Carg25205 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25205
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ethylene-responsive transcription factor ERF017-like
Location	Carg_Chr11: 3450772 .. 3451377 (-)
RNA-Seq Expression	Carg25205
Synteny	Carg25205

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAGCCCTCCTCTCCTCACAAATCCGCCGCCCACAACACGGATTCCCGCTACAAAGGCGTCCGCCGCCGGAAATGGGGCAAATTCGTCTCTGAAATTCGTCTCCCCAATAGCCGCGAACGGATCTGGTTAGGCTCCTATGATTCCGCCGAAAAGGCGGCGCGTGCTTTCGACGCCGCCCTTTTTTGTCTACGTGGCAGCTCCGCTCGCTTCAATTTCCCTAATAACCCACCGGATATTCCCGGTGCTACTCTGCTTTCCCGAGCAGAGATTCAAACCGTCGCCGCCCAATTCGCCAACTCCGACCCATCTCCCTCAACGGAATATTCCCAACCCATCGTCGATTCGCCGTCGCCGTCGGTAGCTTCGGAATTAACAACCGCCGTAACAGAGTGTGATGAAATATCGTCGTTTTTGGATTTTCACACCAACATGGGATTGGGACCGGAGAATTACGGGTCGGAATTCGGGTCTTTTCTGCCCGAGTATAACCCGTTTCTGGATGAAATATTCAATTCTTCTACAGCATCTTGTTTTGATTATGGAGATGAGAATTTTGACGCCATGACCACTCATCAGGATTCGTTTCTGTGGAATTTCTGA

mRNA sequence

ATGGCCAAGCCCTCCTCTCCTCACAAATCCGCCGCCCACAACACGGATTCCCGCTACAAAGGCGTCCGCCGCCGGAAATGGGGCAAATTCGTCTCTGAAATTCGTCTCCCCAATAGCCGCGAACGGATCTGGTTAGGCTCCTATGATTCCGCCGAAAAGGCGGCGCGTGCTTTCGACGCCGCCCTTTTTTGTCTACGTGGCAGCTCCGCTCGCTTCAATTTCCCTAATAACCCACCGGATATTCCCGGTGCTACTCTGCTTTCCCGAGCAGAGATTCAAACCGTCGCCGCCCAATTCGCCAACTCCGACCCATCTCCCTCAACGGAATATTCCCAACCCATCGTCGATTCGCCGTCGCCGTCGGTAGCTTCGGAATTAACAACCGCCGTAACAGAGTGTGATGAAATATCGTCGTTTTTGGATTTTCACACCAACATGGGATTGGGACCGGAGAATTACGGGTCGGAATTCGGGTCTTTTCTGCCCGAGTATAACCCGTTTCTGGATGAAATATTCAATTCTTCTACAGCATCTTGTTTTGATTATGGAGATGAGAATTTTGACGCCATGACCACTCATCAGGATTCGTTTCTGTGGAATTTCTGA

Coding sequence (CDS)

ATGGCCAAGCCCTCCTCTCCTCACAAATCCGCCGCCCACAACACGGATTCCCGCTACAAAGGCGTCCGCCGCCGGAAATGGGGCAAATTCGTCTCTGAAATTCGTCTCCCCAATAGCCGCGAACGGATCTGGTTAGGCTCCTATGATTCCGCCGAAAAGGCGGCGCGTGCTTTCGACGCCGCCCTTTTTTGTCTACGTGGCAGCTCCGCTCGCTTCAATTTCCCTAATAACCCACCGGATATTCCCGGTGCTACTCTGCTTTCCCGAGCAGAGATTCAAACCGTCGCCGCCCAATTCGCCAACTCCGACCCATCTCCCTCAACGGAATATTCCCAACCCATCGTCGATTCGCCGTCGCCGTCGGTAGCTTCGGAATTAACAACCGCCGTAACAGAGTGTGATGAAATATCGTCGTTTTTGGATTTTCACACCAACATGGGATTGGGACCGGAGAATTACGGGTCGGAATTCGGGTCTTTTCTGCCCGAGTATAACCCGTTTCTGGATGAAATATTCAATTCTTCTACAGCATCTTGTTTTGATTATGGAGATGAGAATTTTGACGCCATGACCACTCATCAGGATTCGTTTCTGTGGAATTTCTGA

