Carg25329 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25329
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DEAD-box ATP-dependent RNA helicase 5-like
Location	Carg_Chr19: 1470958 .. 1477613 (+)
RNA-Seq Expression	Carg25329
Synteny	Carg25329

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTAGCTTCTCGTTCGCTGATTCTCTTCGACTCCACCTGAGCCGAGTTCTACCAGACGCTGCCATGGTTGGGAAGCTCAGAGAGGACGCTACCGTCAGCGAACCAGTGGCCCAAGAAGCTTTCGAGAAATGCGATACAAAAGCCGAGAAGAAGAAGAAGAAGAAGAAGAACAGAGACAAAGACTCTGGTTGTCAAGAGGAAAATGAAGTTAGTCCCAAGAGGAAGTTACAGGAAGGAACTGATTCAGAGATTCACAAGAAAAAGAAAAAGCACAAGAAATCGAAGGACGAAAACGTAAGCATCAATGCCTCCGACGAGAAAGAAGAGGCGAAGGTAGACGAAAATTCTACAGATCGATCCGTGGTGGTCACTGGTAAAGGTGTGAAGGAGGCAGGGTTTGTTCCGCTTAAGTCGTTTGTCGAAGCGGGACTTCCAGATGCAGTATTGGAGTGCTGTCGAACTTTCAAAAGCCCATCCCCTATTCAGTCCCACGCTTGGCCGTTCTTGTTGCATGGTCGAGACTTCATTGGAATCGCCGCGACAGGATCAGGTAATTTGTGGATTTGGCTGTCGAACATAATGTATATTGTGAAGCAGTGGATGATCTTTTAGTTATATGTGGTTTCAGGCAAGACTCTGGCGTTTGGGGTACCTGGTATAATGCATGTGTTGAACAAGAGGAAGGGCAAGATGCCGAAGGGTCGGAGTCCTCTCTGCTTAGTTCTATCACCTACGAGGGAATTAGCTCAACAGGTATGTGCTTACGAATTGGAAGTCACTTGGATTGAATATTGTGCTGCTGATAGTTTGCATCTAACCTTCTATGTCAAATTACACATTTCTGATAGCTTACGAATTGGAAGTCAATTGGATTGAAAATCACACATTTCTGTTCTATCTTCTATCTAAGAATAAATTGACTCAAGGGAAGTACAGGAAAAGGGTTTATAAAATATGGATGTCATACGGGGCTTTTAGGGTTAGGTTAGTCTCCTATTAGGTTTGAGAAGGAAAACTAGCTAATAACCTCTGAATAATGGGAAATTAGACAAGGTTTTATGACGTGAATGCTGACATGTAAACCTTGGTAGGGGTCGACTCGGATAGGAACCTCTTGGAACGCTATTCGCTTTATTATGGGGACGGGTCTGAACATTGTTAAGTTACTGCATCTCGAGATTAATTGCATTTGCAAAGTTAAATTGAATATCTAAGCCTTGTAATTATCATCGGATGTTATCAGTTTTATGAGTTGTAATAGTATTGGAATGGAGCAGCCAATGTCCATGAGAATTGAGATCACTGTAAATGTGTTCTGGCTGCAATGTTAGTATCATCTTATGTTGATCTTGTTGTTTTACCATTATTTCATTTCCTTCAATGAAAGTTCGCTTTCTTATTAAATAAATCTTGTTGTTTTACCATTTCAATTTGCGATTAATTATAGGCTTCATTTACTATGGCAGATTTCAAGTGTACTGCAAAATGCCGGAGAACCTTGTGGTGTGACGTCTACTTGTTTGTATGGTGGAGTCTCCAAAGGCAGCCAAATATCTTCTCTTAAATCTGGTGTTGTATGTTGTTTCTGCCTCCTTTTTGTGATTTGTGACTTTTTTCTTGATGTTGTAGATATCAATCAAGTTGGGAATTTCACTCGTTACTTTACTGAGTTTTTTTCTTGTTTCACATTTTGGATGATAATACGGTACCATTTACTTTATAATTTATAGGAAACACGCACACTCATGTCTCTCTCTCTCTCTCTCTCTCTTCCCCCTTCCATGTTGGTTAATATAAGTCTTTGTTTCTTTTCATTTTTTGAAATAAGTCTTTGTTTCTTTTCATTTTTTTTTCAAAAAATGAAAAGAAACTGCACACAGTCTGTACGCCCTGAAAATAACACATTCATGTTCTTACACTCAGGACATTGTGATTGGAACTCCTGGACGGTTAAAGGATTTGATGGAAATGGAGGTCTGCAGACTCTCAGAAGTGTCCTTTGTGGTATGCGACTAATCTTTGCTTACCATTCATATGAGAACCTGTATTTTCTTAATCTTAGCTGATAAATGGTCACTTTGAGTTAAATCTATCGATGTCTATCTCTTTTTCGGGATTTATGTTTCTCTATTTGCCATTTTGTGCGTTTATGTAGGGTGCAAGGTGTTCATGTAGAAAAAATATGCATTACAGCATGGAATTAACATGGTTGTGTGTCATTAAATATTGAAGTATTGAAGCACGGGGTAGGATTGCTAATCAGACATGATGCATCTATATGGGAATCTGTGAACTATAATATCCTATACTATAGAAGTTGAAAATATCATCTGATCCAATTCAGAGCATTCCTCAGTGGAGGTTTGGTTGAATGTTAGGATTTATGCCTCTTTGGGACTCAGAATTTTAATGAGCTTTGTTCTTAAACTCTGGTCTTGTTATTTTGGATTGGAGCTCTTCAATTACTATCCATGAAAGCTGAAAAAACTTTTAGTAAAAAGAGCTATAAAAATTTCAAACCCTGTGTTGCATAAACCCACTCGCGTTGATTACAATTTGGGTGTGCTTTTTTAAAATAAAAAAAATAAAAAAAAAAGAATGAAAAAATCAAGGGTGCACCTTAAGGACATTTAGCAGCTATGAACAATGCGCATGCAATTTTTAATTAATTTTTTTTTTTTATTATTTTACAAAATGACTTTGAAAGAGAATACTGATTAGTGATAATATATTTTGTTAGGTCCATCCTATTATCTTGCTGTTGGTTCGATGATAATTCTTTTACCAATTCTGTTATGTAAGCCTATTAATAAGACAGCTTAACTTCTTGTAGGTTCTTGATGAAGCAGATCGAATGTTGGACATGGGATTTGAACCAGAAGTGCGCTTTATATTAAGCCAGACTTGTAAAGGTTGAGATATTTGGTCTTCATTTGCACTGTCTTTGTTTTATTTTTTGCTCTATCATTCTCTCACACTTCTTAATGACTGTTATATCTTAAGTTTGCCTCTACAAGTCTGAAAATTTGTGGTGTTATGCTCTCATATTAAACTCTAATTCTTTTGCAGAACGCCAGATGGTTATGTTTAGTGCTACATGGCCTCTACAAGTTAATCAATTGGCTCAAGAATTCATGGATCCTGACCCAGTAAAGGTGTGCACATTATGAAAGTACTCAATTATATCCTAATTTTTTATTCTTTAACTTTTTAAGGAGTGTAAATATTGTATGACAGGTTGTTGTAGGTTCAGAGGATTTGGCTGCCAATCATGATGTCATGCAAATAGTTGAGGTATATCTGTCGTATCCAGATGAGATTTGGGCATCTAAATTAAGATAAATAGAGTTAATAATCGTTAATCATTGACATGGATAGGTTTTGGATGATCGATCACGTGATAATCGTTTAGTGGCTCTGCTTGAAAAATACCATAAATCTCAAAGGTATTTACTCCTTTTAATGAATATGAAATTATTCTAATTAATGATTTGTTATTCTATTACATTGGTTCGTGTTAGACATTTGTATTTGTTGTTTAATCTCACTGTTAGACAGTTTTTCATGGGAGGAGGGTGAGTGGCTAGGGATTGTAAAATCGTAAAAATAATAAACGAGGGAATCTTTCAACCCAATAGTAAACAAGCACTCTGAAGTGGGGAGATATTTTATTTTCAAACACCCAATTATTTGATTCCCTTTTAACGTACTATGGTGGGATATCATTATACATGAACATTGGAGAATAATTGTTTGGCATTAATGAGTTATTTTCTTTTCAGGAACAGAGTATTAGTTTTTGTCTTGTACAAGAATGAAGCTTCACGAGTTGAAAACATGCTTCAGAGAAGGTAATAATTATTTTACATCGTAGTATGTTGGGATCAACAATTTTGGCTCTTCTCTACATTCAGGACATTAATTTTACTTTTTAATGGATGATCTCTCTCTTTCTGCCTGTTATTATTCTCTAGGGGATGGAAGGCTGTTTCTATACACGGTGATAAAGCACAAACTGAACGCACAAAAGCACTGTCATTATTTAAAAGCGGAAGCTCTCCATTAATGGTATGCATTTGCAAATAGTTGTTCCTCCAACTGTCTCTGCCTATTTTGATATTGTCACAAGGCTCTTAAATTTGATCTCATCATGGTTCACTTTTTTTGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCTCTTGCCTTTTGGTATACATTTATATGATTAACCTTCTTGATAACTCAGCCCAATGATCCAAGATTTCAATAAGAGCCCTTGAATTAAAGAAATCAACCCCTCCTTATACCTTTTTGATAAGGCAATCCTAATCCTCAGCCCAACGATCCAAGATTTTATTGAAGCAAGAGCCCTTGAATTAAAGAAATCAACACCTCTTTATACATGATTCGGATCCACCAAGAGATAAGGTTAGAATTAGATTATCTCTTAAGATCAAAGATCTAGAAGTAAGATTTGGAACCTTGATCTAAATTTTGAGTCACTCCACCATCTAACTTGATATAACTTGATAAAGGCTTGATTGGATAACTCAGATGCAATCTACCACAAGAATTGCTTGAAACTTAGAAATAACAAAAATTATGCTTAAATTTCTAAGTATGAAAGTCTCAATTTGAGAGCTAAATTTCACTCATAAAAAATCTTTCTTTTACAGGTATTTAGAATCTCTCCACAAAAAAAGAACTTTTAACTCTTCAAATGCCCACTAAAGAAGTTAGAGACCATAATTAACTCCCTCTCCCTTTAAATCTCCACAAACAAAAAAGGTATAGCCACTTTGATAAGTACCCTTGTGCATATTCTTATAGATTCGTTAGAATGATTGGCTCCGTTTTCGGATCCAGGAGTTTCAGTATAGTAGGCGAGTACAATGGGAATCAATCAAGGTTCTTTTATGGCAGTCCAGCTATTTGACTTGAAAACCGCTAGTCAACTCATTCTTAAAACCAGCATTCTTAAGACCAAAGAGGCGGGCGGAAAAGGGGGGAAAGCTCTCTGTTCCTGGTTCTCCTGTAGTTGGATTATTTGGAACCACAAAAATCCTTAGTTAGAATGCGATTCCACCCCTTTCCCAGTTCCAAGAAATTATAAAATTAAAGTAATAAAGTTTTCTAATGCAATTTACAGCAACTTCATGTAAATACTCACTTTTGAAGCTCCAAATGGTTCTTTCTCAATCAAATCAACTTGTAACACGTGAAATAATGGTTGAACCAAGCCTATCCAATTTTGTAAAATGAATGCTTGTTGAATCTTCTTGGCCTTGGATCGTGTAATAGGTCCATTTTGATATATTGCAACACATTATGCTCATCTGCAAAAAAAAAAAAGGAAAAAAAAGTTGAAAATGTAAAAGCCAAATGGTGAGGTAACCTGTTTGTAATTTATAGTGCGACAGTAGAAGTATATTTTTCATGCTACACTGCTTTCTGTTGTGGTAGGAATATTCAATGCCTCTACAAATATAAATTTCATTTTTATTTTAATAGTTATTTATGGGTTGCTAAAATGTATATTTTCTTGTAATTATAGATAGCTACTGATGTAGCCGCTCGAGGTTTGGATATTCCGGATGTAGAAGTAGTAATAAACTATAGCTTTCCTCTCACAACGGAAGATTATGTCCATAGAATTGGGAGGACTGGACGGGCTGGTAAAAAGGGTGTTGCTCACACATTCTTCATGCAACAAAACAAGGTTATCTTGGCTATATATATATATATATATATATATATATATATATATATTACGCCCCTTTTTAAATGGAATAAAATAATTTGATCTATTGAATTCCTTTAACCTTTTTTGCCATTCTTTTAGGGACTTGCTGGGGAGCTGGTAAATGTTCTCCGTGAAGCTAAGCAAGTTGTACCTGATGCACTTCTGAAATTCGGTACTCATGTGAAGAAAAAGGTACATTATTCTTGTCTGTGAACTCAAATCAAGTATCCTGTTCATGGTTTTTGTTGTGTTAAACTATTTTTTTTTTTCATGTACTTTGGATAGTCTAAATTGAGTCCTCTTGAACTTCGATATTTTTTATAATTCAGTTGCATAAATTTTGATATTGTATACCTCTTAATTTCTAGAGGACTTATTATACATAAAATTTTAAGTTAGAAAGATTTATTAGATACTTTTGACACGAAATTTGTAATTTAACCCTTCTTTTTTCGTTAATATGGGGTTGATTGTTGGAGTAGGTAGATCTTTTTTGTAAGATTTGCATGTTAAAATGTGTCACTTTCTGCTCATGGTTACATTTTTCAAATGATTTTGATATCGGCAACTGTTCGCTTTTAGTGATTTTCGAAACATGTGGAGCGGCATGTTCTCTCATATGTATGTATGTATGTATGTATATCTATATATCTATATGTCTATGTATCTATATATATATATATAGTAACGATAAGCTTGTACAGAACATTAATTAATGGAGATGTTAATGCTTCACTGCAGGAATCCAAGCTCTATGGAGCGCACTTCAAGGAAATTACGGCAGATGCCCCCAAGTCCACGAAGATTACATTCAATGATTCCGACGAAGACTGATTAGCAAAATAGCTTTTGTTTTTGTTTGTTTTTTTTTTTTCTTAAATTTATAATTGAAAAGTATGCATTTTCTAT

mRNA sequence

CAATTAGCTTCTCGTTCGCTGATTCTCTTCGACTCCACCTGAGCCGAGTTCTACCAGACGCTGCCATGGTTGGGAAGCTCAGAGAGGACGCTACCGTCAGCGAACCAGTGGCCCAAGAAGCTTTCGAGAAATGCGATACAAAAGCCGAGAAGAAGAAGAAGAAGAAGAAGAACAGAGACAAAGACTCTGGTTGTCAAGAGGAAAATGAAGTTAGTCCCAAGAGGAAGTTACAGGAAGGAACTGATTCAGAGATTCACAAGAAAAAGAAAAAGCACAAGAAATCGAAGGACGAAAACGTAAGCATCAATGCCTCCGACGAGAAAGAAGAGGCGAAGGTAGACGAAAATTCTACAGATCGATCCGTGGTGGTCACTGGTAAAGGTGTGAAGGAGGCAGGGTTTGTTCCGCTTAAGTCGTTTGTCGAAGCGGGACTTCCAGATGCAGTATTGGAGTGCTGTCGAACTTTCAAAAGCCCATCCCCTATTCAGTCCCACGCTTGGCCGTTCTTGTTGCATGGTCGAGACTTCATTGGAATCGCCGCGACAGGATCAGGCAAGACTCTGGCGTTTGGGGTACCTGGTATAATGCATGTGTTGAACAAGAGGAAGGGCAAGATGCCGAAGGGTCGGAGTCCTCTCTGCTTAGTTCTATCACCTACGAGGGAATTAGCTCAACAGATTTCAAGTGTACTGCAAAATGCCGGAGAACCTTGTGGTGTGACGTCTACTTGTTTGTATGGTGGAGTCTCCAAAGGCAGCCAAATATCTTCTCTTAAATCTGGTGTTGACATTGTGATTGGAACTCCTGGACGGTTAAAGGATTTGATGGAAATGGAGGTCTGCAGACTCTCAGAAGTGTCCTTTGTGGTTCTTGATGAAGCAGATCGAATGTTGGACATGGGATTTGAACCAGAAGTGCGCTTTATATTAAGCCAGACTTGTAAAGAACGCCAGATGGTTATGTTTAGTGCTACATGGCCTCTACAAGTTAATCAATTGGCTCAAGAATTCATGGATCCTGACCCAGTAAAGGTTGTTGTAGGTTCAGAGGATTTGGCTGCCAATCATGATGTCATGCAAATAGTTGAGGTTTTGGATGATCGATCACGTGATAATCGTTTAGTGGCTCTGCTTGAAAAATACCATAAATCTCAAAGGAACAGAGTATTAGTTTTTGTCTTGTACAAGAATGAAGCTTCACGAGTTGAAAACATGCTTCAGAGAAGGGGATGGAAGGCTGTTTCTATACACGGTGATAAAGCACAAACTGAACGCACAAAAGCACTGTCATTATTTAAAAGCGGAAGCTCTCCATTAATGATAGCTACTGATGTAGCCGCTCGAGGTTTGGATATTCCGGATGTAGAAGTAGTAATAAACTATAGCTTTCCTCTCACAACGGAAGATTATGTCCATAGAATTGGGAGGACTGGACGGGCTGGTAAAAAGGGTGTTGCTCACACATTCTTCATGCAACAAAACAAGGGACTTGCTGGGGAGCTGGTAAATGTTCTCCGTGAAGCTAAGCAAGTTGTACCTGATGCACTTCTGAAATTCGGTACTCATGTGAAGAAAAAGGAATCCAAGCTCTATGGAGCGCACTTCAAGGAAATTACGGCAGATGCCCCCAAGTCCACGAAGATTACATTCAATGATTCCGACGAAGACTGATTAGCAAAATAGCTTTTGTTTTTGTTTGTTTTTTTTTTTTCTTAAATTTATAATTGAAAAGTATGCATTTTCTAT

Coding sequence (CDS)

ATGGTTGGGAAGCTCAGAGAGGACGCTACCGTCAGCGAACCAGTGGCCCAAGAAGCTTTCGAGAAATGCGATACAAAAGCCGAGAAGAAGAAGAAGAAGAAGAAGAACAGAGACAAAGACTCTGGTTGTCAAGAGGAAAATGAAGTTAGTCCCAAGAGGAAGTTACAGGAAGGAACTGATTCAGAGATTCACAAGAAAAAGAAAAAGCACAAGAAATCGAAGGACGAAAACGTAAGCATCAATGCCTCCGACGAGAAAGAAGAGGCGAAGGTAGACGAAAATTCTACAGATCGATCCGTGGTGGTCACTGGTAAAGGTGTGAAGGAGGCAGGGTTTGTTCCGCTTAAGTCGTTTGTCGAAGCGGGACTTCCAGATGCAGTATTGGAGTGCTGTCGAACTTTCAAAAGCCCATCCCCTATTCAGTCCCACGCTTGGCCGTTCTTGTTGCATGGTCGAGACTTCATTGGAATCGCCGCGACAGGATCAGGCAAGACTCTGGCGTTTGGGGTACCTGGTATAATGCATGTGTTGAACAAGAGGAAGGGCAAGATGCCGAAGGGTCGGAGTCCTCTCTGCTTAGTTCTATCACCTACGAGGGAATTAGCTCAACAGATTTCAAGTGTACTGCAAAATGCCGGAGAACCTTGTGGTGTGACGTCTACTTGTTTGTATGGTGGAGTCTCCAAAGGCAGCCAAATATCTTCTCTTAAATCTGGTGTTGACATTGTGATTGGAACTCCTGGACGGTTAAAGGATTTGATGGAAATGGAGGTCTGCAGACTCTCAGAAGTGTCCTTTGTGGTTCTTGATGAAGCAGATCGAATGTTGGACATGGGATTTGAACCAGAAGTGCGCTTTATATTAAGCCAGACTTGTAAAGAACGCCAGATGGTTATGTTTAGTGCTACATGGCCTCTACAAGTTAATCAATTGGCTCAAGAATTCATGGATCCTGACCCAGTAAAGGTTGTTGTAGGTTCAGAGGATTTGGCTGCCAATCATGATGTCATGCAAATAGTTGAGGTTTTGGATGATCGATCACGTGATAATCGTTTAGTGGCTCTGCTTGAAAAATACCATAAATCTCAAAGGAACAGAGTATTAGTTTTTGTCTTGTACAAGAATGAAGCTTCACGAGTTGAAAACATGCTTCAGAGAAGGGGATGGAAGGCTGTTTCTATACACGGTGATAAAGCACAAACTGAACGCACAAAAGCACTGTCATTATTTAAAAGCGGAAGCTCTCCATTAATGATAGCTACTGATGTAGCCGCTCGAGGTTTGGATATTCCGGATGTAGAAGTAGTAATAAACTATAGCTTTCCTCTCACAACGGAAGATTATGTCCATAGAATTGGGAGGACTGGACGGGCTGGTAAAAAGGGTGTTGCTCACACATTCTTCATGCAACAAAACAAGGGACTTGCTGGGGAGCTGGTAAATGTTCTCCGTGAAGCTAAGCAAGTTGTACCTGATGCACTTCTGAAATTCGGTACTCATGTGAAGAAAAAGGAATCCAAGCTCTATGGAGCGCACTTCAAGGAAATTACGGCAGATGCCCCCAAGTCCACGAAGATTACATTCAATGATTCCGACGAAGACTGA

Protein sequence

MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTDSEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVEAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGVDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMFSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYHKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDED

Homology

[Close]

BLAST of Carg25329 vs. NCBI nr
Match: KAG7011359.1 (DEAD-box ATP-dependent RNA helicase 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1029.2 bits (2660), Expect = 1.2e-296
Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 0


Query: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60
           MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD
Sbjct: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60

Query: 61  SEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVE 120
           SEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVE
Sbjct: 61  SEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVE 120

Query: 121 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180
           AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR
Sbjct: 121 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180

Query: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 240
           KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV
Sbjct: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 240

Query: 241 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 300
           DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF
Sbjct: 241 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 300

Query: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 360
           SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH
Sbjct: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 360

Query: 361 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 420
           KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA
Sbjct: 361 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 420

Query: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480
           TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV
Sbjct: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480

Query: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDED 535
           NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDED
Sbjct: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDED 534

[Close]

BLAST of Carg25329 vs. NCBI nr
Match: XP_023511461.1 (DEAD-box ATP-dependent RNA helicase 5-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1020.8 bits (2638), Expect = 4.3e-294
Identity = 529/534 (99.06%), Postives = 532/534 (99.63%), Query Frame = 0


Query: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60
           MVGKLREDA VSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD
Sbjct: 1   MVGKLREDAAVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60

Query: 61  SEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVE 120
           SEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTD SVVVTGKGVKEAGFVPLKSFVE
Sbjct: 61  SEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVE 120

Query: 121 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180
           AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR
Sbjct: 121 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180

Query: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 240
           KGKMPKGR+PLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV
Sbjct: 181 KGKMPKGRTPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 240

Query: 241 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 300
           DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF
Sbjct: 241 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 300

Query: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 360
           SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH
Sbjct: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 360

Query: 361 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 420
           KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA
Sbjct: 361 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 420

Query: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480
           TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV
Sbjct: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480

Query: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDED 535
           NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSD++
Sbjct: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDDE 534

[Close]

BLAST of Carg25329 vs. NCBI nr
Match: XP_022963969.1 (DEAD-box ATP-dependent RNA helicase 5-like [Cucurbita moschata])

HSP 1 Score: 1020.4 bits (2637), Expect = 5.7e-294
Identity = 529/534 (99.06%), Postives = 532/534 (99.63%), Query Frame = 0


Query: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60
           MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD
Sbjct: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60

Query: 61  SEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVE 120
           SEIHKKKKKHKKSKDENVSIN SDEKEEAKVDENSTD SVVVTGKGVKEAGFVPLKSFVE
Sbjct: 61  SEIHKKKKKHKKSKDENVSINTSDEKEEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVE 120

Query: 121 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180
           AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR
Sbjct: 121 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180

Query: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 240
           KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV
Sbjct: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 240

Query: 241 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 300
           DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF
Sbjct: 241 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 300

Query: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 360
           SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH
Sbjct: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 360

Query: 361 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 420
           KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA
Sbjct: 361 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 420

Query: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480
           TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV
Sbjct: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480

Query: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDED 535
           NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITF+DSD++
Sbjct: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFDDSDDE 534

[Close]

BLAST of Carg25329 vs. NCBI nr
Match: XP_023511462.1 (DEAD-box ATP-dependent RNA helicase 5-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1011.9 bits (2615), Expect = 2.0e-291
Identity = 527/534 (98.69%), Postives = 530/534 (99.25%), Query Frame = 0


Query: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60
           MVGKLREDA VSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD
Sbjct: 1   MVGKLREDAAVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60

Query: 61  SEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVE 120
           SEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTD SVVVTGKGVKEAGFVPLKSFVE
Sbjct: 61  SEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVE 120

Query: 121 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180
           AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR
Sbjct: 121 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180

Query: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 240
           KGKMPKGR+PLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV
Sbjct: 181 KGKMPKGRTPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 240

Query: 241 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 300
           DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF
Sbjct: 241 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 300

Query: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 360
           SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH
Sbjct: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 360

Query: 361 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 420
           KSQ  RVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA
Sbjct: 361 KSQ--RVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 420

Query: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480
           TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV
Sbjct: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480

Query: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDED 535
           NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSD++
Sbjct: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDDE 532

[Close]

BLAST of Carg25329 vs. NCBI nr
Match: XP_022967233.1 (DEAD-box ATP-dependent RNA helicase 5-like [Cucurbita maxima])

HSP 1 Score: 1002.3 bits (2590), Expect = 1.6e-288
Identity = 523/535 (97.76%), Postives = 529/535 (98.88%), Query Frame = 0


Query: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKK-KKNRDKDSGCQEENEVSPKRKLQEGT 60
           MVGKLREDATVSEPVAQ AFEKCDT+AEKKKKK KKNRDKDSGCQEENEVSPKRK+QEGT
Sbjct: 1   MVGKLREDATVSEPVAQ-AFEKCDTRAEKKKKKRKKNRDKDSGCQEENEVSPKRKVQEGT 60

Query: 61  DSEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFV 120
           DSE HKKKKKHKKSKDENVSINASDEK+E KVDENSTD SVVVTGKGVKEAGFVPLKSFV
Sbjct: 61  DSEHHKKKKKHKKSKDENVSINASDEKQEPKVDENSTDGSVVVTGKGVKEAGFVPLKSFV 120

Query: 121 EAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNK 180
           EAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNK
Sbjct: 121 EAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNK 180

Query: 181 RKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSG 240
           RKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQIS LKSG
Sbjct: 181 RKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSG 240

Query: 241 VDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVM 300
           VDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVM
Sbjct: 241 VDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVM 300

Query: 301 FSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKY 360
           FSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKY
Sbjct: 301 FSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKY 360

Query: 361 HKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMI 420
           HKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMI
Sbjct: 361 HKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMI 420

Query: 421 ATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGEL 480
           ATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGEL
Sbjct: 421 ATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGEL 480

Query: 481 VNVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDED 535
           VNVLREAKQVVPDAL+KFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSD++
Sbjct: 481 VNVLREAKQVVPDALIKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDDE 534

[Close]

BLAST of Carg25329 vs. ExPASy Swiss-Prot
Match: Q6YS30 (DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0301200 PE=2 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 2.8e-195
Identity = 365/511 (71.43%), Postives = 408/511 (79.84%), Query Frame = 0


Query: 24  DTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTDSEIHKKKKKHKKSKDENVSINAS 83
           D   + KK+KK  +DK    + E EV         +  E  K  KK +   D        
Sbjct: 12  DVSRKSKKEKKSKKDKKRKLEAEAEVVVVEAAAATSTDEATKSSKKKRAKGD-------L 71

Query: 84  DEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVEAGLPDAVLECCRTFKSPSPIQSH 143
            + EEA   EN   + V VTGKG  +A + PL SF    LP  VL+CC+ F+ PSPIQ++
Sbjct: 72  GQGEEA---ENGGGKVVAVTGKGSADAKYAPLSSFAATALPPQVLDCCKGFERPSPIQAY 131

Query: 144 AWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQ 203
           AWP+LL GRDFIGIAATGSGKT+AFGVP +MHV  K   K  K   P  LVLSPTRELAQ
Sbjct: 132 AWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRVLVLSPTRELAQ 191

Query: 204 QISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGVDIVIGTPGRLKDLMEMEVCRLSE 263
           QI+ VL  AG PCG++S CLYGG SKG QIS+LKSGVDIVIGTPGR+KDL+EM +CRL++
Sbjct: 192 QIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLND 251

Query: 264 VSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMFSATWPLQVNQLAQEFMDPDPVKV 323
           VSFVVLDEADRMLDMGFEPEVR ILSQT   RQ VMFSATWP  V+QLAQEFMDP+P+KV
Sbjct: 252 VSFVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFSATWPPAVHQLAQEFMDPNPIKV 311

Query: 324 VVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYHKSQRNRVLVFVLYKNEASRVENM 383
           V+GSEDLAANHDVMQIVEVLDDRSRD+RLVALL+KYHK+QRNRVLVFVLYK EA+RVE M
Sbjct: 312 VIGSEDLAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQRNRVLVFVLYKREATRVETM 371

Query: 384 LQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIATDVAARGLDIPDVEVVINYSFPL 443
           LQRRGW AVS+HGDKAQ +RTKALSLFK GS PLMIATDVA+RGLDIPDVEVVINYS+PL
Sbjct: 372 LQRRGWSAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDVASRGLDIPDVEVVINYSYPL 431

Query: 444 TTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAKQVVPDALLKFGTHVKK 503
           TTEDYVHRIGRTGRAGKKGVAHTFF Q+NKGLAGELVNVLREA QVVP AL KFGTHVKK
Sbjct: 432 TTEDYVHRIGRTGRAGKKGVAHTFFTQENKGLAGELVNVLREAGQVVPPALTKFGTHVKK 491

Query: 504 KESKLYGAHFKEITADAPKSTKITFNDSDED 535
           KES++YG+HFKEI ADAPKSTKITF DSDED
Sbjct: 492 KESQIYGSHFKEIKADAPKSTKITFGDSDED 512

[Close]

BLAST of Carg25329 vs. ExPASy Swiss-Prot
Match: Q9C551 (DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana OX=3702 GN=RH5 PE=1 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 1.4e-194
Identity = 364/538 (67.66%), Postives = 434/538 (80.67%), Query Frame = 0


Query: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60
           M G+ +E     EP+A E+      K +KK KK K+ +++   +E  +       +E ++
Sbjct: 1   MAGQKQELPVSGEPLAVES--PMTNKKKKKSKKNKHTEENHEVEEVPQEVTNGVEEELSN 60

Query: 61  SEIHKKKKKHKKSKDENVSINASDEKEEAK--VDENSTDRSVVVTGKGVKEAGFVPLKSF 120
            E  KK+K+ +K  ++N   +  ++K EA+   +  S  + VVVTGKGV+EA +  LK+F
Sbjct: 61  KEKKKKRKREEKESEKNKKKDVPEKKLEAEDLGEGESEQQKVVVTGKGVEEAKYAALKTF 120

Query: 121 VEAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVL- 180
            E+ LP+ VL+CC+TF+ PSPIQSH WPFLL GRD IGIA TGSGKTLAFG+P IMHVL 
Sbjct: 121 AESNLPENVLDCCKTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLK 180

Query: 181 -NKRKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSL 240
            NK+ G   K  +P CLVLSPTRELA QIS VL+ AGEPCG+ S C+YGG SKG QIS++
Sbjct: 181 KNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAI 240

Query: 241 KSGVDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQ 300
           +SGVDIVIGTPGRL+DL+E  V RLS+VSFVVLDEADRMLDMGFE  VRFILS T K RQ
Sbjct: 241 RSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQ 300

Query: 301 MVMFSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALL 360
           MVMFSATWPL V++LAQEFMDP+P+KV++GS DLAANHDVMQI+EVLD+R+RD RL+ALL
Sbjct: 301 MVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALL 360

Query: 361 EKYHKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSP 420
           EKYHKSQ+NRVLVF LYK EA R+E  LQ+RGWKAVSIHG+KAQ+ERT++LSLFK GS P
Sbjct: 361 EKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCP 420

Query: 421 LMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLA 480
           L++ATDVAARGLDIPDVEVVINY+FPLTTEDYVHRIGRTGRAGKKGVAHTFF   NKGLA
Sbjct: 421 LLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLA 480

Query: 481 GELVNVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDED 535
           GELVNVLREA QVVP  LLKFGTHVKKKESKLYGAHFKEI ADAPK+TKITF++SD++
Sbjct: 481 GELVNVLREAGQVVPADLLKFGTHVKKKESKLYGAHFKEIAADAPKATKITFDNSDDE 536

[Close]

BLAST of Carg25329 vs. ExPASy Swiss-Prot
Match: A5E1W4 (ATP-dependent RNA helicase DBP3 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP3 PE=3 SV=2)

HSP 1 Score: 395.2 bits (1014), Expect = 1.2e-108
Identity = 233/515 (45.24%), Postives = 333/515 (64.66%), Query Frame = 0


Query: 17  QEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTDSEIHKKKKKHKKSKDE 76
           QE  EK D K +K KK+KK++ +    +E+N+ S + + ++ + S +        +S   
Sbjct: 30  QEKKEKKDKKEKKDKKEKKDKKEKKDKKEKNKESKEAEARDDSGSNVQASSSSSTESTSY 89

Query: 77  N-VSINASDEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVEAGLPDAVLECCRTFK 136
             V  +   +  +++VD+  TD  V V  +  +   + P+ SF +  L   V      F 
Sbjct: 90  GYVQSSKVKDVPQSEVDKFLTDNEVTV--EDPQHLHYRPILSFDQIKLQKDVSSKLTKFP 149

Query: 137 SPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVL 196
            P+PIQS +WPFLL G+D +G+A TGSGKT AFGVP I +++  +     K  S LC  +
Sbjct: 150 KPTPIQSVSWPFLLDGKDVVGVAETGSGKTFAFGVPAINNIITSKN----KDLSVLC--I 209

Query: 197 SPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGVDIVIGTPGRLKDLME 256
           SPTRELA QI   L++      V+   +YGGVSK  QI  +++G ++V+ TPGRL DL+ 
Sbjct: 210 SPTRELALQIYDNLEDLTRGTDVSCVAIYGGVSKDDQIKKIRNGANVVVATPGRLVDLIN 269

Query: 257 MEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQT-CKERQMVMFSATWPLQVNQLAQE 316
                LS ++++VLDEADRML+ GFE +++ I+  T  + RQ +MF+ATWP +V +LA  
Sbjct: 270 DGAVDLSSINYLVLDEADRMLEKGFEEDIKLIIGSTPAQGRQTLMFTATWPKEVRELANN 329

Query: 317 FMDPDPVKVVVGSED-LAANHDVMQIVEVLDDR-SRDNRLVALLEKYHKSQR--NRVLVF 376
           FM+  PVKV +G  D L+AN  + QIVEVLDD+  ++ +L+ LL+KY  +    N++LVF
Sbjct: 330 FMN-QPVKVTIGDRDELSANKRITQIVEVLDDKFQKEKKLINLLQKYQNTGNGDNKILVF 389

Query: 377 VLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIATDVAARGLDI 436
            LYK EASR+E++L R  +K  +IHGD +Q +RT+AL  FKSG   L++ATDVAARGLDI
Sbjct: 390 ALYKKEASRIESLLHRNKFKVAAIHGDLSQQQRTQALQSFKSGECNLLLATDVAARGLDI 449

Query: 437 PDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAKQVV 496
           P+V+ VIN +FPLT EDYVHR+GRTGRAG+ G+AHTFF +  K L+G L N+LR A Q V
Sbjct: 450 PNVKYVINLTFPLTIEDYVHRLGRTGRAGQTGIAHTFFTEDEKHLSGALCNILRGANQPV 509

Query: 497 PDALLKFGTHVKKKESKLYGAHFKEITADAPKSTK 526
           P+ALLK+G H KKK   +YGA +K++  D P  +K
Sbjct: 510 PEALLKYGGHTKKKTHSVYGAFYKDV--DMPIDSK 533

[Close]

BLAST of Carg25329 vs. ExPASy Swiss-Prot
Match: A5DAC8 (ATP-dependent RNA helicase DBP3 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP3 PE=3 SV=2)

HSP 1 Score: 394.8 bits (1013), Expect = 1.5e-108
Identity = 238/517 (46.03%), Postives = 324/517 (62.67%), Query Frame = 0


Query: 21  EKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTDSEIHKKKKKHKKSKDENVSI 80
           EK + K +K+KK+KK + +    +E+ E   K + +E  + +  K+K +  +  D  VS 
Sbjct: 27  EKKEKKEKKEKKEKKEKKEKKEKKEKKEKKEKNEKKEKKEKKAKKEKTEETEETDSTVST 86

Query: 81  NASDEK-----------EEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVEAGLPDAVLE 140
            +S               ++++DE      V V  +   + GF P+ SF    L   +  
Sbjct: 87  VSSSSSGYTQAAELTALPQSEIDEFLQTNEVTV--EDPHKLGFRPILSFDHVQLQSKIAP 146

Query: 141 CCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRS 200
               F  P+PIQS +WP+LL+G D +G+A TGSGKT AFGVP I +++   K    KG  
Sbjct: 147 IVTKFPKPTPIQSASWPYLLNGDDVVGVAETGSGKTFAFGVPAINNIITDNK----KGLR 206

Query: 201 PLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGVDIVIGTPGR 260
            LC  +SPTRELA QI   L    + CG+T   +YGGV K  QI ++K+   +V+ TPGR
Sbjct: 207 VLC--ISPTRELALQIYDNLTMLTKNCGLTCVAIYGGVPKDQQIKAVKT-ASVVVATPGR 266

Query: 261 LKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMFSATWPLQVN 320
           L DL+      LS + ++VLDEADRML+ GFE +++ I+  T K+RQ +MF+ATWP +V 
Sbjct: 267 LVDLLNDGAVDLSTIDYLVLDEADRMLEKGFEEDIKNIIGCTNKQRQTLMFTATWPKEVR 326

Query: 321 QLAQEFMDPDPVKVVVGSED-LAANHDVMQIVEVLDDRSRDNRLVALLEKYHKSQRNRVL 380
           +LA  FM+   VKV +G+ D LAAN  + Q VEV+D R ++ RL+ LL +Y   Q  ++L
Sbjct: 327 ELAATFMN-KAVKVSIGNRDELAANKRITQTVEVMDPRDKERRLLQLLRQYGSDQ--KIL 386

Query: 381 VFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIATDVAARGL 440
           VF LYK EA+RVE ML+R G+   +IHGD +Q +RT AL  FK G S L++ATDVAARGL
Sbjct: 387 VFALYKKEATRVEAMLRRSGFNVAAIHGDLSQQQRTSALDSFKRGDSNLLLATDVAARGL 446

Query: 441 DIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAKQ 500
           DIP+V+VVIN +FPLT EDYVHRIGRTGRAG+ G+AHT F +  K L+G L+NVLR A Q
Sbjct: 447 DIPNVKVVINLTFPLTVEDYVHRIGRTGRAGQTGIAHTLFTEHEKHLSGALMNVLRGAGQ 506

Query: 501 VVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTK 526
            VPD LLKFG H KKK    YGA FK++  D  K+ K
Sbjct: 507 PVPDELLKFGGHTKKKSHSAYGAFFKDV--DMTKTAK 529

[Close]

BLAST of Carg25329 vs. ExPASy Swiss-Prot
Match: Q6CT46 (ATP-dependent RNA helicase DBP3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP3 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 2.6e-108
Identity = 240/510 (47.06%), Postives = 324/510 (63.53%), Query Frame = 0


Query: 24  DTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTDSEIHKKKKKHKKSKDENVSINAS 83
           + K++KK KK K   KD   +++ +   ++K          KK+KK KKS+ E+ + +AS
Sbjct: 17  ELKSKKKLKKDKKDKKDKKDKKDKKDKKEKK---------EKKEKKDKKSETESFAASAS 76

Query: 84  DEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVEAGLPDAVLECCRTFKSPSPIQSH 143
               +  + EN       VT      +  VP   F +    D + +    F  P+PIQ+ 
Sbjct: 77  QSDIDEFLKENE------VTVSDPSGSNIVPYLDFSQVSFIDQIQKEISKFPKPTPIQAV 136

Query: 144 AWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQ 203
           +WP+LL G+D IGIA TGSGKT AFGVP I +++        K  S   LV+SPTRELA 
Sbjct: 137 SWPYLLAGKDVIGIAETGSGKTFAFGVPAINNIVTSG----DKSSSVKVLVISPTRELAS 196

Query: 204 QISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGVDIVIGTPGRLKDLMEMEVCRLSE 263
           QI   L    + CG+ S C+YGGV K  Q   L+    +V+ TPGRL DL+E     LS 
Sbjct: 197 QIYDNLIVLTDACGLRSCCVYGGVPKDQQREDLRRS-QVVVATPGRLLDLIEEGSVDLSH 256

Query: 264 VSFVVLDEADRMLDMGFEPEVRFILSQT-CKERQMVMFSATWPLQVNQLAQEFMDPDPVK 323
           V+++VLDEADRML+ GFE +++ I+ QT    RQ +MF+ATWP +V +LA  FM  +PVK
Sbjct: 257 VNYLVLDEADRMLEKGFEEDIKKIIRQTRSTSRQTLMFTATWPKEVRELASSFMS-EPVK 316

Query: 324 VVVGSED-LAANHDVMQIVEVLDDRSRDNRLVALLEKYHK--SQRNRVLVFVLYKNEASR 383
           V +G+ D L+AN  + QIVEV+D   ++ +L+ LL+KYH   ++ ++VL+F LYK EASR
Sbjct: 317 VSIGNRDELSANKRITQIVEVVDPFRKEKKLLELLKKYHSGPTKNDKVLIFALYKKEASR 376

Query: 384 VENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIATDVAARGLDIPDVEVVINY 443
           VE  L+  G+   +IHGD +Q +RT+AL+ FK+G   L++ATDVAARGLDIP+V+ VIN 
Sbjct: 377 VERNLKYNGYDVAAIHGDLSQQQRTQALNEFKAGKCNLLLATDVAARGLDIPNVKTVINL 436

Query: 444 SFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAKQVVPDALLKFGT 503
           +FPLT EDYVHRIGRTGRAG+ G AHT F +Q K LAG LVNVL  A Q VP+ L KFGT
Sbjct: 437 TFPLTVEDYVHRIGRTGRAGQYGTAHTLFTEQEKHLAGALVNVLNGAGQPVPEELKKFGT 496

Query: 504 HVKKKESKLYGAHFKEITADAPKSTKITFN 530
           H KKKE   YGA FK++   + K  KITF+
Sbjct: 497 HTKKKEHSAYGAFFKDVDL-SKKPKKITFD 504

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BLAST of Carg25329 vs. ExPASy TrEMBL
Match: A0A6J1HLR1 (DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita moschata OX=3662 GN=LOC111464108 PE=3 SV=1)

HSP 1 Score: 1020.4 bits (2637), Expect = 2.7e-294
Identity = 529/534 (99.06%), Postives = 532/534 (99.63%), Query Frame = 0


Query: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60
           MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD
Sbjct: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60

Query: 61  SEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVE 120
           SEIHKKKKKHKKSKDENVSIN SDEKEEAKVDENSTD SVVVTGKGVKEAGFVPLKSFVE
Sbjct: 61  SEIHKKKKKHKKSKDENVSINTSDEKEEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVE 120

Query: 121 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180
           AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR
Sbjct: 121 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180

Query: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 240
           KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV
Sbjct: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 240

Query: 241 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 300
           DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF
Sbjct: 241 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 300

Query: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 360
           SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH
Sbjct: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 360

Query: 361 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 420
           KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA
Sbjct: 361 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 420

Query: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480
           TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV
Sbjct: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480

Query: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDED 535
           NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITF+DSD++
Sbjct: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFDDSDDE 534

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BLAST of Carg25329 vs. ExPASy TrEMBL
Match: A0A6J1HUH8 (DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita maxima OX=3661 GN=LOC111466827 PE=3 SV=1)

HSP 1 Score: 1002.3 bits (2590), Expect = 7.7e-289
Identity = 523/535 (97.76%), Postives = 529/535 (98.88%), Query Frame = 0


Query: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKK-KKNRDKDSGCQEENEVSPKRKLQEGT 60
           MVGKLREDATVSEPVAQ AFEKCDT+AEKKKKK KKNRDKDSGCQEENEVSPKRK+QEGT
Sbjct: 1   MVGKLREDATVSEPVAQ-AFEKCDTRAEKKKKKRKKNRDKDSGCQEENEVSPKRKVQEGT 60

Query: 61  DSEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFV 120
           DSE HKKKKKHKKSKDENVSINASDEK+E KVDENSTD SVVVTGKGVKEAGFVPLKSFV
Sbjct: 61  DSEHHKKKKKHKKSKDENVSINASDEKQEPKVDENSTDGSVVVTGKGVKEAGFVPLKSFV 120

Query: 121 EAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNK 180
           EAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNK
Sbjct: 121 EAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNK 180

Query: 181 RKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSG 240
           RKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQIS LKSG
Sbjct: 181 RKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSG 240

Query: 241 VDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVM 300
           VDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVM
Sbjct: 241 VDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVM 300

Query: 301 FSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKY 360
           FSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKY
Sbjct: 301 FSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKY 360

Query: 361 HKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMI 420
           HKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMI
Sbjct: 361 HKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMI 420

Query: 421 ATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGEL 480
           ATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGEL
Sbjct: 421 ATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGEL 480

Query: 481 VNVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDED 535
           VNVLREAKQVVPDAL+KFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSD++
Sbjct: 481 VNVLREAKQVVPDALIKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDDE 534

[Close]

BLAST of Carg25329 vs. ExPASy TrEMBL
Match: A0A5A7VL81 (DEAD-box ATP-dependent RNA helicase 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00600 PE=3 SV=1)

HSP 1 Score: 937.6 bits (2422), Expect = 2.3e-269
Identity = 491/534 (91.95%), Postives = 508/534 (95.13%), Query Frame = 0


Query: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60
           MVGKL+ED+T+SE +AQ+ FEK D+KAEKKKKKKK RD DS C EENEVSPK KLQEGTD
Sbjct: 1   MVGKLKEDSTISEQLAQKPFEKPDSKAEKKKKKKK-RDGDSVCLEENEVSPKTKLQEGTD 60

Query: 61  SEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVE 120
           SE+HKKKKKHKKSKD ++ I  SDEK+EAKVDENSTD SVVVTGK VKEA FVPLKSFVE
Sbjct: 61  SELHKKKKKHKKSKDVSLDIKTSDEKDEAKVDENSTDGSVVVTGKDVKEAKFVPLKSFVE 120

Query: 121 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180
           AGLPD VLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVL KR
Sbjct: 121 AGLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLKKR 180

Query: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 240
           KGKMPKGRSPLCLVLSPTRELAQQISSVL+NAG+PCGV STCLYGGVSKGSQIS LKSGV
Sbjct: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLENAGKPCGVMSTCLYGGVSKGSQISCLKSGV 240

Query: 241 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 300
           DIVIGTPGRLKDLMEMEVCRL+EVSFVVLDEADRMLDMGFEPEVR ILSQTC ERQMVMF
Sbjct: 241 DIVIGTPGRLKDLMEMEVCRLAEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMF 300

Query: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 360
           SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDR RD+RL ALLEKYH
Sbjct: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRLRDDRLGALLEKYH 360

Query: 361 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 420
           KSQRNRVLVFVLYKNEA+RVE MLQRRGWKAVSIHGDKAQTERTKALSLFKSGS PLMIA
Sbjct: 361 KSQRNRVLVFVLYKNEAARVERMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMIA 420

Query: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480
           TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV
Sbjct: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480

Query: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDED 535
           NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKS KITFNDSD++
Sbjct: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSKKITFNDSDDE 533

[Close]

BLAST of Carg25329 vs. ExPASy TrEMBL
Match: A0A1S3CNI1 (DEAD-box ATP-dependent RNA helicase 5 OS=Cucumis melo OX=3656 GN=LOC103502795 PE=3 SV=1)

HSP 1 Score: 937.6 bits (2422), Expect = 2.3e-269
Identity = 491/534 (91.95%), Postives = 508/534 (95.13%), Query Frame = 0


Query: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60
           MVGKL+ED+T+SE +AQ+ FEK D+KAEKKKKKKK RD DS C EENEVSPK KLQEGTD
Sbjct: 1   MVGKLKEDSTISEQLAQKPFEKPDSKAEKKKKKKK-RDGDSVCLEENEVSPKTKLQEGTD 60

Query: 61  SEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVE 120
           SE+HKKKKKHKKSKD ++ I  SDEK+EAKVDENSTD SVVVTGK VKEA FVPLKSFVE
Sbjct: 61  SELHKKKKKHKKSKDVSLDIKTSDEKDEAKVDENSTDGSVVVTGKDVKEAKFVPLKSFVE 120

Query: 121 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180
           AGLPD VLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVL KR
Sbjct: 121 AGLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLKKR 180

Query: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 240
           KGKMPKGRSPLCLVLSPTRELAQQISSVL+NAG+PCGV STCLYGGVSKGSQIS LKSGV
Sbjct: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLENAGKPCGVMSTCLYGGVSKGSQISCLKSGV 240

Query: 241 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 300
           DIVIGTPGRLKDLMEMEVCRL+EVSFVVLDEADRMLDMGFEPEVR ILSQTC ERQMVMF
Sbjct: 241 DIVIGTPGRLKDLMEMEVCRLAEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMF 300

Query: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 360
           SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDR RD+RL ALLEKYH
Sbjct: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRLRDDRLGALLEKYH 360

Query: 361 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 420
           KSQRNRVLVFVLYKNEA+RVE MLQRRGWKAVSIHGDKAQTERTKALSLFKSGS PLMIA
Sbjct: 361 KSQRNRVLVFVLYKNEAARVERMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMIA 420

Query: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480
           TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV
Sbjct: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480

Query: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDED 535
           NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKS KITFNDSD++
Sbjct: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSKKITFNDSDDE 533

[Close]

BLAST of Carg25329 vs. ExPASy TrEMBL
Match: A0A6J1ET43 (DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437470 PE=3 SV=1)

HSP 1 Score: 934.1 bits (2413), Expect = 2.6e-268
Identity = 486/534 (91.01%), Postives = 504/534 (94.38%), Query Frame = 0


Query: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60
           MVGKL ED+TVSEPVAQE F K DTK EKKK     RD++SGCQE++EVS ++ +  GTD
Sbjct: 1   MVGKLEEDSTVSEPVAQEVFVKSDTKTEKKK-----RDRESGCQEKDEVSHEKNVLVGTD 60

Query: 61  SEIHKKKKKHKKSKDENVSINASDEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVE 120
           SE+HKKKKKHKK KDENVSI  SDEKE  KV+ENSTD SVVVTGKGVKE  F PLKSF E
Sbjct: 61  SELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKERKFAPLKSFAE 120

Query: 121 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180
           AGLPD VLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR
Sbjct: 121 AGLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180

Query: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 240
           KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQIS LKSGV
Sbjct: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGV 240

Query: 241 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 300
           DIVIGTPGRLKDLMEME+CRLSEVSFVVLDEADRMLDMGFEPEVR ILSQTC ERQMVMF
Sbjct: 241 DIVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMF 300

Query: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 360
           SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDV+QIVEVLDDR+RD+RLVALLEKYH
Sbjct: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVVQIVEVLDDRARDDRLVALLEKYH 360

Query: 361 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIA 420
           KSQRNRVLVFVLYKNEA+RVE MLQRRGWKAVSIHGDKAQTERTKALSLFKSGS PLMIA
Sbjct: 361 KSQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMIA 420

Query: 421 TDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480
           TDVAARGLDIP+VEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV
Sbjct: 421 TDVAARGLDIPEVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELV 480

Query: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDED 535
           NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSD++
Sbjct: 481 NVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDDE 529

[Close]

BLAST of Carg25329 vs. TAIR 10
Match: AT1G31970.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 680.6 bits (1755), Expect = 9.9e-196
Identity = 364/538 (67.66%), Postives = 434/538 (80.67%), Query Frame = 0


Query: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60
           M G+ +E     EP+A E+      K +KK KK K+ +++   +E  +       +E ++
Sbjct: 1   MAGQKQELPVSGEPLAVES--PMTNKKKKKSKKNKHTEENHEVEEVPQEVTNGVEEELSN 60

Query: 61  SEIHKKKKKHKKSKDENVSINASDEKEEAK--VDENSTDRSVVVTGKGVKEAGFVPLKSF 120
            E  KK+K+ +K  ++N   +  ++K EA+   +  S  + VVVTGKGV+EA +  LK+F
Sbjct: 61  KEKKKKRKREEKESEKNKKKDVPEKKLEAEDLGEGESEQQKVVVTGKGVEEAKYAALKTF 120

Query: 121 VEAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVL- 180
            E+ LP+ VL+CC+TF+ PSPIQSH WPFLL GRD IGIA TGSGKTLAFG+P IMHVL 
Sbjct: 121 AESNLPENVLDCCKTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLK 180

Query: 181 -NKRKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSL 240
            NK+ G   K  +P CLVLSPTRELA QIS VL+ AGEPCG+ S C+YGG SKG QIS++
Sbjct: 181 KNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAI 240

Query: 241 KSGVDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQ 300
           +SGVDIVIGTPGRL+DL+E  V RLS+VSFVVLDEADRMLDMGFE  VRFILS T K RQ
Sbjct: 241 RSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQ 300

Query: 301 MVMFSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALL 360
           MVMFSATWPL V++LAQEFMDP+P+KV++GS DLAANHDVMQI+EVLD+R+RD RL+ALL
Sbjct: 301 MVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALL 360

Query: 361 EKYHKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSP 420
           EKYHKSQ+NRVLVF LYK EA R+E  LQ+RGWKAVSIHG+KAQ+ERT++LSLFK GS P
Sbjct: 361 EKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCP 420

Query: 421 LMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLA 480
           L++ATDVAARGLDIPDVEVVINY+FPLTTEDYVHRIGRTGRAGKKGVAHTFF   NKGLA
Sbjct: 421 LLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLA 480

Query: 481 GELVNVLREAKQVVPDALLKFGTHVKKKESKLYGAHFKEITADAPKSTKITFNDSDED 535
           GELVNVLREA QVVP  LLKFGTHVKKKESKLYGAHFKEI ADAPK+TKITF++SD++
Sbjct: 481 GELVNVLREAGQVVPADLLKFGTHVKKKESKLYGAHFKEIAADAPKATKITFDNSDDE 536

[Close]

BLAST of Carg25329 vs. TAIR 10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 377.9 bits (969), Expect = 1.4e-104
Identity = 202/421 (47.98%), Postives = 279/421 (66.27%), Query Frame = 0


Query: 76  ENVSINASDEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVEAGLPDAVLECCRT-- 135
           E+ ++ A  E++ A      T+R + V G+ V +    P+K F +A  PD +LE      
Sbjct: 132 ESPTVQAMTEQDVAMY---RTERDISVEGRDVPK----PMKMFQDANFPDNILEAIAKLG 191

Query: 136 FKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCL 195
           F  P+PIQ+  WP  L GRD IGIA TGSGKTLA+ +P ++HV    + ++ +   P+ L
Sbjct: 192 FTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHV--SAQPRLGQDDGPIVL 251

Query: 196 VLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGVDIVIGTPGRLKDL 255
           +L+PTRELA QI    +  G   GV STC+YGG  KG QI  L+ GV+IVI TPGRL D+
Sbjct: 252 ILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDM 311

Query: 256 MEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMFSATWPLQVNQLAQ 315
           +E +   L  V+++VLDEADRMLDMGFEP++R I+SQ   +RQ +++SATWP +V  LA+
Sbjct: 312 LECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLAR 371

Query: 316 EFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYHKSQRNRVLVFVLY 375
           +F+  DP K ++GS DL AN  + Q++E++    + NRL+ LL++      +++L+FV  
Sbjct: 372 QFL-RDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQL--MDGSKILIFVET 431

Query: 376 KNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIATDVAARGLDIPDV 435
           K    +V   L+  GW A++IHGDK Q+ER + L+ FKSG SP+M ATDVAARGLD+ D+
Sbjct: 432 KRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDI 491

Query: 436 EVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAKQVVPDA 495
           + V+NY FP T EDY+HRIGRTGRAG KG+A TFF   N   A ELV +L+EA QVVP  
Sbjct: 492 KCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPT 540

[Close]

BLAST of Carg25329 vs. TAIR 10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 374.8 bits (961), Expect = 1.2e-103
Identity = 204/413 (49.39%), Postives = 270/413 (65.38%), Query Frame = 0


Query: 88  EAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVEAGLPDAVLECCRT--FKSPSPIQSHAW 147
           + +V+E    R + V GK + +    P+KSF + G PD VLE  +   F  P+PIQS  W
Sbjct: 75  DTEVEEYRKLREITVEGKDIPK----PVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGW 134

Query: 148 PFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQQI 207
           P  + GRD IGIA TGSGKTL++ +P I+HV    +  +  G  P+ LVL+PTRELA QI
Sbjct: 135 PMAMKGRDLIGIAETGSGKTLSYLLPAIVHV--NAQPMLAHGDGPIVLVLAPTRELAVQI 194

Query: 208 SSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGVDIVIGTPGRLKDLMEMEVCRLSEVS 267
                  G    + +TC+YGGV KG Q+  L+ GV+IVI TPGRL D+ME     L  V+
Sbjct: 195 QQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVT 254

Query: 268 FVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMFSATWPLQVNQLAQEFMDPDPVKVVV 327
           ++VLDEADRMLDMGF+P++R I+S    +RQ + +SATWP +V QL+++F+  +P KV++
Sbjct: 255 YLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFL-YNPYKVII 314

Query: 328 GSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYHKSQRNRVLVFVLYKNEASRVENMLQ 387
           GS DL AN  + QIV+V+ +  + N+LV LLE       +R+LVF+  K    ++   L+
Sbjct: 315 GSSDLKANRAIRQIVDVISESQKYNKLVKLLEDI--MDGSRILVFLDTKKGCDQITRQLR 374

Query: 388 RRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIATDVAARGLDIPDVEVVINYSFPLTT 447
             GW A+SIHGDK+Q ER   LS F+SG SP+M ATDVAARGLD+ DV+ VINY FP + 
Sbjct: 375 MDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSL 434

Query: 448 EDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAKQVVPDALLKFG 499
           EDYVHRIGRTGRAG KG A+TFF   N   A EL N+L+EA Q V   L   G
Sbjct: 435 EDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKVSPELASMG 478

[Close]

BLAST of Carg25329 vs. TAIR 10
Match: AT5G14610.2 (DEAD box RNA helicase family protein )

HSP 1 Score: 323.2 bits (827), Expect = 4.0e-88
Identity = 171/389 (43.96%), Postives = 249/389 (64.01%), Query Frame = 0


Query: 114 PLKSFVEAGLPDAVLE--CCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVP 173
           PL SF   GLP+ +L       F +PSPIQ+ +WP  +  RD + IA TGSGKTL + +P
Sbjct: 159 PLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIP 218

Query: 174 GIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGS 233
           G MH+   ++        P  LVLSPTRELA QI       G+   ++  CLYGG  KG 
Sbjct: 219 GFMHL---QRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGP 278

Query: 234 QISSLKSGVDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQT 293
           Q+  ++ GVDIV+ TPGRL D++EM+   L +VS++VLDEADRMLDMGFEP++R I+++ 
Sbjct: 279 QLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEV 338

Query: 294 CKERQMVMFSATWPLQVNQLAQEFMDPDPVKVVVGS-EDLAANHDVMQIVEVLDDRSRDN 353
             +RQ +M++ATWP +V ++A + +  +P +V +G+ ++L AN  + Q +EVL    + +
Sbjct: 339 PTKRQTLMYTATWPKEVRKIAADLL-VNPAQVNIGNVDELVANKSITQTIEVLAPMEKHS 398

Query: 354 RLVALLEKYHKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLF 413
           RL  +L    +   +++++F   K    ++   L R  + A +IHGDK+Q ER   L+ F
Sbjct: 399 RLEQILRS--QEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQF 458

Query: 414 KSGSSPLMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQ 473
           +SG +P+++ATDVAARGLD+ D+ VV+NY FP   EDYVHRIGRTGRAG  G+A+TFF  
Sbjct: 459 RSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGD 518

Query: 474 QNKGLAGELVNVLREAKQVVPDALLKFGT 500
           Q+   A +L+ +L  A Q VP  + +  T
Sbjct: 519 QDAKHASDLIKILEGANQKVPPQVREMAT 540

[Close]

BLAST of Carg25329 vs. TAIR 10
Match: AT3G01540.2 (DEAD box RNA helicase 1 )

HSP 1 Score: 314.7 bits (805), Expect = 1.4e-85
Identity = 176/425 (41.41%), Postives = 252/425 (59.29%), Query Frame = 0


Query: 78  VSINASDEKEEAKVDENSTDRSVVVTGKGVKEAGFVPLKSFVEAGLPDAVLE--CCRTFK 137
           V + +S    E   +  S    + V+G  V      PL SF   G P  +L       F 
Sbjct: 124 VPLPSSAPASELSPEAYSRRHEITVSGGQVPP----PLMSFEATGFPPELLREVLSAGFS 183

Query: 138 SPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVL 197
           +P+PIQ+ +WP  + GRD + IA TGSGKTL + +PG +H+   R         P  LVL
Sbjct: 184 APTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSR---MGPTILVL 243

Query: 198 SPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGVDIVIGTPGRLKDLME 257
           SPTRELA QI       G    ++ TCLYGG  KG Q+  L+ G DIV+ TPGRL D++E
Sbjct: 244 SPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILE 303

Query: 258 MEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMFSATWPLQVNQLAQEF 317
           M    L ++S++VLDEADRMLDMGFEP++R I+ +   +RQ +M++ATWP  V ++A + 
Sbjct: 304 MRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADL 363

Query: 318 MDPDPVKVVVGS-EDLAANHDVMQIVEVLDDRSRDNRLVALLEKYHKSQRNRVLVFVLYK 377
           +  +P +V +G+ ++L AN  + Q +EV+    +  RL  +L    +   ++V++F   K
Sbjct: 364 L-VNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRS--QEPGSKVIIFCSTK 423

Query: 378 NEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMIATDVAARGLDIPDVE 437
               ++   L R+ + A +IHGDK+Q ER   L+ F+SG +P+++ATDVAARGLD+ D+ 
Sbjct: 424 RMCDQLTRNLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIR 483

Query: 438 VVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAKQVVPDAL 497
            V+NY FP   EDYVHRIGRTGRAG  G A TFF  Q+   A +L+ +L  A Q VP  +
Sbjct: 484 AVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQI 537

Query: 498 LKFGT 500
            +  T
Sbjct: 544 REMAT 537

The following BLAST results are available for this feature:

BLAST of Carg25329 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011359.1	1.2e-296	100.00	DEAD-box ATP-dependent RNA helicase 5 [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_023511461.1	4.3e-294	99.06	DEAD-box ATP-dependent RNA helicase 5-like isoform X1 [Cucurbita pepo subsp. pep...	[more]
XP_022963969.1	5.7e-294	99.06	DEAD-box ATP-dependent RNA helicase 5-like [Cucurbita moschata]	[more]
XP_023511462.1	2.0e-291	98.69	DEAD-box ATP-dependent RNA helicase 5-like isoform X2 [Cucurbita pepo subsp. pep...	[more]
XP_022967233.1	1.6e-288	97.76	DEAD-box ATP-dependent RNA helicase 5-like [Cucurbita maxima]	[more]

BLAST of Carg25329 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YS30	2.8e-195	71.43	DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q9C551	1.4e-194	67.66	DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana OX=3702 GN=RH5 PE=...	[more]
A5E1W4	1.2e-108	45.24	ATP-dependent RNA helicase DBP3 OS=Lodderomyces elongisporus (strain ATCC 11503 ...	[more]
A5DAC8	1.5e-108	46.03	ATP-dependent RNA helicase DBP3 OS=Meyerozyma guilliermondii (strain ATCC 6260 /...	[more]
Q6CT46	2.6e-108	47.06	ATP-dependent RNA helicase DBP3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS ...	[more]

BLAST of Carg25329 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HLR1	2.7e-294	99.06	DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1HUH8	7.7e-289	97.76	DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5A7VL81	2.3e-269	91.95	DEAD-box ATP-dependent RNA helicase 5 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CNI1	2.3e-269	91.95	DEAD-box ATP-dependent RNA helicase 5 OS=Cucumis melo OX=3656 GN=LOC103502795 PE...	[more]
A0A6J1ET43	2.6e-268	91.01	DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of Carg25329 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31970.1	9.9e-196	67.66	DEA(D/H)-box RNA helicase family protein	[more]
AT5G63120.2	1.4e-104	47.98	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G55150.1	1.2e-103	49.39	DEA(D/H)-box RNA helicase family protein	[more]
AT5G14610.2	4.0e-88	43.96	DEAD box RNA helicase family protein	[more]
AT3G01540.2	1.4e-85	41.41	DEAD box RNA helicase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 133..339 e-value: 8.2E-62 score: 221.3
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 145..322 score: 30.880259
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 378..459 e-value: 1.4E-32 score: 124.2
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 350..459 e-value: 6.3E-29 score: 100.6
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 351..498 score: 22.150768
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 326..501 e-value: 6.1E-54 score: 184.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 57..325 e-value: 2.4E-76 score: 258.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 189..472
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 139..309 e-value: 2.6E-47 score: 160.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..97
None	No IPR available	PANTHER	PTHR47958:SF82	BNAA08G07020D PROTEIN	coord: 2..520
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 2..520
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 336..468 e-value: 4.09663E-57 score: 185.018
None	No IPR available	CDD	cd00268	DEADc	coord: 134..323 e-value: 5.91078E-95 score: 285.49
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 268..276
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 116..142 score: 8.506117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25329-RA	Carg25329-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding