Carg25419 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25419
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
Location	Carg_Chr11: 4374593 .. 4384246 (+)
RNA-Seq Expression	Carg25419
Synteny	Carg25419

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAATTCTCTCTCTCCATGTCTTCATGCCATTTCCACCACCCACCGCCACCGCTCCTCCGCCGTCAATCTCATCTTCTCCAACGGCGTCACAAAATCCCTCACCGGAAACCACCACATCGCCGGCGAGATCATGTTCCAATTCCCGGACATGATGATATGCCACGCTGATTCCTTCTTCATCGGCCACCCGATTCCCTCCTTAGCCATCGACGACCAACTCCTTGCGGGCGAAACCTATTTCGTTCTCCCGATTGACTTATTCGCTTCCTTCGACGTTCTCTCAACGTCGTCGCTCGCATCAATTGGAGCGAGAAATGCTAAATTCTCCGGTCAAAGTCCATTTGAATACATTCGAGGCACGAATGGAAGAATTGTCATTAAGATCGTACCGGAGTTTCTTGTTCGGCTTATTTCTCCCGCAGCGGGTGAGGGCGGCGGAGGTAATTTTCTTTGTAGCACGCCGGAGTTGCAGAAGCATTACGATCAGCTCGTCGGGTCGACGAAAGGGCAAGTTTGGTCGCCGAAGTTGGAGAGTATTTCTGAGTATAAAATTAGGTATTCGCCTTGTAAATTTGTAGGGTTTAAAGTCAAACAAAAAGAAGGGTAATCAAACCAAACCCTAATTGATTCAATTCATACCCACAAAGCTGAATGAAGCATATTTGAGCTTCACAACGCTTGCCAGCTCTTAAGAACACATCAAAGTTTCAATTTTTAGTGGAAGTTCGAGATTGTTTATCTTCAATTGTGTTCGTTTGTTACGAGTTGAATTGACAGTCTTCATCTTTCCCGAACGGGTTAAGAAGCTTACCGGGAACATTCCTAGTTTTCGAAATGTCTATGTAAGTTTTTTTTTTTCGGGCATAAGCTCAACCAAATATGAGGAACAATGATTCTAATTTTTTTTCTCATGTATATTGTAAGTGTGACGTTCGAATAAATGAGAGGTATATAAATGAACCGTGATCACAACCAAATGAGTGTGACCCGAGTAAATGAAAATATGGTTAAGAAATGCTTAAAAGAATTAATAGTTACTACATATACGAACCAGATGCATATTTCTTTTCAGTGACTCAACTATAAGAACTCGAAAGTTGAGCGTGTTTGGAATGAAACAATTTCTATTGGGTGATTTCTCGGAATCTTTTTTCAGAAACATGTCAGTGAGACAAAAAAAAAAACATAGTACAAGAATCTGTGTTGACATGTGGAAAAAGTCTTCACTCTCAGAAGTAGTTTAAGACATAGATAACATGGTCACATCACATAGCCGAATCATGATTCTAAATCCAAGTAAGAAAAATATCTTCAAATGGTCCTGTGAGGTTTCACATCGGTTGGAGAGGGGAACAAAACATTCTTTATAAGGGCATAAAAACTTCTCCCTAGCCGACACGTTTTATACCCATGAGTCTGGCGGCGATACGTAGTAGGCTAAAACAGACTATATTTGCTAGCAGTGGCCTCAGTGTCATAGGTACTAACCCTAGTTTATTGGCAATTTTTTTTTTCATGGCTCGATAGATAATTTGATAAGCCCATTATTTTTTTTCCGTGTTTCAAAATACGGTTAATTGACGTGCTTAATCTAACATAGTTTAACTATTGAAGTAACGCTCAAGTTAATAGGTAATTTTATTTCTATTTCTTAATTCTCGGGTAAAATTTCAATAACGTTGACGGGATTATAAACTTAGGGCTAGTTGAACCAATTGAGTTGACTTGTGAATAGGCCAAATCTTATCACTTATAATTAATCAAAGAAGGGAGATACTTGTTCAAGCTTTTGTGGTTTATATTCAATGATTTGGTTGAAAGCTTCAGCTCATAGTTCCCTTTTTGACAAGCAATTTACATCACACAACTCAAAATTTCTATGCATCCCATCACTCTAAACCTAATATTTTGTATAAAAGTCTTCGCAACTTTTAAGGTTGTTTGAAAATTTGTTCGGTTTTTGTTTTTTCAGAATAGGGAACAAAATATTCTTTATAACAGTGTGAAAACCTCTCTCTAGTAGATGTATTTTGAAATCATGAAGCTGACGACGATATGTAACGGGCCAAAATGGACAATATCTACTAATGGTAGACTTGGTCTGTTACAGAAAGTCCGTCAAAAGTAAAAGTTCAAAGTATGAAAAGCAAACTCAACAAGGTCAGCTGAACATGAGCGGTCGACTACCATGAACGTCGATTAGGGTTGAGGTTGACTCTAGATGGGGTTGTGTGGTTTATATTCTGAATTATCTACTTATAACTTTTAAATAAAATTTGTCATATTCTCAAACTAAAATTTTAAACTTTCAATCATCTTTATTTATATTAAAAAAAATAATTTGCAAATTAAATCATATAAAAATTTAAAGAATTAATTTAAAATAAAATAGATGTTAAATATTTATATAAAAGTAATTGAAATAATAGCGTGGAAACTTCTACTTAATAAACCCGTTTTAAAACCGTAAGGCTGAAAATGATACGTAATCTTTAACTTTCGAAGGCATTTTCAAGAGATCTCTACTAGTAAATCTTAAAAACTCGGATGTGTTCTGAGGTTCGATTCGTATCCTTTCCAAGCTAAAATTTTCTCTGATAAGCTACTAAAATTCGAGACGATCACGATCACCTTTAGATGATTTACTTGAATTTGATCCGTCAAAACAAATTATTATTATTTTTCTTCAATTTGATCCTCCAAATAAAAAATGTCAACCATCCCTTTGAAAATTTTAAGGTTTCTTGGGAAGCTCAATTTTTACCATTAACATACCCTACTTCATCAATATCAAAATTACACAATATTCTAATTCAATAAAAAAAAAAAATTGACCTGAATTAGTAAAGACCATAATAAGTTTGACCCACAAAGTCAAAACCCTAAAACAACAGAATTCATTGAATACCTAGGTCCACTGCTAGCAAATATTGTCCTCTCTGAGATTTCCCTTTCGAGCTTTAAAATGCGTCTATTAGAGAAGGTTTCCACATCCTTATAAATGGTGTTTTGTTGTACTTCGCAACCAATGTGGGACATCGCAATTTTTTAGGTCATCGAATTTTTTTAACACCCCTACATGCTTTATTTTTTCATTTAAATGGATTATGTCCACTTTGAGCTTTCCCTTTCGAGCTTTAAAACGGGTCTACTAGAGAAGGTTTCCACTAGGGTGTTTTGTTCTCCTCCCCAACCAATGTGGCTCCGTACTCAATAGTTATATGCAGTAAACCAGTTGTATTTTGCTTACATTTCCATCTAACACCAATTTCAATTTCTCAACTCTTACTTTCAAAACTCTCTTTCGAAATCTCTCTGTCCTGTTTTCTAAAACTTTCTTCTTGAATCAGGGCTAGAGGCTCGAGCATACGTCGCTGGGCCGTAGGTGACACAATAACGAATAGACTTAACTCAGTTGCTGCTAAGAAGTGACACAAGAACGAATAGGCTTAACTCACTTGCTGTTGAGAAGTGACACAAGAACGAATAGGCTTAACTCACTTGCTGTTGAGAAGTGACACAAAAACGAATAGGCTTAACTCACTTGCTGTTGAGAAGTGACGCAAGAACGAATAGACTTAACTCACTTGCTGCTGAGAAGTGAGTGCCACACAATCGCAAGTCCACTGCCATCAAAGTGCGATTGTGACAAGACATCACAATTTTTTAGGTCATCGAATCTTTTGAACACACCTACTTTATTTTTTCACTTAAATTATGTCTTATTTGGATTAAGGTTTTTGTTTTGTTTTGTTTTTGTTTTTAACTCATTTTGATTGATTCAAATCACCCCAAATTAATTGCCCTAATATAGGTTTAAAATAATGATTACAACCATTAAAATTAAAGGAAAAAGAAAGTAAAATTTTTTATATAACAAATGTAAGAAAAAGACTCCCATCCACTAAAACTCAACTAAATCCCTCTTATAAATGAAGCTCCTTTCCCATCCTCCAAATCAATCCATCTATCCCAACAAGCACAAGCACACCACAAGAGAAAAAATGGCAAAATCCTTTGCTATCATTCTTTTTGCCCTTTGCTTCCTCTCGACCCTCGACGTTTCTGTCTCTAAAAAGGATCACTTTGTCATCGAGGGCAAGGTTTACTGTGACACGTGCCGAATCCAATTCTTCACCCGTGTTAGCAAATGGATGCATGGTAACATAGTTCCTTTGTTCGTTCCTTCAGTATCTTATGTTCAAACTCCTGTAATGTCATTTCTTTATAATGTATCATGTATCAGGAGCTAAGGTGAAGTTGGTATGCCGCGAGGAGGAAGGAGGAAGCGAGACGTTAGCCGTCGAGGCTGAGACCGGGAAGAACGGAGAGTACACGATCAAGGTGGATGGCGACCATGAGGAGGAGGTTTGTGAAGTGAATTTGGTGAAGAGTAGTGATGATGACTGTGCTGAGATTCCCACCGATGGGTTTGGGCATAGGGCGAGAGTGAGCATCACGGCCAACGATGGCATCACGAACCCTGTGCGTCAAGCTAACCCACTTGGGTTCATGAAGAAGGAGACACTTCCCCAATGCAAGGAGGTTCTTCGTGAGCTTGGGTTCGATGAGGCTGGTCTTCCCGTTTGAAGCTAAGCCACAAAGGGCCTTTCTTGGTTAAGCACATGCATGGTTATAGCATATATGCTTTAATGTTGAAATCGATGAGGTAGTTGCTTAAGAGTTTATTTTTTCTTAGTAATTCAAAATGAATTTAGGTTATGATTTAATCATGAATAAATCGATCATTAAAGCATTAATGATACTTGGCTCGGGGTCTATAGCTCAGTTGGTGAGCTTTGTTCTTGCCATTGAGTCGCTTTGATTATGGGTTGGATGTCTAATTGTTCATGCGATAATGATAATATCTTGTATTTGAACCGATGGCTCACTTTTGCTCACTTTTCCTAAGAAAGAGAGGAGGTCTATATTAGGGTTCCCCCGTCTCGGAAGCATAAGACCTAGCATAATTGAAGCTATAAAGGTTTTTTAGTGGCTCATAGAAATATTAAAATAATGACGTCTGCGCAAGTGATTACAGTGACCTAGCCTAATTATTCAAATTGTAAATTTTTTCGAATAAATAAAAAAATAATTATGAAATTAAATACAAATTTATTTATTTGAATTTATGAACCACCTCATTTAAATTTTCATTTATTTGAACTTAACGATATTAAGAACCTTTTCAACATCAATGGTAATAATTGGATAAACAGCTCGTTGATAGAGGTAAATTAATAAGACCCCATGTAAAAAGTTTTCCATATGGCTTAAGAAATTTAAAAAAAAAAATTAATTCATGATTACAATATTTATATATTCTTACGTACTTTAACATATATTATTTTTATGTGAATTCTGACAATACAAGAGAGAACCCTTCCTCTAATTTTTTTTTTTTTATTTGAATCTCTAATTATTATTATTTGTTTTTGAATTTTGATTTAATGTGTCTCGAAATCTCTAATTATTTTTTTTAATATATCGATATTAAAAAAAATGATAATAACAATTACTATTTGTATAAAAAAATAAAAAATAAACTAGCCCTTTTTTCTAAATTAAAAAAAGTAATTACTATATTATATAATCTAAATTTAAAAAAAAAGTAATTATTATATTATATAAAAATAGAAAATAACTAAAAAAAATCTTCTTTTTTTTTATTATTATCTCTCTTCATTATCTTTTATCTAAGATATATAATTATTTACCTAATAAAATCTATAAATATTTCTCCCACCCTACATAAATTTATATATAAAAATATATGTCACAATCACACCTTTGATGGTAGCGGACTTGCGACTTTGCTGCACTCATTTTCCAACAACAATTGAGCTAAGTCAATTCGTTCTTACGCCTACGGCCAAACGACGTATGCTCGAACCTCTGACTTCGGTTTAAGAAGAAGATTTTAGAAAACGAGAATAGATAGAGATTTTCGAAGGAGAGATTTTGAGAAAGTGTTATATATGCAAGAAGTAACAAGTACTACTCAGTATATAATTGTATTGAGAAAGTGTTATATATGCAAGAAGTAACAAGTACTACTCAGTATATAATTGTATTGTAGTGAATATTGTCCGGTGGTAAGAATGATTACATTAGCTTAGAAGTTAAAGCATCACATTTGTATTCGGATAGCAGACTTTTCTTTATTTATTTGATTTTAACTTTCTATTATGAATAAAAATGGAGAGATTCTATTTTTATAGAACAAATCAAGAAAGTAACAAGCCAGAATTGGATTTCATATTCGAATGAACTCGTAAAAAACATAGCTATTTTTAGGTTTAGTAAACACGAAAGCTGAAAAAAGGACTCCCATCCACAAAAACTCAACCAACTCCCAAAGAAACAACCAAATTAGTCCTATAAGAGACCTCCTTTCCCATCATTCAAATCACTCTCACATTCACATTTACATTCAGAATTCTCCATCTATCTATCCCAACAACCACAATGGCAAAATCCTTTGCTATCATCCTTCTTTCTGCCCTTTTCTTCCTCTCCATCCTCCACGTCTCCGTCTCGAAAAAAGATCACTTTGTCGTCGAGGGCAAGGTTTATTGTGACACGTGCCGCATCCAATTCTTCACCCGTGTCAGCAAATGGATGCATGGTAACACAATTCCTTTGTTCGTTCCTTCTATATCTTAGGTTCAAACTCCTGTAATGTCATTTGTTTATGATGTATCATGTATCAGGAGCTAAGGTGAAGTTGGTATGCCGCGAAGAGGAAGGAGGAAGTGAGACGTTAGCCGTCGAGGCTGAGACCGGGAAGAACGGAGAGTACACGATCAAGGTGGACGGCGACCATGAGGAGGAGGTTTGTGAAGTGAATTTGGTGAAGAGTAGTGATGATGACTGTGCTGAGGTTCCCACCGATGGATTTGGGCATAGGGCGAGAGTGAGCATCACGGCCAACGATGGCATCACGAACCCTATGCGTCAAGCTAACCCACTTGGGTTCATGAAGAAGGAGACTCTTCCCCAATGCAAAGAGGTTCTTCGTGAGCTTGGGTTCGATGAGGCTGGTCTTCCAGTTTGAAGCTAAGCCACCACAAAGGGCCTTCCTTGGTCAACCACATGCATTCTTATAGCATATAAAAGCACTTTTTTTTTTTTTAAATGAATAATTTTAAAGACCATTGATGTCAAATAAATTGTTGAATGAAATTTTTTTATACCTCGATTCGACTATTAATACGCTTTGCTTTCACTTTCGATTTGGTATTATGCTTGATTTGTTGCTCGAATCAGAGCTAATTCATTCTCAAAATGGGTTGAGGTGCAACAATTGACTAGACATCTAAAACATCTAGGGAGTTTAGGGTGATTGTTCCTGGGTCGATGCCCGAGCAGTTAATGGGGACGAACGGTAAATTCGTTGGCAATATTGTCTACGCTGGTTTAAATCCAGCTCGGCTCAATAATTTGGGGATCCACCATAAATTGATATAACCCATTTGTCCTTGGACAGAAATGCTTGATATGAAAGAATAAAAAAAACTCTTTTTTTATTGATATAACCCATTTGTCCGTGCATATCAATCTATTACTTGCGTCTTGTCGGGTAAAATATGACAATTCGAATAAAAAAACATATTTGAATGAAATTAAATCAACAACCTATGTTGTACACTTTATTTCCCCGGGAAGCTACGGGTTTGAGTCCCGAAAGTGAGCATAGTACCAAATCAAGCATGCAAGCAAATGATTTTACTTCTAACCACAACTCATCCATTGATTCTTCAATATCATTTGGACCTCCACTTAATTTCTCCAAAACTTCATCTTGGTCATGGATAGATCCCGGGGAACAATGTGGAAATTGTGAGGCTTGTGAGGTTGGAGAGGGGAACAGTGTGTGAGATCCCACATCGGTTGGAGAGGGGAAGATCCCACATCGGTTGGAGAGGGGAACAGTGTGGAAATTGTGAGGCTAACGATGATAGCTAGTAGGCTAGAGCGGACAATCAGAAGTCTCCCACGAGGGATGTGTCGAGGTTCTCGCGGTTCTCGCTAACCATGAACGTGTTCTCCCTTTGCTTATGTGAGTCTAACCCGCCTTTGACTCCCTTTTCTTATGTGAGTTTGACTTGCCTTTGACTCCGCTTGCTTCTAACTCCGTGAGACGTTTAACGACCTAGTAAGCGTGAGTCATCAGCTCGCGTTGACTACGTCTCTACCCTTTGTACACATCGTCCGTCTCTCCTACCAATTGAATAGTCTGGTGAAGTGTTCGAATCATGGCGACATGGGGCGGCTCGCTGCCTGCGACGTCACGAGAAGTCCACTAAACCTTATCATTTAGAGAAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAATGATCATTTTCGATGCCTAAACATCAAACGACATATGACTTCTTTGAAGGGTTGGTCCTCAGCTCATGCATGGTTTACCGAAAGAACCAATACTATCCCACTTCTTTCTATTAAACAAGGCTACCCCAAAATACAAAAGTTGTTGAAATTAAAAATGCAAAAAGTTAGGTCTAGATTAATTATGGATGGAGACATTTAAAAGTTTTAAGGGTAAATCATATTTTAAGGTTAAAAAAATAGTTAAAAAAATAGGTATTTTGGGACCACTTTTCGAAAGTTTTAAAATAAAGTATTAATTGAATCAGATATTTAAAAAGTTACTCTAAAAATTTAAGAATACTATTAAAACTCGTAATAATTTTAAAATATATATATATTTTTTTACATAAAATATACATTTTATTAATTTAGCCTAATAAATAAATATTTAATGTCCAAATTTATGGATTTTACTTATAATTAACCTTTTTATATATATAGATATATATTATAAATAATAATAATGGATATAAATATAGATAATTAAGGCTCCAAATAAACAAAAACCTAAAAAAAAACAATTTCACCAATTTTAAAATCAAGCGATATAAAATCCCCTTTTTCTCTCTCTCTCTCCTCCTCCGTCTTCCCCATTCTAAATCCTCTCTTTTCTCTCTCTAATTCCAATGGGCAATGCCGCCGCCTCTCCATGTTATGTATCAATTTCCGTCTCCCGCCGCCGCTCCTCCGCCGTCAAACTCGTCTTCTCCGACGGCTTTACTAGACTCCTCCCCGGTAAGCACCACATGGCCGGTGAAATCATGTTCCGATTCCCAAACACGATGATCTGTCACGCCGATTCCTTCTTCATCGGTCACACCATCCCCTCCTTAGGCACCGACGACAAACTCATCGCCGGCGAGACCTACTTCATCCTCCCGCTCGATCTATTCGCCTCCTTCGACGTTCTCACCACATCGTCGCTCGCAGCCCTCGGCGCTCAAAAGGCGAAGACCGTGAAATTTTCCGGTCCTTGTCCGTTTGAGTATGTTCGAAACGCAAATGGAAGAGTTCTGATTAAGGTCGCGCCGGAGTTCATTCTTCGCCTAATTTCCCCGGCGGACGACGGCGGAGGAGGTCAATTTCTGTGCAGTACGCCGGAGTTGAAGAAACATTACGATCAACTCGTCGGATCGAAGGGCCCGGTTTGGTCCCCCAAATTGGAGAGCATTTCGGAGTATGAAATTAGGCATTCACCCTATAAATTTGTAGGGTTTAAACTCAAACAAAAAGAAGGCTAA

mRNA sequence

ATGGGAAATTCTCTCTCTCCATGTCTTCATGCCATTTCCACCACCCACCGCCACCGCTCCTCCGCCGTCAATCTCATCTTCTCCAACGGCGTCACAAAATCCCTCACCGGAAACCACCACATCGCCGGCGAGATCATGTTCCAATTCCCGGACATGATGATATGCCACGCTGATTCCTTCTTCATCGGCCACCCGATTCCCTCCTTAGCCATCGACGACCAACTCCTTGCGGGCGAAACCTATTTCGTTCTCCCGATTGACTTATTCGCTTCCTTCGACGTTCTCTCAACGTCGTCGCTCGCATCAATTGGAGCGAGAAATGCTAAATTCTCCGGTCAAAGTCCATTTGAATACATTCGAGGCACGAATGGAAGAATTGTCATTAAGATCGTACCGGAGTTTCTTGTTCGGCTTATTTCTCCCGCAGCGGGTGAGGGCGGCGGAGGTAATTTTCTTTGTAGCACGCCGGAGTTGCAGAAGCATTACGATCAGCTCGTCGGGTCGACGAAAGGGCAAGTTTGGTCGCCGAAGTTGGAGAGTATTTCTGAGTATAAAATTAGGTATTCGCCTTGTAAATTTGTAGGGTTTAAAGTCAAACAAAAAGAAGGACTCCTCCCCGGTAAGCACCACATGGCCGGTGAAATCATGTTCCGATTCCCAAACACGATGATCTGTCACGCCGATTCCTTCTTCATCGGTCACACCATCCCCTCCTTAGGCACCGACGACAAACTCATCGCCGGCGAGACCTACTTCATCCTCCCGCTCGATCTATTCGCCTCCTTCGACGTTCTCACCACATCGTCGCTCGCAGCCCTCGGCGCTCAAAAGGCGAAGACCGTGAAATTTTCCGGTCCTTGTCCGTTTGAGTATGTTCGAAACGCAAATGGAAGAGTTCTGATTAAGGTCGCGCCGGAGTTCATTCTTCGCCTAATTTCCCCGGCGGACGACGGCGGAGGAGGTCAATTTCTGTGCAGTACGCCGGAGTTGAAGAAACATTACGATCAACTCGTCGGATCGAAGGGCCCGGTTTGGTCCCCCAAATTGGAGAGCATTTCGGAGTATGAAATTAGGCATTCACCCTATAAATTTGTAGGGTTTAAACTCAAACAAAAAGAAGGCTAA

Coding sequence (CDS)

ATGGGAAATTCTCTCTCTCCATGTCTTCATGCCATTTCCACCACCCACCGCCACCGCTCCTCCGCCGTCAATCTCATCTTCTCCAACGGCGTCACAAAATCCCTCACCGGAAACCACCACATCGCCGGCGAGATCATGTTCCAATTCCCGGACATGATGATATGCCACGCTGATTCCTTCTTCATCGGCCACCCGATTCCCTCCTTAGCCATCGACGACCAACTCCTTGCGGGCGAAACCTATTTCGTTCTCCCGATTGACTTATTCGCTTCCTTCGACGTTCTCTCAACGTCGTCGCTCGCATCAATTGGAGCGAGAAATGCTAAATTCTCCGGTCAAAGTCCATTTGAATACATTCGAGGCACGAATGGAAGAATTGTCATTAAGATCGTACCGGAGTTTCTTGTTCGGCTTATTTCTCCCGCAGCGGGTGAGGGCGGCGGAGGTAATTTTCTTTGTAGCACGCCGGAGTTGCAGAAGCATTACGATCAGCTCGTCGGGTCGACGAAAGGGCAAGTTTGGTCGCCGAAGTTGGAGAGTATTTCTGAGTATAAAATTAGGTATTCGCCTTGTAAATTTGTAGGGTTTAAAGTCAAACAAAAAGAAGGACTCCTCCCCGGTAAGCACCACATGGCCGGTGAAATCATGTTCCGATTCCCAAACACGATGATCTGTCACGCCGATTCCTTCTTCATCGGTCACACCATCCCCTCCTTAGGCACCGACGACAAACTCATCGCCGGCGAGACCTACTTCATCCTCCCGCTCGATCTATTCGCCTCCTTCGACGTTCTCACCACATCGTCGCTCGCAGCCCTCGGCGCTCAAAAGGCGAAGACCGTGAAATTTTCCGGTCCTTGTCCGTTTGAGTATGTTCGAAACGCAAATGGAAGAGTTCTGATTAAGGTCGCGCCGGAGTTCATTCTTCGCCTAATTTCCCCGGCGGACGACGGCGGAGGAGGTCAATTTCTGTGCAGTACGCCGGAGTTGAAGAAACATTACGATCAACTCGTCGGATCGAAGGGCCCGGTTTGGTCCCCCAAATTGGAGAGCATTTCGGAGTATGAAATTAGGCATTCACCCTATAAATTTGTAGGGTTTAAACTCAAACAAAAAGAAGGCTAA

Protein sequence

MGNSLSPCLHAISTTHRHRSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGARNAKFSGQSPFEYIRGTNGRIVIKIVPEFLVRLISPAAGEGGGGNFLCSTPELQKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCKFVGFKVKQKEGLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFKLKQKEG

Homology

[Close]

BLAST of Carg25419 vs. NCBI nr
Match: KAG7022114.1 (hypothetical protein SDJN02_15843, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 769.2 bits (1985), Expect = 1.6e-218
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0


Query: 1   MGNSLSPCLHAISTTHRHRSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSF 60
           MGNSLSPCLHAISTTHRHRSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSF
Sbjct: 1   MGNSLSPCLHAISTTHRHRSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSF 60

Query: 61  FIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGARNAKFSGQSPFEYIR 120
           FIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGARNAKFSGQSPFEYIR
Sbjct: 61  FIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGARNAKFSGQSPFEYIR 120

Query: 121 GTNGRIVIKIVPEFLVRLISPAAGEGGGGNFLCSTPELQKHYDQLVGSTKGQVWSPKLES 180
           GTNGRIVIKIVPEFLVRLISPAAGEGGGGNFLCSTPELQKHYDQLVGSTKGQVWSPKLES
Sbjct: 121 GTNGRIVIKIVPEFLVRLISPAAGEGGGGNFLCSTPELQKHYDQLVGSTKGQVWSPKLES 180

Query: 181 ISEYKIRYSPCKFVGFKVKQKEGLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLG 240
           ISEYKIRYSPCKFVGFKVKQKEGLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLG
Sbjct: 181 ISEYKIRYSPCKFVGFKVKQKEGLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLG 240

Query: 241 TDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFEYVRNANGRVL 300
           TDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFEYVRNANGRVL
Sbjct: 241 TDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFEYVRNANGRVL 300

Query: 301 IKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHS 360
           IKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHS
Sbjct: 301 IKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHS 360

Query: 361 PYKFVGFKLKQKEG 375
           PYKFVGFKLKQKEG
Sbjct: 361 PYKFVGFKLKQKEG 374

[Close]

BLAST of Carg25419 vs. NCBI nr
Match: XP_022927424.1 (uncharacterized protein LOC111434251 [Cucurbita moschata])

HSP 1 Score: 404.1 bits (1037), Expect = 1.3e-108
Identity = 199/203 (98.03%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 1   MGNSLSPCLHAISTTHRHRSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSF 60
           MGNSLSPCLHAISTT R  SSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSF
Sbjct: 1   MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSF 60

Query: 61  FIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGARNAKFSGQSPFEYIR 120
           FIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGA NAKFSGQSPFEYIR
Sbjct: 61  FIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGAGNAKFSGQSPFEYIR 120

Query: 121 GTNGRIVIKIVPEFLVRLISPAAGEGGGGNFLCSTPELQKHYDQLVGSTKGQVWSPKLES 180
           GTNGRIVIKIVPEFLVRLISPAAGEGGGGNFLCSTPELQKHYDQLVGSTKGQVWSPKLES
Sbjct: 121 GTNGRIVIKIVPEFLVRLISPAAGEGGGGNFLCSTPELQKHYDQLVGSTKGQVWSPKLES 180

Query: 181 ISEYKIRYSPCKFVGFKVKQKEG 204
           ISEYKIRYSPCKFVGFKVKQKEG
Sbjct: 181 ISEYKIRYSPCKFVGFKVKQKEG 203

[Close]

BLAST of Carg25419 vs. NCBI nr
Match: XP_023530355.1 (uncharacterized protein LOC111792953 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 401.7 bits (1031), Expect = 6.7e-108
Identity = 197/203 (97.04%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 1   MGNSLSPCLHAISTTHRHRSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSF 60
           MGNSLSPCLHAISTT R RSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSF
Sbjct: 1   MGNSLSPCLHAISTTGRRRSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSF 60

Query: 61  FIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGARNAKFSGQSPFEYIR 120
           FIGHPIPSLAIDDQL+AGETYFV+PIDLFASFDVLSTSSLASIGA NAKFSGQSPFEYIR
Sbjct: 61  FIGHPIPSLAIDDQLVAGETYFVIPIDLFASFDVLSTSSLASIGAGNAKFSGQSPFEYIR 120

Query: 121 GTNGRIVIKIVPEFLVRLISPAAGEGGGGNFLCSTPELQKHYDQLVGSTKGQVWSPKLES 180
           GTNGRIVIKIVPEFLVRLISPAAGE GGGNFLCSTPELQKHYDQLVGSTKGQVWSPKLES
Sbjct: 121 GTNGRIVIKIVPEFLVRLISPAAGESGGGNFLCSTPELQKHYDQLVGSTKGQVWSPKLES 180

Query: 181 ISEYKIRYSPCKFVGFKVKQKEG 204
           ISEYKIRYSPCKFVGFKVKQKEG
Sbjct: 181 ISEYKIRYSPCKFVGFKVKQKEG 203

[Close]

BLAST of Carg25419 vs. NCBI nr
Match: KAG6588215.1 (hypothetical protein SDJN03_16780, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 399.4 bits (1025), Expect = 3.3e-107
Identity = 199/203 (98.03%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 1   MGNSLSPCLHAISTTHRHRSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSF 60
           MGNSLSPCLHAISTT R RSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSF
Sbjct: 1   MGNSLSPCLHAISTTSR-RSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSF 60

Query: 61  FIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGARNAKFSGQSPFEYIR 120
           FIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGA NAKFSGQSPFEYIR
Sbjct: 61  FIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGAGNAKFSGQSPFEYIR 120

Query: 121 GTNGRIVIKIVPEFLVRLISPAAGEGGGGNFLCSTPELQKHYDQLVGSTKGQVWSPKLES 180
           GTNGRIVIKIVPEFLVRLISPAAGEG GGNFLCSTPELQKHYDQLVGSTKGQVWSPKLES
Sbjct: 121 GTNGRIVIKIVPEFLVRLISPAAGEGSGGNFLCSTPELQKHYDQLVGSTKGQVWSPKLES 180

Query: 181 ISEYKIRYSPCKFVGFKVKQKEG 204
           ISEYKIRYSPCKFVGFKVKQKEG
Sbjct: 181 ISEYKIRYSPCKFVGFKVKQKEG 202

[Close]

BLAST of Carg25419 vs. NCBI nr
Match: XP_022927436.1 (uncharacterized protein LOC111434260 [Cucurbita moschata] >KAG7022128.1 hypothetical protein SDJN02_15857, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 360.9 bits (925), Expect = 1.3e-95
Identity = 182/203 (89.66%), Postives = 183/203 (90.15%), Query Frame = 0


Query: 175 SPKLESISEYKIRYSPCKFV---GFKVKQKEGLLPGKHHMAGEIMFRFPNTMICHADSFF 234
           SP   SIS  + R S  K V   GF       LLPGKHHMAGEIMFRFPNTMICHADSFF
Sbjct: 7   SPCYVSISVSRRRSSAVKLVFSDGF-----TRLLPGKHHMAGEIMFRFPNTMICHADSFF 66

Query: 235 IGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFEY 294
           IGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFEY
Sbjct: 67  IGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFEY 126

Query: 295 VRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLES 354
           VRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLES
Sbjct: 127 VRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLES 186

Query: 355 ISEYEIRHSPYKFVGFKLKQKEG 375
           ISEYEIRHSPYKFVGFKLKQKEG
Sbjct: 187 ISEYEIRHSPYKFVGFKLKQKEG 204

[Close]

BLAST of Carg25419 vs. ExPASy TrEMBL
Match: A0A6J1EHY7 (uncharacterized protein LOC111434251 OS=Cucurbita moschata OX=3662 GN=LOC111434251 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 6.5e-109
Identity = 199/203 (98.03%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 1   MGNSLSPCLHAISTTHRHRSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSF 60
           MGNSLSPCLHAISTT R  SSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSF
Sbjct: 1   MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSF 60

Query: 61  FIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGARNAKFSGQSPFEYIR 120
           FIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGA NAKFSGQSPFEYIR
Sbjct: 61  FIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGAGNAKFSGQSPFEYIR 120

Query: 121 GTNGRIVIKIVPEFLVRLISPAAGEGGGGNFLCSTPELQKHYDQLVGSTKGQVWSPKLES 180
           GTNGRIVIKIVPEFLVRLISPAAGEGGGGNFLCSTPELQKHYDQLVGSTKGQVWSPKLES
Sbjct: 121 GTNGRIVIKIVPEFLVRLISPAAGEGGGGNFLCSTPELQKHYDQLVGSTKGQVWSPKLES 180

Query: 181 ISEYKIRYSPCKFVGFKVKQKEG 204
           ISEYKIRYSPCKFVGFKVKQKEG
Sbjct: 181 ISEYKIRYSPCKFVGFKVKQKEG 203

[Close]

BLAST of Carg25419 vs. ExPASy TrEMBL
Match: A0A6J1EHN5 (uncharacterized protein LOC111434260 OS=Cucurbita moschata OX=3662 GN=LOC111434260 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 6.3e-96
Identity = 182/203 (89.66%), Postives = 183/203 (90.15%), Query Frame = 0


Query: 175 SPKLESISEYKIRYSPCKFV---GFKVKQKEGLLPGKHHMAGEIMFRFPNTMICHADSFF 234
           SP   SIS  + R S  K V   GF       LLPGKHHMAGEIMFRFPNTMICHADSFF
Sbjct: 7   SPCYVSISVSRRRSSAVKLVFSDGF-----TRLLPGKHHMAGEIMFRFPNTMICHADSFF 66

Query: 235 IGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFEY 294
           IGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFEY
Sbjct: 67  IGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFEY 126

Query: 295 VRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLES 354
           VRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLES
Sbjct: 127 VRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLES 186

Query: 355 ISEYEIRHSPYKFVGFKLKQKEG 375
           ISEYEIRHSPYKFVGFKLKQKEG
Sbjct: 187 ISEYEIRHSPYKFVGFKLKQKEG 204

[Close]

BLAST of Carg25419 vs. ExPASy TrEMBL
Match: A0A6J1KR03 (uncharacterized protein LOC111496859 OS=Cucurbita maxima OX=3661 GN=LOC111496859 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 6.1e-91
Identity = 175/205 (85.37%), Postives = 180/205 (87.80%), Query Frame = 0


Query: 175 SPKLESISEYKIRYSPCKFV---GFKVKQKEGLLPGKHHMAGEIMFRFPNTMICHADSFF 234
           SP   SIS  + R S  K V   GF       LLPGKHHMAGEIMFRFPNTMICHADSFF
Sbjct: 7   SPCYVSISVSRRRSSAVKLVFSDGF-----TRLLPGKHHMAGEIMFRFPNTMICHADSFF 66

Query: 235 IGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFEY 294
           IGHT+PSLGTDDKLI GETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFEY
Sbjct: 67  IGHTLPSLGTDDKLIPGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFEY 126

Query: 295 VRNANGRVLIKVAPEFILRLISPA--DDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKL 354
           VRNANGRVLIKVAPEFILRLISPA  D  GGGQFLCSTPELKKHYDQLVG+KGPVW+PKL
Sbjct: 127 VRNANGRVLIKVAPEFILRLISPAVSDGSGGGQFLCSTPELKKHYDQLVGTKGPVWAPKL 186

Query: 355 ESISEYEIRHSPYKFVGFKLKQKEG 375
           ESISEY+IRHSPYKFVGFKLKQKEG
Sbjct: 187 ESISEYKIRHSPYKFVGFKLKQKEG 206

[Close]

BLAST of Carg25419 vs. ExPASy TrEMBL
Match: A0A5A7UN34 (DUF4228 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00360 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 2.0e-86
Identity = 163/212 (76.89%), Postives = 184/212 (86.79%), Query Frame = 0


Query: 1   MGNSLSPCLHAIS-TTHRHRSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADS 60
           MGN++SPCL +IS +  RHR SAV L+F++G TK L GNHH AGEIMFQFPDMM+CHA+S
Sbjct: 1   MGNAVSPCLISISISLRRHRPSAVKLVFTDGPTKFLVGNHHFAGEIMFQFPDMMVCHAES 60

Query: 61  FFIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGARN---AKFSGQSPF 120
           FFIGHPIPSL+IDD+LL GETY VLPID FAS DVLSTSSLA IGA N    KFSG  PF
Sbjct: 61  FFIGHPIPSLSIDDELLVGETYLVLPIDRFASVDVLSTSSLAMIGAGNMSAEKFSGPCPF 120

Query: 121 EYIRGTNGRIVIKIVPEFLVRLISPAA---GE--GGGGNFLCSTPELQKHYDQLVGSTKG 180
           EY+RGTNGR++IK++PEF+VRLISPAA   GE  GGGG FLCSTPEL+KHYDQLVGSTKG
Sbjct: 121 EYVRGTNGRVLIKVMPEFIVRLISPAAMDGGESGGGGGGFLCSTPELKKHYDQLVGSTKG 180

Query: 181 QVWSPKLESISEYKIRYSPCKFVGFKVKQKEG 204
           QVWSPKLE+ISEYKIRYSPC+FVGFK+KQKEG
Sbjct: 181 QVWSPKLETISEYKIRYSPCRFVGFKLKQKEG 212

[Close]

BLAST of Carg25419 vs. ExPASy TrEMBL
Match: A0A1S3BP11 (uncharacterized protein LOC103491983 OS=Cucumis melo OX=3656 GN=LOC103491983 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 2.0e-86
Identity = 163/212 (76.89%), Postives = 184/212 (86.79%), Query Frame = 0


Query: 1   MGNSLSPCLHAIS-TTHRHRSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADS 60
           MGN++SPCL +IS +  RHR SAV L+F++G TK L GNHH AGEIMFQFPDMM+CHA+S
Sbjct: 1   MGNAVSPCLISISISLRRHRPSAVKLVFTDGPTKFLVGNHHFAGEIMFQFPDMMVCHAES 60

Query: 61  FFIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGARN---AKFSGQSPF 120
           FFIGHPIPSL+IDD+LL GETY VLPID FAS DVLSTSSLA IGA N    KFSG  PF
Sbjct: 61  FFIGHPIPSLSIDDELLVGETYLVLPIDRFASVDVLSTSSLAMIGAGNMSAEKFSGPCPF 120

Query: 121 EYIRGTNGRIVIKIVPEFLVRLISPAA---GE--GGGGNFLCSTPELQKHYDQLVGSTKG 180
           EY+RGTNGR++IK++PEF+VRLISPAA   GE  GGGG FLCSTPEL+KHYDQLVGSTKG
Sbjct: 121 EYVRGTNGRVLIKVMPEFIVRLISPAAVDGGESGGGGGGFLCSTPELKKHYDQLVGSTKG 180

Query: 181 QVWSPKLESISEYKIRYSPCKFVGFKVKQKEG 204
           QVWSPKLE+ISEYKIRYSPC+FVGFK+KQKEG
Sbjct: 181 QVWSPKLETISEYKIRYSPCRFVGFKLKQKEG 212

[Close]

BLAST of Carg25419 vs. TAIR 10
Match: AT5G12340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 174.1 bits (440), Expect = 2.1e-43
Identity = 102/224 (45.54%), Postives = 138/224 (61.61%), Query Frame = 0


Query: 1   MGNSL-SPCLHAISTTHRHRSSAVNLIFSNGV-TKSLTG-NHHIAGEIMFQFPDMMICHA 60
           MG SL + C   I    R R   V L+F   V TK+L G   H+AGEIMF+FPD ++CHA
Sbjct: 1   MGRSLINSCFPII----RRRQGIVTLVFFEHVSTKTLCGFKKHVAGEIMFEFPDQIVCHA 60

Query: 61  DSFFIGHPIPSLAIDDQLLAGETYFVLPIDLFASFDVLSTSSLASIGA--RNAKF----- 120
           DSF+IG  IP+LA+DD L+ G+TYFVLPI+ F  + +L+TS L+   +   N +      
Sbjct: 61  DSFYIGRQIPALAMDDYLIPGQTYFVLPIERF-QYKILTTSCLSIFNSNLENVRSNTPPL 120

Query: 121 -----SGQSPFEYIRGTNGRIVIKIVPEFLVRLI-------SPAAGEGGGGNFLCSTPEL 180
                S   PFEY +G NG+I+IK+ PEF++ LI          A   G  + +C++PEL
Sbjct: 121 NFTAPSSPPPFEYSQGPNGKILIKVSPEFIISLICKNRNIREEEATSCGENSAICNSPEL 180

Query: 181 QKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCKFVGFKVKQKE 203
           +K YDQLVG T+  +WSP L++ISE+KIR SP +F G   KQ E
Sbjct: 181 KKQYDQLVG-TREHMWSPNLQTISEHKIRVSPLRFFGLNRKQDE 218

[Close]

BLAST of Carg25419 vs. TAIR 10
Match: AT1G28190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12340.1); Has 166 Blast hits to 162 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 15; Fungi - 5; Plants - 124; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). )

HSP 1 Score: 72.8 bits (177), Expect = 6.6e-13
Identity = 52/163 (31.90%), Postives = 77/163 (47.24%), Query Frame = 0


Query: 41  IAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGETYFVLPIDLF---ASFDVLST 100
           +  E+   FP   IC +D  +IG   P L+  + L  G  YF+LP D F    SF  ++T
Sbjct: 56  VVSELTKDFPKHKICRSDLLYIGQKTPVLSETETLKLGLNYFLLPSDFFKNDLSFLTIAT 115

Query: 101 SSLASIGARNAKFSGQSPFEYI--RGTNG-RIVIKIVPEFLVRLI------------SPA 160
                 G    K + Q P  ++  +G  G R+ I++  EF+  L+               
Sbjct: 116 LKTPQNGGVLVKKTQQQPQPFLIQKGEKGERLRIRVSEEFVSELMMEGKKNRVNEEEEEE 175

Query: 161 AGEGGGGNFLCSTPELQKHYDQLVGSTKGQVWSPKLESISEYK 186
            G G G   +C+T +L+K Y QLVG  +   W PKLE+I+E K
Sbjct: 176 EGGGEGEGRVCTTVKLKKDYVQLVGLRR---WKPKLETITETK 215

[Close]

BLAST of Carg25419 vs. TAIR 10
Match: AT1G21010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76600.1); Has 206 Blast hits to 206 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 4.3e-04
Identity = 35/155 (22.58%), Postives = 69/155 (44.52%), Query Frame = 0


Query: 224 ICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKF 283
           IC +DS +    IP++ +++ L A + YF+LP+    S   LT S +AAL  + +  ++ 
Sbjct: 61  ICDSDSLYYDDFIPAIKSEEPLQADQIYFVLPISKRQS--RLTASDMAALAVKASVAIQN 120

Query: 284 SGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQ--------FLCSTPELKKHYD 343
           S        + +  R  ++++P  +L   + + +G G +        F+  T  +K    
Sbjct: 121 S------VKKESRRRKKVRISPVMMLTGSNDSVNGNGSETTVKKGRPFVSKTAPVK---- 180

Query: 344 QLVGSKGPVWSPKLESISEYEIRHSPYKFVGFKLK 371
               S G   S  + ++  Y  + +      F+LK
Sbjct: 181 ---ASSGINRSGSVRNLRRYTSKRAKLAVRSFRLK 200

[Close]

BLAST of Carg25419 vs. TAIR 10
Match: AT5G01390.1 (DNAJ heat shock family protein )

HSP 1 Score: 43.1 bits (100), Expect = 5.6e-04
Identity = 38/124 (30.65%), Postives = 52/124 (41.94%), Query Frame = 0


Query: 177 KLESISE-YKIRYSPCKFVGFKVKQKEGLLPGKHHMAG---------EIMFRFPNTMICH 236
           K + ISE Y +   P K   ++   +EGL       AG            FRF       
Sbjct: 46  KFKQISEAYDVLSDPQKRAIYEQYGEEGLNQAPPPGAGGGYPGGSDAGASFRFNPRSADD 105

Query: 237 ADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGP 291
             S F G T PS GT     AG + F    D+FASF   TT   A++ ++K+  ++   P
Sbjct: 106 IFSEFFGFTRPSFGTGSDSRAGPSGFRYGDDIFASFRAATTGGEASIPSRKSAPIERQLP 165

[Close]

BLAST of Carg25419 vs. TAIR 10
Match: AT5G01390.4 (DNAJ heat shock family protein )

HSP 1 Score: 43.1 bits (100), Expect = 5.6e-04
Identity = 38/124 (30.65%), Postives = 52/124 (41.94%), Query Frame = 0


Query: 177 KLESISE-YKIRYSPCKFVGFKVKQKEGLLPGKHHMAG---------EIMFRFPNTMICH 236
           K + ISE Y +   P K   ++   +EGL       AG            FRF       
Sbjct: 46  KFKQISEAYDVLSDPQKRAIYEQYGEEGLNQAPPPGAGGGYPGGSDAGASFRFNPRSADD 105

Query: 237 ADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGP 291
             S F G T PS GT     AG + F    D+FASF   TT   A++ ++K+  ++   P
Sbjct: 106 IFSEFFGFTRPSFGTGSDSRAGPSGFRYGDDIFASFRAATTGGEASIPSRKSAPIERQLP 165

The following BLAST results are available for this feature:

BLAST of Carg25419 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022114.1	1.6e-218	100.00	hypothetical protein SDJN02_15843, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022927424.1	1.3e-108	98.03	uncharacterized protein LOC111434251 [Cucurbita moschata]	[more]
XP_023530355.1	6.7e-108	97.04	uncharacterized protein LOC111792953 [Cucurbita pepo subsp. pepo]	[more]
KAG6588215.1	3.3e-107	98.03	hypothetical protein SDJN03_16780, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022927436.1	1.3e-95	89.66	uncharacterized protein LOC111434260 [Cucurbita moschata] >KAG7022128.1 hypothet...	[more]

BLAST of Carg25419 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg25419 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHY7	6.5e-109	98.03	uncharacterized protein LOC111434251 OS=Cucurbita moschata OX=3662 GN=LOC1114342...	[more]
A0A6J1EHN5	6.3e-96	89.66	uncharacterized protein LOC111434260 OS=Cucurbita moschata OX=3662 GN=LOC1114342...	[more]
A0A6J1KR03	6.1e-91	85.37	uncharacterized protein LOC111496859 OS=Cucurbita maxima OX=3661 GN=LOC111496859...	[more]
A0A5A7UN34	2.0e-86	76.89	DUF4228 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3BP11	2.0e-86	76.89	uncharacterized protein LOC103491983 OS=Cucumis melo OX=3656 GN=LOC103491983 PE=...	[more]

BLAST of Carg25419 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12340.1	2.1e-43	45.54	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G28190.1	6.6e-13	31.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G21010.1	4.3e-04	22.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G01390.1	5.6e-04	30.65	DNAJ heat shock family protein	[more]
AT5G01390.4	5.6e-04	30.65	DNAJ heat shock family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 374..374
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..189
None	No IPR available	PANTHER	PTHR33052:SF4	DUF4228 DOMAIN PROTEIN	coord: 1..189 coord: 204..359
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 204..359
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 211..354 e-value: 3.3E-19 score: 70.0 coord: 1..183 e-value: 1.7E-25 score: 90.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25419-RA	Carg25419-RA	mRNA