Carg25248 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25248
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	B box-type domain-containing protein
Location	Carg_Chr04: 16873933 .. 16876123 (+)
RNA-Seq Expression	Carg25248
Synteny	Carg25248

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTCAGTTTTCACTCTGCAGCCGCATAAACAGTCAGTCTCTATTGTCTCTTCATTTTTCTTCTCTATCTGATTTCTCTTCTCCTCTTCCCTTTTTCCCAATATATTGAAGAAATTTCCCAGAAATTCGTTGTTTTTTATCGGTTTTTCGACGACCCAGAAGTGGGATTTGCTTCGATTTGAATTGTATATGGTGAGATTTGAGTTTCCTCTGTATTTTGCTGTCTTGGGGATGTTTTTCTCCAGGGGTTTTCCTTTTAATTTCTTCTTTGTCTTGTTCATCATCGAATGTTGTTTTTGGGTGTTATTGGATCACTTTGTTTGAGGCTTTCTTACAGTTTTCCGATTATTGAGGAACATGTTTGGCTGTAATCGTTTGATTTAGAATTTTGTGTTCTGTGTTTTAGATGCTTCAAGTATCGTATAATTTTGGAATTAGGAGTTTAGTTGTTTGATTGTGACTGATTTGAGAGTATAATCTATTGTTTTTATTCAAACAATTGCCAGACCCTAATGATGTTGAATTTGATGATGTTTGATTTGGATTGTTTGGATTTTCATTTTGGCAGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAGCAGATTGGCTTAGTTCCCTATTGCAAAGCAAATTTTTTGGTTCTTGTGTTCATCATCAAAACAATAGAAAAAATGAAAAGAATGTGTTTTGCATAGATTGTGGTATTGCCATCTGCAGGCATTGCTTGATATCTCATTGCATTCATCGGCGTTTACAGATCTGCAAGTATGTTTATCAGTACGTCGTTCGTGTTCCCGACTTGCAGAACCATCTTGATTGTTGCAATATTCAGGTATTCCTTTGTTACCTTCTTAAATTATACAAACTTCTTGTCCTAAAGCTGTCTTTGTCTTGTTAGCTGTTGCTTCTGGTTGCATGTTTTGATCAAATGAATAAGAAGCATTATAAACCATTTTGAAAGCCAAGGAACCATTGAATTCAACCATAAAACAGCACTGTTTTGTGTTTGGCACATTGGAATTTCTTTTAGCCAATGATTAGGTTTGTCAGCAATGTGTTAGTACAAGTAAGAACGAACTACCTACCGTAGGTTGACCTAGTGATCGAGAAGAGATACATAAACAATAAAGAGCTTAGAGCAAATGTGTACGAGTCACAATGGCTAATCGTGTAGGATCTAATGTCCCGTGAATTATCTTGGCAATCAAATATAGTAAGGTCAGTTAGTTGTCTGATAAGAACATTCGAGTTGCAGACACTCGGTTTAGATCAGATAACAGTGATTTAACTTGCTAATCTAAATGTATAGTTTCTTATATCCATCCCCTCCACCTAAGTTGATTATGTTAAAGTTTGGGACTTTGGTTCACCAGACTTATAAGATAAATGGGGAGAAGGCTGTTCATCTGAGTCCCCGGCCACAATCGAAAGACTCGAAACCATCGACAAAATTGAAGTTTGGAGGTACTTGTGAAGCTTGTGGGAGATACATACAAGACTTGCCAAACCGCTTCTGTTCGATCGCTTGCAAAGTAAATAAAACTTTCTTTAACTTGTAGACTCTCATTCACTTGCACATAAATGACATGAAGATGTGCCATTGATGAACTTTTTCAGGTCTCTATGGTTCCAGTGGAACTCAATAATCAAAGCTGTAGATGCATCACATCAAAGTCGGATCCGAACGAGATTTCATGGAAGGAGAATCACAATGTAGAACCCAATACGAGCGAAATGAAATCGTCTATCTCAATGGCTGAATCAACTGAAGAGATCAAAGCATGGCAAGTGAAGTCAGGGTTGAATCCAAGGAAGCTTTTGCATAAAAGGAAGGGCATCCCACATCGATCGCCTTTAAAGTAAAATACCGAAACACTAATTGTGATATCATGATGATGATCTTTGATACCCCTTTTGCTCCCAAACCCACATTTTTTGATATATGAAAGTCCTATAAGCATATAGTTATAGATATCTATATATAATAACATATATTTCACCTCTTGCATTGGCTCTATATTGGATTAGTTGTGCCTTAGATCTTTTTTTTTTCTGTCAATTTTTTGGAGGTTGTATAGAGAAGGATTGATTGTGTTGGTTGTTGAAACAATAATCAAATCATCAACCTTTTGGATTATATCCTTTTGGTTAATCTGATCATCATGTGCTGCTGTCTTGTTTGCTGAGC

mRNA sequence

TATTCAGTTTTCACTCTGCAGCCGCATAAACAGTCAGTCTCTATTGTCTCTTCATTTTTCTTCTCTATCTGATTTCTCTTCTCCTCTTCCCTTTTTCCCAATATATTGAAGAAATTTCCCAGAAATTCGTTGTTTTTTATCGGTTTTTCGACGACCCAGAAGTGGGATTTGCTTCGATTTGAATTGTATATGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAGCAGATTGGCTTAGTTCCCTATTGCAAAGCAAATTTTTTGGTTCTTGTGTTCATCATCAAAACAATAGAAAAAATGAAAAGAATGTGTTTTGCATAGATTGTGGTATTGCCATCTGCAGGCATTGCTTGATATCTCATTGCATTCATCGGCGTTTACAGATCTGCAAGTATGTTTATCAGTACGTCGTTCGTGTTCCCGACTTGCAGAACCATCTTGATTGTTGCAATATTCAGACTTATAAGATAAATGGGGAGAAGGCTGTTCATCTGAGTCCCCGGCCACAATCGAAAGACTCGAAACCATCGACAAAATTGAAGTTTGGAGGTACTTGTGAAGCTTGTGGGAGATACATACAAGACTTGCCAAACCGCTTCTGTTCGATCGCTTGCAAAGTCTCTATGGTTCCAGTGGAACTCAATAATCAAAGCTGTAGATGCATCACATCAAAGTCGGATCCGAACGAGATTTCATGGAAGGAGAATCACAATGTAGAACCCAATACGAGCGAAATGAAATCGTCTATCTCAATGGCTGAATCAACTGAAGAGATCAAAGCATGGCAAGTGAAGTCAGGGTTGAATCCAAGGAAGCTTTTGCATAAAAGGAAGGGCATCCCACATCGATCGCCTTTAAAGTAAAATACCGAAACACTAATTGTGATATCATGATGATGATCTTTGATACCCCTTTTGCTCCCAAACCCACATTTTTTGATATATGAAAGTCCTATAAGCATATAGTTATAGATATCTATATATAATAACATATATTTCACCTCTTGCATTGGCTCTATATTGGATTAGTTGTGCCTTAGATCTTTTTTTTTTCTGTCAATTTTTTGGAGGTTGTATAGAGAAGGATTGATTGTGTTGGTTGTTGAAACAATAATCAAATCATCAACCTTTTGGATTATATCCTTTTGGTTAATCTGATCATCATGTGCTGCTGTCTTGTTTGCTGAGC

Coding sequence (CDS)

ATGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAGCAGATTGGCTTAGTTCCCTATTGCAAAGCAAATTTTTTGGTTCTTGTGTTCATCATCAAAACAATAGAAAAAATGAAAAGAATGTGTTTTGCATAGATTGTGGTATTGCCATCTGCAGGCATTGCTTGATATCTCATTGCATTCATCGGCGTTTACAGATCTGCAAGTATGTTTATCAGTACGTCGTTCGTGTTCCCGACTTGCAGAACCATCTTGATTGTTGCAATATTCAGACTTATAAGATAAATGGGGAGAAGGCTGTTCATCTGAGTCCCCGGCCACAATCGAAAGACTCGAAACCATCGACAAAATTGAAGTTTGGAGGTACTTGTGAAGCTTGTGGGAGATACATACAAGACTTGCCAAACCGCTTCTGTTCGATCGCTTGCAAAGTCTCTATGGTTCCAGTGGAACTCAATAATCAAAGCTGTAGATGCATCACATCAAAGTCGGATCCGAACGAGATTTCATGGAAGGAGAATCACAATGTAGAACCCAATACGAGCGAAATGAAATCGTCTATCTCAATGGCTGAATCAACTGAAGAGATCAAAGCATGGCAAGTGAAGTCAGGGTTGAATCCAAGGAAGCTTTTGCATAAAAGGAAGGGCATCCCACATCGATCGCCTTTAAAGTAA

Protein sequence

MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCIHRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNTSEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK

Homology

[Close]

BLAST of Carg25248 vs. NCBI nr
Match: XP_022963423.1 (uncharacterized protein LOC111463631 [Cucurbita moschata] >XP_023545157.1 uncharacterized protein LOC111804538 [Cucurbita pepo subsp. pepo] >KAG6601888.1 hypothetical protein SDJN03_07121, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032586.1 hypothetical protein SDJN02_06635 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 472.2 bits (1214), Expect = 2.4e-129
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI
Sbjct: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180
           GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180

Query: 181 SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 225
           SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK
Sbjct: 181 SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 224

[Close]

BLAST of Carg25248 vs. NCBI nr
Match: XP_022990994.1 (uncharacterized protein LOC111487719 [Cucurbita maxima])

HSP 1 Score: 469.2 bits (1206), Expect = 2.0e-128
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI
Sbjct: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180
           GTCEACGRYIQDLPNRFCSIACKVSMV VELNNQSCRCITSKSDPNEISWKENHNVEPNT
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVSVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180

Query: 181 SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 225
           SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK
Sbjct: 181 SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 224

[Close]

BLAST of Carg25248 vs. NCBI nr
Match: XP_008467074.1 (PREDICTED: uncharacterized protein LOC103504510 [Cucumis melo])

HSP 1 Score: 421.0 bits (1081), Expect = 6.4e-114
Identity = 200/225 (88.89%), Postives = 214/225 (95.11%), Query Frame = 0


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKI+LKKRK DWL+SLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHC+
Sbjct: 1   MAGCKIFLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQ+HLDCCNIQTYKINGEKAVHL PRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQDHLDCCNIQTYKINGEKAVHLCPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180
           GTCEACGRYIQDLPNRFCSIACKVSMVP+ELNNQ CR I S+S+  +I WKENHN+E NT
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPMELNNQCCRFIDSESNLKDIPWKENHNLEINT 180

Query: 181 SEMK-SSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 225
           SEM+ SSIS+AESTEEIKAW+VK+ LNP+KLLHKRKGIPHRSPLK
Sbjct: 181 SEMESSSISVAESTEEIKAWRVKTILNPKKLLHKRKGIPHRSPLK 225

[Close]

BLAST of Carg25248 vs. NCBI nr
Match: XP_004142823.1 (uncharacterized protein LOC101210438 [Cucumis sativus] >KGN51458.1 hypothetical protein Csa_009445 [Cucumis sativus])

HSP 1 Score: 421.0 bits (1081), Expect = 6.4e-114
Identity = 200/225 (88.89%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRK DWL+SLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHC+
Sbjct: 1   MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQ+HLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQDHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180
           GTCEACGRYIQDLPNRFCSIACKVSMVP+ELNNQ CR + S+ +  +I WKENHN+E NT
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPMELNNQCCRFMDSEPNLKDIPWKENHNLEINT 180

Query: 181 SEMK-SSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 225
           SEM+ SSIS+AESTEEIKAW+VK  LNP+KLLHKRKGIPHRSPLK
Sbjct: 181 SEMESSSISVAESTEEIKAWRVKMVLNPKKLLHKRKGIPHRSPLK 225

[Close]

BLAST of Carg25248 vs. NCBI nr
Match: XP_038875225.1 (uncharacterized protein LOC120067735 [Benincasa hispida])

HSP 1 Score: 420.6 bits (1080), Expect = 8.3e-114
Identity = 201/225 (89.33%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRK DWL+SLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHC+
Sbjct: 1   MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           H+RLQICKYVYQYVVRVPDLQN LDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HQRLQICKYVYQYVVRVPDLQNLLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180
           GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQ+CRCI S+S+   I W ENHN+E NT
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQNCRCIDSESNLKGIPWTENHNLETNT 180

Query: 181 SEMK-SSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 225
           SEM+ SSIS+AESTEEIKAW+VK+ LNP+KLLHKRKGIPHRS LK
Sbjct: 181 SEMESSSISVAESTEEIKAWRVKTVLNPKKLLHKRKGIPHRSHLK 225

[Close]

BLAST of Carg25248 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.3e-28
Identity = 60/137 (43.80%), Postives = 83/137 (60.58%), Query Frame = 0


Query: 11  RKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCIHRRLQICKYV 70
           +K  WL +L   KFF  C +H+  +KNE+NV C+DC  ++C HC+ SH  HR LQ+ +YV
Sbjct: 4   QKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYV 63

Query: 71  YQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRYI 130
           Y  VVR+ DLQ  +DC N+Q Y IN  K V +  RPQ++  K +     G  C +C R +
Sbjct: 64  YHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGA-----GNYCTSCDRSL 123

Query: 131 QDLPNRFCSIACKVSMV 148
           Q+ P   CS+ CKV  V
Sbjct: 124 QE-PYIHCSLGCKVDFV 134

[Close]

BLAST of Carg25248 vs. ExPASy TrEMBL
Match: A0A6J1HHR7 (uncharacterized protein LOC111463631 OS=Cucurbita moschata OX=3662 GN=LOC111463631 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.2e-129
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI
Sbjct: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180
           GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180

Query: 181 SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 225
           SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK
Sbjct: 181 SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 224

[Close]

BLAST of Carg25248 vs. ExPASy TrEMBL
Match: A0A6J1JTJ5 (uncharacterized protein LOC111487719 OS=Cucurbita maxima OX=3661 GN=LOC111487719 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 9.9e-129
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI
Sbjct: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180
           GTCEACGRYIQDLPNRFCSIACKVSMV VELNNQSCRCITSKSDPNEISWKENHNVEPNT
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVSVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180

Query: 181 SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 225
           SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK
Sbjct: 181 SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 224

[Close]

BLAST of Carg25248 vs. ExPASy TrEMBL
Match: A0A0A0KPD0 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G550220 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.1e-114
Identity = 200/225 (88.89%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRK DWL+SLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHC+
Sbjct: 1   MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQ+HLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQDHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180
           GTCEACGRYIQDLPNRFCSIACKVSMVP+ELNNQ CR + S+ +  +I WKENHN+E NT
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPMELNNQCCRFMDSEPNLKDIPWKENHNLEINT 180

Query: 181 SEMK-SSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 225
           SEM+ SSIS+AESTEEIKAW+VK  LNP+KLLHKRKGIPHRSPLK
Sbjct: 181 SEMESSSISVAESTEEIKAWRVKMVLNPKKLLHKRKGIPHRSPLK 225

[Close]

BLAST of Carg25248 vs. ExPASy TrEMBL
Match: A0A1S3CSV3 (uncharacterized protein LOC103504510 OS=Cucumis melo OX=3656 GN=LOC103504510 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.1e-114
Identity = 200/225 (88.89%), Postives = 214/225 (95.11%), Query Frame = 0


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKI+LKKRK DWL+SLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHC+
Sbjct: 1   MAGCKIFLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQ+HLDCCNIQTYKINGEKAVHL PRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQDHLDCCNIQTYKINGEKAVHLCPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180
           GTCEACGRYIQDLPNRFCSIACKVSMVP+ELNNQ CR I S+S+  +I WKENHN+E NT
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPMELNNQCCRFIDSESNLKDIPWKENHNLEINT 180

Query: 181 SEMK-SSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 225
           SEM+ SSIS+AESTEEIKAW+VK+ LNP+KLLHKRKGIPHRSPLK
Sbjct: 181 SEMESSSISVAESTEEIKAWRVKTILNPKKLLHKRKGIPHRSPLK 225

[Close]

BLAST of Carg25248 vs. ExPASy TrEMBL
Match: A0A6J1CYJ3 (uncharacterized protein LOC111015643 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015643 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 196/224 (87.50%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRKADWLSSLLQSKFFGSC HHQNNRKNEKNVFC+DCG+AICRHCLISHCI
Sbjct: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCGHHQNNRKNEKNVFCLDCGVAICRHCLISHCI 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRV DLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180
           GTCEACGRYIQDLPNRFCSIACKVSM PVELN+QS R + S+ +  +++ KENHN E NT
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNT 180

Query: 181 SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 225
           SE++SSISMAESTEEIKAW+ KS LN +KLLHKRKGIPHRSPLK
Sbjct: 181 SEIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK 224

[Close]

BLAST of Carg25248 vs. TAIR 10
Match: AT2G01818.1 (PLATZ transcription factor family protein )

HSP 1 Score: 201.8 bits (512), Expect = 5.7e-52
Identity = 107/221 (48.42%), Postives = 147/221 (66.52%), Query Frame = 0


Query: 9   KKRKAD--WLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHC----LISHCIHR 68
           +KR+++  W+ +LL S+FFG C++H+  RKNEKNVFCIDC + ICRHC      SH +HR
Sbjct: 5   EKRRSEEVWIETLLNSEFFGICMNHKYLRKNEKNVFCIDCNVEICRHCCNTVTDSHFLHR 64

Query: 69  RLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGT 128
           RLQICKYVYQ V+R+ ++QN+ DC  IQTYKINGEKA+HL+ RPQ+KD++PSTK K G +
Sbjct: 65  RLQICKYVYQDVIRLLEIQNYFDCSEIQTYKINGEKAIHLNSRPQAKDARPSTKAKNGAS 124

Query: 129 CEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNTSE 188
           C  C RYIQD PN FCSI+CK+S      + +   C + K + + +  KE+   E +  E
Sbjct: 125 CVTCKRYIQDHPNLFCSISCKISTP----SKKHKFCFSPKLEQSVLE-KEHSTQEGSLEE 184

Query: 189 MKS-SISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSP 223
            KS + S+ + +E+ +         P   + KRKGI  RSP
Sbjct: 185 KKSCTSSLTDVSEDSEVLLSDFSFRPLLRILKRKGISRRSP 220

[Close]

BLAST of Carg25248 vs. TAIR 10
Match: AT2G12646.1 (PLATZ transcription factor family protein )

HSP 1 Score: 126.3 bits (316), Expect = 3.0e-29
Identity = 60/137 (43.80%), Postives = 83/137 (60.58%), Query Frame = 0


Query: 11  RKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCIHRRLQICKYV 70
           +K  WL +L   KFF  C +H+  +KNE+NV C+DC  ++C HC+ SH  HR LQ+ +YV
Sbjct: 4   QKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYV 63

Query: 71  YQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRYI 130
           Y  VVR+ DLQ  +DC N+Q Y IN  K V +  RPQ++  K +     G  C +C R +
Sbjct: 64  YHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGA-----GNYCTSCDRSL 123

Query: 131 QDLPNRFCSIACKVSMV 148
           Q+ P   CS+ CKV  V
Sbjct: 124 QE-PYIHCSLGCKVDFV 134

[Close]

BLAST of Carg25248 vs. TAIR 10
Match: AT3G60670.1 (PLATZ transcription factor family protein )

HSP 1 Score: 122.1 bits (305), Expect = 5.7e-28
Identity = 73/206 (35.44%), Postives = 108/206 (52.43%), Query Frame = 0


Query: 15  WLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCIHRRLQICKYVYQYV 74
           WL  LL+ KFF +C+ H++++KNEKN+ CIDC + IC HCL SH  HR LQI +YVY+ V
Sbjct: 9   WLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYRDV 68

Query: 75  VRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRYIQDLP 134
           +RV D    +DC  IQ Y  N  K V ++ RPQS+  + S     G  C  C R +Q  P
Sbjct: 69  LRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFRGS-----GNICITCDRSLQS-P 128

Query: 135 NRFCSIACKVSMVPVELNNQS-----CRCITSKSDPNEISWKENHNVEPNTSEMKSSISM 194
             FC ++CK+S V +     S     C  +    +    +   +  +EP  S   SS S 
Sbjct: 129 YLFCCLSCKISDVIMRQRGLSGFLRVCNVLDLTDEVTTTT--PSSTLEPTGSNRTSSESS 188

Query: 195 AESTEEIKAWQVKSGLNPRKLLHKRK 216
               E++   Q  +     +++ K++
Sbjct: 189 GNEGEDMFWCQALACTATTEIVRKKR 206

[Close]

BLAST of Carg25248 vs. TAIR 10
Match: AT1G31040.1 (PLATZ transcription factor family protein )

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-26
Identity = 78/233 (33.48%), Postives = 119/233 (51.07%), Query Frame = 0


Query: 12  KADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCIHRRLQICKYVY 71
           K  WL  L+   FF SC  H+  RK+EKNVFC+ C +++C HCL SH  H  LQ+ +YVY
Sbjct: 18  KPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRRYVY 77

Query: 72  QYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRYIQ 131
             VVR+ DL+  +DC  +Q Y ING K + L+ R QS+    S        C  C R +Q
Sbjct: 78  HDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSRAKVSS------NVCFTCDRILQ 137

Query: 132 DLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWK----ENHNVEPNTSEMKSSI 191
           + P  FCS++CKV  +  + ++ S   I  + D ++ +++    + H+     S M+   
Sbjct: 138 E-PFHFCSLSCKVDYLSYQGDDLS--SILYRIDESDFTFEGLRMDGHDQLGEISTMEDGE 197

Query: 192 SMAESTEEI-------KAWQVKS-----------GLNPRKLLHKRKGIPHRSP 223
            +   ++E        K  + KS           G+    L ++RKG PHR+P
Sbjct: 198 DILVISDESEQGNNSHKKEKKKSKKKKPESNYLPGMVLSSLGNRRKGAPHRAP 241

[Close]

BLAST of Carg25248 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein )

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-24
Identity = 74/221 (33.48%), Postives = 114/221 (51.58%), Query Frame = 0


Query: 9   KKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDC-GIAICRHCLISHCIHRRLQIC 68
           + R   WL  LL+ +FF  C  H ++ K+E N++C+DC    +C  CL  H  HR +QI 
Sbjct: 30  ENRWPPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLCLAHHKDHRTIQIR 89

Query: 69  KYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACG 128
           +  Y  V+RV ++Q +LD   IQTY IN  K V L+ RPQ +  K  T      TC+ C 
Sbjct: 90  RSSYHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVT-----NTCKVCY 149

Query: 129 RYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNTSEMKSSI 188
           R + D   RFCS+ CK++              TS+        K   N+   T +  SSI
Sbjct: 150 RSLVDDSFRFCSLGCKIAG-------------TSRGFE-----KGRENLLMETEDSSSSI 209

Query: 189 SMAESTEEIKAWQ-----VKSGLNPRKLLHKRKGIPHRSPL 224
           ++ ++   ++++      + +  N R ++ +RKGIPHRSP+
Sbjct: 210 AIGKNITNLQSFSPSTPPLTTSSNCR-IVKRRKGIPHRSPM 226

The following BLAST results are available for this feature:

BLAST of Carg25248 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963423.1	2.4e-129	100.00	uncharacterized protein LOC111463631 [Cucurbita moschata] >XP_023545157.1 unchar...	[more]
XP_022990994.1	2.0e-128	99.55	uncharacterized protein LOC111487719 [Cucurbita maxima]	[more]
XP_008467074.1	6.4e-114	88.89	PREDICTED: uncharacterized protein LOC103504510 [Cucumis melo]	[more]
XP_004142823.1	6.4e-114	88.89	uncharacterized protein LOC101210438 [Cucumis sativus] >KGN51458.1 hypothetical ...	[more]
XP_038875225.1	8.3e-114	89.33	uncharacterized protein LOC120067735 [Benincasa hispida]	[more]

BLAST of Carg25248 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	4.3e-28	43.80	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg25248 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HHR7	1.2e-129	100.00	uncharacterized protein LOC111463631 OS=Cucurbita moschata OX=3662 GN=LOC1114636...	[more]
A0A6J1JTJ5	9.9e-129	99.55	uncharacterized protein LOC111487719 OS=Cucurbita maxima OX=3661 GN=LOC111487719...	[more]
A0A0A0KPD0	3.1e-114	88.89	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G550220 ...	[more]
A0A1S3CSV3	3.1e-114	88.89	uncharacterized protein LOC103504510 OS=Cucumis melo OX=3656 GN=LOC103504510 PE=...	[more]
A0A6J1CYJ3	1.1e-111	87.50	uncharacterized protein LOC111015643 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Carg25248 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01818.1	5.7e-52	48.42	PLATZ transcription factor family protein	[more]
AT2G12646.1	3.0e-29	43.80	PLATZ transcription factor family protein	[more]
AT3G60670.1	5.7e-28	35.44	PLATZ transcription factor family protein	[more]
AT1G31040.1	1.1e-26	33.48	PLATZ transcription factor family protein	[more]
AT4G17900.1	1.0e-24	33.48	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 68..144 e-value: 5.1E-24 score: 84.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..189
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..223
None	No IPR available	PANTHER	PTHR31065:SF41	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..223
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 28..66 score: 8.944252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25248-RA	Carg25248-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding