Carg25272 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg25272
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionC2H2-type domain-containing protein
LocationCarg_Chr16: 8444016 .. 8445110 (+)
RNA-Seq ExpressionCarg25272
SyntenyCarg25272
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAGCGTTCATTAGATTTCGGAATTTATCGTTCCATTTCCGTAAGGAAACTGAATTAATTAGACGTTTTCATTCCGGAACGAATCTGAAATCCACTTCTCCGGATTCTTCCTGCTCTGCCGTTGCGATTTTCTGGGATTTGGACAATAAACCACCGAAATCGTTACCGCCTTACGAAGCTGCTGTTAAGCTCAAGGCTGCAGCGGCTTCCTTTGGCGCCGTTCGGTACATGGTGGCTTATGCGAATCGGCATGCGTTCAGCTATGTGCCGCAAGTTGTTAGAGAGAAGAGGAGAGAGAGGAAGATGCTTAATCAATTGGAGAGGAAAGGTGTGATTAAATCGATTGAGCCGTATCTGTGTCGTGTTTGTGGGAGAAATTTCTATACGAATGAGAAGTTAGTGAATCATTTTAAGCAAATTCATGAGAGTGAGCATAAGAAGAGGTTGAATCAGATCGAATCTGCCAAGGGTAGTAGAAGAGTGAAGTTGCTCGCTAAGTATTCGATGAAAATACAGAAGTATAAGAATGCTGCTAGGGATGTTTTGACTCCGAAAGAGGGATATGGTCTAGCAGATGAGTTGAAGAGGGCAGGGTTTTTTGTGAAGACTGTGTCGGATAAGCCTGAAGCTGCCGATGTAGAATTGAGAAACGACATGGTTGAGGTCATGGATAGGAGAAGAGCAGAGTGTTTGGTTCTTGTATCAGATGATTCTGATTTTGTGAATGTTTTGAAGGAGGCCAAGTTGAGATGTCTTAGAACAGTTGTTGTTGGGGATCTTAATGATGGGCCATTGAAGAGAAATGCTGATACTGGGTTTTCTTGGAAGGAGATTTTAATGGGGAAGGCTAAGAAGGAGGCTGTGTCTGTTGTGGGAAAATGGAAGGATCGGGACGTTTTGAAGAGATTGGAATGGACATACAATCCTCAATTGGAGAAGGAAGTGTTTGGTTTGGATGATGATATGGGCGAGGATGAAGATGTTGAACAAGGTTCGGTTGATGAGAATATGACAAATGGTGACAGTGGTGCTTGGTGGGATCTCCGCTCTGATGCTGAAACTGAAGCTGTGTCGTCACGATCATGTAAATGA

mRNA sequence

ATGATAGCGTTCATTAGATTTCGGAATTTATCGTTCCATTTCCGTAAGGAAACTGAATTAATTAGACGTTTTCATTCCGGAACGAATCTGAAATCCACTTCTCCGGATTCTTCCTGCTCTGCCGTTGCGATTTTCTGGGATTTGGACAATAAACCACCGAAATCGTTACCGCCTTACGAAGCTGCTGTTAAGCTCAAGGCTGCAGCGGCTTCCTTTGGCGCCGTTCGGTACATGGTGGCTTATGCGAATCGGCATGCGTTCAGCTATGTGCCGCAAGTTGTTAGAGAGAAGAGGAGAGAGAGGAAGATGCTTAATCAATTGGAGAGGAAAGGTGTGATTAAATCGATTGAGCCGTATCTGTGTCGTGTTTGTGGGAGAAATTTCTATACGAATGAGAAGTTAGTGAATCATTTTAAGCAAATTCATGAGAGTGAGCATAAGAAGAGGTTGAATCAGATCGAATCTGCCAAGGGTAGTAGAAGAGTGAAGTTGCTCGCTAAGTATTCGATGAAAATACAGAAGTATAAGAATGCTGCTAGGGATGTTTTGACTCCGAAAGAGGGATATGGTCTAGCAGATGAGTTGAAGAGGGCAGGGTTTTTTGTGAAGACTGTGTCGGATAAGCCTGAAGCTGCCGATGTAGAATTGAGAAACGACATGGTTGAGGTCATGGATAGGAGAAGAGCAGAGTGTTTGGTTCTTGTATCAGATGATTCTGATTTTGTGAATGTTTTGAAGGAGGCCAAGTTGAGATGTCTTAGAACAGTTGTTGTTGGGGATCTTAATGATGGGCCATTGAAGAGAAATGCTGATACTGGGTTTTCTTGGAAGGAGATTTTAATGGGGAAGGCTAAGAAGGAGGCTGTGTCTGTTGTGGGAAAATGGAAGGATCGGGACGTTTTGAAGAGATTGGAATGGACATACAATCCTCAATTGGAGAAGGAAGTGTTTGGTTTGGATGATGATATGGGCGAGGATGAAGATGTTGAACAAGGTTCGGTTGATGAGAATATGACAAATGGTGACAGTGGTGCTTGGTGGGATCTCCGCTCTGATGCTGAAACTGAAGCTGTGTCGTCACGATCATGTAAATGA

Coding sequence (CDS)

ATGATAGCGTTCATTAGATTTCGGAATTTATCGTTCCATTTCCGTAAGGAAACTGAATTAATTAGACGTTTTCATTCCGGAACGAATCTGAAATCCACTTCTCCGGATTCTTCCTGCTCTGCCGTTGCGATTTTCTGGGATTTGGACAATAAACCACCGAAATCGTTACCGCCTTACGAAGCTGCTGTTAAGCTCAAGGCTGCAGCGGCTTCCTTTGGCGCCGTTCGGTACATGGTGGCTTATGCGAATCGGCATGCGTTCAGCTATGTGCCGCAAGTTGTTAGAGAGAAGAGGAGAGAGAGGAAGATGCTTAATCAATTGGAGAGGAAAGGTGTGATTAAATCGATTGAGCCGTATCTGTGTCGTGTTTGTGGGAGAAATTTCTATACGAATGAGAAGTTAGTGAATCATTTTAAGCAAATTCATGAGAGTGAGCATAAGAAGAGGTTGAATCAGATCGAATCTGCCAAGGGTAGTAGAAGAGTGAAGTTGCTCGCTAAGTATTCGATGAAAATACAGAAGTATAAGAATGCTGCTAGGGATGTTTTGACTCCGAAAGAGGGATATGGTCTAGCAGATGAGTTGAAGAGGGCAGGGTTTTTTGTGAAGACTGTGTCGGATAAGCCTGAAGCTGCCGATGTAGAATTGAGAAACGACATGGTTGAGGTCATGGATAGGAGAAGAGCAGAGTGTTTGGTTCTTGTATCAGATGATTCTGATTTTGTGAATGTTTTGAAGGAGGCCAAGTTGAGATGTCTTAGAACAGTTGTTGTTGGGGATCTTAATGATGGGCCATTGAAGAGAAATGCTGATACTGGGTTTTCTTGGAAGGAGATTTTAATGGGGAAGGCTAAGAAGGAGGCTGTGTCTGTTGTGGGAAAATGGAAGGATCGGGACGTTTTGAAGAGATTGGAATGGACATACAATCCTCAATTGGAGAAGGAAGTGTTTGGTTTGGATGATGATATGGGCGAGGATGAAGATGTTGAACAAGGTTCGGTTGATGAGAATATGACAAATGGTGACAGTGGTGCTTGGTGGGATCTCCGCTCTGATGCTGAAACTGAAGCTGTGTCGTCACGATCATGTAAATGA

Protein sequence

MIAFIRFRNLSFHFRKETELIRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYEAAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYLCRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAARDVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSDFVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDVLKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDLRSDAETEAVSSRSCK
Homology
BLAST of Carg25272 vs. NCBI nr
Match: KAG6577601.1 (hypothetical protein SDJN03_25175, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015649.1 hypothetical protein SDJN02_23286, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 718.4 bits (1853), Expect = 3.1e-203
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0

Query: 1   MIAFIRFRNLSFHFRKETELIRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60
           MIAFIRFRNLSFHFRKETELIRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE
Sbjct: 1   MIAFIRFRNLSFHFRKETELIRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60

Query: 61  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 180
           CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR
Sbjct: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 180

Query: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 240
           DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD
Sbjct: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDLRSDAETEAVSS 360
           LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDLRSDAETEAVSS
Sbjct: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDLRSDAETEAVSS 360

Query: 361 RSCK 365
           RSCK
Sbjct: 361 RSCK 364

BLAST of Carg25272 vs. NCBI nr
Match: XP_022965083.1 (uncharacterized protein LOC111465052 [Cucurbita maxima])

HSP 1 Score: 710.3 bits (1832), Expect = 8.6e-201
Identity = 360/364 (98.90%), Postives = 361/364 (99.18%), Query Frame = 0

Query: 1   MIAFIRFRNLSFHFRKETELIRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60
           MIAFIRFRNLS+ FRKETELIRRFHSGTNLKS SPDSSCSAVAIFWDLDNKPPKSLPPYE
Sbjct: 8   MIAFIRFRNLSYQFRKETELIRRFHSGTNLKSNSPDSSCSAVAIFWDLDNKPPKSLPPYE 67

Query: 61  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL
Sbjct: 68  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 127

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 180
           CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR
Sbjct: 128 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 187

Query: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 240
           DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD
Sbjct: 188 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 247

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 248 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 307

Query: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDLRSDAETEAVSS 360
           LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDL SDAETEAVSS
Sbjct: 308 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDLNSDAETEAVSS 367

Query: 361 RSCK 365
           RSCK
Sbjct: 368 RSCK 371

BLAST of Carg25272 vs. NCBI nr
Match: XP_022923441.1 (uncharacterized protein LOC111431136 [Cucurbita moschata])

HSP 1 Score: 703.0 bits (1813), Expect = 1.4e-198
Identity = 356/364 (97.80%), Postives = 359/364 (98.63%), Query Frame = 0

Query: 1   MIAFIRFRNLSFHFRKETELIRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60
           MIAFIRFRNLSF FRKETEL RRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE
Sbjct: 1   MIAFIRFRNLSFQFRKETELNRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60

Query: 61  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLKAAAASFGA+RYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKAAAASFGAIRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 180
           CRVCGRNFYTNEKLVNHFKQIHESEH KRLNQIESAKGSRRVKLLAKYSMKIQKYKN AR
Sbjct: 121 CRVCGRNFYTNEKLVNHFKQIHESEHTKRLNQIESAKGSRRVKLLAKYSMKIQKYKNGAR 180

Query: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 240
           DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVS+DSD
Sbjct: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSNDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDLRSDAETEAVSS 360
           LKRLEWTYNPQLEKEVFGLDDDMGEDEDV+QGSVDENMTNGDSGAWWDL SDAETEAVSS
Sbjct: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVDQGSVDENMTNGDSGAWWDLSSDAETEAVSS 360

Query: 361 RSCK 365
           RSCK
Sbjct: 361 RSCK 364

BLAST of Carg25272 vs. NCBI nr
Match: XP_023553504.1 (uncharacterized protein LOC111810902 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 701.4 bits (1809), Expect = 4.0e-198
Identity = 356/364 (97.80%), Postives = 358/364 (98.35%), Query Frame = 0

Query: 1   MIAFIRFRNLSFHFRKETELIRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60
           MIAFIRFRNLSFHFRKETELI RFHSGTNLKS SPDSSCSAVAIFWDLDNKPPKSLPPYE
Sbjct: 1   MIAFIRFRNLSFHFRKETELISRFHSGTNLKSNSPDSSCSAVAIFWDLDNKPPKSLPPYE 60

Query: 61  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLKAAAASFGAVRYMVAYANRHAFS VPQVVREKRRERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKAAAASFGAVRYMVAYANRHAFSNVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 180
           CRVCGRNFY NEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR
Sbjct: 121 CRVCGRNFYANEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 180

Query: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 240
           DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD
Sbjct: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKK AVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKAAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDLRSDAETEAVSS 360
           LKRLEWTYNP+LEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDL SDA+TEAVSS
Sbjct: 301 LKRLEWTYNPELEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDLSSDAKTEAVSS 360

Query: 361 RSCK 365
           RSCK
Sbjct: 361 RSCK 364

BLAST of Carg25272 vs. NCBI nr
Match: TYK19480.1 (Zinc finger family protein [Cucumis melo var. makuwa])

HSP 1 Score: 644.8 bits (1662), Expect = 4.4e-181
Identity = 328/368 (89.13%), Postives = 345/368 (93.75%), Query Frame = 0

Query: 1   MIAFIRFRNLSFHFRKETELIRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60
           MI+F+RFRNLS+ FR ET+L+RRFHSGTN KS SPDSS S VAIFWDLDNKPPKSLPPY+
Sbjct: 1   MISFVRFRNLSYKFRNETDLVRRFHSGTNPKSNSPDSSYSTVAIFWDLDNKPPKSLPPYQ 60

Query: 61  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLK AAASFGAVRYMVAYANRHAFSYVPQVVRE++RERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 180
           CRVCGRNFY  EKLVNHFKQIHESEHKKRLNQIESA+GSRRVKL+AKYSMKIQKYKNAAR
Sbjct: 121 CRVCGRNFYMYEKLVNHFKQIHESEHKKRLNQIESARGSRRVKLIAKYSMKIQKYKNAAR 180

Query: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 240
           DVLTP+ GYGLADELKRAGFFVKTVSDKPEAADVELRNDMVE+MDRRRAECLVLVSDDSD
Sbjct: 181 DVLTPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRRAECLVLVSDDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVD----ENMTNGDSGAWWDLRSDAETE 360
           LKRLEWTYNPQLEKEV GLDDD+GED++VE+GSVD    E M N D GAWWDL SDAET+
Sbjct: 301 LKRLEWTYNPQLEKEVSGLDDDIGEDDNVEEGSVDGGLCEIMQNNDRGAWWDLSSDAETD 360

Query: 361 AVSSRSCK 365
            VSS S K
Sbjct: 361 TVSSPSWK 368

BLAST of Carg25272 vs. ExPASy TrEMBL
Match: A0A6J1HMT7 (uncharacterized protein LOC111465052 OS=Cucurbita maxima OX=3661 GN=LOC111465052 PE=4 SV=1)

HSP 1 Score: 710.3 bits (1832), Expect = 4.1e-201
Identity = 360/364 (98.90%), Postives = 361/364 (99.18%), Query Frame = 0

Query: 1   MIAFIRFRNLSFHFRKETELIRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60
           MIAFIRFRNLS+ FRKETELIRRFHSGTNLKS SPDSSCSAVAIFWDLDNKPPKSLPPYE
Sbjct: 8   MIAFIRFRNLSYQFRKETELIRRFHSGTNLKSNSPDSSCSAVAIFWDLDNKPPKSLPPYE 67

Query: 61  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL
Sbjct: 68  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 127

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 180
           CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR
Sbjct: 128 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 187

Query: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 240
           DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD
Sbjct: 188 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 247

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 248 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 307

Query: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDLRSDAETEAVSS 360
           LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDL SDAETEAVSS
Sbjct: 308 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDLNSDAETEAVSS 367

Query: 361 RSCK 365
           RSCK
Sbjct: 368 RSCK 371

BLAST of Carg25272 vs. ExPASy TrEMBL
Match: A0A6J1E6T9 (uncharacterized protein LOC111431136 OS=Cucurbita moschata OX=3662 GN=LOC111431136 PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 6.6e-199
Identity = 356/364 (97.80%), Postives = 359/364 (98.63%), Query Frame = 0

Query: 1   MIAFIRFRNLSFHFRKETELIRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60
           MIAFIRFRNLSF FRKETEL RRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE
Sbjct: 1   MIAFIRFRNLSFQFRKETELNRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60

Query: 61  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLKAAAASFGA+RYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKAAAASFGAIRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 180
           CRVCGRNFYTNEKLVNHFKQIHESEH KRLNQIESAKGSRRVKLLAKYSMKIQKYKN AR
Sbjct: 121 CRVCGRNFYTNEKLVNHFKQIHESEHTKRLNQIESAKGSRRVKLLAKYSMKIQKYKNGAR 180

Query: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 240
           DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVS+DSD
Sbjct: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSNDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDLRSDAETEAVSS 360
           LKRLEWTYNPQLEKEVFGLDDDMGEDEDV+QGSVDENMTNGDSGAWWDL SDAETEAVSS
Sbjct: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVDQGSVDENMTNGDSGAWWDLSSDAETEAVSS 360

Query: 361 RSCK 365
           RSCK
Sbjct: 361 RSCK 364

BLAST of Carg25272 vs. ExPASy TrEMBL
Match: A0A5D3D7P9 (Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001350 PE=4 SV=1)

HSP 1 Score: 644.8 bits (1662), Expect = 2.1e-181
Identity = 328/368 (89.13%), Postives = 345/368 (93.75%), Query Frame = 0

Query: 1   MIAFIRFRNLSFHFRKETELIRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60
           MI+F+RFRNLS+ FR ET+L+RRFHSGTN KS SPDSS S VAIFWDLDNKPPKSLPPY+
Sbjct: 1   MISFVRFRNLSYKFRNETDLVRRFHSGTNPKSNSPDSSYSTVAIFWDLDNKPPKSLPPYQ 60

Query: 61  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLK AAASFGAVRYMVAYANRHAFSYVPQVVRE++RERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 180
           CRVCGRNFY  EKLVNHFKQIHESEHKKRLNQIESA+GSRRVKL+AKYSMKIQKYKNAAR
Sbjct: 121 CRVCGRNFYMYEKLVNHFKQIHESEHKKRLNQIESARGSRRVKLIAKYSMKIQKYKNAAR 180

Query: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 240
           DVLTP+ GYGLADELKRAGFFVKTVSDKPEAADVELRNDMVE+MDRRRAECLVLVSDDSD
Sbjct: 181 DVLTPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRRAECLVLVSDDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVD----ENMTNGDSGAWWDLRSDAETE 360
           LKRLEWTYNPQLEKEV GLDDD+GED++VE+GSVD    E M N D GAWWDL SDAET+
Sbjct: 301 LKRLEWTYNPQLEKEVSGLDDDIGEDDNVEEGSVDGGLCEIMQNNDRGAWWDLSSDAETD 360

Query: 361 AVSSRSCK 365
            VSS S K
Sbjct: 361 TVSSPSWK 368

BLAST of Carg25272 vs. ExPASy TrEMBL
Match: A0A1S3BKT2 (uncharacterized protein LOC103490929 OS=Cucumis melo OX=3656 GN=LOC103490929 PE=4 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 6.2e-181
Identity = 327/368 (88.86%), Postives = 345/368 (93.75%), Query Frame = 0

Query: 1   MIAFIRFRNLSFHFRKETELIRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60
           MI+F+RFRNLS+ FR ET+L+RRFHSGTN KS SPDSS S VAIFWDLDNKPPKSLPPY+
Sbjct: 1   MISFVRFRNLSYKFRNETDLVRRFHSGTNPKSNSPDSSYSTVAIFWDLDNKPPKSLPPYQ 60

Query: 61  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLK AAASFGAVRYMVAYANRHAFSYVPQVVRE++RERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 180
           CRVCGRNFY  EKLVNHFKQIHESEHKKRLNQIESA+GSRRVKL+AKYSMKIQKYKNAAR
Sbjct: 121 CRVCGRNFYMYEKLVNHFKQIHESEHKKRLNQIESARGSRRVKLIAKYSMKIQKYKNAAR 180

Query: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 240
           DVLTP+ GYGLADELKRAGFFVKTVSDKPEAADVELRNDMVE+MDRRRAECLVLVSDDSD
Sbjct: 181 DVLTPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRRAECLVLVSDDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVD----ENMTNGDSGAWWDLRSDAETE 360
           LKRLEWTYNPQLEKEV GLDDD+GE+++VE+GSVD    E M N D GAWWDL SDAET+
Sbjct: 301 LKRLEWTYNPQLEKEVSGLDDDIGEEDNVEEGSVDGGLCEIMQNNDRGAWWDLSSDAETD 360

Query: 361 AVSSRSCK 365
            VSS S K
Sbjct: 361 TVSSPSWK 368

BLAST of Carg25272 vs. ExPASy TrEMBL
Match: A0A0A0L708 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G035880 PE=4 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 1.7e-178
Identity = 326/366 (89.07%), Postives = 342/366 (93.44%), Query Frame = 0

Query: 1   MIAFIRFRNLSFHFRKETELIRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60
           M++FIRFRNLS+ FR ET LIR FHSGTN KS SPDSS S VAIFWDLDNKPPKSLPPY+
Sbjct: 52  MLSFIRFRNLSYKFRNETVLIRCFHSGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQ 111

Query: 61  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120
           AAVKL+ AAASFGAVRYMVAYANRHAFSYVPQVVRE++RERKMLNQLERKGVIKSIEPYL
Sbjct: 112 AAVKLRTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 171

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 180
           CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKL+AKYSMKIQKYKNAAR
Sbjct: 172 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAAR 231

Query: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 240
           DVL P+ GYGLADELKRAGFFVKTVSDKPEAADVELRNDMVE+MDRR+AECLVLVSDDSD
Sbjct: 232 DVL-PEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSD 291

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSW+EILMGKAKKEAVSVVGKWKDRDV
Sbjct: 292 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDV 351

Query: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVD----ENMTNGDSGAWWDLRSDAETE 360
           LKRLEWTYNP LEK+V GLDDD+GED+DVE GSVD    ENM N D GAWWDL SDAET+
Sbjct: 352 LKRLEWTYNPPLEKKVSGLDDDIGEDDDVEGGSVDGGLCENMQNNDRGAWWDLSSDAETD 411

Query: 361 AVSSRS 363
            VSS S
Sbjct: 412 TVSSPS 416

BLAST of Carg25272 vs. TAIR 10
Match: AT4G12240.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 427.9 bits (1099), Expect = 7.9e-120
Identity = 214/327 (65.44%), Postives = 260/327 (79.51%), Query Frame = 0

Query: 42  VAIFWDLDNKPPKSLPPYEAAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRER 101
           V ++WDLDNKPP S PPY+AAVKL+ AA+SFG V+ M+AYANRHAFSYVP  VRE+R++R
Sbjct: 40  VGVWWDLDNKPPASFPPYDAAVKLRTAASSFGTVKLMMAYANRHAFSYVPLEVREQRKDR 99

Query: 102 KMLNQLERKGVIKSIEPYLCRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRR 161
           K+LN+LE KG++K  EPY C VC R FYTNEKL+NHFKQIHE+E++KR+ QIES+KG RR
Sbjct: 100 KLLNKLENKGLVKPPEPYFCGVCDRRFYTNEKLINHFKQIHETENQKRMRQIESSKGHRR 159

Query: 162 VKLLAKYSMKIQKYKNAARDVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMV 221
           V+L+AKYSMKI+KYK AAR+VLTPKEGYGLADELKRAGF+VK VSDKP+AAD  L+  +V
Sbjct: 160 VRLVAKYSMKIEKYKRAARNVLTPKEGYGLADELKRAGFWVKMVSDKPDAADKALKEHLV 219

Query: 222 EVMDRRRAECLVLVSDDSDFVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILM 281
           EVMD+R  EC+VLVSDDSDF  +L EAK RCLRTVV+GD N+G LKR AD  +SWKE+ M
Sbjct: 220 EVMDKREVECVVLVSDDSDFAGILWEAKERCLRTVVIGDSNEGALKRVADVAYSWKEVTM 279

Query: 282 GKAKKEAVSVVGKWKDRDVLKRLEWTYNPQLEKEVFG----LDDDMGEDEDVEQGSVDEN 341
           GKAKKE   VVGKWKDRDVLK+LEWTY+P LEKE  G     D +   D+++E G+  E 
Sbjct: 280 GKAKKEVEKVVGKWKDRDVLKKLEWTYDPALEKERGGSCGVWDYEFDYDDEIENGTEVEP 339

Query: 342 MTNGDSGAWWDLRSDAETEAVSSRSCK 365
           +  GD   WW +  D E    SSR+C+
Sbjct: 340 VEIGDGVDWWKI--DTEDGVGSSRTCR 364

BLAST of Carg25272 vs. TAIR 10
Match: AT5G52010.1 (C2H2-like zinc finger protein )

HSP 1 Score: 215.7 bits (548), Expect = 6.2e-56
Identity = 118/242 (48.76%), Postives = 158/242 (65.29%), Query Frame = 0

Query: 42  VAIFWDLDNKPPKSLPPYEAAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRER 101
           V + WDLDNKPP+  PPYEAA  L+  A   G V  + AYANRHAF ++P  V E+RRER
Sbjct: 76  VVVLWDLDNKPPRG-PPYEAATALRKVAEKLGRVVEISAYANRHAFIHLPHWVVEERRER 135

Query: 102 KMLNQLERKGVIKSIEPYLCRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRR 161
           + L+ +ERKG +  I+PY+C VCGR   TN  L  HFKQ+HE E +K++N++ S KG +R
Sbjct: 136 RNLDFMERKGEVTPIDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKVNRMRSLKGKKR 195

Query: 162 VKLLAKYSMKIQKYKNAARDVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMV 221
            K   +Y    +KY  AAR +LTPK GYGL  EL+RAG +VKTV DKP+AAD  ++  + 
Sbjct: 196 QKFKERYVSGNEKYNEAARSLLTPKVGYGLEAELRRAGVYVKTVEDKPQAADWAVKRQIQ 255

Query: 222 EVMDRRRAECLVLVSDDSDFVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILM 281
             M  R  + LVLVSDD DF ++L++A+   L T+VV D+ D  L R+AD    W  +  
Sbjct: 256 HSM-TRGIDWLVLVSDDKDFSDMLRKAREADLGTLVVSDM-DRALGRHADLWVPWSGVEK 314

Query: 282 GK 284
           G+
Sbjct: 316 GE 314

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6577601.13.1e-203100.00hypothetical protein SDJN03_25175, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022965083.18.6e-20198.90uncharacterized protein LOC111465052 [Cucurbita maxima][more]
XP_022923441.11.4e-19897.80uncharacterized protein LOC111431136 [Cucurbita moschata][more]
XP_023553504.14.0e-19897.80uncharacterized protein LOC111810902 [Cucurbita pepo subsp. pepo][more]
TYK19480.14.4e-18189.13Zinc finger family protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1HMT74.1e-20198.90uncharacterized protein LOC111465052 OS=Cucurbita maxima OX=3661 GN=LOC111465052... [more]
A0A6J1E6T96.6e-19997.80uncharacterized protein LOC111431136 OS=Cucurbita moschata OX=3662 GN=LOC1114311... [more]
A0A5D3D7P92.1e-18189.13Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A1S3BKT26.2e-18188.86uncharacterized protein LOC103490929 OS=Cucumis melo OX=3656 GN=LOC103490929 PE=... [more]
A0A0A0L7081.7e-17889.07C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G035880 P... [more]
Match NameE-valueIdentityDescription
AT4G12240.17.9e-12065.44zinc finger (C2H2 type) family protein [more]
AT5G52010.16.2e-5648.76C2H2-like zinc finger protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021139NYN domain, limkain-b1-typePFAMPF01936NYNcoord: 190..271
e-value: 1.1E-9
score: 38.9
NoneNo IPR availableGENE3D3.40.50.1010coord: 37..279
e-value: 6.9E-8
score: 34.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 322..349
NoneNo IPR availablePANTHERPTHR35744FAMILY NOT NAMEDcoord: 12..357
NoneNo IPR availablePANTHERPTHR35744:SF4ZINC FINGER (C2H2 TYPE) FAMILY PROTEINcoord: 12..357
NoneNo IPR availableCDDcd18725PIN_LabA-likecoord: 129..260
e-value: 2.74365E-58
score: 183.302
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 121..142
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 119..147
score: 12.07114
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 118..144

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25272-RACarg25272-RAmRNA