Protein sequence

MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSPSVASELTTAVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPEYNPFLDEIFNSSTASCFDYGDENFDAMTTHQDSFLWNF

Homology

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BLAST of Carg25205 vs. NCBI nr
Match: KAG6588104.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021989.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409.1 bits (1050), Expect = 2.3e-110
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60
           MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA
Sbjct: 1   MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60

Query: 61  ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP 120
           ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP
Sbjct: 61  ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP 120

Query: 121 SVASELTTAVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPEYNPFLDEIFNSSTASCF 180
           SVASELTTAVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPEYNPFLDEIFNSSTASCF
Sbjct: 121 SVASELTTAVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPEYNPFLDEIFNSSTASCF 180

Query: 181 DYGDENFDAMTTHQDSFLWNF 202
           DYGDENFDAMTTHQDSFLWNF
Sbjct: 181 DYGDENFDAMTTHQDSFLWNF 201

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BLAST of Carg25205 vs. NCBI nr
Match: XP_022927093.1 (ethylene-responsive transcription factor ERF017-like [Cucurbita moschata])

HSP 1 Score: 405.2 bits (1040), Expect = 3.3e-109
Identity = 199/201 (99.00%), Postives = 199/201 (99.00%), Query Frame = 0


Query: 1   MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60
           MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA
Sbjct: 1   MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60

Query: 61  ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP 120
           ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP
Sbjct: 61  ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP 120

Query: 121 SVASELTTAVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPEYNPFLDEIFNSSTASCF 180
           SVASELTTAVTECDEISSFLDFH NMGLGPENYGSEFGSFLPEYNPFLDEIFNSSTA CF
Sbjct: 121 SVASELTTAVTECDEISSFLDFHANMGLGPENYGSEFGSFLPEYNPFLDEIFNSSTAPCF 180

Query: 181 DYGDENFDAMTTHQDSFLWNF 202
           DYGDENFDAMTTHQDSFLWNF
Sbjct: 181 DYGDENFDAMTTHQDSFLWNF 201

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BLAST of Carg25205 vs. NCBI nr
Match: XP_023529879.1 (ethylene-responsive transcription factor ERF017 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 400.2 bits (1027), Expect = 1.0e-107
Identity = 195/201 (97.01%), Postives = 198/201 (98.51%), Query Frame = 0


Query: 1   MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60
           MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA
Sbjct: 1   MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60

Query: 61  ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP 120
           ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP
Sbjct: 61  ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP 120

Query: 121 SVASELTTAVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPEYNPFLDEIFNSSTASCF 180
           S+ASELTTAVTEC+EISSFLDFHTNMGLGP+NYGSEFGSFLPEYNPF DEIFNSSTA CF
Sbjct: 121 SIASELTTAVTECEEISSFLDFHTNMGLGPDNYGSEFGSFLPEYNPFFDEIFNSSTAPCF 180

Query: 181 DYGDENFDAMTTHQDSFLWNF 202
           DYGDENFDAMTTHQD FLWNF
Sbjct: 181 DYGDENFDAMTTHQDLFLWNF 201

[Close]

BLAST of Carg25205 vs. NCBI nr
Match: XP_022968316.1 (ethylene-responsive transcription factor ERF017-like [Cucurbita maxima])

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104
Identity = 192/201 (95.52%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60
           MAKPSSPHKSAAH  DS YKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSA+KAARAFDA
Sbjct: 1   MAKPSSPHKSAAHTRDSPYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSADKAARAFDA 60

Query: 61  ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP 120
           ALFCLRG SARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPST YSQPIVDSPSP
Sbjct: 61  ALFCLRGRSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTAYSQPIVDSPSP 120

Query: 121 SVASELTTAVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPEYNPFLDEIFNSSTASCF 180
           SVASELTT+VTECDEISSFLDFHTNMGL PENYGSEFGSFLPEYNPFLDEIFNSSTA CF
Sbjct: 121 SVASELTTSVTECDEISSFLDFHTNMGLEPENYGSEFGSFLPEYNPFLDEIFNSSTAPCF 180

Query: 181 DYGDENFDAMTTHQDSFLWNF 202
           DYGDENFDAMTTHQDSFLWNF
Sbjct: 181 DYGDENFDAMTTHQDSFLWNF 201

[Close]

BLAST of Carg25205 vs. NCBI nr
Match: XP_038879740.1 (ethylene-responsive transcription factor ERF017-like [Benincasa hispida])

HSP 1 Score: 288.5 bits (737), Expect = 4.4e-74
Identity = 152/206 (73.79%), Postives = 171/206 (83.01%), Query Frame = 0


Query: 1   MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60
           M KPSS   +A   +DSRYKGVRRRKWGK+VSEIRLPNSRERIWLGSYDSA+KAARAFDA
Sbjct: 1   MTKPSSA-AAAVDTSDSRYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAQKAARAFDA 60

Query: 61  ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP 120
           ALFCLRG SARFNFP+NPP+I GA+LLSR EIQ+VAAQFANSDP PS+E ++P VDSPSP
Sbjct: 61  ALFCLRGRSARFNFPDNPPEIAGASLLSRTEIQSVAAQFANSDPPPSSELTRPTVDSPSP 120

Query: 121 SVASELTTAVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPEYNPFLDEIF---NSSTA 180
           S+ SE+TT+V ECDE S F D H  MG G  NYGS+FG F PEYNPF +E+F   +SST 
Sbjct: 121 SLVSEVTTSVIECDERSPFFDLHNAMGSG--NYGSDFGLF-PEYNPFYNEMFINDSSSTT 180

Query: 181 SCFDYGDENFDAMTTHQD--SFLWNF 202
             FDYGDENFDA+TTHQD  SFLWNF
Sbjct: 181 PSFDYGDENFDAITTHQDSSSFLWNF 202

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BLAST of Carg25205 vs. ExPASy Swiss-Prot
Match: Q84QC2 (Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana OX=3702 GN=ERF017 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 7.7e-37
Identity = 95/200 (47.50%), Postives = 119/200 (59.50%), Query Frame = 0


Query: 9   KSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGS 68
           + ++ +  S+YKGVR+RKWGK+VSEIRLPNSRERIWLGSYD+ EKAARAFDAAL+CLRG+
Sbjct: 2   EGSSSSMQSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGN 61

Query: 69  SARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSPSVASELTT 128
           +A+FNFP+NPP I G   LSR+EI+  AA+FANS    S         S          +
Sbjct: 62  NAKFNFPDNPPVISGGRNLSRSEIREAAARFANSAEDDS---------SGGAGYEIRQES 121

Query: 129 AVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPEYNPFLDEIFN-------SSTASCFD 188
           A T  D  S FL     +G G  N+ SEFG F P ++ F DE          S T   + 
Sbjct: 122 ASTSMDVDSEFLSMLPTVGSG--NFASEFGLF-PGFDDFSDEYSGDRFREQLSPTQDYYQ 181

Query: 189 YGDENFDAMTTHQDSFLWNF 202
            G+E +         FLWNF
Sbjct: 182 LGEETY----ADGSMFLWNF 185

[Close]

BLAST of Carg25205 vs. ExPASy Swiss-Prot
Match: Q9S7L5 (Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana OX=3702 GN=ERF018 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 9.7e-32
Identity = 95/209 (45.45%), Postives = 119/209 (56.94%), Query Frame = 0


Query: 1   MAKPSSPHKSAAHNT--DSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAF 60
           M K +   +    NT   S+YKGVR+RKWGK+VSEIRLP+SRERIWLGSYD+ EKAARAF
Sbjct: 1   MVKQAMKEEEKKRNTAMQSKYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAF 60

Query: 61  DAALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANS--DPSPSTEYSQPIVD 120
           DAA FCLRG  A FNFPNNPP I     L+  EIQ  AA+FAN+  D     E S  +  
Sbjct: 61  DAAQFCLRGGDANFNFPNNPPSISVEKSLTPPEIQEAAARFANTFQDIVKGEEESGLVPG 120

Query: 121 S----PSPSVASELTTAVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPEYNPFLDEIF 180
           S     SPS ++ + T+  + D   SFLD      L P N+G  F SF  +++ F     
Sbjct: 121 SEIRPESPSTSASVATSTVDYD--FSFLD------LLPMNFG--FDSFSDDFSGFSGGDR 180

Query: 181 NSSTASCFDYGDENFDAMTTHQDSFLWNF 202
            +      DYG E+       +   LW+F
Sbjct: 181 FTEILPIEDYGGESL----LDESLILWDF 195

[Close]

BLAST of Carg25205 vs. ExPASy Swiss-Prot
Match: Q9C591 (Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana OX=3702 GN=ERF016 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.1e-30
Identity = 66/103 (64.08%), Postives = 80/103 (77.67%), Query Frame = 0


Query: 18  RYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGSSARFNFPNN 77
           +Y GVR+RKWGK+V+EIRLPNSR+RIWLGS+DSAEKAARAFDAAL+CLRG  ARFNFP+N
Sbjct: 6   KYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFPDN 65

Query: 78  PPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP 121
           PP+IPG   L+  +IQ VA++FA  +     E   P    PSP
Sbjct: 66  PPEIPGGRSLTPQQIQVVASRFACEE-----ELLPPEQHHPSP 103

[Close]

BLAST of Carg25205 vs. ExPASy Swiss-Prot
Match: Q6NLD5 (Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana OX=3702 GN=ERF015 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.7e-21
Identity = 60/123 (48.78%), Postives = 81/123 (65.85%), Query Frame = 0


Query: 19  YKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGSSARFNFP-NN 78
           Y+GVR+R WGK+VSEIR+P +  RIWLGSYD+ EKAARA+DAALFC+RG    +NFP + 
Sbjct: 27  YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTDK 86

Query: 79  PPDIPGATL--LSRAEIQTVAAQFANSDPS-PSTEYSQPIVDS-PSPSVASELTTAVTEC 137
            P +P  ++  LS+ +IQT+A  +A+S    PS   + P     PS   AS   +A TE 
Sbjct: 87  KPQLPEGSVRPLSKLDIQTIATNYASSVVHVPSHATTLPATTQVPSEVPASSDVSASTEI 146

[Close]

BLAST of Carg25205 vs. ExPASy Swiss-Prot
Match: Q9CAP4 (Ethylene-responsive transcription factor ERF013 OS=Arabidopsis thaliana OX=3702 GN=ERF013 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.0e-20
Identity = 82/227 (36.12%), Postives = 111/227 (48.90%), Query Frame = 0


Query: 5   SSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFC 64
           S+    +  N   +YKGVR R WG +V+EIR PN + RIWLGSY +AE AARA+DAAL C
Sbjct: 29  SALRHQSCKNKIKKYKGVRMRSWGSWVTEIRAPNQKTRIWLGSYSTAEAAARAYDAALLC 88

Query: 65  LRGSSARFNFPN----NP--PDIPGATLLSRAEIQTVAAQFANSD------PSPSTEYSQ 124
           L+G  A  NFPN    +P   +I   TLLS   IQ VAAQ ANS       PS   ++  
Sbjct: 89  LKGPKANLNFPNITTTSPFLMNIDEKTLLSPKSIQKVAAQAANSSSDHFTPPSDENDHDH 148

Query: 125 PIVDSPSPSVASELTTAVTECDE-----------ISSFLDFHTNMGL-GPENYGSEFGSF 184
                  PS +S   ++  + D            + SF+D++ ++ L  P  Y  EFG  
Sbjct: 149 DDGLDHHPSASSSAASSPPDDDHHNDDDGDLVSLMESFVDYNEHVSLMDPSLY--EFGH- 208

Query: 185 LPEYNPFLDEIFNSSTASCFDYGDENFDAMTTHQDSF------LWNF 202
                   +EIF  +    FDY  +   +  T  D +      LW+F
Sbjct: 209 --------NEIF-FTNGDPFDYSPQLHSSEATMDDFYDDVDIPLWSF 243

[Close]

BLAST of Carg25205 vs. ExPASy TrEMBL
Match: A0A6J1EK17 (ethylene-responsive transcription factor ERF017-like OS=Cucurbita moschata OX=3662 GN=LOC111434026 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.6e-109
Identity = 199/201 (99.00%), Postives = 199/201 (99.00%), Query Frame = 0


Query: 1   MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60
           MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA
Sbjct: 1   MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60

Query: 61  ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP 120
           ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP
Sbjct: 61  ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP 120

Query: 121 SVASELTTAVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPEYNPFLDEIFNSSTASCF 180
           SVASELTTAVTECDEISSFLDFH NMGLGPENYGSEFGSFLPEYNPFLDEIFNSSTA CF
Sbjct: 121 SVASELTTAVTECDEISSFLDFHANMGLGPENYGSEFGSFLPEYNPFLDEIFNSSTAPCF 180

Query: 181 DYGDENFDAMTTHQDSFLWNF 202
           DYGDENFDAMTTHQDSFLWNF
Sbjct: 181 DYGDENFDAMTTHQDSFLWNF 201

[Close]

BLAST of Carg25205 vs. ExPASy TrEMBL
Match: A0A6J1HUJ1 (ethylene-responsive transcription factor ERF017-like OS=Cucurbita maxima OX=3661 GN=LOC111467580 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.2e-105
Identity = 192/201 (95.52%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60
           MAKPSSPHKSAAH  DS YKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSA+KAARAFDA
Sbjct: 1   MAKPSSPHKSAAHTRDSPYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSADKAARAFDA 60

Query: 61  ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP 120
           ALFCLRG SARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPST YSQPIVDSPSP
Sbjct: 61  ALFCLRGRSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTAYSQPIVDSPSP 120

Query: 121 SVASELTTAVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPEYNPFLDEIFNSSTASCF 180
           SVASELTT+VTECDEISSFLDFHTNMGL PENYGSEFGSFLPEYNPFLDEIFNSSTA CF
Sbjct: 121 SVASELTTSVTECDEISSFLDFHTNMGLEPENYGSEFGSFLPEYNPFLDEIFNSSTAPCF 180

Query: 181 DYGDENFDAMTTHQDSFLWNF 202
           DYGDENFDAMTTHQDSFLWNF
Sbjct: 181 DYGDENFDAMTTHQDSFLWNF 201

[Close]

BLAST of Carg25205 vs. ExPASy TrEMBL
Match: A0A6J1D2N9 (ethylene-responsive transcription factor ERF017 OS=Momordica charantia OX=3673 GN=LOC111016441 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 6.5e-71
Identity = 154/203 (75.86%), Postives = 165/203 (81.28%), Query Frame = 0


Query: 1   MAKPSSPHKS--AAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAF 60
           M KPSSP KS  AA   DSRYKGVRRRKWGK+VSEIRLPNSRERIWLGSYDSAEKAARAF
Sbjct: 1   MTKPSSPSKSAAAAATADSRYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAF 60

Query: 61  DAALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSP 120
           DAALFCLRG SARFNFP+NPPDIPGA+LLSRAEIQ+ AA+FANS+P PS+E      DS 
Sbjct: 61  DAALFCLRGRSARFNFPDNPPDIPGASLLSRAEIQSAAAEFANSEPQPSSE------DSA 120

Query: 121 SPSVASELTTAVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPEYNPFLDEIFNSSTAS 180
           S S     TTA  ECDE SSFLD HT M  G ENYGS+FG F PEYNPF +E+FN+S  S
Sbjct: 121 SASG----TTAQIECDERSSFLDLHTAM--GSENYGSDFGLF-PEYNPFFNELFNTSAPS 180

Query: 181 CFDYGDENFDAMTTHQDSFLWNF 202
            FDYGDENFDA TTHQDSFLWNF
Sbjct: 181 -FDYGDENFDA-TTHQDSFLWNF 188

[Close]

BLAST of Carg25205 vs. ExPASy TrEMBL
Match: A0A0A0M292 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G597730 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.2e-70
Identity = 149/209 (71.29%), Postives = 170/209 (81.34%), Query Frame = 0


Query: 1   MAKPSSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60
           M KPSS   +A   +DSRYKGVRRRKWGK+VSEIRLPNSRERIWLGSYDSAEKAARAFDA
Sbjct: 1   MTKPSSA-AAALDTSDSRYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDA 60

Query: 61  ALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQP-IVDSPS 120
           ALFCLRG SARFNFP NPP+IP ATLLSR+EIQ+VAAQFANSDP PS+E+ +P   DSPS
Sbjct: 61  ALFCLRGRSARFNFPQNPPEIPDATLLSRSEIQSVAAQFANSDPIPSSEFHRPTTTDSPS 120

Query: 121 PSVASELTTAVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPEYNPFLDEIF-----NS 180
           PS+ SE+TT+V ECDE S FLD HT M  G +NYG++FG F PEYNPF +E+F     +S
Sbjct: 121 PSLVSEMTTSVIECDERSLFLDLHTAM--GSDNYGTDFGLF-PEYNPFYNELFINSSSSS 180

Query: 181 STASCFDYGDENFDAMTTHQD--SFLWNF 202
           ST  C+DYGDE F+A  THQD  S+LWNF
Sbjct: 181 STIPCYDYGDEIFEA--THQDDSSYLWNF 203

[Close]

BLAST of Carg25205 vs. ExPASy TrEMBL
Match: A0A1S3BRH5 (ethylene-responsive transcription factor ERF017-like OS=Cucumis melo OX=3656 GN=LOC103492391 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 152/214 (71.03%), Postives = 172/214 (80.37%), Query Frame = 0


Query: 1   MAKPSSPHKSAAHNT-DSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFD 60
           M KPSS    AA +T DSRYKGVRRRKWGK+VSEIRLPNSRERIWLGSYDSAEKAARAFD
Sbjct: 1   MTKPSSAAADAAVDTSDSRYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFD 60

Query: 61  AALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPS-PSTEYSQP-IVDS 120
           AALFCLRG SARFNFP+NPPDIPGA+LLSR+EIQ+ AAQFANSDP+ PS+E+ +P   DS
Sbjct: 61  AALFCLRGDSARFNFPDNPPDIPGASLLSRSEIQSAAAQFANSDPTIPSSEFHRPTTADS 120

Query: 121 PSPSVASELTTAVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPE--YNPFLDEIF--- 180
           PSPSV SE+TT+V ECDE S F D HT M  G ENY ++FG F PE  YNPF +E+F   
Sbjct: 121 PSPSVVSEMTTSVIECDERSPFFDLHTAM--GSENYVTDFGLF-PEYSYNPFYNEMFINS 180

Query: 181 --NSSTASCFD-YGDENFDAMTTHQD--SFLWNF 202
             +SST  C+D YGDENF+A  THQD  S+LWNF
Sbjct: 181 SSSSSTIPCYDYYGDENFEA--THQDDSSYLWNF 209

[Close]

BLAST of Carg25205 vs. TAIR 10
Match: AT1G19210.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 5.5e-38
Identity = 95/200 (47.50%), Postives = 119/200 (59.50%), Query Frame = 0


Query: 9   KSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGS 68
           + ++ +  S+YKGVR+RKWGK+VSEIRLPNSRERIWLGSYD+ EKAARAFDAAL+CLRG+
Sbjct: 2   EGSSSSMQSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGN 61

Query: 69  SARFNFPNNPPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSPSVASELTT 128
           +A+FNFP+NPP I G   LSR+EI+  AA+FANS    S         S          +
Sbjct: 62  NAKFNFPDNPPVISGGRNLSRSEIREAAARFANSAEDDS---------SGGAGYEIRQES 121

Query: 129 AVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPEYNPFLDEIFN-------SSTASCFD 188
           A T  D  S FL     +G G  N+ SEFG F P ++ F DE          S T   + 
Sbjct: 122 ASTSMDVDSEFLSMLPTVGSG--NFASEFGLF-PGFDDFSDEYSGDRFREQLSPTQDYYQ 181

Query: 189 YGDENFDAMTTHQDSFLWNF 202
            G+E +         FLWNF
Sbjct: 182 LGEETY----ADGSMFLWNF 185

[Close]

BLAST of Carg25205 vs. TAIR 10
Match: AT1G74930.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 6.9e-33
Identity = 95/209 (45.45%), Postives = 119/209 (56.94%), Query Frame = 0


Query: 1   MAKPSSPHKSAAHNT--DSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAF 60
           M K +   +    NT   S+YKGVR+RKWGK+VSEIRLP+SRERIWLGSYD+ EKAARAF
Sbjct: 1   MVKQAMKEEEKKRNTAMQSKYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAF 60

Query: 61  DAALFCLRGSSARFNFPNNPPDIPGATLLSRAEIQTVAAQFANS--DPSPSTEYSQPIVD 120
           DAA FCLRG  A FNFPNNPP I     L+  EIQ  AA+FAN+  D     E S  +  
Sbjct: 61  DAAQFCLRGGDANFNFPNNPPSISVEKSLTPPEIQEAAARFANTFQDIVKGEEESGLVPG 120

Query: 121 S----PSPSVASELTTAVTECDEISSFLDFHTNMGLGPENYGSEFGSFLPEYNPFLDEIF 180
           S     SPS ++ + T+  + D   SFLD      L P N+G  F SF  +++ F     
Sbjct: 121 SEIRPESPSTSASVATSTVDYD--FSFLD------LLPMNFG--FDSFSDDFSGFSGGDR 180

Query: 181 NSSTASCFDYGDENFDAMTTHQDSFLWNF 202
            +      DYG E+       +   LW+F
Sbjct: 181 FTEILPIEDYGGESL----LDESLILWDF 195

[Close]

BLAST of Carg25205 vs. TAIR 10
Match: AT5G21960.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.2e-31
Identity = 66/103 (64.08%), Postives = 80/103 (77.67%), Query Frame = 0


Query: 18  RYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGSSARFNFPNN 77
           +Y GVR+RKWGK+V+EIRLPNSR+RIWLGS+DSAEKAARAFDAAL+CLRG  ARFNFP+N
Sbjct: 6   KYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFPDN 65

Query: 78  PPDIPGATLLSRAEIQTVAAQFANSDPSPSTEYSQPIVDSPSP 121
           PP+IPG   L+  +IQ VA++FA  +     E   P    PSP
Sbjct: 66  PPEIPGGRSLTPQQIQVVASRFACEE-----ELLPPEQHHPSP 103

[Close]

BLAST of Carg25205 vs. TAIR 10
Match: AT4G31060.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-22
Identity = 60/123 (48.78%), Postives = 81/123 (65.85%), Query Frame = 0


Query: 19  YKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGSSARFNFP-NN 78
           Y+GVR+R WGK+VSEIR+P +  RIWLGSYD+ EKAARA+DAALFC+RG    +NFP + 
Sbjct: 27  YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTDK 86

Query: 79  PPDIPGATL--LSRAEIQTVAAQFANSDPS-PSTEYSQPIVDS-PSPSVASELTTAVTEC 137
            P +P  ++  LS+ +IQT+A  +A+S    PS   + P     PS   AS   +A TE 
Sbjct: 87  KPQLPEGSVRPLSKLDIQTIATNYASSVVHVPSHATTLPATTQVPSEVPASSDVSASTEI 146

[Close]

BLAST of Carg25205 vs. TAIR 10
Match: AT1G77640.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 7.2e-22
Identity = 82/227 (36.12%), Postives = 111/227 (48.90%), Query Frame = 0


Query: 5   SSPHKSAAHNTDSRYKGVRRRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFC 64
           S+    +  N   +YKGVR R WG +V+EIR PN + RIWLGSY +AE AARA+DAAL C
Sbjct: 29  SALRHQSCKNKIKKYKGVRMRSWGSWVTEIRAPNQKTRIWLGSYSTAEAAARAYDAALLC 88

Query: 65  LRGSSARFNFPN----NP--PDIPGATLLSRAEIQTVAAQFANSD------PSPSTEYSQ 124
           L+G  A  NFPN    +P   +I   TLLS   IQ VAAQ ANS       PS   ++  
Sbjct: 89  LKGPKANLNFPNITTTSPFLMNIDEKTLLSPKSIQKVAAQAANSSSDHFTPPSDENDHDH 148

Query: 125 PIVDSPSPSVASELTTAVTECDE-----------ISSFLDFHTNMGL-GPENYGSEFGSF 184
                  PS +S   ++  + D            + SF+D++ ++ L  P  Y  EFG  
Sbjct: 149 DDGLDHHPSASSSAASSPPDDDHHNDDDGDLVSLMESFVDYNEHVSLMDPSLY--EFGH- 208

Query: 185 LPEYNPFLDEIFNSSTASCFDYGDENFDAMTTHQDSF------LWNF 202
                   +EIF  +    FDY  +   +  T  D +      LW+F
Sbjct: 209 --------NEIF-FTNGDPFDYSPQLHSSEATMDDFYDDVDIPLWSF 243

The following BLAST results are available for this feature:

BLAST of Carg25205 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588104.1	2.3e-110	100.00	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022927093.1	3.3e-109	99.00	ethylene-responsive transcription factor ERF017-like [Cucurbita moschata]	[more]
XP_023529879.1	1.0e-107	97.01	ethylene-responsive transcription factor ERF017 [Cucurbita pepo subsp. pepo]	[more]
XP_022968316.1	1.1e-104	95.52	ethylene-responsive transcription factor ERF017-like [Cucurbita maxima]	[more]
XP_038879740.1	4.4e-74	73.79	ethylene-responsive transcription factor ERF017-like [Benincasa hispida]	[more]

BLAST of Carg25205 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84QC2	7.7e-37	47.50	Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9S7L5	9.7e-32	45.45	Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9C591	3.1e-30	64.08	Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q6NLD5	2.7e-21	48.78	Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9CAP4	1.0e-20	36.12	Ethylene-responsive transcription factor ERF013 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Carg25205 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EK17	1.6e-109	99.00	ethylene-responsive transcription factor ERF017-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1HUJ1	5.2e-105	95.52	ethylene-responsive transcription factor ERF017-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1D2N9	6.5e-71	75.86	ethylene-responsive transcription factor ERF017 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0M292	3.2e-70	71.29	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G597730 PE=...	[more]
A0A1S3BRH5	1.1e-67	71.03	ethylene-responsive transcription factor ERF017-like OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of Carg25205 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19210.1	5.5e-38	47.50	Integrase-type DNA-binding superfamily protein	[more]
AT1G74930.1	6.9e-33	45.45	Integrase-type DNA-binding superfamily protein	[more]
AT5G21960.1	2.2e-31	64.08	Integrase-type DNA-binding superfamily protein	[more]
AT4G31060.1	1.9e-22	48.78	Integrase-type DNA-binding superfamily protein	[more]
AT1G77640.1	7.2e-22	36.12	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 19..30 score: 60.91 coord: 41..57 score: 56.36
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 18..81 e-value: 1.4E-33 score: 127.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 17..67 e-value: 5.1E-12 score: 45.8
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 18..75 score: 21.390501
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 17..77 e-value: 5.98669E-31 score: 105.817
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 17..76 e-value: 1.2E-23 score: 85.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR31985:SF171	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF017	coord: 7..201
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 7..201
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 17..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25205-RA	Carg25205-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity