Carg25426 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25426
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function (DUF803)
Location	Carg_Chr11: 4336388 .. 4337109 (+)
RNA-Seq Expression	Carg25426
Synteny	Carg25426

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTTGGTGAAGACAATCTGAATGGCGTTATTTTGGCTTTGCTCTCAAGTGGGTTCATTGGGGCAAGCTTTATTATCAAGAAAAAGGGGCTTAGAAGAGCAGCAGCAGCATCTGGGGTCAGAGCTGGTGAAGATTTTCATTATGAATGCACTTGATTTAGGCTTTTTTCTTTGTTGATTCTTCTGGGGCTTGTTTTGATTCAGATGGCCTTGTTTTTGTTCTTCGTTTTGCAGGTGTTGGTGGCTATACTTACCTCTTGGAGCCTCTATGGTGGATAGGCATGATTATAAGTAAGATATTCTTTCTTCCTCTCAAGGGGCTTCGATTGTTTTGCATTTAAGTTGTTCATATAATCATGGATTCTTACATGTTTTCTTATCTTGATTCTTGACTATGTTGAAATTGTGCTCCGTGTTCATGGATGAACTTAAATTTGGCTGATTCTTGCTTCAAAGTTCTAGTAATCTGCTGGACATGATTCATTTGCCCCTTTTGAATTCCATATTTGATCAATGTTCATATTGTCTGTAATCCAGTGATTGTTGGTGAGGCTGCCAACTTCATTGCTTATGCATTTGCCCCTGCAGTTCTCGTGACGCCGCTCGGTGCGTTAAGCATAATCGTCAGGTATTTCGTGTCTGCTATGCTTGCTCTTTCTCAATTATGTTTAGAAGTTATCTCCATGTTAGCTATCAGAGTTTTCTCTGATGTCCTCTGA

mRNA sequence

ATGGGTTTTGGTGAAGACAATCTGAATGGCGTTATTTTGGCTTTGCTCTCAAGTGGGTTCATTGGGGCAAGCTTTATTATCAAGAAAAAGGGGCTTAGAAGAGCAGCAGCAGCATCTGGGGTCAGAGCTGGTGTTGGTGGCTATACTTACCTCTTGGAGCCTCTATGGTGGATAGGCATGATTATAATGATTGTTGGTGAGGCTGCCAACTTCATTGCTTATGCATTTGCCCCTGCAGTTCTCGTGACGCCGCTCGGTGCGTTAAGCATAATCGTCAGGTATTTCGTGTCTGCTATGCTTGCTCTTTCTCAATTATGTTTAGAAGTTATCTCCATGTTAGCTATCAGAGTTTTCTCTGATGTCCTCTGA

Coding sequence (CDS)

ATGGGTTTTGGTGAAGACAATCTGAATGGCGTTATTTTGGCTTTGCTCTCAAGTGGGTTCATTGGGGCAAGCTTTATTATCAAGAAAAAGGGGCTTAGAAGAGCAGCAGCAGCATCTGGGGTCAGAGCTGGTGTTGGTGGCTATACTTACCTCTTGGAGCCTCTATGGTGGATAGGCATGATTATAATGATTGTTGGTGAGGCTGCCAACTTCATTGCTTATGCATTTGCCCCTGCAGTTCTCGTGACGCCGCTCGGTGCGTTAAGCATAATCGTCAGGTATTTCGTGTCTGCTATGCTTGCTCTTTCTCAATTATGTTTAGAAGTTATCTCCATGTTAGCTATCAGAGTTTTCTCTGATGTCCTCTGA

Protein sequence

MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMIIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLALSQLCLEVISMLAIRVFSDVL

Homology

[Close]

BLAST of Carg25426 vs. NCBI nr
Match: KAG7022107.1 (putative magnesium transporter NIPA3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223.4 bits (568), Expect = 1.1e-54
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLALSQLCLEVISMLAIRVFSD 120
           IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLALSQLCLEVISMLAIRVFSD
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLALSQLCLEVISMLAIRVFSD 120

Query: 121 VL 123
           VL
Sbjct: 121 VL 122

[Close]

BLAST of Carg25426 vs. NCBI nr
Match: XP_022928581.1 (probable magnesium transporter NIPA6 isoform X1 [Cucurbita moschata] >XP_023530894.1 probable magnesium transporter NIPA6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174.1 bits (440), Expect = 7.4e-40
Identity = 96/101 (95.05%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. NCBI nr
Match: XP_023004403.1 (probable magnesium transporter NIPA6 isoform X1 [Cucurbita maxima])

HSP 1 Score: 174.1 bits (440), Expect = 7.4e-40
Identity = 96/101 (95.05%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. NCBI nr
Match: XP_008450363.1 (PREDICTED: probable magnesium transporter NIPA6 isoform X1 [Cucumis melo])

HSP 1 Score: 169.5 bits (428), Expect = 1.8e-38
Identity = 94/101 (93.07%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGF EDNL GVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFSEDNLTGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. NCBI nr
Match: XP_008450364.1 (PREDICTED: probable magnesium transporter NIPA6 isoform X2 [Cucumis melo])

HSP 1 Score: 169.5 bits (428), Expect = 1.8e-38
Identity = 94/101 (93.07%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGF EDNL GVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFSEDNLTGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. ExPASy Swiss-Prot
Match: Q9LNK7 (Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana OX=3702 GN=At1g34470 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-30
Identity = 69/91 (75.82%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 2   GFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMI 61
           G   DN+ G++LAL SS FIGASFI+KKKGL+R A ASG+RAG GGY+YLLEPLWW+GMI
Sbjct: 14  GMSSDNIKGLVLALSSSLFIGASFIVKKKGLKR-AGASGLRAGSGGYSYLLEPLWWVGMI 73

Query: 62  IMIVGEAANFIAYAFAPAVLVTPLGALSIIV 93
            MIVGE ANF AYAFAPA+LVTPLGALSII+
Sbjct: 74  TMIVGEIANFAAYAFAPAILVTPLGALSIII 103

[Close]

BLAST of Carg25426 vs. ExPASy Swiss-Prot
Match: F4JKQ7 (Probable magnesium transporter NIPA5 OS=Arabidopsis thaliana OX=3702 GN=At4g09640 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.5e-30
Identity = 69/91 (75.82%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 2   GFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMI 61
           G   DN+ G++LAL SS FIGASFI+KKKGL++ A ASG+RAG GGY+YLLEPLWWIGMI
Sbjct: 14  GMSSDNVKGLVLALSSSIFIGASFIVKKKGLKK-AGASGLRAGSGGYSYLLEPLWWIGMI 73

Query: 62  IMIVGEAANFIAYAFAPAVLVTPLGALSIIV 93
            MIVGE ANF AYAFAPA+LVTPLGALSII+
Sbjct: 74  TMIVGEIANFAAYAFAPAILVTPLGALSIII 103

[Close]

BLAST of Carg25426 vs. ExPASy Swiss-Prot
Match: Q94AH3 (Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana OX=3702 GN=At1g71900 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.0e-28
Identity = 68/100 (68.00%), Postives = 83/100 (83.00%), Query Frame = 0


Query: 2   GFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMI 61
           G   DN+ G++LAL SS FIGASFI+KKKGL++ AA++G RAGVGGY+YL EPLWWIGM 
Sbjct: 14  GMSSDNIKGLVLALSSSLFIGASFIVKKKGLKK-AASTGTRAGVGGYSYLYEPLWWIGMT 73

Query: 62  IMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
            M++GE ANF AYAFAPA+LVTPLGA+SII    +SA+LA
Sbjct: 74  TMLLGEIANFAAYAFAPAILVTPLGAVSII----ISAVLA 108

[Close]

BLAST of Carg25426 vs. ExPASy Swiss-Prot
Match: Q8GWX2 (Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana OX=3702 GN=At2g21120 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.0e-28
Identity = 70/96 (72.92%), Postives = 80/96 (83.33%), Query Frame = 0


Query: 6   DNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMIIMIV 65
           DN  G+ILA+ SS FIG+SFI+KKKGL+RA A  G RAG GGYTYLLEPLWW GM+ MIV
Sbjct: 4   DNGKGLILAVASSVFIGSSFILKKKGLKRAGAI-GTRAGYGGYTYLLEPLWWAGMVTMIV 63

Query: 66  GEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           GEAANF+AY +APAVLVTPLGALSII    +SA+LA
Sbjct: 64  GEAANFVAYIYAPAVLVTPLGALSII----ISAVLA 94

[Close]

BLAST of Carg25426 vs. ExPASy Swiss-Prot
Match: Q9LIR9 (Probable magnesium transporter NIPA1 OS=Arabidopsis thaliana OX=3702 GN=At3g23870 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.2e-28
Identity = 72/96 (75.00%), Postives = 79/96 (82.29%), Query Frame = 0


Query: 6   DNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMIIMIV 65
           DN+NGVILA+ SS FIG+SFIIKKKGL++ A ASGVRAG GGY YL EP WW GMI MIV
Sbjct: 7   DNINGVILAVSSSIFIGSSFIIKKKGLKK-AGASGVRAGEGGYGYLKEPWWWAGMITMIV 66

Query: 66  GEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           GE ANF AYAFAPA+LVTPLGALSII     SA+LA
Sbjct: 67  GEVANFAAYAFAPAILVTPLGALSII----FSAVLA 97

[Close]

BLAST of Carg25426 vs. ExPASy TrEMBL
Match: A0A6J1KZE1 (Probable magnesium transporter OS=Cucurbita maxima OX=3661 GN=LOC111497731 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.6e-40
Identity = 96/101 (95.05%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. ExPASy TrEMBL
Match: A0A6J1EKP2 (Probable magnesium transporter OS=Cucurbita moschata OX=3662 GN=LOC111435368 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.6e-40
Identity = 96/101 (95.05%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. ExPASy TrEMBL
Match: A0A5D3DVA4 (Probable magnesium transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00580 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 8.8e-39
Identity = 94/101 (93.07%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGF EDNL GVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFSEDNLTGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. ExPASy TrEMBL
Match: A0A1S3BP41 (Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103491991 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 8.8e-39
Identity = 94/101 (93.07%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGF EDNL GVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFSEDNLTGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. ExPASy TrEMBL
Match: A0A1S3BP20 (Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103491991 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 8.8e-39
Identity = 94/101 (93.07%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MGFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60
           MGF EDNL GVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM
Sbjct: 1   MGFSEDNLTGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGM 60

Query: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           IIMIVGEAANFIAYAFAPAVLVTPLGALSII    VSA+LA
Sbjct: 61  IIMIVGEAANFIAYAFAPAVLVTPLGALSII----VSAVLA 97

[Close]

BLAST of Carg25426 vs. TAIR 10
Match: AT1G34470.1 (Protein of unknown function (DUF803) )

HSP 1 Score: 134.0 bits (336), Expect = 7.9e-32
Identity = 69/91 (75.82%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 2   GFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMI 61
           G   DN+ G++LAL SS FIGASFI+KKKGL+R A ASG+RAG GGY+YLLEPLWW+GMI
Sbjct: 14  GMSSDNIKGLVLALSSSLFIGASFIVKKKGLKR-AGASGLRAGSGGYSYLLEPLWWVGMI 73

Query: 62  IMIVGEAANFIAYAFAPAVLVTPLGALSIIV 93
            MIVGE ANF AYAFAPA+LVTPLGALSII+
Sbjct: 74  TMIVGEIANFAAYAFAPAILVTPLGALSIII 103

[Close]

BLAST of Carg25426 vs. TAIR 10
Match: AT4G09640.1 (Protein of unknown function (DUF803) )

HSP 1 Score: 132.9 bits (333), Expect = 1.8e-31
Identity = 69/91 (75.82%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 2   GFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMI 61
           G   DN+ G++LAL SS FIGASFI+KKKGL++ A ASG+RAG GGY+YLLEPLWWIGMI
Sbjct: 14  GMSSDNVKGLVLALSSSIFIGASFIVKKKGLKK-AGASGLRAGSGGYSYLLEPLWWIGMI 73

Query: 62  IMIVGEAANFIAYAFAPAVLVTPLGALSIIV 93
            MIVGE ANF AYAFAPA+LVTPLGALSII+
Sbjct: 74  TMIVGEIANFAAYAFAPAILVTPLGALSIII 103

[Close]

BLAST of Carg25426 vs. TAIR 10
Match: AT1G71900.1 (Protein of unknown function (DUF803) )

HSP 1 Score: 127.5 bits (319), Expect = 7.4e-30
Identity = 68/100 (68.00%), Postives = 83/100 (83.00%), Query Frame = 0


Query: 2   GFGEDNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMI 61
           G   DN+ G++LAL SS FIGASFI+KKKGL++ AA++G RAGVGGY+YL EPLWWIGM 
Sbjct: 14  GMSSDNIKGLVLALSSSLFIGASFIVKKKGLKK-AASTGTRAGVGGYSYLYEPLWWIGMT 73

Query: 62  IMIVGEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
            M++GE ANF AYAFAPA+LVTPLGA+SII    +SA+LA
Sbjct: 74  TMLLGEIANFAAYAFAPAILVTPLGAVSII----ISAVLA 108

[Close]

BLAST of Carg25426 vs. TAIR 10
Match: AT2G21120.1 (Protein of unknown function (DUF803) )

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-29
Identity = 70/96 (72.92%), Postives = 80/96 (83.33%), Query Frame = 0


Query: 6   DNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMIIMIV 65
           DN  G+ILA+ SS FIG+SFI+KKKGL+RA A  G RAG GGYTYLLEPLWW GM+ MIV
Sbjct: 4   DNGKGLILAVASSVFIGSSFILKKKGLKRAGAI-GTRAGYGGYTYLLEPLWWAGMVTMIV 63

Query: 66  GEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           GEAANF+AY +APAVLVTPLGALSII    +SA+LA
Sbjct: 64  GEAANFVAYIYAPAVLVTPLGALSII----ISAVLA 94

[Close]

BLAST of Carg25426 vs. TAIR 10
Match: AT3G23870.1 (Protein of unknown function (DUF803) )

HSP 1 Score: 125.2 bits (313), Expect = 3.7e-29
Identity = 72/96 (75.00%), Postives = 79/96 (82.29%), Query Frame = 0


Query: 6   DNLNGVILALLSSGFIGASFIIKKKGLRRAAAASGVRAGVGGYTYLLEPLWWIGMIIMIV 65
           DN+NGVILA+ SS FIG+SFIIKKKGL++ A ASGVRAG GGY YL EP WW GMI MIV
Sbjct: 7   DNINGVILAVSSSIFIGSSFIIKKKGLKK-AGASGVRAGEGGYGYLKEPWWWAGMITMIV 66

Query: 66  GEAANFIAYAFAPAVLVTPLGALSIIVRYFVSAMLA 102
           GE ANF AYAFAPA+LVTPLGALSII     SA+LA
Sbjct: 67  GEVANFAAYAFAPAILVTPLGALSII----FSAVLA 97

The following BLAST results are available for this feature:

BLAST of Carg25426 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022107.1	1.1e-54	100.00	putative magnesium transporter NIPA3, partial [Cucurbita argyrosperma subsp. arg...	[more]
XP_022928581.1	7.4e-40	95.05	probable magnesium transporter NIPA6 isoform X1 [Cucurbita moschata] >XP_0235308...	[more]
XP_023004403.1	7.4e-40	95.05	probable magnesium transporter NIPA6 isoform X1 [Cucurbita maxima]	[more]
XP_008450363.1	1.8e-38	93.07	PREDICTED: probable magnesium transporter NIPA6 isoform X1 [Cucumis melo]	[more]
XP_008450364.1	1.8e-38	93.07	PREDICTED: probable magnesium transporter NIPA6 isoform X2 [Cucumis melo]	[more]

BLAST of Carg25426 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNK7	1.1e-30	75.82	Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana OX=3702 GN=At1g3447...	[more]
F4JKQ7	2.5e-30	75.82	Probable magnesium transporter NIPA5 OS=Arabidopsis thaliana OX=3702 GN=At4g0964...	[more]
Q94AH3	1.0e-28	68.00	Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana OX=3702 GN=At1g7190...	[more]
Q8GWX2	3.0e-28	72.92	Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana OX=3702 GN=At2g2112...	[more]
Q9LIR9	5.2e-28	75.00	Probable magnesium transporter NIPA1 OS=Arabidopsis thaliana OX=3702 GN=At3g2387...	[more]

BLAST of Carg25426 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KZE1	3.6e-40	95.05	Probable magnesium transporter OS=Cucurbita maxima OX=3661 GN=LOC111497731 PE=3 ...	[more]
A0A6J1EKP2	3.6e-40	95.05	Probable magnesium transporter OS=Cucurbita moschata OX=3662 GN=LOC111435368 PE=...	[more]
A0A5D3DVA4	8.8e-39	93.07	Probable magnesium transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BP41	8.8e-39	93.07	Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103491991 PE=3 SV=1	[more]
A0A1S3BP20	8.8e-39	93.07	Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103491991 PE=3 SV=1	[more]

BLAST of Carg25426 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G34470.1	7.9e-32	75.82	Protein of unknown function (DUF803)	[more]
AT4G09640.1	1.8e-31	75.82	Protein of unknown function (DUF803)	[more]
AT1G71900.1	7.4e-30	68.00	Protein of unknown function (DUF803)	[more]
AT2G21120.1	2.2e-29	72.92	Protein of unknown function (DUF803)	[more]
AT3G23870.1	3.7e-29	75.00	Protein of unknown function (DUF803)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008521	Magnesium transporter NIPA	PFAM	PF05653	Mg_trans_NIPA	coord: 6..104 e-value: 3.2E-39 score: 134.8
IPR008521	Magnesium transporter NIPA	PANTHER	PTHR12570	UNCHARACTERIZED	coord: 2..102
None	No IPR available	PANTHER	PTHR12570:SF57	MAGNESIUM TRANSPORTER-RELATED	coord: 2..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25426-RA	Carg25426-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1903830	magnesium ion transmembrane transport
biological_process	GO:0015693	magnesium ion transport
cellular_component	GO:0005769	early endosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0015095	magnesium ion transmembrane transporter activity