Carg25367 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25367
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	C2H2-type domain-containing protein
Location	Carg_Chr06: 4382861 .. 4383406 (-)
RNA-Seq Expression	Carg25367
Synteny	Carg25367

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAACCCGAACCAAGCTCACCGAGACGACGACGACGACGATTCATGGGAGATTAGGGCTTTCGCCGAAGACACTATGGGCACAACTTGGCCACCTAGGTTCTACAATTGCACATTTTGTGGACGAGAATTTAGATCTGCCCAAGCCTTGGGTGGCCACATGAATGTTCATCGTCGCGACCGTGTACGTTTTCGCCACGAAAATCAACCCATCTCATCCTTGACATCGTCTTTCACGATCCCCGCCACCAATGTCGTCTACGATGGTGGTGGGGTTTGTTTCTTCTACCAATTACCAAATGAAAACAGCAATTTCCTCCACTCCATCTCTTTACACTCCGCTACCCCATATCCATCAAACAATCCGATTGCGTCGTCCATACCATCTTTAAAGTTGTCGGGAGAGCTCGGAGGAACATCGAGCTCCTCGTCTCACTGCAGTCACATGTCTAGCAAAGGAGATGAATCCTTGATATCAATTGATGATGGAGCTGAGAAGCTTGATCTAGAGCTGAGACTTGGACAAAGGCCATCTCCAGCTTGA

mRNA sequence

ATGTGGAACCCGAACCAAGCTCACCGAGACGACGACGACGACGATTCATGGGAGATTAGGGCTTTCGCCGAAGACACTATGGGCACAACTTGGCCACCTAGGTTCTACAATTGCACATTTTGTGGACGAGAATTTAGATCTGCCCAAGCCTTGGGTGGCCACATGAATGTTCATCGTCGCGACCGTGTACGTTTTCGCCACGAAAATCAACCCATCTCATCCTTGACATCGTCTTTCACGATCCCCGCCACCAATGTCGTCTACGATGGTGGTGGGGTTTGTTTCTTCTACCAATTACCAAATGAAAACAGCAATTTCCTCCACTCCATCTCTTTACACTCCGCTACCCCATATCCATCAAACAATCCGATTGCGTCGTCCATACCATCTTTAAAGTTGTCGGGAGAGCTCGGAGGAACATCGAGCTCCTCGTCTCACTGCAGTCACATGTCTAGCAAAGGAGATGAATCCTTGATATCAATTGATGATGGAGCTGAGAAGCTTGATCTAGAGCTGAGACTTGGACAAAGGCCATCTCCAGCTTGA

Coding sequence (CDS)

ATGTGGAACCCGAACCAAGCTCACCGAGACGACGACGACGACGATTCATGGGAGATTAGGGCTTTCGCCGAAGACACTATGGGCACAACTTGGCCACCTAGGTTCTACAATTGCACATTTTGTGGACGAGAATTTAGATCTGCCCAAGCCTTGGGTGGCCACATGAATGTTCATCGTCGCGACCGTGTACGTTTTCGCCACGAAAATCAACCCATCTCATCCTTGACATCGTCTTTCACGATCCCCGCCACCAATGTCGTCTACGATGGTGGTGGGGTTTGTTTCTTCTACCAATTACCAAATGAAAACAGCAATTTCCTCCACTCCATCTCTTTACACTCCGCTACCCCATATCCATCAAACAATCCGATTGCGTCGTCCATACCATCTTTAAAGTTGTCGGGAGAGCTCGGAGGAACATCGAGCTCCTCGTCTCACTGCAGTCACATGTCTAGCAAAGGAGATGAATCCTTGATATCAATTGATGATGGAGCTGAGAAGCTTGATCTAGAGCTGAGACTTGGACAAAGGCCATCTCCAGCTTGA

Protein sequence

MWNPNQAHRDDDDDDSWEIRAFAEDTMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFRHENQPISSLTSSFTIPATNVVYDGGGVCFFYQLPNENSNFLHSISLHSATPYPSNNPIASSIPSLKLSGELGGTSSSSSHCSHMSSKGDESLISIDDGAEKLDLELRLGQRPSPA

Homology

[Close]

BLAST of Carg25367 vs. NCBI nr
Match: KAG7028403.1 (Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375.2 bits (962), Expect = 3.2e-100
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDTMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRR 60
           MWNPNQAHRDDDDDDSWEIRAFAEDTMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRR
Sbjct: 1   MWNPNQAHRDDDDDDSWEIRAFAEDTMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRR 60

Query: 61  DRVRFRHENQPISSLTSSFTIPATNVVYDGGGVCFFYQLPNENSNFLHSISLHSATPYPS 120
           DRVRFRHENQPISSLTSSFTIPATNVVYDGGGVCFFYQLPNENSNFLHSISLHSATPYPS
Sbjct: 61  DRVRFRHENQPISSLTSSFTIPATNVVYDGGGVCFFYQLPNENSNFLHSISLHSATPYPS 120

Query: 121 NNPIASSIPSLKLSGELGGTSSSSSHCSHMSSKGDESLISIDDGAEKLDLELRLGQRPSP 180
           NNPIASSIPSLKLSGELGGTSSSSSHCSHMSSKGDESLISIDDGAEKLDLELRLGQRPSP
Sbjct: 121 NNPIASSIPSLKLSGELGGTSSSSSHCSHMSSKGDESLISIDDGAEKLDLELRLGQRPSP 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of Carg25367 vs. NCBI nr
Match: KAG6596923.1 (Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 374.8 bits (961), Expect = 4.2e-100
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDTMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRR 60
           MWNPNQAHRDDDDDDSWEIRAFAEDTMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRR
Sbjct: 1   MWNPNQAHRDDDDDDSWEIRAFAEDTMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRR 60

Query: 61  DRVRFRHENQPISSLTSSFTIPATNVVYDGGGVCFFYQLPNENSNFLHSISLHSATPYPS 120
           DRVRFRHENQPISSLTSSFTIPATNV+YDGGGVCFFYQLPNENSNFLHSISLHSATPYPS
Sbjct: 61  DRVRFRHENQPISSLTSSFTIPATNVIYDGGGVCFFYQLPNENSNFLHSISLHSATPYPS 120

Query: 121 NNPIASSIPSLKLSGELGGTSSSSSHCSHMSSKGDESLISIDDGAEKLDLELRLGQRPSP 180
           NNPIASSIPSLKLSGELGGTSSSSSHCSHMSSKGDESLISIDDGAEKLDLELRLGQRPSP
Sbjct: 121 NNPIASSIPSLKLSGELGGTSSSSSHCSHMSSKGDESLISIDDGAEKLDLELRLGQRPSP 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of Carg25367 vs. NCBI nr
Match: XP_038905278.1 (transcriptional regulator SUPERMAN-like [Benincasa hispida])

HSP 1 Score: 253.8 bits (647), Expect = 1.1e-63
Identity = 136/195 (69.74%), Postives = 152/195 (77.95%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           MWNP+QAH+ D+DDDSWEIRAFAEDT   MGTTWPPRFYNCTFCGREFRSAQALGGHMNV
Sbjct: 1   MWNPSQAHQ-DEDDDSWEIRAFAEDTENVMGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60

Query: 61  HRRDRVRFRH--ENQPISSLTSSFTIPATNVVY-DGGGVCFFYQLPNENSNFLHSISLH- 120
           HRRDRVR  H   +  I  ++SSFTIPA  +VY +  GVCF YQLP  + +FL+SI+   
Sbjct: 61  HRRDRVRLHHHPHSNSIQPISSSFTIPAPKLVYNESDGVCFLYQLPKNSIDFLNSITSSS 120

Query: 121 ------SATPYPSNNPIASSIPSLKLSGEL-GGTSSSSSHCSHMSSKGDESLISIDDGAE 180
                 SAT YPSN P  SS+ S+K  GEL GGTSSSSSHCSHMS KGD+S+ISIDDG E
Sbjct: 121 ACLQSPSATQYPSNIPTTSSLQSVKSPGELRGGTSSSSSHCSHMSGKGDDSIISIDDGNE 180

Query: 181 KLDLELRLGQRPSPA 182
           KLDLELRLG R SPA
Sbjct: 181 KLDLELRLGHRTSPA 194

[Close]

BLAST of Carg25367 vs. NCBI nr
Match: XP_004148758.1 (transcriptional regulator SUPERMAN [Cucumis sativus] >ADO15281.1 palmate-like pentafoliata 1 transcription factor, partial [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 3.5e-62
Identity = 135/194 (69.59%), Postives = 154/194 (79.38%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           MWNPNQAH+ D+DDDSWEIRAFAEDT   MGTTWPPRFYNCTFCGREFRSAQALGGHMNV
Sbjct: 1   MWNPNQAHQ-DEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60

Query: 61  HRRDRVRFRHENQP--ISSLTSSFTIPATNVVYDG-GGVCFFYQLPNENSNFLHSIS--- 120
           HRRDRVRF H+ QP  I  ++ SFTIP   ++Y+    VCF YQLPN+N NFL+SI+   
Sbjct: 61  HRRDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSD 120

Query: 121 --LHSA--TPYPSNNPIASSIPSLKLSGEL-GGTSSSSSHCSHMSSKGDESLISIDDGAE 180
             L S+    +PS+   ASS+ SLK  GEL GGTSSSSSHCSH+SSKGD+SLISI+DG E
Sbjct: 121 SCLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNE 180

[Close]

BLAST of Carg25367 vs. NCBI nr
Match: KAA0053050.1 (transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa] >TYK11505.1 transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 9.6e-60
Identity = 131/195 (67.18%), Postives = 150/195 (76.92%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           M NPNQAH+ D+D DSWEIRAFAEDT   MGTTWPPRFYNCTFCGREFRSAQALGGHMNV
Sbjct: 1   MLNPNQAHQ-DEDGDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60

Query: 61  HRRDRVRFRHENQ--PISSLTSSFTIPATNVVYDG--GGVCFFYQLPNENSNFLHSISLH 120
           HRRDRVRF H+ Q   I  ++ SFTIP   ++Y+     VCF YQLPN+N +FL+SI+  
Sbjct: 61  HRRDRVRFHHQTQLNSIQHVSPSFTIPTPKLIYNNEIDEVCFLYQLPNDNIDFLNSITSS 120

Query: 121 -------SATPYPSNNPIASSIPSLKLSGEL-GGTSSSSSHCSHMSSKGDESLISIDDGA 180
                  S   +PS++  ASS+ SLK  GEL GGTSSSSSHCSHMSSKGD+SLISI+DG 
Sbjct: 121 GACLQSPSTAQHPSSSRTASSLQSLKSPGELRGGTSSSSSHCSHMSSKGDDSLISINDGN 180

[Close]

BLAST of Carg25367 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.7e-16
Identity = 52/138 (37.68%), Postives = 75/138 (54.35%), Query Frame = 0


Query: 2   WNPNQAHRDDDDDDSWEIRAFAE-DTMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRR 61
           W P ++++    + SWE  AFAE D  G+ WPPR Y C+FC REF+SAQALGGHMNVHRR
Sbjct: 8   WIPKKSNK----ESSWEELAFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRR 67

Query: 62  DRVRFRHENQ----PISSLTSSFTI--PATNVVYDGGGVCFFYQLPN---ENSNFLHSIS 121
           DR R +  +     P SS +  +     + N+         F   PN      + +  +S
Sbjct: 68  DRARLKQADDQYLFPKSSSSPEYPSHKDSDNIHETSCYTLVFNTKPNYFKTQHSCVIDLS 127

Query: 122 LHSATPYPSNNPIASSIP 130
             S+ PY + + ++S +P
Sbjct: 128 SSSSLPYLTPSRVSSGLP 141

[Close]

BLAST of Carg25367 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-15
Identity = 63/166 (37.95%), Postives = 81/166 (48.80%), Query Frame = 0


Query: 27  MGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFRHENQPISSLTSSFTIPATNV 86
           +G +WPPR Y C+FC REFRSAQALGGHMNVHRRDR R R +  P SS T S   P  N 
Sbjct: 38  LGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNY 97

Query: 87  VYD---------GGGVCFFYQLPNENSNFLHSISLHSATPYPSNNP-IASSIPSLKLSGE 146
            Y             +  F  L   +S    +  + S +P   + P  A       L  E
Sbjct: 98  SYSTMANSPPPHHSPLTLFPTLSPPSSPRYRAGLIRSLSPKSKHTPENACKTKKSSLLVE 157

Query: 147 LGGTSSSSSHCSHMSSKGDESLIS-------IDDGAEKLDLELRLG 176
            G  +  +S  +    + DE +IS       I++  + LDLELRLG
Sbjct: 158 AGEATRFTSKDACKILRNDE-IISLELEIGLINESEQDLDLELRLG 202

[Close]

BLAST of Carg25367 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-13
Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 0


Query: 28 GTTWPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFRHENQPISSLTSSFTIPAT 85
          G  WPPR Y+C+FCGREF+SAQALGGHMNVHRRDR R + +     SL+ S T  AT
Sbjct: 47 GCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQ-----SLSPSSTDQAT 98

[Close]

BLAST of Carg25367 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-11
Identity = 32/59 (54.24%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 31  WPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFR---------HENQPISSLTSSFT 81
           WPP+ Y C+FC REFRSAQALGGHMNVHRRDR + R         H + PI++   +F+
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFS 102

[Close]

BLAST of Carg25367 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.3e-06
Identity = 27/74 (36.49%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 22  FAEDTMGTTWP--PRFYNCTFCGREFRSAQALGGHMNVHRRDRV----------RFRHEN 81
           F +DT  T     PR ++C +C R+F S+QALGGH N H+R+R            F H +
Sbjct: 43  FNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHH 102

Query: 82  QPISSLTSSFTIPA 84
           +P +  +SS  + A
Sbjct: 103 RPYTYTSSSLGMQA 116

[Close]

BLAST of Carg25367 vs. ExPASy TrEMBL
Match: E2IBP9 (Palmate-like pentafoliata 1 transcription factor (Fragment) OS=Cucumis sativus OX=3659 GN=PALM1 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.7e-62
Identity = 135/194 (69.59%), Postives = 154/194 (79.38%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           MWNPNQAH+ D+DDDSWEIRAFAEDT   MGTTWPPRFYNCTFCGREFRSAQALGGHMNV
Sbjct: 1   MWNPNQAHQ-DEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60

Query: 61  HRRDRVRFRHENQP--ISSLTSSFTIPATNVVYDG-GGVCFFYQLPNENSNFLHSIS--- 120
           HRRDRVRF H+ QP  I  ++ SFTIP   ++Y+    VCF YQLPN+N NFL+SI+   
Sbjct: 61  HRRDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSD 120

Query: 121 --LHSA--TPYPSNNPIASSIPSLKLSGEL-GGTSSSSSHCSHMSSKGDESLISIDDGAE 180
             L S+    +PS+   ASS+ SLK  GEL GGTSSSSSHCSH+SSKGD+SLISI+DG E
Sbjct: 121 SCLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNE 180

[Close]

BLAST of Carg25367 vs. ExPASy TrEMBL
Match: A0A5A7UCW5 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001690 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 4.6e-60
Identity = 131/195 (67.18%), Postives = 150/195 (76.92%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           M NPNQAH+ D+D DSWEIRAFAEDT   MGTTWPPRFYNCTFCGREFRSAQALGGHMNV
Sbjct: 1   MLNPNQAHQ-DEDGDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60

Query: 61  HRRDRVRFRHENQ--PISSLTSSFTIPATNVVYDG--GGVCFFYQLPNENSNFLHSISLH 120
           HRRDRVRF H+ Q   I  ++ SFTIP   ++Y+     VCF YQLPN+N +FL+SI+  
Sbjct: 61  HRRDRVRFHHQTQLNSIQHVSPSFTIPTPKLIYNNEIDEVCFLYQLPNDNIDFLNSITSS 120

Query: 121 -------SATPYPSNNPIASSIPSLKLSGEL-GGTSSSSSHCSHMSSKGDESLISIDDGA 180
                  S   +PS++  ASS+ SLK  GEL GGTSSSSSHCSHMSSKGD+SLISI+DG 
Sbjct: 121 GACLQSPSTAQHPSSSRTASSLQSLKSPGELRGGTSSSSSHCSHMSSKGDDSLISINDGN 180

[Close]

BLAST of Carg25367 vs. ExPASy TrEMBL
Match: A0A1S3BKB5 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103490792 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 4.6e-60
Identity = 131/195 (67.18%), Postives = 150/195 (76.92%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           M NPNQAH+ D+D DSWEIRAFAEDT   MGTTWPPRFYNCTFCGREFRSAQALGGHMNV
Sbjct: 71  MLNPNQAHQ-DEDGDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNV 130

Query: 61  HRRDRVRFRHENQ--PISSLTSSFTIPATNVVYDG--GGVCFFYQLPNENSNFLHSISLH 120
           HRRDRVRF H+ Q   I  ++ SFTIP   ++Y+     VCF YQLPN+N +FL+SI+  
Sbjct: 131 HRRDRVRFHHQTQLNSIQHVSPSFTIPTPKLIYNNEIDEVCFLYQLPNDNIDFLNSITSS 190

Query: 121 -------SATPYPSNNPIASSIPSLKLSGEL-GGTSSSSSHCSHMSSKGDESLISIDDGA 180
                  S   +PS++  ASS+ SLK  GEL GGTSSSSSHCSHMSSKGD+SLISI+DG 
Sbjct: 191 GACLQSPSTAQHPSSSRTASSLQSLKSPGELRGGTSSSSSHCSHMSSKGDDSLISINDGN 250

[Close]

BLAST of Carg25367 vs. ExPASy TrEMBL
Match: A0A6J1CUC9 (zinc finger protein 11-like OS=Momordica charantia OX=3673 GN=LOC111014851 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 3.0e-59
Identity = 133/197 (67.51%), Postives = 148/197 (75.13%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           MWNPNQ H+ DDDDDSWEIRAFAEDT   MGTTWPPRFY CTFC REFRSAQALGGHMNV
Sbjct: 1   MWNPNQPHQ-DDDDDSWEIRAFAEDTGNIMGTTWPPRFYTCTFCRREFRSAQALGGHMNV 60

Query: 61  HRRDRVRFRHENQP------ISSLTSSFTIPATNVVY--DGGGVCFFYQLPNENSNFLHS 120
           HRRDR RF H+ QP       S  +SSF +P    +Y   GGG CFFYQLPN+N  FL+ 
Sbjct: 61  HRRDRARFHHQTQPNSIQPISSPSSSSFAVPTAEDIYGGGGGGFCFFYQLPNDNGGFLNP 120

Query: 121 ISLHSA--TPYPSNNPIASSIPSLKLSGELGGTSS-SSSHCSHMSSKGD-ESLISIDDGA 180
           I+  +   +PYPSN   +SS+PS K   EL GTSS SSSHCSH+SSKGD ESLISIDDG 
Sbjct: 121 ITSGACLRSPYPSN---SSSLPSAKSPEELRGTSSASSSHCSHISSKGDHESLISIDDGD 180

Query: 181 E-KLDLELRLGQRPSPA 182
           + KLDLELRLG RPSP+
Sbjct: 181 DPKLDLELRLGHRPSPS 193

[Close]

BLAST of Carg25367 vs. ExPASy TrEMBL
Match: A0A2N9EKI1 (C2H2-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3195 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.5e-39
Identity = 108/206 (52.43%), Postives = 127/206 (61.65%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           MWNP QAH+  +DDDSWE+RAFAEDT   +GTTWPPR Y C FC REFRSAQALGGHMNV
Sbjct: 1   MWNPKQAHQ--EDDDSWEVRAFAEDTGNILGTTWPPRSYTCNFCRREFRSAQALGGHMNV 60

Query: 61  HRRDRVRFRHENQPIS--------SLTSSFTIPATNVVYDGGGVCFFYQLPNENSNFLHS 120
           HRRDR R  H+ QP S        + TSS  IP+   + +GGG+C  YQLPN N+ F  S
Sbjct: 61  HRRDRARL-HQAQPSSINPITSSPNSTSSLIIPSQEFLANGGGLCLLYQLPNYNTAFPTS 120

Query: 121 I----------SLHSATPYPSNN---PIASSIPSLKLSGELGGTSSSSSHCSH-MSSKGD 179
                      +L S +PYP NN   P +S  P+    G   GT+ SSS  S+  SSK +
Sbjct: 121 TPINTCIESPSTLLSISPYPPNNLISPASSPPPTNFPLGPPRGTNPSSSSSSYCYSSKPE 180

[Close]

BLAST of Carg25367 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 3.5e-28
Identity = 79/206 (38.35%), Postives = 109/206 (52.91%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT----MGTTWPPRFYNCTFCGREFRSAQALGGHMN 60
           MWNPN+    +DDD+SWE++AF +DT     GTTWPPR Y C FC REFRSAQALGGHMN
Sbjct: 7   MWNPNKIEELEDDDESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQALGGHMN 66

Query: 61  VHRRDRVRFR-HENQPISSLTSSF-----------TIPATNVVYDG-----GGVCFFYQL 120
           VHRRDR   R H+   +++   S             +P T ++         G+  FYQL
Sbjct: 67  VHRRDRASSRAHQGSTVAAAARSGHGGMLLNSCAPPLPTTTLIIQSTASNIEGLSHFYQL 126

Query: 121 PNENSNFLHS---ISLHSATPYPSNNPIASSIPSLKLSGELGGTSSSSSHCSHMSSKGDE 179
            N +  F +S   ++L+  T +P +N     +P   L+  +             S+  DE
Sbjct: 127 QNPSGIFGNSGDMVNLYGTTSFPPSN-----LPFSMLNSPV----EVPPRLIEYSTGDDE 186

[Close]

BLAST of Carg25367 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 85.5 bits (210), Expect = 4.8e-17
Identity = 52/138 (37.68%), Postives = 75/138 (54.35%), Query Frame = 0


Query: 2   WNPNQAHRDDDDDDSWEIRAFAE-DTMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRR 61
           W P ++++    + SWE  AFAE D  G+ WPPR Y C+FC REF+SAQALGGHMNVHRR
Sbjct: 8   WIPKKSNK----ESSWEELAFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRR 67

Query: 62  DRVRFRHENQ----PISSLTSSFTI--PATNVVYDGGGVCFFYQLPN---ENSNFLHSIS 121
           DR R +  +     P SS +  +     + N+         F   PN      + +  +S
Sbjct: 68  DRARLKQADDQYLFPKSSSSPEYPSHKDSDNIHETSCYTLVFNTKPNYFKTQHSCVIDLS 127

Query: 122 LHSATPYPSNNPIASSIP 130
             S+ PY + + ++S +P
Sbjct: 128 SSSSLPYLTPSRVSSGLP 141

[Close]

BLAST of Carg25367 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 63/166 (37.95%), Postives = 81/166 (48.80%), Query Frame = 0


Query: 27  MGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFRHENQPISSLTSSFTIPATNV 86
           +G +WPPR Y C+FC REFRSAQALGGHMNVHRRDR R R +  P SS T S   P  N 
Sbjct: 38  LGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNY 97

Query: 87  VYD---------GGGVCFFYQLPNENSNFLHSISLHSATPYPSNNP-IASSIPSLKLSGE 146
            Y             +  F  L   +S    +  + S +P   + P  A       L  E
Sbjct: 98  SYSTMANSPPPHHSPLTLFPTLSPPSSPRYRAGLIRSLSPKSKHTPENACKTKKSSLLVE 157

Query: 147 LGGTSSSSSHCSHMSSKGDESLIS-------IDDGAEKLDLELRLG 176
            G  +  +S  +    + DE +IS       I++  + LDLELRLG
Sbjct: 158 AGEATRFTSKDACKILRNDE-IISLELEIGLINESEQDLDLELRLG 202

[Close]

BLAST of Carg25367 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 0


Query: 28 GTTWPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFRHENQPISSLTSSFTIPAT 85
          G  WPPR Y+C+FCGREF+SAQALGGHMNVHRRDR R + +     SL+ S T  AT
Sbjct: 47 GCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQ-----SLSPSSTDQAT 98

[Close]

BLAST of Carg25367 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 )

HSP 1 Score: 71.2 bits (173), Expect = 9.4e-13
Identity = 32/59 (54.24%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 31  WPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFR---------HENQPISSLTSSFT 81
           WPP+ Y C+FC REFRSAQALGGHMNVHRRDR + R         H + PI++   +F+
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFS 102

The following BLAST results are available for this feature:

BLAST of Carg25367 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028403.1	3.2e-100	100.00	Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6596923.1	4.2e-100	99.45	Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038905278.1	1.1e-63	69.74	transcriptional regulator SUPERMAN-like [Benincasa hispida]	[more]
XP_004148758.1	3.5e-62	69.59	transcriptional regulator SUPERMAN [Cucumis sativus] >ADO15281.1 palmate-like pe...	[more]
KAA0053050.1	9.6e-60	67.18	transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa] >TYK11505.1 t...	[more]

BLAST of Carg25367 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80942	6.7e-16	37.68	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q38895	2.0e-15	37.95	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
Q9LHS9	1.8e-13	63.16	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9SLB8	1.3e-11	54.24	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]
Q39266	6.3e-06	36.49	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]

BLAST of Carg25367 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E2IBP9	1.7e-62	69.59	Palmate-like pentafoliata 1 transcription factor (Fragment) OS=Cucumis sativus O...	[more]
A0A5A7UCW5	4.6e-60	67.18	Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BKB5	4.6e-60	67.18	transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103490792 ...	[more]
A0A6J1CUC9	3.0e-59	67.51	zinc finger protein 11-like OS=Momordica charantia OX=3673 GN=LOC111014851 PE=4 ...	[more]
A0A2N9EKI1	1.5e-39	52.43	C2H2-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3195...	[more]

BLAST of Carg25367 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17810.1	3.5e-28	38.35	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G37740.1	4.8e-17	37.68	zinc-finger protein 10	[more]
AT3G23130.1	1.4e-16	37.95	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G06070.1	1.3e-14	63.16	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G42410.1	9.4e-13	54.24	zinc finger protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 36..58 e-value: 0.0036 score: 26.5
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 38..58
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 36..63 score: 11.759394
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 36..60 e-value: 1.4E-7 score: 31.4
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 20..81 e-value: 2.8E-6 score: 29.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..155
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 4..177
None	No IPR available	PANTHER	PTHR45801:SF5	OS07G0101800 PROTEIN	coord: 4..177
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 33..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25367-RA	Carg25367-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016132	brassinosteroid biosynthetic process
biological_process	GO:0010268	brassinosteroid homeostasis
biological_process	GO:0016125	sterol metabolic process
cellular_component	GO:0005783	endoplasmic reticulum
molecular_function	GO:0051777	ent-kaurenoate oxidase activity
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0097159	organic cyclic compound binding