Carg25312 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg25312
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr11: 10423965 .. 10424636 (+)
RNA-Seq ExpressionCarg25312
SyntenyCarg25312
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGTCTCCAGTCCTCTGTTAGAGCCAAGAGGCTTTGGAATGTTCTCAAGGTAACGCTTATTCTAATGGCAAGAAAGGGTCTGATCTCAAAGAGAAGGTTCATCATGGACATGAATTTGATGGTGAAGAGAGGTAAGCTGTTCAGAAAATCTTTCACCAGCTACTTCATGTTCCATCACCATCACCACAGCTCCAGTGTCGGAGATATGACGTGTGGCGGTTTCGGCATACAGGACTACGAGTTTTCCTGCAGCAACACTCCCATTAATCCTGTTTTTTCCCACATGTCAAAGCGTAGTGCCAAATACCACGCTTACTTCCCCTGTATCAACCTTCCTGTGGAGATGGAAACAAAGCAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTTCAGACCCAGAAGCCAGGGCGGCGTTTACTTTACTACCCATGACTCCTGAGAACACAGTAAATCACTTGCAGTATAATGCTTTAAGTCCTGCAATGGAGGGGGCAAGCCCACTCGTTTCCTCGTTCAACGTACGGATATCCAACTATTCGTCTGAGGAAGAAAATGACATTAGCAGTGAAAGTGGACAAGTAGATAATCAGGCTGAGGAATTCATTAGAAGGTTCTATGAACAGCTGAGGACGCAACGACGCCTGCAACGACTGCAATATAGTTAA

mRNA sequence

ATGGGTGGTCTCCAGTCCTCTGTTAGAGCCAAGAGGCTTTGGAATGTTCTCAAGGTAACGCTTATTCTAATGGCAAGAAAGGGTCTGATCTCAAAGAGAAGGTTCATCATGGACATGAATTTGATGGTGAAGAGAGGTAAGCTGTTCAGAAAATCTTTCACCAGCTACTTCATGTTCCATCACCATCACCACAGCTCCAGTGTCGGAGATATGACGTGTGGCGGTTTCGGCATACAGGACTACGAGTTTTCCTGCAGCAACACTCCCATTAATCCTGTTTTTTCCCACATGTCAAAGCGTAGTGCCAAATACCACGCTTACTTCCCCTGTATCAACCTTCCTGTGGAGATGGAAACAAAGCAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTTCAGACCCAGAAGCCAGGGCGGCGTTTACTTTACTACCCATGACTCCTGAGAACACAGTAAATCACTTGCAGTATAATGCTTTAAGTCCTGCAATGGAGGGGGCAAGCCCACTCGTTTCCTCGTTCAACGTACGGATATCCAACTATTCGTCTGAGGAAGAAAATGACATTAGCAGTGAAAGTGGACAAGTAGATAATCAGGCTGAGGAATTCATTAGAAGGTTCTATGAACAGCTGAGGACGCAACGACGCCTGCAACGACTGCAATATAGTTAA

Coding sequence (CDS)

ATGGGTGGTCTCCAGTCCTCTGTTAGAGCCAAGAGGCTTTGGAATGTTCTCAAGGTAACGCTTATTCTAATGGCAAGAAAGGGTCTGATCTCAAAGAGAAGGTTCATCATGGACATGAATTTGATGGTGAAGAGAGGTAAGCTGTTCAGAAAATCTTTCACCAGCTACTTCATGTTCCATCACCATCACCACAGCTCCAGTGTCGGAGATATGACGTGTGGCGGTTTCGGCATACAGGACTACGAGTTTTCCTGCAGCAACACTCCCATTAATCCTGTTTTTTCCCACATGTCAAAGCGTAGTGCCAAATACCACGCTTACTTCCCCTGTATCAACCTTCCTGTGGAGATGGAAACAAAGCAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTTCAGACCCAGAAGCCAGGGCGGCGTTTACTTTACTACCCATGACTCCTGAGAACACAGTAAATCACTTGCAGTATAATGCTTTAAGTCCTGCAATGGAGGGGGCAAGCCCACTCGTTTCCTCGTTCAACGTACGGATATCCAACTATTCGTCTGAGGAAGAAAATGACATTAGCAGTGAAAGTGGACAAGTAGATAATCAGGCTGAGGAATTCATTAGAAGGTTCTATGAACAGCTGAGGACGCAACGACGCCTGCAACGACTGCAATATAGTTAA

Protein sequence

MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFHHHHHSSSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETKQQEEEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVSSFNVRISNYSSEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS
Homology
BLAST of Carg25312 vs. NCBI nr
Match: KAG7022606.1 (hypothetical protein SDJN02_16340, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 433.3 bits (1113), Expect = 1.2e-117
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0

Query: 1   MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFH 60
           MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFH
Sbjct: 1   MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFH 60

Query: 61  HHHHSSSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETK 120
           HHHHSSSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETK
Sbjct: 61  HHHHSSSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETK 120

Query: 121 QQEEEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVSSFNVRISN 180
           QQEEEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVSSFNVRISN
Sbjct: 121 QQEEEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVSSFNVRISN 180

Query: 181 YSSEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS 224
           YSSEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS
Sbjct: 181 YSSEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS 223

BLAST of Carg25312 vs. NCBI nr
Match: KAG6588851.1 (hypothetical protein SDJN03_17416, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 426.0 bits (1094), Expect = 2.0e-115
Identity = 222/227 (97.80%), Postives = 222/227 (97.80%), Query Frame = 0

Query: 1   MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFH 60
           MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFH
Sbjct: 1   MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFH 60

Query: 61  HHHHSSSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETK 120
           HHHH SSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETK
Sbjct: 61  HHHHGSSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETK 120

Query: 121 QQ----EEEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVSSFNV 180
           QQ    EEEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVSSFNV
Sbjct: 121 QQEEEEEEEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVSSFNV 180

Query: 181 RISNYSSEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS 224
           RISNYSSEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS
Sbjct: 181 RISNYSSEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS 227

BLAST of Carg25312 vs. NCBI nr
Match: XP_022928225.1 (uncharacterized protein LOC111435119 [Cucurbita moschata])

HSP 1 Score: 416.4 bits (1069), Expect = 1.6e-112
Identity = 216/223 (96.86%), Postives = 218/223 (97.76%), Query Frame = 0

Query: 1   MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFH 60
           MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFH
Sbjct: 1   MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFH 60

Query: 61  HHHHSSSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETK 120
           HHHH S+ GDMTCGGFGIQDYEFSCSNTPIN VFSHMSKRSAKYHAYFPCINLPVEMETK
Sbjct: 61  HHHHGSNAGDMTCGGFGIQDYEFSCSNTPINTVFSHMSKRSAKYHAYFPCINLPVEMETK 120

Query: 121 QQEEEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVSSFNVRISN 180
           QQ EEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVS FNVRISN
Sbjct: 121 QQ-EEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVSPFNVRISN 180

Query: 181 YSSEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS 224
           YSSEEEN+ISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS
Sbjct: 181 YSSEEENEISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS 222

BLAST of Carg25312 vs. NCBI nr
Match: XP_022989722.1 (uncharacterized protein LOC111486722 [Cucurbita maxima])

HSP 1 Score: 404.4 bits (1038), Expect = 6.2e-109
Identity = 210/223 (94.17%), Postives = 213/223 (95.52%), Query Frame = 0

Query: 1   MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFH 60
           MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLM+KRGKLFRKSFTSYFMFH
Sbjct: 1   MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMLKRGKLFRKSFTSYFMFH 60

Query: 61  HHHHSSSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETK 120
           HHHH SS GDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETK
Sbjct: 61  HHHHGSSAGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETK 120

Query: 121 QQEEEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVSSFNVRISN 180
           QQ    EEEEEGSDPEA AAFTLLPMTPENTVNH +YNALSPAMEGASPLVS FNVRISN
Sbjct: 121 QQ----EEEEEGSDPEAWAAFTLLPMTPENTVNHWKYNALSPAMEGASPLVSPFNVRISN 180

Query: 181 YSSEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS 224
           YSSEEEN+ISSESGQVDNQAEEFIRRFYEQLRTQRRLQ LQYS
Sbjct: 181 YSSEEENEISSESGQVDNQAEEFIRRFYEQLRTQRRLQLLQYS 219

BLAST of Carg25312 vs. NCBI nr
Match: XP_023531348.1 (uncharacterized protein LOC111793620 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-106
Identity = 209/223 (93.72%), Postives = 211/223 (94.62%), Query Frame = 0

Query: 1   MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFH 60
           MGGLQSSVRAKRLWNVLKV LILMARKGLISKRRFIMDMNLM+KRGKLFRKSFTSYFMFH
Sbjct: 1   MGGLQSSVRAKRLWNVLKVALILMARKGLISKRRFIMDMNLMLKRGKLFRKSFTSYFMFH 60

Query: 61  HHHHSSSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETK 120
           HHHH SSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINL     TK
Sbjct: 61  HHHHGSSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINL-----TK 120

Query: 121 QQEEEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVSSFNVRISN 180
           Q  EEEEEEEEGSDPEARAA TLLPMTPENTVNHLQYNALSPAMEGASPLVS FNVRISN
Sbjct: 121 Q--EEEEEEEEGSDPEARAAITLLPMTPENTVNHLQYNALSPAMEGASPLVSPFNVRISN 180

Query: 181 YSSEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS 224
           YSSEEEN+ISSESGQVDNQAEEFIRRFYEQLRTQRRLQ LQYS
Sbjct: 181 YSSEEENEISSESGQVDNQAEEFIRRFYEQLRTQRRLQLLQYS 216

BLAST of Carg25312 vs. ExPASy TrEMBL
Match: A0A6J1ER45 (uncharacterized protein LOC111435119 OS=Cucurbita moschata OX=3662 GN=LOC111435119 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 7.6e-113
Identity = 216/223 (96.86%), Postives = 218/223 (97.76%), Query Frame = 0

Query: 1   MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFH 60
           MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFH
Sbjct: 1   MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFH 60

Query: 61  HHHHSSSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETK 120
           HHHH S+ GDMTCGGFGIQDYEFSCSNTPIN VFSHMSKRSAKYHAYFPCINLPVEMETK
Sbjct: 61  HHHHGSNAGDMTCGGFGIQDYEFSCSNTPINTVFSHMSKRSAKYHAYFPCINLPVEMETK 120

Query: 121 QQEEEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVSSFNVRISN 180
           QQ EEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVS FNVRISN
Sbjct: 121 QQ-EEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVSPFNVRISN 180

Query: 181 YSSEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS 224
           YSSEEEN+ISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS
Sbjct: 181 YSSEEENEISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS 222

BLAST of Carg25312 vs. ExPASy TrEMBL
Match: A0A6J1JGM3 (uncharacterized protein LOC111486722 OS=Cucurbita maxima OX=3661 GN=LOC111486722 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.0e-109
Identity = 210/223 (94.17%), Postives = 213/223 (95.52%), Query Frame = 0

Query: 1   MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFH 60
           MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLM+KRGKLFRKSFTSYFMFH
Sbjct: 1   MGGLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMLKRGKLFRKSFTSYFMFH 60

Query: 61  HHHHSSSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETK 120
           HHHH SS GDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETK
Sbjct: 61  HHHHGSSAGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETK 120

Query: 121 QQEEEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVSSFNVRISN 180
           QQ    EEEEEGSDPEA AAFTLLPMTPENTVNH +YNALSPAMEGASPLVS FNVRISN
Sbjct: 121 QQ----EEEEEGSDPEAWAAFTLLPMTPENTVNHWKYNALSPAMEGASPLVSPFNVRISN 180

Query: 181 YSSEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS 224
           YSSEEEN+ISSESGQVDNQAEEFIRRFYEQLRTQRRLQ LQYS
Sbjct: 181 YSSEEENEISSESGQVDNQAEEFIRRFYEQLRTQRRLQLLQYS 219

BLAST of Carg25312 vs. ExPASy TrEMBL
Match: A0A5D3DYM4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001870 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 7.2e-87
Identity = 185/230 (80.43%), Postives = 197/230 (85.65%), Query Frame = 0

Query: 3   GLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFHHH 62
           GLQS VRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGK+FRKS T+YFMFHHH
Sbjct: 2   GLQSCVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKVFRKSVTNYFMFHHH 61

Query: 63  HHSSSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETKQQ 122
           H+ SS  DMTCGGFGIQDYEFSCSNTPIN VFSHMSKRS KY  YFPCINLPVEMET++Q
Sbjct: 62  HNHSSHRDMTCGGFGIQDYEFSCSNTPINSVFSHMSKRSTKYQTYFPCINLPVEMETRRQ 121

Query: 123 ----EEEEEEEEEGSDPEARAAFTLLPMTPENTV-NHLQYN----ALSPAMEGASPLVSS 182
               +EEEEEEEE S  EA+A   LL MTPENT+ NHLQYN    ALSPAME  SP    
Sbjct: 122 QQDDDEEEEEEEEDSYQEAKADSYLL-MTPENTLNNHLQYNGCSFALSPAMEAVSP---- 181

Query: 183 FNVRISNYSSEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS 224
           FNVRISNYSSEEEN+ISSESGQVDNQAEEFIRRFYEQL+ Q+RLQ LQY+
Sbjct: 182 FNVRISNYSSEEENEISSESGQVDNQAEEFIRRFYEQLKMQKRLQLLQYN 226

BLAST of Carg25312 vs. ExPASy TrEMBL
Match: A0A1S3BNR6 (uncharacterized protein LOC103491858 OS=Cucumis melo OX=3656 GN=LOC103491858 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 7.2e-87
Identity = 185/230 (80.43%), Postives = 197/230 (85.65%), Query Frame = 0

Query: 3   GLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFHHH 62
           GLQS VRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGK+FRKS T+YFMFHHH
Sbjct: 2   GLQSCVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKVFRKSVTNYFMFHHH 61

Query: 63  HHSSSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETKQQ 122
           H+ SS  DMTCGGFGIQDYEFSCSNTPIN VFSHMSKRS KY  YFPCINLPVEMET++Q
Sbjct: 62  HNHSSHRDMTCGGFGIQDYEFSCSNTPINSVFSHMSKRSTKYQTYFPCINLPVEMETRRQ 121

Query: 123 ----EEEEEEEEEGSDPEARAAFTLLPMTPENTV-NHLQYN----ALSPAMEGASPLVSS 182
               +EEEEEEEE S  EA+A   LL MTPENT+ NHLQYN    ALSPAME  SP    
Sbjct: 122 QQDDDEEEEEEEEDSYQEAKADSYLL-MTPENTLNNHLQYNGCSFALSPAMEAVSP---- 181

Query: 183 FNVRISNYSSEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS 224
           FNVRISNYSSEEEN+ISSESGQVDNQAEEFIRRFYEQL+ Q+RLQ LQY+
Sbjct: 182 FNVRISNYSSEEENEISSESGQVDNQAEEFIRRFYEQLKMQKRLQLLQYN 226

BLAST of Carg25312 vs. ExPASy TrEMBL
Match: A0A0A0L6S8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G251950 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 6.7e-85
Identity = 180/226 (79.65%), Postives = 196/226 (86.73%), Query Frame = 0

Query: 3   GLQSSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFHHH 62
           GLQS VRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKS T+YFMFHHH
Sbjct: 2   GLQSCVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSVTNYFMFHHH 61

Query: 63  HHSSSVGDMTCGGFGIQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMET-KQ 122
           H+ SS  DMT G FGIQDYEFSCSNTPIN VFSHMSKR+ KY AYFPCINLPVE+ET ++
Sbjct: 62  HNHSSHRDMTRGVFGIQDYEFSCSNTPINSVFSHMSKRTTKYQAYFPCINLPVEIETRRR 121

Query: 123 QEEEEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYN----ALSPAMEGASPLVSSFNVR 182
           Q++E+EEEEE S  EA+A   LL MTPENT++HLQYN    ALSPAME  SP    FNVR
Sbjct: 122 QQDEDEEEEEDSYQEAKADSYLL-MTPENTLSHLQYNGCTFALSPAMEAVSP----FNVR 181

Query: 183 ISNYSSEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRLQRLQYS 224
           ISNYSSEEEN+ISSESGQVDNQAEEFIRRFYEQL+ Q+RLQ LQY+
Sbjct: 182 ISNYSSEEENEISSESGQVDNQAEEFIRRFYEQLKMQKRLQLLQYN 222

BLAST of Carg25312 vs. TAIR 10
Match: AT1G52140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 4.1e-10
Identity = 69/222 (31.08%), Postives = 103/222 (46.40%), Query Frame = 0

Query: 10  AKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFHHHHH----- 69
           +K+LWN+++  L+ M RKG +SK + I D N  +KRGK          MFH         
Sbjct: 8   SKKLWNIVRF-LLYMIRKG-VSKNKLIADFNATLKRGK--------NLMFHQRRRVHAGS 67

Query: 70  --SSSVGDMTCGGFGIQDYEFSCSNTP-INPVFSHMS-KRSAKYHAYFPCINLPVEMETK 129
             S+++   +      Q+YEFSCSNTP  +  FS+M+  R   ++  F C   P  +   
Sbjct: 68  TASAALNATSATASSRQEYEFSCSNTPNYSFPFSNMAFMRKKSHNNLFTCGQTPQTL--- 127

Query: 130 QQEEEEEEEEEGSDPEARAAFTLLPMTPE--NTVNHLQYNALSPAME--GASPLVSSFNV 189
                     +     ARA   LL    E  N        ALSP     G +PLV    V
Sbjct: 128 ----------DDDVAAARAVLELLNGVGEKGNVTPADLTVALSPYFPGFGQTPLVRPLRV 187

Query: 190 RISNYSSEEEN-DISSESGQVDNQAEEFIRRFYEQLRTQRRL 218
             S +    EN D++  +G VD  A++FI++FY+ L  Q+++
Sbjct: 188 TDSPFPLTPENGDVA--NGHVDKAADDFIKKFYKNLNQQKKM 204

BLAST of Carg25312 vs. TAIR 10
Match: AT3G16330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 9.4e-07
Identity = 63/215 (29.30%), Postives = 101/215 (46.98%), Query Frame = 0

Query: 10  AKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFHHHHHSSSVG 69
           +K+L N+++  L  M  KG ISK++ + D N  +KRGK          MFH+      V 
Sbjct: 8   SKKLGNIVRFVL-YMLHKG-ISKQKLLADFNATLKRGK--------NLMFHNRRR---VP 67

Query: 70  DMTCGGFGIQDYEFSCSNTPINPVFSHMS--KRSAKYHAYFPCINLP--VEMETKQQEEE 129
                     +YEFSCS+TP      +M+  K+ + +++ F C   P  ++ +T      
Sbjct: 68  GSAVASHPQNEYEFSCSDTPNYTFPFNMAAFKKKSHHNSLFSCGQAPPTLDDDTSVSRAV 127

Query: 130 EEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEGASPLVSS---FNVRISNYS 189
            E    G D +  +       TP  ++  L   ALSP + G     SS     V  S + 
Sbjct: 128 LELLNSGGDHDQGS------NTPAFSIEAL--TALSPYLPGFGRSTSSVRPLRVTDSPFP 187

Query: 190 SEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRL 218
             EE D++  +G VD  A+EFI++FY+ L  Q+++
Sbjct: 188 LREEGDVA--NGHVDKAADEFIKKFYKNLYQQKKM 199

BLAST of Carg25312 vs. TAIR 10
Match: AT4G29110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to chitin; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 56/216 (25.93%), Postives = 93/216 (43.06%), Query Frame = 0

Query: 6   SSVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSFTSYFMFHHHHHS 65
           + V AKRLW V+++   ++ + G + K + ++D+NLM+KRG    K+ T+         S
Sbjct: 18  AQVAAKRLWKVVRIVFCVL-KTGTV-KNKLMLDLNLMLKRG---NKAITNL-----RRRS 77

Query: 66  SSVGDMTCGGFG-IQDYEFSCSNTPINPVFSHMSKRSAKYHAYFPCINLPVEMETKQQEE 125
           SS G         ++DY+           F+ +SKR  + H  +                
Sbjct: 78  SSTGSHDVSSSSRVRDYD----------PFAFISKRKRRVHGGY---------------- 137

Query: 126 EEEEEEEGSDPEARAAFTLLPMTPENTVNHLQYNALSPAMEG---ASPLVSSFNVRISNY 185
             + EE+  +   +  F LL    + TV      A   A E     SP V    V  S +
Sbjct: 138 --DNEEDAVEAAVKKVFELLGENDKKTV------ATESARESPLIMSPAVRQLRVTDSPF 186

Query: 186 SSEEENDISSESGQVDNQAEEFIRRFYEQLRTQRRL 218
             ++  D       VD  AEEFI++FY+ L+ Q+++
Sbjct: 198 PLDDGGD---HDHVVDKAAEEFIKKFYKNLKLQKKM 186

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7022606.11.2e-117100.00hypothetical protein SDJN02_16340, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6588851.12.0e-11597.80hypothetical protein SDJN03_17416, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022928225.11.6e-11296.86uncharacterized protein LOC111435119 [Cucurbita moschata][more]
XP_022989722.16.2e-10994.17uncharacterized protein LOC111486722 [Cucurbita maxima][more]
XP_023531348.11.3e-10693.72uncharacterized protein LOC111793620 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1ER457.6e-11396.86uncharacterized protein LOC111435119 OS=Cucurbita moschata OX=3662 GN=LOC1114351... [more]
A0A6J1JGM33.0e-10994.17uncharacterized protein LOC111486722 OS=Cucurbita maxima OX=3661 GN=LOC111486722... [more]
A0A5D3DYM47.2e-8780.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BNR67.2e-8780.43uncharacterized protein LOC103491858 OS=Cucumis melo OX=3656 GN=LOC103491858 PE=... [more]
A0A0A0L6S86.7e-8579.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G251950 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G52140.14.1e-1031.08unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G16330.19.4e-0729.30unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G29110.11.5e-0425.93unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 194..222
e-value: 2.2E-8
score: 33.5
NoneNo IPR availablePANTHERPTHR33265:SF6OS01G0930500 PROTEINcoord: 5..222
NoneNo IPR availablePANTHERPTHR33265AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATEDcoord: 5..222

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25312-RACarg25312-RAmRNA