Carg25302 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTAGTCGAACAATGGCCATTGGGCCACCGAGCTACGAACAGACCAGACCAAAATATGTGTTCGCCGGCCGCGCAATCCATAAACCTATTTTGGAATGAAGATACTTCGGACAGGGATGAGTAGAATACTCAATTCGAGCTTGGCATCTTCTGCATTTTGACGATCTTTTGGTATTACAACCTCTTGATTACTGTTCCTCCTTTTTTTCAGAATTATTCGTTCTTTTTTTTGTTCTAGATTCAATTTTATGCAGCATTTGTATTCATTATTCGATCCTATACACCGTGATACTGTTCCAGGTCCTGTGGCTATACGATTTGCTAGTTTTACCATTCAATGGTTTCTTATTCACGAATCCTTCGATTTAATTTTGGTAATCTGTCTGTCGTTGCTCGAGAATTTTTTATTTGTGAAATTGCAACGATCCATTTCGGTTCGGTTTTTTATTGATTTGGTTGAAAGTTCAGATGATCGTGGTGACTACGTTCGATAATTTTTGCTGTTATAGAGAGGTTCCAGCCCTAGCTGTATTTGTAGGAAGACGTATTCTGTTTTGACCTAATTTTTCTACTCAATTATTTCTCCAATAATTGGATTTCTTCAGGTGATGGAGAAGAACAATTTTAAATGAACAACAGATGAGGAAATGGCGGTTGCACTTTCTGCATTATACCGTCTGAATCTTCCCTATCTCCATGGATGCGTCCGAGGTGCTAAACTACCTAATACTTCAAAGAAACATAACTAAATAGCTACTGAAACATCAAGAGCAAACTTGTTTATTCCATTGTTCTGTTTTGACTCATGAAGCTTGACAAGAAGCTTTTGACGAAATACTTGATGGAGAATCCTCATGACAATCTTCCATATGTTGCTGATGAGGTACCAAACCTTCTTAGTCTTTATTAGTTTAATACAAGAGGTGATCCGGAAATGAGGCTATGGCTAATTGCTTAATTCCATTGACCCATTTCTTTGGAGTATGCTTTTCTTCTGTTACAAATTGGCACAAGGCATATTAAGAAACGTAGCTTGAGAAAATGATGGCTTTAGCTCCCATTCTTCAGCACTTCGTTCAACAACTAGTCATATCACGTTCTTCTTTTGTAAACTATATGTTCATTGTGATTTGCAGGAGGACAAGGATGCTAGTAATGAGCGTATCCATTCACATCATCATCATCGTCGATCATTAAAAGTAAGTATAGATATACAAAAATTCATCCGTTAAACTCCTTTCGATATATTATTACAGATACAAATCTAGTACAGATGTAGCATCGATATATTATTACAGATACAAATCTAGTACAGATGTAGCATTGATTGTAGCATAGGTTAGCTTGCTTTGGAGCTTCGAGTCCTCATTCTTGATGTTATGTATGGTGTTCGTTACTCGTGGCTTACATTCCCATGTCTCTCAAAACTTACGTCTCTCGAAACTTACGTCTCTCGAAACTTACAGTAGGTCAAAACTTACAGTAAAGGAGGTGACCCATTTGTTTGGAGTATGCTTTTCTTTTGTTATAAATTAGCATAAGGCATATTAAGAAACGTAGCTTGAGAAAATGATGGCTTTAGCTCCCATTCACCAACCAGTCATATCACATTCTTCTTTTGTAAACTATATGTTCGTTGTGATTTACAGTAGGACAAGGATGCTGGTAATGAATGTATCTATTCACATTACAATCATCATCGATCATTGAAAGTAAGTATAGATATACAAAAGATTATCCTTCGAACTCATTTTGACATTATTACAAATATAAATCCAGTATACATATTGCATTGATTGTATAGCATAGGTTAGCTTGCATTGTAACTTCTGGCCCTCATTCTCAATGCTATTTATGGTGTTCGTTACTCGTGGCTTACATTCCCACATCTCTCAAAACTTTCAGGTAAAGGAGGTGATTAATTTCCTTCTATATATTGATGAAGCAGGGGAAGGCTACAAAACAGCTGCTTACACAAAACCTTATTCCTTTTTCGACTTGCGAATGCTTATATTCCTGCCTCACAGAGGCGATCATGAATCACGAATGAATAAGCCATTGTTGATTGATATTCATATTCATTAA TTTAGTCGAACAATGGCCATTGGGCCACCGAGCTACGAACAGACCAGACCAAAATATGTGTTCGCCGGCCGCGCAATCCATAAACCTATTTTGGAATGAAGATACTTCGGACAGGGATGAGTAGAATACTCAATTCGAGCTTGGCATCTTCTGCATTTTGACGATCTTTTGGTGATGGAGAAGAACAATTTTAAATGAACAACAGATGAGGAAATGGCGGTTGCACTTTCTGCATTATACCGTCTGAATCTTCCCTATCTCCATGGATGCGTCCGAGCTTGACAAGAAGCTTTTGACGAAATACTTGATGGAGAATCCTCATGACAATCTTCCATATGTTGCTGATGAGGAGGACAAGGATGCTAGTAATGAGCGTATCCATTCACATCATCATCATCGTCGATCATTAAAAGACAAGGATGCTGGTAATGAATGTATCTATTCACATTACAATCATCATCGATCATTGAAAGTAAAGGAGGTGATTAATTTCCTTCTATATATTGATGAAGCAGGGGAAGGCTACAAAACAGCTGCTTACACAAAACCTTATTCCTTTTTCGACTTGCGAATGCTTATATTCCTGCCTCACAGAGGCGATCATGAATCACGAATGAATAAGCCATTGTTGATTGATATTCATATTCATTAA ATGGATGCGTCCGAGCTTGACAAGAAGCTTTTGACGAAATACTTGATGGAGAATCCTCATGACAATCTTCCATATGTTGCTGATGAGGAGGACAAGGATGCTAGTAATGAGCGTATCCATTCACATCATCATCATCGTCGATCATTAAAAGACAAGGATGCTGGTAATGAATGTATCTATTCACATTACAATCATCATCGATCATTGAAAGTAAAGGAGGTGATTAATTTCCTTCTATATATTGATGAAGCAGGGGAAGGCTACAAAACAGCTGCTTACACAAAACCTTATTCCTTTTTCGACTTGCGAATGCTTATATTCCTGCCTCACAGAGGCGATCATGAATCACGAATGAATAAGCCATTGTTGATTGATATTCATATTCATTAA MDASELDKKLLTKYLMENPHDNLPYVADEEDKDASNERIHSHHHHRRSLKDKDAGNECIYSHYNHHRSLKVKEVINFLLYIDEAGEGYKTAAYTKPYSFFDLRMLIFLPHRGDHESRMNKPLLIDIHIH Homology
BLAST of Carg25302 vs. NCBI nr
Match: KAG7022616.1 (hypothetical protein SDJN02_16350 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 269.2 bits (687), Expect = 1.8e-68 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of Carg25302 vs. NCBI nr
Match: KAG6588858.1 (hypothetical protein SDJN03_17423, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 214.5 bits (545), Expect = 5.2e-52 Identity = 109/129 (84.50%), Postives = 109/129 (84.50%), Query Frame = 0
BLAST of Carg25302 vs. NCBI nr
Match: XP_022928416.1 (uncharacterized protein LOC111435236 isoform X2 [Cucurbita moschata]) HSP 1 Score: 207.2 bits (526), Expect = 8.4e-50 Identity = 106/129 (82.17%), Postives = 106/129 (82.17%), Query Frame = 0
BLAST of Carg25302 vs. NCBI nr
Match: XP_022928415.1 (uncharacterized protein LOC111435236 isoform X1 [Cucurbita moschata]) HSP 1 Score: 126.7 bits (317), Expect = 1.4e-25 Identity = 70/110 (63.64%), Postives = 76/110 (69.09%), Query Frame = 0
BLAST of Carg25302 vs. NCBI nr
Match: XP_022989740.1 (uncharacterized protein LOC111486736 isoform X1 [Cucurbita maxima]) HSP 1 Score: 110.2 bits (274), Expect = 1.4e-20 Identity = 63/115 (54.78%), Postives = 73/115 (63.48%), Query Frame = 0
BLAST of Carg25302 vs. ExPASy TrEMBL
Match: A0A6J1EK87 (uncharacterized protein LOC111435236 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435236 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 4.0e-50 Identity = 106/129 (82.17%), Postives = 106/129 (82.17%), Query Frame = 0
BLAST of Carg25302 vs. ExPASy TrEMBL
Match: A0A6J1ERM0 (uncharacterized protein LOC111435236 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435236 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 6.9e-26 Identity = 70/110 (63.64%), Postives = 76/110 (69.09%), Query Frame = 0
BLAST of Carg25302 vs. ExPASy TrEMBL
Match: A0A6J1JN79 (uncharacterized protein LOC111486736 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486736 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 6.7e-21 Identity = 63/115 (54.78%), Postives = 73/115 (63.48%), Query Frame = 0
BLAST of Carg25302 vs. ExPASy TrEMBL
Match: A0A6J1JN84 (uncharacterized protein LOC111486736 isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111486736 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 4.8e-19 Identity = 62/116 (53.45%), Postives = 70/116 (60.34%), Query Frame = 0
BLAST of Carg25302 vs. ExPASy TrEMBL
Match: A0A6J1JR84 (uncharacterized protein LOC111486736 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111486736 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 8.2e-19 Identity = 63/117 (53.85%), Postives = 73/117 (62.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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