Carg25269 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25269
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Copper ion binding protein
Location	Carg_Chr16: 8457086 .. 8461298 (-)
RNA-Seq Expression	Carg25269
Synteny	Carg25269

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCACGATTGTTTCTGTATTGTGTTTCGTTATACAGGATTTGATTTTACGCTAGGGCTTACCTTTTCCACCTCTGAATCTGCTGCAGACGGAGCCGTGATCGTCACAGGTGTGCATTCGTTTTTATTACCTTCCTTTTATCTGATAATCAATCGGCGTTTCATTTCCCATTTTCTAGAATTGATTCCTGGATCTTCCTTCTGTTGGGTGCCCTAGCGTTTATGCCATTGGTATGGGTTCCATTTTTGAAGATTTTGTGTATCCGATGTCTTCTGTGCTTTATCAATTGCATTTGAATACCGTCCTTTTCCATTTAGCGATAGTTGCTGGAGGGTTTCTGGGTTTGGCAGTGGTATATGTTTAGGCGAATCTGAGTTTACTGCGGTGGGTTTTGAAAATGGGACGATTTAGATAGCTGCTTTTGTTTTCCCTCTATTGTAGGTTATGGTGGACCAGTGGATGTGGATGTGGTCTGTAATTTATGATATATTTAGATGTTCGTTGATTTTGGATGTTGGTTCCATTTGTGTTGGTTTGTAATCAAATTTCGTTTCACTTGGTATCTCCTTTTGCTTGACAAGTCTGTTAGTGTGTATTTGTGTAAACCATCTTGTGGTCAGTAAGGGCAGGGAATGAATTCAATCAATAGTGGCTATCTACTAAGATTTAATATCCTACTAGCTTCTTTGGCATCCAAATGTTATAGATCCAGAAACAAAATAACTTCATAACTGTGAGATCCCGCTTCGGTTGGAGAGGAGAGAACGAAGCATTCCTTATAAGGCGTGGAAACCTCTCCTTAACCAACCTGTTTTAAAACTGTGAGACTGACGACGATACATAACAGGTCAAAGTGGACAATATTTGCTAGCAGTGGGCTTGAGGTGTTACAAATGGTATCAGAGCTAAACATTAGAGGATGTGCCAACGAGAGCGCTGGCCTCCAAGAGGGGTGGATTGTGAGATCCTATATCGGTTGGAGAGGGGAACAAAGCATTCCTTATAAGGGTGTGGAAACCTCTCACTAACAGACGCATTTTTAAAACTATGAGGCTGACGGCGATAGGTAACGGGCCAAATCGGACAATATCTTTTAGCGGTGGGCTTGAGCTGTTACAATAACCCCAAGACAGTTTTATTTCACTCATTCATGCTATTTTCTGTCGATGAAGAATTGAGGTTACTCTTCGATTCACGTGATTCAAACTGGGAAACAACGTGACTGTCCATTTGTATATTAGATTTGGGAATCAATGTGAGAAGAAAAGTGTCCCCTGGCTAGTTAGTCCTTGAGGTGTCTACTGTACAATATTGATTTTCAGCTACTTGGCAACTACCCAATTTGAATTGGTTTTCATAGGTCCTCTAGTTCTCCGGAAACTGCATTAATTGGTCATTCTAATCCTCTATTTGGTATTTGTGCTAACGTTTAGACTGAAAAAGCCCCTTCAGAGTTGTCTTTCTTTACCCTTCTGACTGCGGCTAACTATTTCTGAGATCTGCTTAAAGAGTTTTTTCTACTCTTCTAGAGGCTTTGTTAGTTTATCAACTTTGACGTAAGTCTTCTGCATATTCTGGTTTTAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTTTTTAGGCTTTGGTTGAACTCTAAGATTTTGCAATGGTACACTTAATCATTTTCGTAGTTCATTAATAATTTTTTTGATGATGCAAAATTTGGATGGAGCATATTATCCTTTGACCTTTCTTTGCCCTTGTAGTAGAGGTTTTATTATTGTGTTTGTGATTGATAAACAATGAATATAGTTGTAAAACTTTTAAAAGATATTAGTGTTTAATTTTAAATTAAGAAAGATGGGTGAAGATGCAACACGAACACAGTGACATGTTATTTTCTTAGCAATTAGGAGTTGGGACACAAAATTTGTTTGGTGAAAGTTTACAATGGTCTCGTGTCTATTGTGTTTGACAAATGCTCTGAACATATTCAGTTATGTAAAGACAAGTGCCCGCCACATGCCTAAAGTGCCTAATGAACATTTGAGAGTTCTCTAATTCTTTACAAACATTTCTACTTTTAAGAGTGTTAAGAGTGTTTGATGAATGTCAAACGCGGATACATTATACACTTTAGTTTGAAGGAGCACCATAATTGTTTATTTGCCTATGTTCTTGTATGTTAATGAATATATTGTTGGATTAAACCCTTTCAAGGGATGCGGTTGTAGGACTTGTTTTGCAAATTTTTGACTTCCTTAGAGAGAGAGGATATAGATCATTTATGTGCTTTTATTTGATTTCGAGATTGGTCACTGCAGGGACAATCGGCTTGAAATTACTACGTCCCCAATCCATTAATTGTGATAACATGTTATATTGCATCGCGGATAATTGGATATTCTCTGAAGTCTGGACTCCTTTTCTACTACTAGTGTAATCTTATTCGGTGATTTGGAAGGATGCTTATCTCAAGGTTTTTTTTTTTAATGTGCTGGCCATTTATTTTCATGCCCCCTTGGGTTTATATCGTGGATACTTTTTGTGAGATCCCACATCAATTCAATAGAGGAATGAGTGCCAGCAAAGACGCTGGGTCCTGAAGGAGGGTGAATGGTGAGATCCCTCATTGGTTGGAGAGGAGAACGAAACATGCTTTATCAGGGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAACTTCGAGGGAAAACTCGGGAAGGAAAGTCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCCGTTACACTTTCGGCGGGTCTTTTGTTGTGCCTTCTACAGTTTATGAAATTCTACTAATGTTTTTGTGGGCTACCCTTGTCATGGTTCCAAGAAGATGTTGTGGCTTGCGTTTTCCAGGGTGTTCTTTAGACTCTTTTGGAGTGTGCGGAATGGTTGAATTTTTAGGGACACCTCTTGCTCCTTTGATTGTTTCTTGGATTTGGTTATTCTTATTGCTCTTTTTTGGTGTAAATATAACACTCTTTTAGCAATTGTAGTCTTTCATCATTAAGTAATAACTAGATAACTTTGTAATTTCATGGATGAAATTTTTTCTCTTCTAAAAATCATGATTCCTGTCCTGCTTTTCAGGTAGTCTGCCTAGGAGCATAATGGGTGATTTTTCCATTCAGATTAGTTCAAACCTTGTTAATATGTTAATTGATGATACCGAAAAACCGAAAAGAAAACCGAGAAGAAACAGAACCAAGGAACCCCAAGTAAAGGTTGATCAGAAACATGTATCTGATGATTCTGGGATGCTCAAGGGAAGCACAAGTGATGGATGGCCTCACCAAGCTCCTCCACTCTTTCTTCCCATAATTCCGCCCGTGCATTCTGCCAATCCAGAGCTAGACGCAATCCGATCCATCCTGCAAGAGAGCGAAAGGGTCGTCGAGAAGTTGCAGAAGCAGGAGGACAACATGGTGCAGGAAGTTACTCAAAGGGCAAAGGAACTCCATGACAAGGAGTTCAAGCTCCCTTACCAAAAGCCCATGCCATGCGTGGCTGAGAGTGAAGCTTGCTTTCAATGCTACAAAGATCATCCCAATGACTCTTTGAAATGTGCTCATCTCGTAAAAAGTTTCGAAAACTGTAACCGTCAAGCTCGGCAGAAATTGAGCTCGAGCTCGGTCGAGAAGTAGGATTGCCATCTGCAATGAATCTTCTCTTGTACTGAGAATATTGTGATTCAAGTTCTCACTGAGAAAAGGAAAGAAAAAAACTGATTTAGCCAACAGAAATAACCCAAGACATGACTGTTGGGGGTTCCTTTGATTCAATTTTGTGTGTTGTTTCTTGAATCGTATTGGCCAGCCTTTCTTTTAGGCTCTATGGGTGTACTTATATGTCATTCACTACCGTTCAAATCGGTTCGACTAGATGAGTGAACTCTTCCTCGTATCCTTCATAAAGATGGTTCATGGGGTTTCTTTTGCTTTTGGCATAGTGCCCCTAACGAGAGGCTTGCCAACGTGCGTCTATTATTGAAATCACCCGACTAGAGAGTATCCCATCTTCTGAAAAATCGTGTGATATGGCTTGAACTTGTTGTGTGCGGATTGAATTAGAGCTCATATCTACTTTGAACAAATATTATGTATGTGTAACAGATTTCGCAACGAGCTTAGTTGACTCAATTATTGATAATATAGACTTTCAATTTTGTCCAACGGACTCTTAATATGCATAAAT

mRNA sequence

AAGCACGATTGTTTCTGTATTGTGTTTCGTTATACAGGATTTGATTTTACGCTAGGGCTTACCTTTTCCACCTCTGAATCTGCTGCAGACGGAGCCGTGATCGTCACAGGTAGTCTGCCTAGGAGCATAATGGGTGATTTTTCCATTCAGATTAGTTCAAACCTTGTTAATATGTTAATTGATGATACCGAAAAACCGAAAAGAAAACCGAGAAGAAACAGAACCAAGGAACCCCAAGTAAAGGTTGATCAGAAACATGTATCTGATGATTCTGGGATGCTCAAGGGAAGCACAAGTGATGGATGGCCTCACCAAGCTCCTCCACTCTTTCTTCCCATAATTCCGCCCGTGCATTCTGCCAATCCAGAGCTAGACGCAATCCGATCCATCCTGCAAGAGAGCGAAAGGGTCGTCGAGAAGTTGCAGAAGCAGGAGGACAACATGGTGCAGGAAGTTACTCAAAGGGCAAAGGAACTCCATGACAAGGAGTTCAAGCTCCCTTACCAAAAGCCCATGCCATGCGTGGCTGAGAGTGAAGCTTGCTTTCAATGCTACAAAGATCATCCCAATGACTCTTTGAAATGTGCTCATCTCGTAAAAAGTTTCGAAAACTGTAACCGTCAAGCTCGGCAGAAATTGAGCTCGAGCTCGGTCGAGAAGTAGGATTGCCATCTGCAATGAATCTTCTCTTGTACTGAGAATATTGTGATTCAAGTTCTCACTGAGAAAAGGAAAGAAAAAAACTGATTTAGCCAACAGAAATAACCCAAGACATGACTGTTGGGGGTTCCTTTGATTCAATTTTGTGTGTTGTTTCTTGAATCGTATTGGCCAGCCTTTCTTTTAGGCTCTATGGGTGTACTTATATGTCATTCACTACCGTTCAAATCGGTTCGACTAGATGAGTGAACTCTTCCTCGTATCCTTCATAAAGATGGTTCATGGGGTTTCTTTTGCTTTTGGCATAGTGCCCCTAACGAGAGGCTTGCCAACGTGCGTCTATTATTGAAATCACCCGACTAGAGAGTATCCCATCTTCTGAAAAATCGTGTGATATGGCTTGAACTTGTTGTGTGCGGATTGAATTAGAGCTCATATCTACTTTGAACAAATATTATGTATGTGTAACAGATTTCGCAACGAGCTTAGTTGACTCAATTATTGATAATATAGACTTTCAATTTTGTCCAACGGACTCTTAATATGCATAAAT

Coding sequence (CDS)

ATGGGTGATTTTTCCATTCAGATTAGTTCAAACCTTGTTAATATGTTAATTGATGATACCGAAAAACCGAAAAGAAAACCGAGAAGAAACAGAACCAAGGAACCCCAAGTAAAGGTTGATCAGAAACATGTATCTGATGATTCTGGGATGCTCAAGGGAAGCACAAGTGATGGATGGCCTCACCAAGCTCCTCCACTCTTTCTTCCCATAATTCCGCCCGTGCATTCTGCCAATCCAGAGCTAGACGCAATCCGATCCATCCTGCAAGAGAGCGAAAGGGTCGTCGAGAAGTTGCAGAAGCAGGAGGACAACATGGTGCAGGAAGTTACTCAAAGGGCAAAGGAACTCCATGACAAGGAGTTCAAGCTCCCTTACCAAAAGCCCATGCCATGCGTGGCTGAGAGTGAAGCTTGCTTTCAATGCTACAAAGATCATCCCAATGACTCTTTGAAATGTGCTCATCTCGTAAAAAGTTTCGAAAACTGTAACCGTCAAGCTCGGCAGAAATTGAGCTCGAGCTCGGTCGAGAAGTAG

Protein sequence

MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAKELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK

Homology

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BLAST of Carg25269 vs. NCBI nr
Match: KAG6577605.1 (hypothetical protein SDJN03_25179, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWP 60
           MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWP
Sbjct: 177 MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWP 236

Query: 61  HQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAKELHDKE 120
           HQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAKELHDKE
Sbjct: 237 HQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAKELHDKE 296

Query: 121 FKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK 178
           FKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK
Sbjct: 297 FKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK 353

[Close]

BLAST of Carg25269 vs. NCBI nr
Match: XP_022923446.1 (uncharacterized protein LOC111431139 [Cucurbita moschata] >XP_023551778.1 uncharacterized protein LOC111809636 [Cucurbita pepo subsp. pepo] >XP_023551779.1 uncharacterized protein LOC111809636 [Cucurbita pepo subsp. pepo] >KAG7015652.1 hypothetical protein SDJN02_23289 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWP 60
           MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWP
Sbjct: 1   MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWP 60

Query: 61  HQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAKELHDKE 120
           HQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAKELHDKE
Sbjct: 61  HQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAKELHDKE 120

Query: 121 FKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK 178
           FKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK
Sbjct: 121 FKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK 177

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BLAST of Carg25269 vs. NCBI nr
Match: XP_022965185.1 (uncharacterized protein LOC111465118 [Cucurbita maxima])

HSP 1 Score: 342.4 bits (877), Expect = 2.3e-90
Identity = 173/177 (97.74%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWP 60
           MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSG+LKGSTSDGWP
Sbjct: 37  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGVLKGSTSDGWP 96

Query: 61  HQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAKELHDKE 120
           HQAPPLFLPIIPPVHSANPELDAIRSILQESERVV+KLQKQEDNMVQEVTQRAKELHDKE
Sbjct: 97  HQAPPLFLPIIPPVHSANPELDAIRSILQESERVVDKLQKQEDNMVQEVTQRAKELHDKE 156

Query: 121 FKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK 178
           FKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKL  SSVEK
Sbjct: 157 FKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKL--SSVEK 211

[Close]

BLAST of Carg25269 vs. NCBI nr
Match: XP_038876833.1 (uncharacterized protein LOC120069208 [Benincasa hispida])

HSP 1 Score: 312.0 bits (798), Expect = 3.3e-81
Identity = 157/183 (85.79%), Postives = 171/183 (93.44%), Query Frame = 0


Query: 1   MGDFSIQISSNLVNMLIDDTEKPKRKPRRNR------TKEPQVKVDQKHVSDDSGMLKGS 60
           MGDFSIQISSNLVNMLIDDTEKPKRKPRRNR      +K+PQ+KVDQKH SDDSGMLKGS
Sbjct: 1   MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRSKVPQESKKPQIKVDQKHTSDDSGMLKGS 60

Query: 61  TSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAK 120
           TSDGWP+Q PPLFLPIIPPVHSANPELDAIRS+LQESERVVEKLQKQEDNM++EVTQRAK
Sbjct: 61  TSDGWPNQPPPLFLPIIPPVHSANPELDAIRSVLQESERVVEKLQKQEDNMLKEVTQRAK 120

Query: 121 ELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSS 178
           +LHDKEFKLPYQKPMPC+AES+ACFQCYKDHPN+ LKCA LVK+FENCNRQARQ++  SS
Sbjct: 121 DLHDKEFKLPYQKPMPCLAESQACFQCYKDHPNEILKCARLVKNFENCNRQARQQI--SS 180

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BLAST of Carg25269 vs. NCBI nr
Match: XP_008448899.1 (PREDICTED: uncharacterized protein LOC103490925 [Cucumis melo] >XP_008448900.1 PREDICTED: uncharacterized protein LOC103490925 [Cucumis melo] >TYK19483.1 uncharacterized protein E5676_scaffold443G001380 [Cucumis melo var. makuwa])

HSP 1 Score: 307.0 bits (785), Expect = 1.1e-79
Identity = 153/179 (85.47%), Postives = 166/179 (92.74%), Query Frame = 0


Query: 1   MGDFSIQISSNLVNMLIDDTEKPKRKPRRNR------TKEPQVKVDQKHVSDDSGMLKGS 60
           MGDFSIQISSNLVNMLIDDT+KPKRKPRRNR      +K+PQVKVDQK+ SDDSG LKGS
Sbjct: 1   MGDFSIQISSNLVNMLIDDTDKPKRKPRRNRSKVPQESKKPQVKVDQKNTSDDSGTLKGS 60

Query: 61  TSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAK 120
           TSDGWPHQ PPLFLPIIPPVH AN ELDAIRS+LQESERVVEKLQKQEDNM++EVTQRAK
Sbjct: 61  TSDGWPHQPPPLFLPIIPPVHPANAELDAIRSVLQESERVVEKLQKQEDNMLKEVTQRAK 120

Query: 121 ELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSS 174
           +LHDKEFKLPYQKPMPC+AES+ACFQCYKDHPND LKCA LVK+FENCNRQARQK+SS+
Sbjct: 121 DLHDKEFKLPYQKPMPCMAESQACFQCYKDHPNDYLKCARLVKNFENCNRQARQKISSA 179

[Close]

BLAST of Carg25269 vs. ExPASy TrEMBL
Match: A0A6J1E6U2 (uncharacterized protein LOC111431139 OS=Cucurbita moschata OX=3662 GN=LOC111431139 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.2e-94
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWP 60
           MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWP
Sbjct: 1   MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWP 60

Query: 61  HQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAKELHDKE 120
           HQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAKELHDKE
Sbjct: 61  HQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAKELHDKE 120

Query: 121 FKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK 178
           FKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK
Sbjct: 121 FKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK 177

[Close]

BLAST of Carg25269 vs. ExPASy TrEMBL
Match: A0A6J1HN12 (uncharacterized protein LOC111465118 OS=Cucurbita maxima OX=3661 GN=LOC111465118 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90
Identity = 173/177 (97.74%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWP 60
           MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSG+LKGSTSDGWP
Sbjct: 37  MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGVLKGSTSDGWP 96

Query: 61  HQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAKELHDKE 120
           HQAPPLFLPIIPPVHSANPELDAIRSILQESERVV+KLQKQEDNMVQEVTQRAKELHDKE
Sbjct: 97  HQAPPLFLPIIPPVHSANPELDAIRSILQESERVVDKLQKQEDNMVQEVTQRAKELHDKE 156

Query: 121 FKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSSSVEK 178
           FKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKL  SSVEK
Sbjct: 157 FKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKL--SSVEK 211

[Close]

BLAST of Carg25269 vs. ExPASy TrEMBL
Match: A0A1S3BKT1 (uncharacterized protein LOC103490925 OS=Cucumis melo OX=3656 GN=LOC103490925 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.1e-80
Identity = 153/179 (85.47%), Postives = 166/179 (92.74%), Query Frame = 0


Query: 1   MGDFSIQISSNLVNMLIDDTEKPKRKPRRNR------TKEPQVKVDQKHVSDDSGMLKGS 60
           MGDFSIQISSNLVNMLIDDT+KPKRKPRRNR      +K+PQVKVDQK+ SDDSG LKGS
Sbjct: 1   MGDFSIQISSNLVNMLIDDTDKPKRKPRRNRSKVPQESKKPQVKVDQKNTSDDSGTLKGS 60

Query: 61  TSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAK 120
           TSDGWPHQ PPLFLPIIPPVH AN ELDAIRS+LQESERVVEKLQKQEDNM++EVTQRAK
Sbjct: 61  TSDGWPHQPPPLFLPIIPPVHPANAELDAIRSVLQESERVVEKLQKQEDNMLKEVTQRAK 120

Query: 121 ELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSS 174
           +LHDKEFKLPYQKPMPC+AES+ACFQCYKDHPND LKCA LVK+FENCNRQARQK+SS+
Sbjct: 121 DLHDKEFKLPYQKPMPCMAESQACFQCYKDHPNDYLKCARLVKNFENCNRQARQKISSA 179

[Close]

BLAST of Carg25269 vs. ExPASy TrEMBL
Match: A0A5D3D7J8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001380 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.1e-80
Identity = 153/179 (85.47%), Postives = 166/179 (92.74%), Query Frame = 0


Query: 1   MGDFSIQISSNLVNMLIDDTEKPKRKPRRNR------TKEPQVKVDQKHVSDDSGMLKGS 60
           MGDFSIQISSNLVNMLIDDT+KPKRKPRRNR      +K+PQVKVDQK+ SDDSG LKGS
Sbjct: 1   MGDFSIQISSNLVNMLIDDTDKPKRKPRRNRSKVPQESKKPQVKVDQKNTSDDSGTLKGS 60

Query: 61  TSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAK 120
           TSDGWPHQ PPLFLPIIPPVH AN ELDAIRS+LQESERVVEKLQKQEDNM++EVTQRAK
Sbjct: 61  TSDGWPHQPPPLFLPIIPPVHPANAELDAIRSVLQESERVVEKLQKQEDNMLKEVTQRAK 120

Query: 121 ELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSS 174
           +LHDKEFKLPYQKPMPC+AES+ACFQCYKDHPND LKCA LVK+FENCNRQARQK+SS+
Sbjct: 121 DLHDKEFKLPYQKPMPCMAESQACFQCYKDHPNDYLKCARLVKNFENCNRQARQKISSA 179

[Close]

BLAST of Carg25269 vs. ExPASy TrEMBL
Match: A0A0A0L5M8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G035850 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.7e-79
Identity = 151/179 (84.36%), Postives = 164/179 (91.62%), Query Frame = 0


Query: 1   MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRT------KEPQVKVDQKHVSDDSGMLKGS 60
           MGDFSIQISSNLVNMLIDDTEKPKRKPRRN+       K+PQVKVDQKH SDDSG LKGS
Sbjct: 1   MGDFSIQISSNLVNMLIDDTEKPKRKPRRNKPKVPQEGKKPQVKVDQKHTSDDSGTLKGS 60

Query: 61  TSDGWPHQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAK 120
           TSDGWPHQ  P+FLPIIPPVH AN ELDAIRS+LQ+SERVV+KLQKQEDNM++EVTQRAK
Sbjct: 61  TSDGWPHQPAPIFLPIIPPVHPANAELDAIRSVLQDSERVVDKLQKQEDNMLKEVTQRAK 120

Query: 121 ELHDKEFKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLSSS 174
           +LHDKEFKLPYQKPMPCVAES+ACFQCYKDHPND LKCA LVK+FENCNRQARQK+SS+
Sbjct: 121 DLHDKEFKLPYQKPMPCVAESQACFQCYKDHPNDYLKCASLVKNFENCNRQARQKISSA 179

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BLAST of Carg25269 vs. TAIR 10
Match: AT4G12340.1 (copper ion binding )

HSP 1 Score: 144.4 bits (363), Expect = 8.5e-35
Identity = 78/171 (45.61%), Postives = 120/171 (70.18%), Query Frame = 0


Query: 1   MGDFSIQISSNLVNMLIDDTEKPKRKPRRNRTKEPQVKVDQKHVSDDSGMLKGSTSDGWP 60
           MGDFSIQISS L+N L +  ++PKR+ ++ +   P+V    K  ++     K +     P
Sbjct: 1   MGDFSIQISSKLINQLAEGNDQPKRRAKKTK---PKVSPQSKQKTNQDEEKKPNPVAELP 60

Query: 61  HQAPPLFLPIIPPVHSANPELDAIRSILQESERVVEKLQKQEDNMVQEVTQRAKELHDKE 120
            Q PP F P IPP  +A+ EL++I+S+++ESE+V+EKL+ QE N+V+EVT+RAK+L +KE
Sbjct: 61  MQ-PPFFFP-IPPQGAASTELESIKSVVKESEKVLEKLELQEKNIVREVTERAKDLREKE 120

Query: 121 FKLPYQKPMPCVAESEACFQCYKDHPNDSLKCAHLVKSFENCNRQARQKLS 172
           FK+P  KPMPC ++ EA  +CYK++    LKC+  VKSF++C R++RQ+++
Sbjct: 121 FKIPEPKPMPCSSDHEAWMKCYKENIGSPLKCSGFVKSFQDCARRSRQQVN 166

The following BLAST results are available for this feature:

BLAST of Carg25269 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577605.1	1.7e-93	100.00	hypothetical protein SDJN03_25179, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022923446.1	1.7e-93	100.00	uncharacterized protein LOC111431139 [Cucurbita moschata] >XP_023551778.1 unchar...	[more]
XP_022965185.1	2.3e-90	97.74	uncharacterized protein LOC111465118 [Cucurbita maxima]	[more]
XP_038876833.1	3.3e-81	85.79	uncharacterized protein LOC120069208 [Benincasa hispida]	[more]
XP_008448899.1	1.1e-79	85.47	PREDICTED: uncharacterized protein LOC103490925 [Cucumis melo] >XP_008448900.1 P...	[more]

BLAST of Carg25269 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg25269 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6U2	8.2e-94	100.00	uncharacterized protein LOC111431139 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1HN12	1.1e-90	97.74	uncharacterized protein LOC111465118 OS=Cucurbita maxima OX=3661 GN=LOC111465118...	[more]
A0A1S3BKT1	5.1e-80	85.47	uncharacterized protein LOC103490925 OS=Cucumis melo OX=3656 GN=LOC103490925 PE=...	[more]
A0A5D3D7J8	5.1e-80	85.47	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L5M8	5.7e-79	84.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G035850 PE=4 SV=1	[more]

BLAST of Carg25269 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12340.1	8.5e-35	45.61	copper ion binding	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 81..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..59
None	No IPR available	PANTHER	PTHR47587	OS05G0103500 PROTEIN	coord: 1..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25269-RA	Carg25269-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane