Carg25382 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg25382
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr16: 5232313 .. 5235932 (+)
RNA-Seq ExpressionCarg25382
SyntenyCarg25382
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCCCTTCAACTTCTTCCATTTCTCTACTGCCAGCGATCGAGCGTTTCAATTTGTTGCGGAGGTTCTAGATACGGATAGTCAGACAATCGATATGAGCAGAAATTTGAGTCGCAGATCGTCTGATTTGGTTGCGCTTTCCGCTTCGCTTTCCCTACTTTTCGTCTCCGGTACTTCTTCAGATCTCTCTCTCTTTTTTTATTTTTTAATCTTTTGCTTTATTCGGTTTCTGCGATCTGTCTATTGATTTGTGCAATTTTTCCTTCTCTTTTCTTTGCTGATTCTGTTACTGGATGCTCTTGATGTGAATCGAATGACTGGGGGATGCAATTGACTGTTTTTCATGAATTCTGTGTTGAGATCTTGTTTTTGTTTGATTTTTAGTATCCTTCCCTGTTAATTAGTTGAACATGTCCTTCGGAATCTTTGTTTCTTTATGCTTTCTCAGTTAAATTAGTACTTTCAGAACTTCATAATCTGTTTATATGAAAGTTTGTGGCTGTAATCAGTTAATTTCAATTTCGCAATGTGTAAGCGAGACAAGCAGTTGCACGAAATACTAGTACTACTTAATCTGTGTTTTTTTAAAGGAAATCTCGATATTGTCATAAAAAATAACTTCTTGTACATTCTTTCTTTGAAGTTTATGGAGGTACAAAAAGTGTGTACCATAAAGCAGCCATAAAATTTGTTCATTCAATAGCTACGCACTGTTTTTCTCATTGCCAATGAAATGAGGAGTTTCGGTTCATCTCTGCTTTCGATGTTTATTTCCTTAAACCCGTACTCAAATTTCATTATTTATTATTTTCCTTTTCTATGCTTTTTTGGGCAAAGGAGATGCAAGTATGCTGTAGTGTATTGGTATTTTACCTGTGTAGATTCCAAACCCCATGGTTACTTTTTCGTTTTGTGCATTTTCCATTATCTTTTATCTAGAAATGAATTTTTTTTGTCGAATGATAAATGACCAGTCATCAATTAGTACATGTTGAGTCATTAATTTTTACTTTTGCAGCTATCTCTTAACACTTCTTTTGGTTGGCTACTACAGCCCTTTCTAATGATTCCAGTGGCAAAGATAGTATTAACTCCGGGAAGCATTCATCCTCAAGCAGCAAAACTGGCTCTATGGTTGCCATCATCCTCCTTGGGTTTTTGGTAGTTGTGTTATTATCATTTTTCCTTTTCAAGCTATGGCAGAAGAAGAGAAGAGAGGAGCAATATGCCCGACTTCTGAAATTGTTTGAAGAAGATGATGAGCTTGAGGTCGAACTTGGTCTTCGGGATTGAAGAATATCTGAAATTCTAGTTCACTGAAGCTGGGTATGTCCTTGATCTCGTCATCCTTTTATTTCTTACCTGAAATAGCTTACTTCATATTGATATGCTGGTGTGGTATGTCATGTCTATTAGATGATCTGGTTGCCCATGACGAATAGAATATGAACAAACTATATTCAATGGCATATGTATGCTTCTATCCATGGCTGCATGACCAGTAGTTACTTTTCTTATTTAATTTGATTGATATTAATTTTCTTTGGAGAATTACAAAAGGGACTTTCCACTTGGCCAAAAGTATAGATATACATAGAGATAGAAAGAGGGCTTTGCACTTTCACCAATATGAAGCCAAAAAAGAACTGAATACAAAAAATTGTGAAAAGTATGCCTTTTATAGTTATTGCTGGCGTTTCATAGGAAAAAAAATGTTGGCATGTTTGTGCCAACAGGAATGCATAATGCTTATATATGTGCAGTTATATAGTTGATTGCTCAGTTTTGCATCTCCATTCCTTCATTTTGGAACCACTTTTACATCTTAAAAGGCTAAAAATACTTTTTAGGTATCGACTAACTCCTCCCTTTCCTGTTTTCTCATCGTCTCCCATTTTTATTCCTTCTTTGCCAGCCATTCTATTGCAAGCTTGACTCTCTCATCTTGACTTAAACTTACAATTTACTATTAAAACTCTTATATGGGAAGTGGAAAAGCCTGACGTGGTGTCTTAAAAAGTAAATAGATACCTTAGAGACTTAGCTGAAGCTGCTAGGTGGGGCGAGAGTAAGTTTCAAGTAATATTCATAAAAGGATATCTGTTTTGAGTGCATGTTTTCTATATAGGAAATATATTATTAATAGGAAAATTCGATAGATGGAGAGGCATCATGAAGCACTGCCAAGATCGTTACAAGACGTTCTATCAATTGGTACTACTAAAAAGAATCTAATTACAAAATAAATTGGAGAACTCCATGAGCAGCCATTTAATAAAAATTATGATCTCCCACACATTTTAGAAAAGATCATATGATTGCCTTCCGTCCATACTTTTTTCATAATTTAGCCGTAGCAACATTTTCCCATAAAAGTGTGGCATTTCATTTGAAAGGATATCGAGAAAGAGCTGTTCCATGGAAGAACAACCCTTGTAAACAGCAGAAAATACCAAATTCGATAAGAAGCTAATGGCAATAGTTTGTGCCATGAGGGTAGGAATAAAGAGTTAACTTCGACTCTCCTAATTCTTACTGCACAATGCCTTTGGAATGTGTTTGATGTGTTAACTAGACCCAAAGCTGGAGTTTACAGGAAAAGTATAACTTTCTTAGGGGCCTGTTTCCATAACTTCTCTGAGTAATGAAAGTATAGGATTCTGTTTCCTTTGGTACTTAGAGAAGGGCATTCATTTGTAAGCACATGAAGAAAACAGGTAACCCGGCAACAGGGTGTTAAAAATCTTCAACAAAAACCGTAGATATCCCCAAGATACATCTTTGAGCTTTAGTTGAGCTTGAGTGTGTTAGATCTTCGTTTTCAAAAATAGGGCATAAGTGTGCATGACTAGTAACGCGTCCATAGAAGATGATTTTGCAACAACATCTAGTCCAATTATTTAAGTTAAATTACAAGTTTGGTTCTAAAATTTGAGGTGTGTATCTATATGTTCTTTGAGCTTTAAAAGTATTTTAAAGCATGGAATACGTTCCTAAACTTTCAATTTTGTGTCTAATAGGTACTTGAACTTTCAATTTTGTGTGTAATAGGTCGCTCACAAATTTGAAAATTTTAAAAATTAATTGATCTATTTGATATAAATTTGAATTTTATGTCTAATAAAACTCTAAAATTTTAATTTTGTATTTAGTAAATATTTGAATTTTGAACCATTTGAAAATTCAAAAGCTTGTAAATGAACCAATTATTTACTTTCTCAGTGACTTTATGATTTAGTGTTCTGATTCTGGCTGTTGTACTGCTTGCTATAGATTTTTTAGATCTTTTAGACCTGATACATTAGCTTTTACGTGGTTCTTGCATCGCCATCGTTTCTTTTCGAGTCCGTCCCTCATTAGTTAGGCAGTATATATCATAGATTATTACAGCTCAAATGTTCAGGCACTTCTCTTGATTTTCCTTCTTTTCTGTGCAAAGTTGCATATAATTTTCGAACGTTCCCTGTTCGTAGATCTGAGAATCTCTCAATCGACCCGACACTCTGCTGGCTTTTTTCACAGGCTCAGAAACCATTATGTTGGAATTATTGCATTTCAAATGGCTAAAAGATGGTGAGATGATAGCTTGAGTTTGCTGTAAGGTTAGATTTTTTTTTTTTT

mRNA sequence

TTTCCCTTCAACTTCTTCCATTTCTCTACTGCCAGCGATCGAGCGTTTCAATTTGTTGCGGAGGTTCTAGATACGGATAGTCAGACAATCGATATGAGCAGAAATTTGAGTCGCAGATCGTCTGATTTGGTTGCGCTTTCCGCTTCGCTTTCCCTACTTTTCGTCTCCGCCCTTTCTAATGATTCCAGTGGCAAAGATAGTATTAACTCCGGGAAGCATTCATCCTCAAGCAGCAAAACTGGCTCTATGGTTGCCATCATCCTCCTTGGGTTTTTGGTAGTTGTGTTATTATCATTTTTCCTTTTCAAGCTATGGCAGAAGAAGAGAAGAGAGGAGCAATATGCCCGACTTCTGAAATTGTTTGAAGAAGATGATGAGCTTGAGGTCGAACTTGGTCTTCGGGATTGAAGAATATCTGAAATTCTAGTTCACTGAAGCTGGATCTGAGAATCTCTCAATCGACCCGACACTCTGCTGGCTTTTTTCACAGGCTCAGAAACCATTATGTTGGAATTATTGCATTTCAAATGGCTAAAAGATGGTGAGATGATAGCTTGAGTTTGCTGTAAGGTTAGATTTTTTTTTTTTT

Coding sequence (CDS)

TTTCCCTTCAACTTCTTCCATTTCTCTACTGCCAGCGATCGAGCGTTTCAATTTGTTGCGGAGGTTCTAGATACGGATAGTCAGACAATCGATATGAGCAGAAATTTGAGTCGCAGATCGTCTGATTTGGTTGCGCTTTCCGCTTCGCTTTCCCTACTTTTCGTCTCCGCCCTTTCTAATGATTCCAGTGGCAAAGATAGTATTAACTCCGGGAAGCATTCATCCTCAAGCAGCAAAACTGGCTCTATGGTTGCCATCATCCTCCTTGGGTTTTTGGTAGTTGTGTTATTATCATTTTTCCTTTTCAAGCTATGGCAGAAGAAGAGAAGAGAGGAGCAATATGCCCGACTTCTGAAATTGTTTGAAGAAGATGATGAGCTTGAGGTCGAACTTGGTCTTCGGGATTGA

Protein sequence

FPFNFFHFSTASDRAFQFVAEVLDTDSQTIDMSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Homology
[Close]
BLAST of Carg25382 vs. NCBI nr
Match: KAG7015450.1 (hypothetical protein SDJN02_23086, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 241.9 bits (616), Expect = 3.2e-60
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   FPFNFFHFSTASDRAFQFVAEVLDTDSQTIDMSRNLSRRSSDLVALSASLSLLFVSALSN 60
           FPFNFFHFSTASDRAFQFVAEVLDTDSQTIDMSRNLSRRSSDLVALSASLSLLFVSALSN
Sbjct: 1   FPFNFFHFSTASDRAFQFVAEVLDTDSQTIDMSRNLSRRSSDLVALSASLSLLFVSALSN 60

Query: 61  DSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKL 120
           DSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKL
Sbjct: 61  DSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARLLKL 120

Query: 121 FEEDDELEVELGLRD 136
           FEEDDELEVELGLRD
Sbjct: 121 FEEDDELEVELGLRD 135

[Close]
BLAST of Carg25382 vs. NCBI nr
Match: XP_022929545.1 (uncharacterized protein LOC111436082 [Cucurbita moschata] >XP_022929546.1 uncharacterized protein LOC111436082 [Cucurbita moschata] >XP_022929547.1 uncharacterized protein LOC111436082 [Cucurbita moschata] >XP_022984816.1 uncharacterized protein LOC111482987 [Cucurbita maxima] >XP_023551749.1 uncharacterized protein LOC111809626 [Cucurbita pepo subsp. pepo] >XP_023551750.1 uncharacterized protein LOC111809626 [Cucurbita pepo subsp. pepo] >XP_023551751.1 uncharacterized protein LOC111809626 [Cucurbita pepo subsp. pepo] >XP_023551752.1 uncharacterized protein LOC111809626 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.2 bits (461), Expect = 3.0e-42
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 32  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF 91
           MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF
Sbjct: 1   MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF 60

Query: 92  LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 136
           LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 61  LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104

[Close]
BLAST of Carg25382 vs. NCBI nr
Match: KAG6577362.1 (Elongation factor 1-gamma 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 162.2 bits (409), Expect = 3.2e-36
Identity = 96/114 (84.21%), Postives = 100/114 (87.72%), Query Frame = 0 

Query: 1   FPFNFFHFSTASDRAFQFVAEVLDTDSQTIDMSRNLSRRSSDLVALSASLSLLFVSALSN 60
           FPFNFFHFSTASDRAFQFVAEVLDTDSQTIDMSRNLSRRSSDLVALSASLSLLFVSALSN
Sbjct: 413 FPFNFFHFSTASDRAFQFVAEVLDTDSQTIDMSRNLSRRSSDLVALSASLSLLFVSALSN 472

Query: 61  DSSGKDSINSGKHSSSSSKTGSMVAIILLGFL---------VVVLLSFFLFKLW 106
           DSSGKDSINSGKHSSSSSKTGSMVAIILLGFL          V +++F + K W
Sbjct: 473 DSSGKDSINSGKHSSSSSKTGSMVAIILLGFLFTEAGLRNHYVGIIAFQMAKRW 526

[Close]
BLAST of Carg25382 vs. NCBI nr
Match: XP_016901207.1 (PREDICTED: uncharacterized protein LOC103493315 [Cucumis melo])

HSP 1 Score: 155.6 bits (392), Expect = 3.0e-34
Identity = 90/104 (86.54%), Postives = 93/104 (89.42%), Query Frame = 0 

Query: 32  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF 91
           MSRNLS R SD ++ SASLSLLFVSALS+DSS KDSINSG H SS S TGSMVAIILLG 
Sbjct: 1   MSRNLSPRPSDFLSFSASLSLLFVSALSDDSSKKDSINSGNHPSSRSNTGSMVAIILLGI 60

Query: 92  LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 136
           LV VLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 61  LVAVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104

[Close]
BLAST of Carg25382 vs. NCBI nr
Match: KAE8650189.1 (hypothetical protein Csa_011006, partial [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 5.1e-34
Identity = 90/106 (84.91%), Postives = 94/106 (88.68%), Query Frame = 0 

Query: 30  IDMSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILL 89
           IDMSRN S R SD ++ SASLSLLFVSALS+DSS KDS +SG H SS S TGSMVAIILL
Sbjct: 88  IDMSRNSSPRPSDFLSFSASLSLLFVSALSDDSSKKDSTHSGNHPSSRSSTGSMVAIILL 147

Query: 90  GFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 136
           G LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 148 GILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 193

[Close]
BLAST of Carg25382 vs. ExPASy TrEMBL
Match: A0A6J1EUP1 (uncharacterized protein LOC111436082 OS=Cucurbita moschata OX=3662 GN=LOC111436082 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.5e-42
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 32  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF 91
           MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF
Sbjct: 1   MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF 60

Query: 92  LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 136
           LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 61  LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104

[Close]
BLAST of Carg25382 vs. ExPASy TrEMBL
Match: A0A6J1J6C2 (uncharacterized protein LOC111482987 OS=Cucurbita maxima OX=3661 GN=LOC111482987 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.5e-42
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 32  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF 91
           MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF
Sbjct: 1   MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF 60

Query: 92  LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 136
           LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 61  LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104

[Close]
BLAST of Carg25382 vs. ExPASy TrEMBL
Match: A0A1S4DZ07 (uncharacterized protein LOC103493315 OS=Cucumis melo OX=3656 GN=LOC103493315 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.5e-34
Identity = 90/104 (86.54%), Postives = 93/104 (89.42%), Query Frame = 0 

Query: 32  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF 91
           MSRNLS R SD ++ SASLSLLFVSALS+DSS KDSINSG H SS S TGSMVAIILLG 
Sbjct: 1   MSRNLSPRPSDFLSFSASLSLLFVSALSDDSSKKDSINSGNHPSSRSNTGSMVAIILLGI 60

Query: 92  LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 136
           LV VLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 61  LVAVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104

[Close]
BLAST of Carg25382 vs. ExPASy TrEMBL
Match: A0A0A0L5F0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110610 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.5e-34
Identity = 90/106 (84.91%), Postives = 94/106 (88.68%), Query Frame = 0 

Query: 30  IDMSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILL 89
           IDMSRN S R SD ++ SASLSLLFVSALS+DSS KDS +SG H SS S TGSMVAIILL
Sbjct: 67  IDMSRNSSPRPSDFLSFSASLSLLFVSALSDDSSKKDSTHSGNHPSSRSSTGSMVAIILL 126

Query: 90  GFLVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 136
           G LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 127 GILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 172

[Close]
BLAST of Carg25382 vs. ExPASy TrEMBL
Match: A0A5A7V4C4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004510 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 3.6e-25
Identity = 70/78 (89.74%), Postives = 71/78 (91.03%), Query Frame = 0 

Query: 58  LSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREEQYARL 117
           LS+DSS KDSINSG H SS S TGSMVAIILLG LV VLLSFFLFKLWQKKRREEQYARL
Sbjct: 37  LSDDSSKKDSINSGNHPSSRSNTGSMVAIILLGILVAVLLSFFLFKLWQKKRREEQYARL 96

Query: 118 LKLFEEDDELEVELGLRD 136
           LKLFEEDDELEVELGLRD
Sbjct: 97  LKLFEEDDELEVELGLRD 114

[Close]
BLAST of Carg25382 vs. TAIR 10
Match: AT1G09645.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G57765.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 97.1 bits (240), Expect = 1.2e-20
Identity = 54/88 (61.36%), Postives = 68/88 (77.27%), Query Frame = 0 

Query: 48  ASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQK 107
           AS+ L F   LS DS   ++    +  +SSSKTG+ V ++L+GF+ V + SFFL+KLWQK
Sbjct: 19  ASIGLQFFLGLSGDSKNTNAGVKTESHTSSSKTGTKVILVLVGFVAVAMFSFFLYKLWQK 78

Query: 108 KRREEQYARLLKLFEEDDELEVELGLRD 136
           K+R+EQYARLLKLFEEDDELEVELGLRD
Sbjct: 79  KKRDEQYARLLKLFEEDDELEVELGLRD 106

[Close]
BLAST of Carg25382 vs. TAIR 10
Match: AT1G57765.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09645.1); Has 68 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 94.0 bits (232), Expect = 1.0e-19
Identity = 56/90 (62.22%), Postives = 66/90 (73.33%), Query Frame = 0 

Query: 46  LSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLW 105
           L AS+ L F   +S D +   +    +  +SSSKTG+ V  ILLGF  V  LSFFL+KLW
Sbjct: 18  LCASICLHFFLGISGDPNSSSTGAKAESHTSSSKTGTKVIFILLGFGAVAGLSFFLYKLW 77

Query: 106 QKKRREEQYARLLKLFEEDDELEVELGLRD 136
           QKK+R+EQYARLLKLFEEDDELEVELGLRD
Sbjct: 78  QKKKRDEQYARLLKLFEEDDELEVELGLRD 107

[Close]
BLAST of Carg25382 vs. TAIR 10
Match: AT1G57765.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09645.1). )

HSP 1 Score: 89.0 bits (219), Expect = 3.2e-18
Identity = 54/96 (56.25%), Postives = 69/96 (71.88%), Query Frame = 0 

Query: 44  VALSASLSLLFVSA----LSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSF 103
           + L   L++L++ +    +S D +   +    +  +SSSKTG+ V  ILLGF  V  LSF
Sbjct: 22  ICLHFFLAMLYLDSVYQCISGDPNSSSTGAKAESHTSSSKTGTKVIFILLGFGAVAGLSF 81

Query: 104 FLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 136
           FL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Sbjct: 82  FLYKLWQKKKRDEQYARLLKLFEEDDELEVELGLRD 117

[Close]
BLAST of Carg25382 vs. TAIR 10
Match: AT3G53490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G02720.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.0e-04
Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 0 

Query: 55  VSALSNDSSG--KDSINSGKHSSSSSKTGSMVAIILLGFLVVVLLSFFLFKLWQKKRREE 114
           V A SN  SG  K+    G H         ++ ++LLG + V LL    +K W+KK+R++
Sbjct: 147 VGAGSNKESGTEKEEQKGGMHPG----IVVLIVVLLLGVVAVGLL--VGYKYWRKKKRQQ 206

Query: 115 QYARLLKLFEEDDELEVELGLRD 136
           + AR LKLFE+ D++E ELGL +
Sbjct: 207 EQARFLKLFEDGDDIEDELGLEN 223

The following BLAST results are available for this feature:
BLAST of Carg25382 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7015450.13.2e-60100.00hypothetical protein SDJN02_23086, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022929545.13.0e-42100.00uncharacterized protein LOC111436082 [Cucurbita moschata] >XP_022929546.1 unchar... [more]
KAG6577362.13.2e-3684.21Elongation factor 1-gamma 3, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_016901207.13.0e-3486.54PREDICTED: uncharacterized protein LOC103493315 [Cucumis melo][more]
KAE8650189.15.1e-3484.91hypothetical protein Csa_011006, partial [Cucumis sativus][more]
BLAST of Carg25382 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg25382 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EUP11.5e-42100.00uncharacterized protein LOC111436082 OS=Cucurbita moschata OX=3662 GN=LOC1114360... [more]
A0A6J1J6C21.5e-42100.00uncharacterized protein LOC111482987 OS=Cucurbita maxima OX=3661 GN=LOC111482987... [more]
A0A1S4DZ071.5e-3486.54uncharacterized protein LOC103493315 OS=Cucumis melo OX=3656 GN=LOC103493315 PE=... [more]
A0A0A0L5F02.5e-3484.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110610 PE=4 SV=1[more]
A0A5A7V4C43.6e-2589.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of Carg25382 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G09645.11.2e-2061.36unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G57765.11.0e-1962.22unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G57765.23.2e-1856.25unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G53490.12.0e-0439.76unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33780:SF10TRANSMEMBRANE PROTEINcoord: 32..135
NoneNo IPR availablePANTHERPTHR33780EXPRESSED PROTEINcoord: 32..135

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25382-RACarg25382-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane