATGGTGTTTAACAACCTTAGGATACGTCAAGGCCTTCTCGAGACAATACGCTTCCGAGGTACTTTCCGTTTCTTAGAGCGCCATACTTTGAGGACTGCCAATCATAAAAACTAATAATGATACAAAAACAATTATGGTCTGTATCGAAAACTATCAGAACAACATGACCCGAACGCTAATATTTTCTCGAACCATTTATCGTGATATTCACAGATATGGCCACACATCGAGAAGTTGGATGCAGAAGTCTTGTTATCAGAAGATGCACACCCGCTTTTCATTAAAGCAGTCTACTGCAGCCTACGTCGATCTATGGACTCGATCTAACAGCGTAATCGGATTTGTTTTAGTATTAAACATTTTCTATTTATCCCCTCAATCCTTCTTCTGTTTTCTTTTTGTAGATTAGGTAGATAGATCACTACGTAACATTTGGCTACACGAAAAATGCATATTAGGCTAGCCAATCGTTATAGATACCGGTTTAATTGTACTTGTCGAGTTATGTTCATGGATTCGTGTATCATAATATCTATCTTAAATTGCTCGGGTGTTACGATCATTTATTTCGTCACGAAATGACAATTTTCTTTCCATATCTTCCAAGCAAAGAGTTATGATATGGGATTGTGCAGATCTGGACAGGGATGGAACTTTAGATGATGGATGATTGAAACCAAGGAATGAGATGATGAGGTTAAAAGAACAGAGCTTGTATGTACCTTTTCATTTCGAGTACTTAAATTATGCCTCATCTCGTCGATATGGACTAGAGCCTACGAGGGCCGAGGCCAACCACAACACCACATCTAATTTGTTGGAATCTATGAACGAACAAACTGGTAAAAAAATTTAGGTTCACTCATGTAGACA

mRNA sequence

TAAAGCATCTTCGCTTTTACAGTCCCGTGTGTTGATTCGAACCCACTTCCCCATCTCCTCATTTTCCCTCTACGACCTTTTTTTTTTCTTCTTCTGGGTAGTAATGAGCAGCTGGAAGAGTCTTCTTCTTCGAATTGGCGACAAGTCCCCGGAATATGGCACCTCCTCCGACTTCAAAGACCATATTGAAACTTGCTTTGGTGCGATTCGGCGGGAGCTGGATCACTATGGAGATGAAGTTTTGCCTTTCCTTCTACAATGCGTTGAACAATTGCCTCATAAGACTCCTTTGTACGGGACATTGATTGGGTTAATAAACTTGGAAAATGAAGACTTCGTGAAGAAAATTGTGGACCAAACTCACAAAAGTTTTCAGGATGCCTTAAACACTGGAAATTGCCACGGGATTCGAATTTTGTTACGCTTTCTAACTACCCTGATGAGCAGTAAAGTCCTGCTGTCCACTTCTCTAGTTGTTGTTTTTGAAACATTATTATCTTCAGCTGCCACAACAGTGGATGAAGAGAAGGGAAACCCTGCATGGCAGGCACGCGCTGACTTTTACATATCTTGCATTCTCTCCTGTTTTCCCTGGGGAGGAGCTGAACTGGTTGAGCAAGTTCCTGAAGAGCTCGAGAGAGTAATGGTTGGAGTAGAAGCTTACTTAAGCATTCGAAGGCATACCGTGGACACTGGTTTATCCTTTTTTGAGGATGCTGGTGAAGTTGAGAAAACTCTTAATGAGAAGGATTTTTTAGAAGATTTATGGGGACGCATACAAGCGTTATCTAGTGATGGATGGAAAGTGGATAGTGTTCCAAGGCCCCACCTTCTATTTGAAGCTCAGCTAGTTGCTGGTAAGTCTCATGAATTTGGAAGCATCAGCTGTCCGGAGCAACCTGATTCACCTTCAACACCTTCTGGCATTACTTATGGTAAACAGAAGTATGATGCAGAGTTTAGAATCCTCTAGTTGTGCTACACATTTCTAGATACCTATGGTATCGACGATACAGGATCTGCAACCTATTGATCGTTTTGTCGTGGAGGAGTATCTTTTAGATGTGCTTCTTTTCTTCAATGGCTGTCGAAAGGAATGTGCGTCTTTCATGGTTGGTCTCCCTGTACCTTTTAGATATGAGTATCTTATGGCAGAGACAATCTTCTCGCAGTTACTCATGCTACCACAACCACCATTCAAGCCTATTTATTATACGCTGGTCATTATTGACCTTTGTAAGGCTCTTCCTGGGGCCTTTCCTGCAGTTGTAGCTGGTGCAGTTCGTGCTCTGTTTGAGAAAATAGCTGATCTAGACATGGAGTGCCGCATACGGCTAATACTTTGGTTTTCACACCATCTATCAAATTTTCAATTTATATGGCCATGGGAAGAATGGGCATATGTTTTAGAACTTCCAAAATGGGCTCCACAGCGAGTGTTTGTTAAGGAGGTTCTGGATAGAGAAGTTCGTCTATCATACTGGGATAAGATTAAGCAGAGCATCGAGAATGCGCCCGGTTTAGAAGAGTTGCTACCTCCCAAGGGCGGACCAAACTTCAAATTTTCTACAGAAGACGACGGAGAAAAAAATGAACAACACGCACTTTCTGCTGAATTATACAATATGGTGAAAGGACGGGCTGCAGCACGGGAAGTAATTTCATGGCTCGATGAAACTGTAATTCCTAAGCATGGTTTTGATGTTTCGCTCGTGGTGATCGTGCAAACTCTTCTAGATATTGGGTCAAAGAGTTTCACTCATTTGATAACAGTTTTGGAGAGATATGGTCAAGTGATTTCAAGAATATGCCCTGATCAGGATAAGCAGGTCTTGCTTATATCTGAAGTGAGTTCTTACTGGAAGAACAATACTCAAATGACGGCAATAGCAATTGATAGAATGATGGGTTACAGGTTAATATCCAATTTGGCCATTATCAGATGGATCTTTTCTCCAGAAAACATCGAGCAGTATCATACGTCAGATCGTCCATGGGAGATATTAAGGAATGCGTTGTGCAAGACGTATAATCGTATTTCCGATCTTAGGAAAGAAATATCCTCCCTGAAGAAAGATATTGTGGCAGCTGAAGAAGCTGTAGCGAAGACACAAGACGAGTTGAACGCTGCTGAATCGAAGCTCGCACTTGTCGATGGTGAACCTGTTATGGGAGAGAATCCTGTAAGGCTGAAGCGATTTGAAATCCTATGCTGAAAAAGCAAAAGAGCAGGAAGAATCGATACGAGACTCGTTGGAAGCCAAAGAAGCTCTTCTTGCCCGAGCGCTCGAGGAGAACGAGACATTATTTCTATCCTTATTCAAAAGCTTCTCCAGTATATTGACCGAACGCCTTCCAGCGGCATCTAGCGTACAAACGCTGCAGGATTTGAAGTCTATTAATCCAACCGATACGAATGCTATGGACCTCGAAGAAGAACCAGCAGCCATGGATATGGACAATGAAGATTCAAGACCTGAAAAAAGTCAAGTGAACGGTGGGACAGAGCATGCTTACACTGTAGGTGAAAATGAACAATGGTGTTTAACAACCTTAGGATACGTCAAGGCCTTCTCGAGACAATACGCTTCCGAGATATGGCCACACATCGAGAAGTTGGATGCAGAAGTCTTGTTATCAGAAGATGCACACCCGCTTTTCATTAAAGCAGTCTACTGCAGCCTACGTCGATCTATGGACTCGATCTAACAGCGTAATCGGATTTGTTTTAGTATTAAACATTTTCTATTTATCCCCTCAATCCTTCTTCTGTTTTCTTTTTGTAGATTAGGTAGATAGATCACTACGTAACATTTGGCTACACGAAAAATGCATATTAGGCTAGCCAATCGTTATAGATACCGGTTTAATTGTACTTGTCGAGTTATGTTCATGGATTCGTGTATCATAATATCTATCTTAAATTGCTCGGGTGTTACGATCATTTATTTCGTCACGAAATGACAATTTTCTTTCCATATCTTCCAAGCAAAGAGTTATGATATGGGATTGTGCAGATCTGGACAGGGATGGAACTTTAGATGATGGATGATTGAAACCAAGGAATGAGATGATGAGGTTAAAAGAACAGAGCTTGTATGTACCTTTTCATTTCGAGTACTTAAATTATGCCTCATCTCGTCGATATGGACTAGAGCCTACGAGGGCCGAGGCCAACCACAACACCACATCTAATTTGTTGGAATCTATGAACGAACAAACTGGTAAAAAAATTTAGGTTCACTCATGTAGACA

Coding sequence (CDS)

ATGGTATCGACGATACAGGATCTGCAACCTATTGATCGTTTTGTCGTGGAGGAGTATCTTTTAGATGTGCTTCTTTTCTTCAATGGCTGTCGAAAGGAATGTGCGTCTTTCATGGTTGGTCTCCCTGTACCTTTTAGATATGAGTATCTTATGGCAGAGACAATCTTCTCGCAGTTACTCATGCTACCACAACCACCATTCAAGCCTATTTATTATACGCTGGTCATTATTGACCTTTGTAAGGCTCTTCCTGGGGCCTTTCCTGCAGTTGTAGCTGGTGCAGTTCGTGCTCTGTTTGAGAAAATAGCTGATCTAGACATGGAGTGCCGCATACGGCTAATACTTTGGTTTTCACACCATCTATCAAATTTTCAATTTATATGGCCATGGGAAGAATGGGCATATGTTTTAGAACTTCCAAAATGGGCTCCACAGCGAGTGTTTGTTAAGGAGGTTCTGGATAGAGAAGTTCGTCTATCATACTGGGATAAGATTAAGCAGAGCATCGAGAATGCGCCCGGTTTAGAAGAGTTGCTACCTCCCAAGGGCGGACCAAACTTCAAATTTTCTACAGAAGACGACGGAGAAAAAAATGAACAACACGCACTTTCTGCTGAATTATACAATATGGTGAAAGGACGGGCTGCAGCACGGGAAGTAATTTCATGGCTCGATGAAACTGTAATTCCTAAGCATGGTTTTGATGTTTCGCTCGTGGTGATCGTGCAAACTCTTCTAGATATTGGGTCAAAGAGTTTCACTCATTTGATAACAGTTTTGGAGAGATATGGTCAAGTGATTTCAAGAATATGCCCTGATCAGGATAAGCAGGTCTTGCTTATATCTGAAGTGAGTTCTTACTGGAAGAACAATACTCAAATGACGGCAATAGCAATTGATAGAATGATGGGTTACAGGTTAATATCCAATTTGGCCATTATCAGATGGATCTTTTCTCCAGAAAACATCGAGCAGTATCATACGTCAGATCGTCCATGGGAGATATTAAGGAATGCGTTGTGCAAGACGTATAATCGTATTTCCGATCTTAGGAAAGAAATATCCTCCCTGAAGAAAGATATTGTGGCAGCTGAAGAAGCTGTAGCGAAGACACAAGACGAGTTGAACGCTGCTGAATCGAAGCTCGCACTTGTCGATGGTGAACCTGTTATGGGAGAGAATCCTGTAAGGCTGAAGCGATTTGAAATCCTATGCTGA

Protein sequence

MVSTIQDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLMLPQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLSNFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPKGGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIVQTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRMMGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIVAAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRFEILC

Homology

[Close]

BLAST of Carg25434 vs. NCBI nr
Match: KAG7022099.1 (Nuclear cap-binding protein subunit 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 813.9 bits (2101), Expect = 6.1e-232
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MVSTIQDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLL 60
           MVSTIQDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLL
Sbjct: 1   MVSTIQDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLL 60

Query: 61  MLPQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHH 120
           MLPQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHH
Sbjct: 61  MLPQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHH 120

Query: 121 LSNFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLP 180
           LSNFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLP
Sbjct: 121 LSNFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLP 180

Query: 181 PKGGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVV 240
           PKGGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVV
Sbjct: 181 PKGGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVV 240

Query: 241 IVQTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAID 300
           IVQTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAID
Sbjct: 241 IVQTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAID 300

Query: 301 RMMGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKD 360
           RMMGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKD
Sbjct: 301 RMMGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKD 360

Query: 361 IVAAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRFEILC 406
           IVAAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRFEILC
Sbjct: 361 IVAAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRFEILC 405

[Close]

BLAST of Carg25434 vs. NCBI nr
Match: KAG6588203.1 (Nuclear cap-binding protein subunit 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 795.0 bits (2052), Expect = 2.9e-226
Identity = 395/400 (98.75%), Postives = 397/400 (99.25%), Query Frame = 0


Query: 3   STIQDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML 62
           S  +DLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML
Sbjct: 301 SKFEDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML 360

Query: 63  PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 122
           PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS
Sbjct: 361 PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 420

Query: 123 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK 182
           NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK
Sbjct: 421 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK 480

Query: 183 GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV 242
           GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV
Sbjct: 481 GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV 540

Query: 243 QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM 302
           QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM
Sbjct: 541 QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM 600

Query: 303 MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV 362
           MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV
Sbjct: 601 MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV 660

Query: 363 AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRFE 403
           AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKR +
Sbjct: 661 AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRLK 700

[Close]

BLAST of Carg25434 vs. NCBI nr
Match: XP_022931611.1 (nuclear cap-binding protein subunit 1-like [Cucurbita moschata])

HSP 1 Score: 795.0 bits (2052), Expect = 2.9e-226
Identity = 395/400 (98.75%), Postives = 397/400 (99.25%), Query Frame = 0


Query: 3   STIQDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML 62
           S  +DLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML
Sbjct: 301 SKFEDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML 360

Query: 63  PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 122
           PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS
Sbjct: 361 PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 420

Query: 123 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK 182
           NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK
Sbjct: 421 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK 480

Query: 183 GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV 242
           GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV
Sbjct: 481 GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV 540

Query: 243 QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM 302
           QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM
Sbjct: 541 QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM 600

Query: 303 MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV 362
           MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV
Sbjct: 601 MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV 660

Query: 363 AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRFE 403
           AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKR +
Sbjct: 661 AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRLK 700

[Close]

BLAST of Carg25434 vs. NCBI nr
Match: XP_023530943.1 (nuclear cap-binding protein subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 793.5 bits (2048), Expect = 8.6e-226
Identity = 394/400 (98.50%), Postives = 396/400 (99.00%), Query Frame = 0


Query: 3   STIQDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML 62
           S  +DLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML
Sbjct: 301 SKFEDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML 360

Query: 63  PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 122
           PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS
Sbjct: 361 PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 420

Query: 123 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK 182
           NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK
Sbjct: 421 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK 480

Query: 183 GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV 242
           GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV
Sbjct: 481 GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV 540

Query: 243 QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM 302
           QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM
Sbjct: 541 QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM 600

Query: 303 MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV 362
           MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV
Sbjct: 601 MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV 660

Query: 363 AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRFE 403
           AAEEAV KTQDELNAAESKLALVDGEPVMGENPVRLKR +
Sbjct: 661 AAEEAVVKTQDELNAAESKLALVDGEPVMGENPVRLKRLK 700

[Close]

BLAST of Carg25434 vs. NCBI nr
Match: XP_023004357.1 (nuclear cap-binding protein subunit 1-like [Cucurbita maxima])

HSP 1 Score: 791.6 bits (2043), Expect = 3.3e-225
Identity = 392/400 (98.00%), Postives = 397/400 (99.25%), Query Frame = 0


Query: 3   STIQDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML 62
           S  +DLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML
Sbjct: 301 SKFEDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML 360

Query: 63  PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 122
           PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS
Sbjct: 361 PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 420

Query: 123 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK 182
           NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQS+ENAPGLEELLPPK
Sbjct: 421 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSVENAPGLEELLPPK 480

Query: 183 GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV 242
           GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWL+ETVIPKHGFDVSLVVIV
Sbjct: 481 GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLNETVIPKHGFDVSLVVIV 540

Query: 243 QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM 302
           QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM
Sbjct: 541 QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM 600

Query: 303 MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV 362
           MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV
Sbjct: 601 MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV 660

Query: 363 AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRFE 403
           AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVR+KR +
Sbjct: 661 AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRVKRLK 700

[Close]

BLAST of Carg25434 vs. ExPASy Swiss-Prot
Match: Q9SIU2 (Nuclear cap-binding protein subunit 1 OS=Arabidopsis thaliana OX=3702 GN=ABH1 PE=1 SV=2)

HSP 1 Score: 632.5 bits (1630), Expect = 3.3e-180
Identity = 295/398 (74.12%), Postives = 353/398 (88.69%), Query Frame = 0


Query: 5   IQDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLMLPQ 64
           ++D+QPIDRFVVEEYLLDVL + NGCRKECAS+M  LPV FRYEYLMAET+FSQ+L+LPQ
Sbjct: 302 MEDVQPIDRFVVEEYLLDVLFYLNGCRKECASYMANLPVTFRYEYLMAETLFSQILLLPQ 361

Query: 65  PPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLSNF 124
           PPFK +YYTLVI+DLCKALPGAFPAVVAGAVRALFEKI+DLDME R RLILWFSHHLSNF
Sbjct: 362 PPFKTLYYTLVIMDLCKALPGAFPAVVAGAVRALFEKISDLDMESRTRLILWFSHHLSNF 421

Query: 125 QFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPKGG 184
           QFIWPWEEWA+VL+LPKWAP+RVFV+E+L REVRLSYWDKIKQSIENA  LEELLPPK G
Sbjct: 422 QFIWPWEEWAFVLDLPKWAPKRVFVQEILQREVRLSYWDKIKQSIENATALEELLPPKAG 481

Query: 185 PNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIVQT 244
           PNF +S E+  EK E+  LSAEL   VK +  AR++I W++ET+ P HGF+V+L ++VQT
Sbjct: 482 PNFMYSLEEGKEKTEEQQLSAELSRKVKEKQTARDMIVWIEETIYPVHGFEVTLTIVVQT 541

Query: 245 LLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRMMG 304
           LLDIGSKSFTHL+TVLERYGQV S++CPD DKQV+L+S+VS+YWKNN QMTA+AIDRMMG
Sbjct: 542 LLDIGSKSFTHLVTVLERYGQVFSKLCPDNDKQVMLLSQVSTYWKNNVQMTAVAIDRMMG 601

Query: 305 YRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIVAA 364
           YRL+SN AI+RW+FSPEN++Q+H SD+PWEIL NAL KTYNRISDLRK+IS++ K+++ A
Sbjct: 602 YRLVSNQAIVRWVFSPENVDQFHVSDQPWEILGNALNKTYNRISDLRKDISNITKNVLVA 661

Query: 365 EEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRFE 403
           E+A A  + EL AAESKL+LV+GEPV+GENP ++KR +
Sbjct: 662 EKASANARVELEAAESKLSLVEGEPVLGENPAKMKRLK 699

[Close]

BLAST of Carg25434 vs. ExPASy Swiss-Prot
Match: Q10LJ0 (Nuclear cap-binding protein subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ABH1 PE=2 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 2.9e-168
Identity = 278/397 (70.03%), Postives = 342/397 (86.15%), Query Frame = 0


Query: 6   QDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLMLPQP 65
           +++QP+DRFVVEE +LDVLLFFNGCRKECA ++V LPVPFRYEYLMAETIFSQLL+LP P
Sbjct: 302 ENMQPVDRFVVEECILDVLLFFNGCRKECAFYLVSLPVPFRYEYLMAETIFSQLLLLPNP 361

Query: 66  PFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLSNFQ 125
           PF+PIYYTLVIIDLCKALPGAFP+VV GAV ALF++I+++DMECR RLILWFSHHLSNFQ
Sbjct: 362 PFRPIYYTLVIIDLCKALPGAFPSVVVGAVHALFDRISNMDMECRTRLILWFSHHLSNFQ 421

Query: 126 FIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPKGGP 185
           FIWPW+EWAYV +LPKWAPQRVFV+EVL+RE+RLSY+DKIKQSIE+A  LEELLPPK GP
Sbjct: 422 FIWPWQEWAYVKDLPKWAPQRVFVQEVLEREIRLSYFDKIKQSIEDAVELEELLPPKAGP 481

Query: 186 NFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIVQTL 245
           NF++ +++  E  + H LS EL  MV+GR    ++ISW+DE +IP +G   +L V+ QTL
Sbjct: 482 NFRYHSDEGKESTDGHRLSKELVAMVRGRKTQGDIISWVDEKIIPVNGAKFALDVVSQTL 541

Query: 246 LDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRMMGY 305
           LDIGSKSFTHLITVLERYGQ+IS++CP+++ Q+LL+ EVS+YWKN+TQM AIAIDRMMGY
Sbjct: 542 LDIGSKSFTHLITVLERYGQIISKLCPNEEMQLLLMDEVSAYWKNSTQMIAIAIDRMMGY 601

Query: 306 RLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIVAAE 365
           RL+SNLAI++W+FSP N++Q+H SDRPWEILRNA+ KTYNRI DLRKEI +L+K + AA+
Sbjct: 602 RLLSNLAIVKWVFSPANVDQFHVSDRPWEILRNAVSKTYNRIFDLRKEIQTLRKGLQAAK 661

Query: 366 EAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRFE 403
           EA  K   EL  A+S + +VDG+PV  ENP RL+R +
Sbjct: 662 EASEKAARELEEAKSIIEIVDGQPVPSENPGRLRRLQ 698

[Close]

BLAST of Carg25434 vs. ExPASy Swiss-Prot
Match: Q55D17 (Nuclear cap-binding protein subunit 1 OS=Dictyostelium discoideum OX=44689 GN=ncbp1 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.3e-51
Identity = 132/426 (30.99%), Postives = 210/426 (49.30%), Query Frame = 0


Query: 11  IDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLMLPQPPFKPI 70
           ++R++VE+Y++D+L FFN   KEC+ F+  LPV    + ++ ETI  ++ MLP+P FKPI
Sbjct: 311 VERYIVEDYIIDILSFFNSDHKECSKFIYSLPVENEIDDIVVETILGEMFMLPEPTFKPI 370

Query: 71  YYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLSNFQFIWPW 130
           YY+++ +D  K+ P   P V A A+  LFE I  LD E   R  L F+HHLSNF + W W
Sbjct: 371 YYSVLFVDFFKSQPSVIP-VFAYAINLLFENIHKLDFEVMDRFALAFAHHLSNFDYKWIW 430

Query: 131 EEWAYVLELPKWAP----------------------------------------QRVFVK 190
            +WA  L  P  A                                         + +++K
Sbjct: 431 SDWAQSLVPPTAAAAAAAATTTVEGSTSNENKEDSTATTTAIIEDENQIRNRELRIIYIK 490

Query: 191 EVLDREVRLSYWDKIKQSIENAPGLEELLPPKGGPNFKFSTEDDGEKNEQHALSAELYNM 250
            VL    RLSY +KIKQ++ +     + LPP   P FKF   D+ E+ E   L AE + +
Sbjct: 491 RVLSSLCRLSYLEKIKQNLPSE--YHQYLPPSPAPTFKFLNADNPEE-ESKELIAESHKL 550

Query: 251 V---KGRAAAREVISWLDETVIPKHGFDVSLV-VIVQTLLDIGSKSFTHLITVLERYGQV 310
           +   K +     +IS +    IP H   +++V ++ + +L IGS SF+HL   +ERY  +
Sbjct: 551 LLSFKTKEPLENIISHVAN--IPSH---INIVELLTKCILQIGSTSFSHLTYAIERYITL 610

Query: 311 ISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRMMGYRLISNLAIIRWIFSPENIEQY 370
              +   QD +   I  +  +WK + Q   I +D+ + +++I  +  + W   PENI+++
Sbjct: 611 FKTVLKSQDDRQECIRSIFEFWKLSHQHIVIVVDKFVTFKIIYPIDTVTWFMKPENIDRF 670

Query: 371 HTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIVAAEEAVAKTQDELNAAESKLALVD 393
            T    WE L N++ KT   I  L  ++          E    + + +LN + S+  L+ 
Sbjct: 671 ITEPFTWECLHNSIQKTIIIIQTLTLDLE---------ENQSQEKEFKLNTSISEQQLLL 718

[Close]

BLAST of Carg25434 vs. ExPASy Swiss-Prot
Match: B4GW22 (Nuclear cap-binding protein subunit 1 OS=Drosophila persimilis OX=7234 GN=Cbp80 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 9.4e-50
Identity = 113/384 (29.43%), Postives = 205/384 (53.39%), Query Frame = 0


Query: 11  IDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFR--YEYLMAETIFSQLLMLPQPPFK 70
           I+RF++EE+L  ++  ++  RK+CA+ ++  P   +   EY + E IF++L  +P P + 
Sbjct: 312 IERFLIEEHLHHIIETYHHERKDCAAQLLSFPFKHKIPLEYCIVEVIFAELFHMPTPRYL 371

Query: 71  PIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLSNFQFIW 130
            I Y  ++I+LCK  P   P V+A A   LF +I  ++  C  R + WFS+HLSNF+F W
Sbjct: 372 DICYGSILIELCKLQPATLPQVLAQATEILFMRIDSMNTSCFDRFVNWFSYHLSNFKFTW 431

Query: 131 PWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPKGGPNFK 190
            W+EW   L L    P+  F++EVL + +RLSY  +I + +    G  +L+P    PNFK
Sbjct: 432 SWDEWDSCLLLDGEHPRPKFIQEVLQKCLRLSYHQRITEMMPTTYG--KLIPQVPVPNFK 491

Query: 191 FSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFD-----------VS 250
           +++E +       A++ +L   ++ + +  EV++ L E  IP  G+            + 
Sbjct: 492 YASE-EAASLPGTAVAHQLVVAIRQKCSPEEVVNILKE--IPNSGYSGEEMSDGTFNALK 551

Query: 251 LVVIVQTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAI 310
           + V VQTLL++GSKSF+H    + ++  V   +   ++ Q+ ++  +   W ++ QM  +
Sbjct: 552 IDVFVQTLLNLGSKSFSHSFAAISKFHSVFRALAETEEAQICVLHNIYELWSSHQQMMVV 611

Query: 311 AIDRMMGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSL 370
            +D+++  +++   A+  WIFS E   ++ T    WEIL   + K    +  L  E+S  
Sbjct: 612 LVDKLLKLQIVDCSAVATWIFSKEMTSEF-TKMYLWEILHLTIKKMNKHVIKLNTELSVA 671

Query: 371 KKDIVAAEEAVAKTQDELNAAESK 382
           K  +  A+ + +++ ++      K
Sbjct: 672 KDKLSKADSSSSESDEDAPTKRKK 689

[Close]

BLAST of Carg25434 vs. ExPASy Swiss-Prot
Match: Q29G82 (Nuclear cap-binding protein subunit 1 OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=Cbp80 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 9.4e-50
Identity = 113/384 (29.43%), Postives = 205/384 (53.39%), Query Frame = 0


Query: 11  IDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFR--YEYLMAETIFSQLLMLPQPPFK 70
           I+RF++EE+L  ++  ++  RK+CA+ ++  P   +   EY + E IF++L  +P P + 
Sbjct: 312 IERFLIEEHLHHIIETYHHERKDCAAQLLSFPFKHKIPLEYCIVEVIFAELFHMPTPRYL 371

Query: 71  PIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLSNFQFIW 130
            I Y  ++I+LCK  P   P V+A A   LF +I  ++  C  R + WFS+HLSNF+F W
Sbjct: 372 DICYGSILIELCKLQPATLPQVLAQATEILFMRIDSMNTSCFDRFVNWFSYHLSNFKFTW 431

Query: 131 PWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPKGGPNFK 190
            W+EW   L L    P+  F++EVL + +RLSY  +I + +    G  +L+P    PNFK
Sbjct: 432 SWDEWDSCLLLDGEHPRPKFIQEVLQKCLRLSYHQRITEMMPTTYG--KLIPQVPVPNFK 491

Query: 191 FSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFD-----------VS 250
           +++E +       A++ +L   ++ + +  EV++ L E  IP  G+            + 
Sbjct: 492 YASE-EAASLPGTAVAHQLVVAIRQKCSPEEVVNILKE--IPNSGYSGEEMSDGTFNALK 551

Query: 251 LVVIVQTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAI 310
           + V VQTLL++GSKSF+H    + ++  V   +   ++ Q+ ++  +   W ++ QM  +
Sbjct: 552 IDVFVQTLLNLGSKSFSHSFAAISKFHSVFRALAETEEAQICVLHNIYELWSSHQQMMVV 611

Query: 311 AIDRMMGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSL 370
            +D+++  +++   A+  WIFS E   ++ T    WEIL   + K    +  L  E+S  
Sbjct: 612 LVDKLLKLQIVDCSAVATWIFSKEMTSEF-TKMYLWEILHLTIKKMNKHVIKLNTELSVA 671

Query: 371 KKDIVAAEEAVAKTQDELNAAESK 382
           K  +  A+ + +++ ++      K
Sbjct: 672 KDKLSKADSSSSESDEDAPTKRKK 689

[Close]

BLAST of Carg25434 vs. ExPASy TrEMBL
Match: A0A6J1EU52 (nuclear cap-binding protein subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111437775 PE=3 SV=1)

HSP 1 Score: 795.0 bits (2052), Expect = 1.4e-226
Identity = 395/400 (98.75%), Postives = 397/400 (99.25%), Query Frame = 0


Query: 3   STIQDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML 62
           S  +DLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML
Sbjct: 301 SKFEDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML 360

Query: 63  PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 122
           PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS
Sbjct: 361 PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 420

Query: 123 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK 182
           NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK
Sbjct: 421 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK 480

Query: 183 GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV 242
           GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV
Sbjct: 481 GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV 540

Query: 243 QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM 302
           QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM
Sbjct: 541 QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM 600

Query: 303 MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV 362
           MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV
Sbjct: 601 MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV 660

Query: 363 AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRFE 403
           AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKR +
Sbjct: 661 AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRLK 700

[Close]

BLAST of Carg25434 vs. ExPASy TrEMBL
Match: A0A6J1KQ76 (nuclear cap-binding protein subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111497696 PE=3 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 1.6e-225
Identity = 392/400 (98.00%), Postives = 397/400 (99.25%), Query Frame = 0


Query: 3   STIQDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML 62
           S  +DLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML
Sbjct: 301 SKFEDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML 360

Query: 63  PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 122
           PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS
Sbjct: 361 PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 420

Query: 123 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK 182
           NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQS+ENAPGLEELLPPK
Sbjct: 421 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSVENAPGLEELLPPK 480

Query: 183 GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV 242
           GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWL+ETVIPKHGFDVSLVVIV
Sbjct: 481 GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLNETVIPKHGFDVSLVVIV 540

Query: 243 QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM 302
           QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM
Sbjct: 541 QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM 600

Query: 303 MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV 362
           MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV
Sbjct: 601 MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV 660

Query: 363 AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRFE 403
           AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVR+KR +
Sbjct: 661 AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRVKRLK 700

[Close]

BLAST of Carg25434 vs. ExPASy TrEMBL
Match: A0A5D3DWR2 (Nuclear cap-binding protein subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G001130 PE=3 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 1.3e-216
Identity = 371/400 (92.75%), Postives = 391/400 (97.75%), Query Frame = 0


Query: 3   STIQDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML 62
           S  +D+QPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLL+L
Sbjct: 311 SKFEDVQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLLL 370

Query: 63  PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 122
           PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS
Sbjct: 371 PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 430

Query: 123 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK 182
           NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDK+KQSIENAPGLEELLPPK
Sbjct: 431 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKVKQSIENAPGLEELLPPK 490

Query: 183 GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV 242
           GGP+FKFS EDDGEK+EQHALSAELYNMVKGRA ARE+ISWLDE+VIPKHG DVSLVV+V
Sbjct: 491 GGPSFKFSAEDDGEKSEQHALSAELYNMVKGRAPARELISWLDESVIPKHGLDVSLVVVV 550

Query: 243 QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM 302
           QTLLDIGSKSFTHLITVLERYGQVISRIC DQDKQVLLISEV SYWKNNTQMTAIAIDRM
Sbjct: 551 QTLLDIGSKSFTHLITVLERYGQVISRICHDQDKQVLLISEVGSYWKNNTQMTAIAIDRM 610

Query: 303 MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV 362
           MGYRLISNL+I++WIFSPEN++QYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKD+V
Sbjct: 611 MGYRLISNLSIVKWIFSPENLQQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDVV 670

Query: 363 AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRFE 403
           AAEEAVA+TQ+EL AAESKL+LVDGEPV+GENPVRLKR +
Sbjct: 671 AAEEAVARTQEELGAAESKLSLVDGEPVLGENPVRLKRLK 710

[Close]

BLAST of Carg25434 vs. ExPASy TrEMBL
Match: A0A1S3BQ48 (nuclear cap-binding protein subunit 1 OS=Cucumis melo OX=3656 GN=LOC103492007 PE=3 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 1.3e-216
Identity = 371/400 (92.75%), Postives = 391/400 (97.75%), Query Frame = 0


Query: 3   STIQDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML 62
           S  +D+QPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLL+L
Sbjct: 301 SKFEDVQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLLL 360

Query: 63  PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 122
           PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS
Sbjct: 361 PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 420

Query: 123 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK 182
           NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDK+KQSIENAPGLEELLPPK
Sbjct: 421 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKVKQSIENAPGLEELLPPK 480

Query: 183 GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV 242
           GGP+FKFS EDDGEK+EQHALSAELYNMVKGRA ARE+ISWLDE+VIPKHG DVSLVV+V
Sbjct: 481 GGPSFKFSAEDDGEKSEQHALSAELYNMVKGRAPARELISWLDESVIPKHGLDVSLVVVV 540

Query: 243 QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM 302
           QTLLDIGSKSFTHLITVLERYGQVISRIC DQDKQVLLISEV SYWKNNTQMTAIAIDRM
Sbjct: 541 QTLLDIGSKSFTHLITVLERYGQVISRICHDQDKQVLLISEVGSYWKNNTQMTAIAIDRM 600

Query: 303 MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV 362
           MGYRLISNL+I++WIFSPEN++QYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKD+V
Sbjct: 601 MGYRLISNLSIVKWIFSPENLQQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDVV 660

Query: 363 AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRFE 403
           AAEEAVA+TQ+EL AAESKL+LVDGEPV+GENPVRLKR +
Sbjct: 661 AAEEAVARTQEELGAAESKLSLVDGEPVLGENPVRLKRLK 700

[Close]

BLAST of Carg25434 vs. ExPASy TrEMBL
Match: A0A0A0M082 (MIF4G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G616300 PE=3 SV=1)

HSP 1 Score: 760.0 bits (1961), Expect = 5.1e-216
Identity = 370/400 (92.50%), Postives = 391/400 (97.75%), Query Frame = 0


Query: 3   STIQDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML 62
           S  +D+QPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLL+L
Sbjct: 301 SKFEDVQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLLL 360

Query: 63  PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 122
           PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS
Sbjct: 361 PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS 420

Query: 123 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPK 182
           NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDK+KQSIENAPGLEELLPPK
Sbjct: 421 NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKVKQSIENAPGLEELLPPK 480

Query: 183 GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIV 242
           GGP+FKFSTEDDGEK+EQHALSAELYNMVKGRA ARE+ISWLDE+VIPKHG DVSLVV+V
Sbjct: 481 GGPSFKFSTEDDGEKSEQHALSAELYNMVKGRAPARELISWLDESVIPKHGLDVSLVVVV 540

Query: 243 QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM 302
           QTLLDIGSKSFTHLITVLERYGQVISRIC DQDKQVLLISEV SYWKNNTQMTAIAIDRM
Sbjct: 541 QTLLDIGSKSFTHLITVLERYGQVISRICHDQDKQVLLISEVGSYWKNNTQMTAIAIDRM 600

Query: 303 MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV 362
           MGYRLISNL+I++WIFSPEN++ YHTSDRPWEILRNALCKTYNRISDLRKEISSLKKD+V
Sbjct: 601 MGYRLISNLSIVKWIFSPENLQLYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDVV 660

Query: 363 AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRFE 403
           AAEEA A+TQ+EL+AAESKL+LVDGEPV+GENPVRLKR +
Sbjct: 661 AAEEAAARTQEELSAAESKLSLVDGEPVLGENPVRLKRLK 700

[Close]

BLAST of Carg25434 vs. TAIR 10
Match: AT2G13540.1 (ARM repeat superfamily protein )

HSP 1 Score: 632.5 bits (1630), Expect = 2.4e-181
Identity = 295/398 (74.12%), Postives = 353/398 (88.69%), Query Frame = 0


Query: 5   IQDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLMLPQ 64
           ++D+QPIDRFVVEEYLLDVL + NGCRKECAS+M  LPV FRYEYLMAET+FSQ+L+LPQ
Sbjct: 302 MEDVQPIDRFVVEEYLLDVLFYLNGCRKECASYMANLPVTFRYEYLMAETLFSQILLLPQ 361

Query: 65  PPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLSNF 124
           PPFK +YYTLVI+DLCKALPGAFPAVVAGAVRALFEKI+DLDME R RLILWFSHHLSNF
Sbjct: 362 PPFKTLYYTLVIMDLCKALPGAFPAVVAGAVRALFEKISDLDMESRTRLILWFSHHLSNF 421

Query: 125 QFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSIENAPGLEELLPPKGG 184
           QFIWPWEEWA+VL+LPKWAP+RVFV+E+L REVRLSYWDKIKQSIENA  LEELLPPK G
Sbjct: 422 QFIWPWEEWAFVLDLPKWAPKRVFVQEILQREVRLSYWDKIKQSIENATALEELLPPKAG 481

Query: 185 PNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLDETVIPKHGFDVSLVVIVQT 244
           PNF +S E+  EK E+  LSAEL   VK +  AR++I W++ET+ P HGF+V+L ++VQT
Sbjct: 482 PNFMYSLEEGKEKTEEQQLSAELSRKVKEKQTARDMIVWIEETIYPVHGFEVTLTIVVQT 541

Query: 245 LLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRMMG 304
           LLDIGSKSFTHL+TVLERYGQV S++CPD DKQV+L+S+VS+YWKNN QMTA+AIDRMMG
Sbjct: 542 LLDIGSKSFTHLVTVLERYGQVFSKLCPDNDKQVMLLSQVSTYWKNNVQMTAVAIDRMMG 601

Query: 305 YRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIVAA 364
           YRL+SN AI+RW+FSPEN++Q+H SD+PWEIL NAL KTYNRISDLRK+IS++ K+++ A
Sbjct: 602 YRLVSNQAIVRWVFSPENVDQFHVSDQPWEILGNALNKTYNRISDLRKDISNITKNVLVA 661

Query: 365 EEAVAKTQDELNAAESKLALVDGEPVMGENPVRLKRFE 403
           E+A A  + EL AAESKL+LV+GEPV+GENP ++KR +
Sbjct: 662 EKASANARVELEAAESKLSLVEGEPVLGENPAKMKRLK 699

The following BLAST results are available for this feature:

BLAST of Carg25434 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022099.1	6.1e-232	100.00	Nuclear cap-binding protein subunit 1 [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG6588203.1	2.9e-226	98.75	Nuclear cap-binding protein subunit 1, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022931611.1	2.9e-226	98.75	nuclear cap-binding protein subunit 1-like [Cucurbita moschata]	[more]
XP_023530943.1	8.6e-226	98.50	nuclear cap-binding protein subunit 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004357.1	3.3e-225	98.00	nuclear cap-binding protein subunit 1-like [Cucurbita maxima]	[more]

BLAST of Carg25434 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIU2	3.3e-180	74.12	Nuclear cap-binding protein subunit 1 OS=Arabidopsis thaliana OX=3702 GN=ABH1 PE...	[more]
Q10LJ0	2.9e-168	70.03	Nuclear cap-binding protein subunit 1 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q55D17	1.3e-51	30.99	Nuclear cap-binding protein subunit 1 OS=Dictyostelium discoideum OX=44689 GN=nc...	[more]
B4GW22	9.4e-50	29.43	Nuclear cap-binding protein subunit 1 OS=Drosophila persimilis OX=7234 GN=Cbp80 ...	[more]
Q29G82	9.4e-50	29.43	Nuclear cap-binding protein subunit 1 OS=Drosophila pseudoobscura pseudoobscura ...	[more]

BLAST of Carg25434 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EU52	1.4e-226	98.75	nuclear cap-binding protein subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KQ76	1.6e-225	98.00	nuclear cap-binding protein subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5D3DWR2	1.3e-216	92.75	Nuclear cap-binding protein subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BQ48	1.3e-216	92.75	nuclear cap-binding protein subunit 1 OS=Cucumis melo OX=3656 GN=LOC103492007 PE...	[more]
A0A0A0M082	5.1e-216	92.50	MIF4G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G616300 PE=3 ...	[more]

BLAST of Carg25434 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G13540.1	2.4e-181	74.12	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 347..388
IPR016021	MIF4G-like domain superfamily	GENE3D	1.25.40.180		coord: 193..383 e-value: 1.7E-44 score: 154.3
IPR016021	MIF4G-like domain superfamily	GENE3D	1.25.40.180		coord: 2..183 e-value: 7.6E-73 score: 246.1
IPR015174	MIF4G-like, type 2	PFAM	PF09090	MIF4G_like_2	coord: 188..382 e-value: 3.3E-34 score: 118.6
IPR015172	MIF4G-like, type 1	PFAM	PF09088	MIF4G_like	coord: 46..169 e-value: 1.6E-38 score: 132.4
IPR027159	Nuclear cap-binding protein subunit 1	PANTHER	PTHR12412	CAP BINDING PROTEIN	coord: 4..379
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 6..180
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 184..378

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25434-RA	Carg25434-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045292	mRNA cis splicing, via spliceosome
biological_process	GO:0051028	mRNA transport
biological_process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process	GO:0016070	RNA metabolic process
cellular_component	GO:0005845	mRNA cap binding complex
cellular_component	GO:0005846	nuclear cap binding complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0000339	RNA cap binding