Carg25193 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg25193
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTATA-box-binding protein
LocationCarg_Chr11: 3530634 .. 3535966 (+)
RNA-Seq ExpressionCarg25193
SyntenyCarg25193
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCCTTCCTCTTTTCGTTCTTCGCTTTCGAAACGGAAACTCAAAACTCTCTCCCATTTATAAACCTCTTCTCTTCGTCTCTCTCACATTCCCAGATATAAAACATCTCGATTTTCAAACTCTTCCCGCTCCCCCATCAATCCTTCTACTATTTCTTTCTCATCATCGCAATTTTCCCAGATTTTTTCTCTTCGATCGACGGAAAATTCATCGCTCCACTCTAGGGTTTCCCCATTTGCGAGAGGTCTGTTTTTTTCCCTTAATTTCGTGTGGTTGGTCTTGCGATCAACGGATCGTGTGTGTTGTGGACTATCGGTTGGGTTTTGATCTAGCTTTCATGTCGGTTTTGCGTCTTGCCTTCCTCAGCTGGCTCCTAGGGTTTGTTTAGTTAGATTTGATTGTGTGGGTCGTTGTAGGTACCCCCGGCTGAGGGGTTTTTGTTACCCCACTAATGATTGATCTCTTGGTGGAATGGTCTTGTATGATCCCTGTATTTCGTTTGACCCTTATCGCTAATTTGATTTGGAAAAAAAAAAAATCTTCAAGAGAGTGCGTTCGTGAGTTCCGTACATGATGTATGGATTACTATTTTTAGTTAATCAATGAACATGGAGTCTTGGTTTGTTTATGATTCGAGGATATTTGTTCATGTTTTTGGGCTTGGGCATTGAAATAAACGCGAAAAACGGTGGTTTTGGTACTTTTTTTGAAATAATTATTTTGGAGCAAGAATTTAAGGAGTCGAGTTCCGTCATTGCAGAGATTTACTGTGAGGAATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTCGATCTTAAAAAGCACCCTTCTGGGATTGTTCCTACCCTTCAGTGAGTTCTAACTTTTCCAACCGCTTGTGCCTTCTCTTTGTGTATGATAGCTCGTTTTTGTAGGCCAAATTTTAGCGTTTCATCAGAGTATTAAGTGGTGGGGTTTTTTATTTTCTTACCAATTTAGAACGAGAAATTGATCATGGACGTTTGAAGTGATTTATATCCAGAAATTGGTTTACTTAGGAAAAGACAACAGTTTAACCTTTTGGTCTAAGCGCCATATACACCTCTAATATTGACCTGATTATACTTTAAAATTTGTCGACATTGAATGGCGTAAAATACTCCCAATCTCTTCTCTCCCCCGTCTCTCTTTCTCTCATGCACACACAAACAGGGAACCTAGCTGTAGATTTTGGTAATAAGTGAAACTTAAATCGAAATTCTCTGGATAAGTTGTATCCACCTATAAGTTAAAATGTTTTAGTTTCAAAAAATTGAAAATATGGACTGTTGCAATTGCAATATAAATGAATTTCAACGTAGATCGTAGAATGTGGGGGTTTGCTAACACTTATACTGAAGCAGACAACCTTTCTTCGAAGACTTTAATACAAACAAGGAATTCCCTTTTGTGAAGTACAATGTAGTCATCAAATGTATATTTGTTTTGGATTTTCTACAGGAACTCCTTATATGTACTATATTTTTAATGTTTCTTGTTGAGTGTACAATCTGTTGCATTGTGTCTAGGAACATTGTGTCAACAGTGAATCTGGACTGCAAGTTGGATCTTAAGGCCATTGCTCTGCAAGCCCGCAATGCCGAATACAATCCCAAGGCAAGTGGTGTTTTATGTGCTACTCATCATGGACGTCAAGAATCCCATTTTCAGGGTGAACTATTATTATTTCCTTTTGAATTTGAACTTTTAAGAATCTCAATTTCCATTTCAATGACAGCGTTTTGCTGCTGTTATTATGAGAATAAGGGAGCCAAAAACCACCGCATTGATATTTGCATCTGGGAAGATGGTAAGCCATTTTCTATCTAATTTCCAAATGAGAGGTGATGAGACGAGTTGGCCAGCCCTATGGCAGTTGCTTTCAGTGATTTACTACATTTTTTTTTTCTGACTGTCACAAAAAATCTTTTGTCCATTTTTGTGTTGGACATGGGCAGGGGACAGGTTGACTTGATAAAATTTGATGAGAAAATAGATAAGAAAAGCTAATGGACCAAACATGACTTATCTTATTAAGACTAGTCGTATAAACCCATCTGAAAGAAATCATGATGGGAGGGCCCTCCTTCTTCACTGTTCTGCTACTAGCATATTACATTCTTTTGGTGTTAACTTTACTAGTTTTGTAAATTTTGAAGTATTAGATATATCAATACCCACATATATTGTAAAACAAAATGTTATCCCAATGCATCTGTATCCTACGGTTATTTTAGAAATTGCCATGTTACCATATCTGTATCATGTTGTGTTATCTTGTATCTATGTCCTGTTTTCATGTTCAAGCTTCTTAGATAATCATCTATTTCTACTGGAACCTCTTTTGGTTCAAATTCAAAAGGGAAAAGAACCAACAACAAAGATACGTGTGGACTGATTTAGGTTGATGGTTTAATGAGACAGAGGGAATTTTCCTATTTGATTTGTGGCATAATCGTGTTTCATGTCTATGTGAACCCATGGCATGGCCAATATTTTATTACATAATAATAATCAATCTCAAACCCACATATTGTTGAAGTTATTATGGTTAAGAAGTTCGCATCTCACCTTTTTCCTAGTGAATTAAAAATTTAAAAAAAAAAAATCATGACCTCAATCCAATATTTATGGATTATTCTTTCAATGCTCTTTGCACGAATTTAGGTCAAGGGAGTCTGCTTAATGTGCCACTATAGTTATAAGGATGGATTCTTTTTCTTGTAAATCGGTTGTTGCACTCTCGGAGTATTTTGTCTTAGCTATTCAGATGTATAATGTGGTGTAGGTCTGTACTGGAGCTAAGAGTGAACAGCAGTCAAAATTAGCAGCAAGAAAGGTATTTAATGTCTTTCAGGTGTTCTATCCTAGTTTGTAGAGGTTGTAAAGTCATTTTACACGCCCTGATTCAGTAACACAATTAGTGTCCAGAAACAATGTTTTTAATTTTAAAAATATTTTCACTGAAAACCAAAAAATATGGGCAAAAGAAATTAGGTGTGGAGAATAGTTGATAGTCTTCATCTTATTGTAAAAGAATGTTTGTATGAATAGTTAGTATTTACATATTTAATCGTTGATGTATTCTCTGAGGTTAAATTGTATAGTCAGTTGATGTTCAGGTAAATGATTTTCTTATTAATCTAAAAGCTGTTGGGGCATCTCATGCATTTACACCCTTCTTTTTTAGATGAAGCTATTTTGTATCTGATATTATCTTGTTTCCTCTTTCCAGTATGCCCGAATTATTCAAAAACTTGGTTTTCCTGCCAAGTTTAAGGTATGTGCTTCTCTCCCCCTCGGTAATAATGATAGAGAAAATAAGATGTAGACACAGTTCAGTTTTTAAAAAAACTTCATTATTAAAACTAAATTATGTACACATTTATTCGCACATATTTGCCAATTTCTTGCGTGCATATCACTGCAAATGCCATTGGACAGTCTTTGAGATCCACAATCTTTTACACATATAAATTGCACAGTGAATTACTTCATGATGCGTTTGTTTTTAATCTAGTGCAGGATTTTAAGATTCAGAATATTGTTGGTTCATGCGATGTTAAGTTCCCCATAAGACTTGAGGGTCTTGCATATTCTCACGGTGCCTTTTCAAGTGTAAGCTCTAGGTCTTTATCTTGGTCTCTATGTGTATTTAATGGGAACGTTATATTCCCACACTATTAAATTTGTTAGAGTCTGGACGTCCATTGTTATTCAAGCATTTTTCTACTAGAAATCCTGACCTTTTTTGGTGCTTGACTTGAATGTATATGTACATGTATATGTTCTTTACTATGATTCTTCAATTTCTTTATGTGATTCTGTGATTTGAATTTTTTTCATGAGGAACTAGTACGATAATGATTTTTCATGCCTTAAAAAGTTTGCGATGGTACTGAGGCTTGTGGTGTTCTGAGTGACATAAGCTAAATTATTTGTCGTGATAGTGATTGCTTGAGATGAATGGAATCCTTGAGAGTTATTATTATTTTCAATGTTTAAATTGCCTCATTGTAATTGACATTCCCTATATATTTTATTAGGTTAAACATTATATTTTGATGTTGAACTGGTTAGATATATGGAATATAACTTTATATTAAAACCTTGGTCTCCATTTGTTTTCAGTATGAACCAGAGTTATTTCCTGGACTGATTTATAGGATGAAACAACCAAAGATTGTGCTTCTCATTTTCGTTTCTGGAAAAATAGTTCTCACTGGGGCTAAGGTAATGTTAGATTGCCATTTCCGTTCTCGTTCTTGAAATCAAAGTCTTGTATTTTTCTATCGCTCTGATTTTACCTGGTTAAACAGTGCTTGTGTAGCCTCCCTGTGCTTTGGTTTGACTTGATCTTTCCTCAATTCCTTCAGTTCAGTTTTTCTTAATACAATTATTCTTGTTGAAGTTAGAAGAATTTTAGTTATATTTTGCCTCCTAAATGAGAATGTTTGTAGACATTTTGAAGGATGGAAGAAACTGTTGGTAGATGACAAAAGAATGTTGAGGGTATAGGTAAATAGCTAAAGAGTTTGTAAGCCAGTGGCTACGAATAAGAGTAATGGTAGGGTGAAGGCATAATGATTAGTTATTTTAGTTTGGCCTTGAATTATTTCTGTAGAGGGCTCTCCAAGTTCCTTGACTTTGATAATGGTCAATATAACTTCGCATCAATTATTAAAAATTCAACTCGATGTTGTGGATGTTGTGTGTTTTGAATCCTTCAGGTGAGAGAGGAGACATACACAGCATTTGAGAACATATATCCAGTGCTTACAGAGTTTAGGAAAAACCAGCAATGGTAAGATGCTTCAACCAAAATCATCTTATTGCAATGTTTTCTCTCCCATTTATTCATTTGGACTGAATTTCTTGGTATGTGGAACTGAGTTTAAACGAATTATCTAAAACTCACTCCAAAATAAAACCAAGCCTATTATTGCCTGTCTAAATGGAGTTCTGTTTGCAGATTAAGCCTTCTGGGAGTTGATTTTCCTTCATGCTTTGGTGACAAACAAACTGACTGGCACACTGGACACAAGCTAGCCTAAAAGCAGTGTTACTTATCAAGAGTTCGCTTCCTGTATGAAGATATGGAAGACTTTCGGTTTTTGGCATTAAATGGAGGGCTACTGATAGAGTGTAATAAAAGGTGTGGGGGCGGGGTACTTTAGGGGGCAAATGGATGGGGAAGGAAGGAAGGTAGGAAGGTGTGGGAACTTTTTTTGATGCTGATATCTGTGTGATATTTTATGTGATCAAAGCGGGGGATATGATATTGTGTATAGAACAATTTTTGTTCCATTAACTG

mRNA sequence

AGCCTTCCTCTTTTCGTTCTTCGCTTTCGAAACGGAAACTCAAAACTCTCTCCCATTTATAAACCTCTTCTCTTCGTCTCTCTCACATTCCCAGATATAAAACATCTCGATTTTCAAACTCTTCCCGCTCCCCCATCAATCCTTCTACTATTTCTTTCTCATCATCGCAATTTTCCCAGATTTTTTCTCTTCGATCGACGGAAAATTCATCGCTCCACTCTAGGGTTTCCCCATTTGCGAGAGAGATTTACTGTGAGGAATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTCGATCTTAAAAAGCACCCTTCTGGGATTGTTCCTACCCTTCAGAACATTGTGTCAACAGTGAATCTGGACTGCAAGTTGGATCTTAAGGCCATTGCTCTGCAAGCCCGCAATGCCGAATACAATCCCAAGGCAAGTGGTGTTTTATGTGCTACTCATCATGGACGTCAAGAATCCCATTTTCAGGGTGAACTATTATTATTTCCTTTTGAATTTGAACTTTTAAGAATCTCAATTTCCATTTCAATGACAGCGTTTTGCTGCTGTTATTATGAGAATAAGGGAGCCAAAAACCACCGCATTGATATTTGCATCTGGGAAGATGGTCAAGGGAGTCTGCTTAATGTCTGTACTGGAGCTAAGAGTGAACAGCAGTCAAAATTAGCAGCAAGAAAGTATGCCCGAATTATTCAAAAACTTGGTTTTCCTGCCAAGTTTAAGGATTTTAAGATTCAGAATATTGTTGGTTCATGCGATGTTAAGTTCCCCATAAGACTTGAGGGTCTTGCATATTCTCACGGTGCCTTTTCAAGTTATGAACCAGAGTTATTTCCTGGACTGATTTATAGGATGAAACAACCAAAGATTGTGCTTCTCATTTTCGTTTCTGGAAAAATAGTTCTCACTGGGGCTAAGGTGAGAGAGGAGACATACACAGCATTTGAGAACATATATCCAGTGCTTACAGAGTTTAGGAAAAACCAGCAATGATTAAGCCTTCTGGGAGTTGATTTTCCTTCATGCTTTGGTGACAAACAAACTGACTGGCACACTGGACACAAGCTAGCCTAAAAGCAGTGTTACTTATCAAGAGTTCGCTTCCTGTATGAAGATATGGAAGACTTTCGGTTTTTGGCATTAAATGGAGGGCTACTGATAGAGTGTAATAAAAGGTGTGGGGGCGGGGTACTTTAGGGGGCAAATGGATGGGGAAGGAAGGAAGGTAGGAAGGTGTGGGAACTTTTTTTGATGCTGATATCTGTGTGATATTTTATGTGATCAAAGCGGGGGATATGATATTGTGTATAGAACAATTTTTGTTCCATTAACTG

Coding sequence (CDS)

ATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTCGATCTTAAAAAGCACCCTTCTGGGATTGTTCCTACCCTTCAGAACATTGTGTCAACAGTGAATCTGGACTGCAAGTTGGATCTTAAGGCCATTGCTCTGCAAGCCCGCAATGCCGAATACAATCCCAAGGCAAGTGGTGTTTTATGTGCTACTCATCATGGACGTCAAGAATCCCATTTTCAGGGTGAACTATTATTATTTCCTTTTGAATTTGAACTTTTAAGAATCTCAATTTCCATTTCAATGACAGCGTTTTGCTGCTGTTATTATGAGAATAAGGGAGCCAAAAACCACCGCATTGATATTTGCATCTGGGAAGATGGTCAAGGGAGTCTGCTTAATGTCTGTACTGGAGCTAAGAGTGAACAGCAGTCAAAATTAGCAGCAAGAAAGTATGCCCGAATTATTCAAAAACTTGGTTTTCCTGCCAAGTTTAAGGATTTTAAGATTCAGAATATTGTTGGTTCATGCGATGTTAAGTTCCCCATAAGACTTGAGGGTCTTGCATATTCTCACGGTGCCTTTTCAAGTTATGAACCAGAGTTATTTCCTGGACTGATTTATAGGATGAAACAACCAAAGATTGTGCTTCTCATTTTCGTTTCTGGAAAAATAGTTCTCACTGGGGCTAAGGTGAGAGAGGAGACATACACAGCATTTGAGAACATATATCCAGTGCTTACAGAGTTTAGGAAAAACCAGCAATGA

Protein sequence

MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVLCATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDGQGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKNQQ
Homology
[Close]
BLAST of Carg25193 vs. NCBI nr
Match: KAG7022001.1 (TATA-box-binding protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 503.1 bits (1294), Expect = 1.4e-138
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
           CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG
Sbjct: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 247

[Close]
BLAST of Carg25193 vs. NCBI nr
Match: GAU35392.1 (hypothetical protein TSUD_160430 [Trifolium subterraneum])

HSP 1 Score: 341.3 bits (874), Expect = 7.1e-90
Identity = 186/253 (73.52%), Postives = 199/253 (78.66%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKL+LK+IALQARNAEYNPKAS   
Sbjct: 1   MADQGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKASYRF 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
            A     +E   +   L+F      +R+ I   + A   C Y   G K  R  +    DG
Sbjct: 61  AAVIMRIREP--KTTALIFASGKMAMRVVICYVVNALRICRYVMDGCKGERNRM----DG 120

Query: 121 QGSL------LNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFP 180
           +  +        VCTGAKSE QSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFP
Sbjct: 121 RKRVSLATQRYQVCTGAKSEVQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFP 180

Query: 181 IRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFEN 240
           IRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+ETYTAFEN
Sbjct: 181 IRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFEN 240

Query: 241 IYPVLTEFRKNQQ 248
           IYPVLTEFRKNQQ
Sbjct: 241 IYPVLTEFRKNQQ 247

[Close]
BLAST of Carg25193 vs. NCBI nr
Match: KAA0055733.1 (TATA-box-binding protein isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 337.0 bits (863), Expect = 1.3e-88
Identity = 184/247 (74.49%), Postives = 190/247 (76.92%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASG  
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGRF 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
            A                      ++RI                   +  +    I+  G
Sbjct: 61  AAV---------------------IMRI-------------------REPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 203

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 203

[Close]
BLAST of Carg25193 vs. NCBI nr
Match: KAG4939299.1 (hypothetical protein JHK86_045440 [Glycine max] >KAG4952153.1 hypothetical protein JHK85_046020 [Glycine max] >KAG5099970.1 hypothetical protein JHK82_045022 [Glycine max] >KAG5108573.1 hypothetical protein JHK84_045480 [Glycine max])

HSP 1 Score: 332.0 bits (850), Expect = 4.3e-87
Identity = 180/247 (72.87%), Postives = 193/247 (78.14%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPKA+ + 
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKANVLF 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
                          L+L  F   ++RI                   ++ +    I+  G
Sbjct: 61  V--------------LVLMRFAAVIMRI-------------------RDPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+ETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLT 210

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 210

[Close]
BLAST of Carg25193 vs. NCBI nr
Match: KAG6588117.1 (TATA-box-binding protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 329.3 bits (843), Expect = 2.8e-86
Identity = 181/247 (73.28%), Postives = 187/247 (75.71%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK     
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKR---- 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
                               F   ++RI                   +  +    I+  G
Sbjct: 61  --------------------FAAVIMRI-------------------REPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]
BLAST of Carg25193 vs. ExPASy Swiss-Prot
Match: Q42808 (TATA-box-binding protein OS=Glycine max OX=3847 GN=TBP1 PE=2 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.2e-87
Identity = 177/247 (71.66%), Postives = 187/247 (75.71%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPK     
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKR---- 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
                               F   ++RI                   ++ +    I+  G
Sbjct: 61  --------------------FAAVIMRI-------------------RDPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+ETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]
BLAST of Carg25193 vs. ExPASy Swiss-Prot
Match: P26357 (TATA-box-binding protein OS=Solanum tuberosum OX=4113 GN=TBP PE=2 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.4e-87
Identity = 176/247 (71.26%), Postives = 186/247 (75.30%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK     
Sbjct: 1   MADQGLEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKR---- 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
                               F   ++RI                   +  +    I+  G
Sbjct: 61  --------------------FAAVIMRI-------------------REPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AY+HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+ETYTAFENIYPVLT
Sbjct: 181 AYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]
BLAST of Carg25193 vs. ExPASy Swiss-Prot
Match: P48511 (TATA-box-binding protein OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.3e-86
Identity = 177/247 (71.66%), Postives = 185/247 (74.90%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MA+QGLEG+QPVD  KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK     
Sbjct: 1   MAEQGLEGSQPVDPIKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKR---- 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
                               F   ++RI                   +  +    I+  G
Sbjct: 61  --------------------FAAVIMRI-------------------REPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]
BLAST of Carg25193 vs. ExPASy Swiss-Prot
Match: P50159 (TATA-box-binding protein 2 OS=Zea mays OX=4577 GN=TBP2 PE=2 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.4e-85
Identity = 175/247 (70.85%), Postives = 184/247 (74.49%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MA+ GLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK     
Sbjct: 1   MAEPGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKR---- 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
                               F   ++RI                   +  +    I+  G
Sbjct: 61  --------------------FAAVIMRI-------------------REPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVL+
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLS 200

Query: 241 EFRKNQQ 248
           EFRK QQ
Sbjct: 241 EFRKIQQ 200

[Close]
BLAST of Carg25193 vs. ExPASy Swiss-Prot
Match: P93348 (TATA-box-binding protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 9.3e-85
Identity = 174/247 (70.45%), Postives = 182/247 (73.68%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MA+ GLEG QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK     
Sbjct: 1   MAEVGLEGNQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKR---- 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
                               F   ++RI                   +  +    I+  G
Sbjct: 61  --------------------FAAVIMRI-------------------REPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQ SKLAARKYARIIQKLGF AKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQSSKLAARKYARIIQKLGFDAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+ETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]
BLAST of Carg25193 vs. ExPASy TrEMBL
Match: A0A2Z6NFK2 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_160430 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 3.4e-90
Identity = 186/253 (73.52%), Postives = 199/253 (78.66%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKL+LK+IALQARNAEYNPKAS   
Sbjct: 1   MADQGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKASYRF 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
            A     +E   +   L+F      +R+ I   + A   C Y   G K  R  +    DG
Sbjct: 61  AAVIMRIREP--KTTALIFASGKMAMRVVICYVVNALRICRYVMDGCKGERNRM----DG 120

Query: 121 QGSL------LNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFP 180
           +  +        VCTGAKSE QSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFP
Sbjct: 121 RKRVSLATQRYQVCTGAKSEVQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFP 180

Query: 181 IRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFEN 240
           IRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+ETYTAFEN
Sbjct: 181 IRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFEN 240

Query: 241 IYPVLTEFRKNQQ 248
           IYPVLTEFRKNQQ
Sbjct: 241 IYPVLTEFRKNQQ 247

[Close]
BLAST of Carg25193 vs. ExPASy TrEMBL
Match: A0A5A7UIK5 (TATA-box-binding protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001180 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 6.5e-89
Identity = 184/247 (74.49%), Postives = 190/247 (76.92%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASG  
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGRF 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
            A                      ++RI                   +  +    I+  G
Sbjct: 61  AAV---------------------IMRI-------------------REPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 203

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 203

[Close]
BLAST of Carg25193 vs. ExPASy TrEMBL
Match: A0A6J1JDU6 (TATA-box-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111484910 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.4e-86
Identity = 181/247 (73.28%), Postives = 187/247 (75.71%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK     
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKR---- 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
                               F   ++RI                   +  +    I+  G
Sbjct: 61  --------------------FAAVIMRI-------------------REPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]
BLAST of Carg25193 vs. ExPASy TrEMBL
Match: A0A6J1H9G6 (TATA-box-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111461727 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.4e-86
Identity = 181/247 (73.28%), Postives = 187/247 (75.71%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK     
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKR---- 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
                               F   ++RI                   +  +    I+  G
Sbjct: 61  --------------------FAAVIMRI-------------------REPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]
BLAST of Carg25193 vs. ExPASy TrEMBL
Match: A0A0A0LWT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599390 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.4e-86
Identity = 181/247 (73.28%), Postives = 187/247 (75.71%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK     
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKR---- 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
                               F   ++RI                   +  +    I+  G
Sbjct: 61  --------------------FAAVIMRI-------------------REPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]
BLAST of Carg25193 vs. TAIR 10
Match: AT1G55520.1 (TATA binding protein 2 )

HSP 1 Score: 306.2 bits (783), Expect = 2.4e-83
Identity = 169/247 (68.42%), Postives = 179/247 (72.47%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQG EG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK     
Sbjct: 1   MADQGTEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKR---- 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
                               F   ++RI                   +  +    I+  G
Sbjct: 61  --------------------FAAVIMRI-------------------REPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSE  SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAK+REETYTAFENIYPVL 
Sbjct: 181 AYSHSAFSSYEPELFPGLIYRMKLPKIVLLIFVSGKIVITGAKMREETYTAFENIYPVLR 200

Query: 241 EFRKNQQ 248
           EFRK QQ
Sbjct: 241 EFRKVQQ 200

[Close]
BLAST of Carg25193 vs. TAIR 10
Match: AT1G55520.2 (TATA binding protein 2 )

HSP 1 Score: 306.2 bits (783), Expect = 2.4e-83
Identity = 169/247 (68.42%), Postives = 179/247 (72.47%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQG EG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK     
Sbjct: 1   MADQGTEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKR---- 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
                               F   ++RI                   +  +    I+  G
Sbjct: 61  --------------------FAAVIMRI-------------------REPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSE  SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAK+REETYTAFENIYPVL 
Sbjct: 181 AYSHSAFSSYEPELFPGLIYRMKLPKIVLLIFVSGKIVITGAKMREETYTAFENIYPVLR 200

Query: 241 EFRKNQQ 248
           EFRK QQ
Sbjct: 241 EFRKVQQ 200

[Close]
BLAST of Carg25193 vs. TAIR 10
Match: AT3G13445.1 (TATA binding protein 1 )

HSP 1 Score: 301.2 bits (770), Expect = 7.6e-82
Identity = 165/247 (66.80%), Postives = 178/247 (72.06%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           M DQGLEG+ PVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK     
Sbjct: 1   MTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKR---- 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
                               F   ++RI                   +  +    I+  G
Sbjct: 61  --------------------FAAVIMRI-------------------REPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAK+R+ETY AFENIYPVL+
Sbjct: 181 AYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLS 200

Query: 241 EFRKNQQ 248
           EFRK QQ
Sbjct: 241 EFRKIQQ 200

[Close]
BLAST of Carg25193 vs. TAIR 10
Match: AT3G13445.2 (TATA binding protein 1 )

HSP 1 Score: 264.6 bits (675), Expect = 7.9e-71
Identity = 147/224 (65.62%), Postives = 157/224 (70.09%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           M DQGLEG+ PVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK     
Sbjct: 1   MTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKR---- 60

Query: 61  CATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDG 120
                               F   ++RI                   +  +    I+  G
Sbjct: 61  --------------------FAAVIMRI-------------------REPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 177

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV 225
           AYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAKV
Sbjct: 181 AYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKV 177

[Close]
BLAST of Carg25193 vs. TAIR 10
Match: AT3G13440.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.3e-04
Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = 0 

Query: 1  MADQGLEGAQPVDLKKHPSGIVPT 25
          MADQGLE + P+DL KHPSGIVPT
Sbjct: 1  MADQGLEESNPMDLSKHPSGIVPT 24

The following BLAST results are available for this feature:
BLAST of Carg25193 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7022001.11.4e-138100.00TATA-box-binding protein [Cucurbita argyrosperma subsp. argyrosperma][more]
GAU35392.17.1e-9073.52hypothetical protein TSUD_160430 [Trifolium subterraneum][more]
KAA0055733.11.3e-8874.49TATA-box-binding protein isoform X2 [Cucumis melo var. makuwa][more]
KAG4939299.14.3e-8772.87hypothetical protein JHK86_045440 [Glycine max] >KAG4952153.1 hypothetical prote... [more]
KAG6588117.12.8e-8673.28TATA-box-binding protein, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Carg25193 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q428081.2e-8771.66TATA-box-binding protein OS=Glycine max OX=3847 GN=TBP1 PE=2 SV=1[more]
P263573.4e-8771.26TATA-box-binding protein OS=Solanum tuberosum OX=4113 GN=TBP PE=2 SV=1[more]
P485111.3e-8671.66TATA-box-binding protein OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1[more]
P501591.4e-8570.85TATA-box-binding protein 2 OS=Zea mays OX=4577 GN=TBP2 PE=2 SV=1[more]
P933489.3e-8570.45TATA-box-binding protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
BLAST of Carg25193 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2Z6NFK23.4e-9073.52Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_160430 PE=3 SV... [more]
A0A5A7UIK56.5e-8974.49TATA-box-binding protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A6J1JDU61.4e-8673.28TATA-box-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111484910 PE=3 SV=1[more]
A0A6J1H9G61.4e-8673.28TATA-box-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111461727 PE=3 SV=1[more]
A0A0A0LWT41.4e-8673.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599390 PE=3 SV=1[more]
BLAST of Carg25193 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G55520.12.4e-8368.42TATA binding protein 2 [more]
AT1G55520.22.4e-8368.42TATA binding protein 2 [more]
AT3G13445.17.6e-8266.80TATA binding protein 1 [more]
AT3G13445.27.9e-7165.63TATA binding protein 1 [more]
AT3G13440.11.3e-0479.17S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000814TATA-box binding proteinPRINTSPR00686TIFACTORIIDcoord: 49..68
score: 32.34
coord: 25..40
score: 78.59
IPR000814TATA-box binding proteinPFAMPF00352TBPcoord: 159..241
e-value: 2.6E-32
score: 110.6
coord: 24..150
e-value: 1.4E-13
score: 50.6
IPR000814TATA-box binding proteinPANTHERPTHR10126TATA-BOX BINDING PROTEINcoord: 1..55
coord: 127..247
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 30..158
e-value: 8.2E-26
score: 91.4
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 159..246
e-value: 3.9E-38
score: 131.1
NoneNo IPR availablePANTHERPTHR10126:SF48TATA-BOX-BINDING PROTEIN 1coord: 127..247
NoneNo IPR availablePANTHERPTHR10126:SF48TATA-BOX-BINDING PROTEIN 1coord: 1..55
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 159..245
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 21..161
IPR030491TATA-box binding protein, conserved sitePROSITEPS00351TFIIDcoord: 190..239
IPR033710TATA-box binding protein, eukaryoticCDDcd04516TBP_eukaryotescoord: 22..242
e-value: 1.70474E-100
score: 287.964

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25193-RACarg25193-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006352 DNA-templated transcription, initiation
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0016251 RNA polymerase II general transcription initiation factor activity