Carg25112 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg25112
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionheterogeneous nuclear ribonucleoprotein 1
LocationCarg_Chr13: 5371999 .. 5375441 (-)
RNA-Seq ExpressionCarg25112
SyntenyCarg25112
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCTGGCAAGCTTTTCATTGGTGGGATTTCGTGGGACACGGATGAAGATCGTCTTCGAGAGTATTTTCAGAGCTTTGGGGAAGTGGTGGAGGTGATGATCATGAGGGATCGAACCACTGGCCGTGCTCGTGGCTTTGGTTTCGTTGTCTTTGCTGACCCTGTTGTTGCAGCAAGAGTTGTATTGGAAAAGCATGTGATTGATGGAAGAACTGTAAGTCTTGTCTATTGTTCTTGATTTCATTGATCTTTCCCATTTGTATTGGAAGCTTTAGATGTCGTTCATGGCTTGTTCGAGTTTGTGTTCTGATTTGATTTTGCGTGTTGATATGCTCGTGGAAGGATTAAGGTTTTCCCGATGTTCTTTGGTGTTCATCGTGATTCGAACTTATTACAATTCTTCAGTTTTTGTGGAAGTATGATGCCTATGTATGTGCTCGGAATGTTAATGGGTTCGCTTAGAATCAATTGCTTATATAACGTGAAAAATAACGTTTAAGAGTTTGCTCCTTGGTTTTGTTAGAAAGTTTGAATATCTGAAGTGTGAGATCTCGTATTGGTTGGGGAGGAGAATGAAACATTCTTTATAAAGGTGTGAAAACCTCTCTCTAGTAGACACGTTTTAAAAACCTTGAGGGAAAGCCCAAAGAGGACAATATCTGCTAACAGTGGAGTTGGGCTGTTACAGTTGATATCAGAGCCAGACACGGGAGGGCGTGCCAATGAGGACACTGGATCCTGAAGTGGGTGGATTGTGAGATCACACATCGGTTGAGGAGAAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCGTATCAAACACGTTTTAAAAACCTTAAGGGGAAGCCCGAAAGGGAAAGCCAAAAAGGACAATATCTGCTAGCGGTGGACTTGGGCTGTTACGTAAAGAATGCGGTAGATAGATCCTAAAGCTATGCCAATTGTTATCTCATAAAGTTCGTGTATGCACGGACACTAGGATTTATGTGTGATGATCACCACTTGAATTACAATGATATGTTCCGTTGCATCTCGACTTCTATTTGTACCGGTAACGAGAGTAAACTCTATCATTTTCATGTTTAGATGTTTATTTTTTTTTTCAGGTTGAAGCAAAGAAGGCCGTTCCTCGAGACGATCAAAACGTTTTGAGCAGGAACAATACCGGTATCCTTGGGTCACCAGGTCCTACTCGCACGAAAAAGATATTCGTAGGAGGTTTGGCATCAACTGTTACGGAGAGTGACTTCAAAACGTATTTTGATCAGTTTGGAACAATCACAGACGTCGTGGTGATGTACGATCATAATACTCAGAGACCGAGAGGTTTCGGATTTATCACTTACGAGTCGGAGGAATCGGTGGAGAAAGTTTTATACAAAACTTTTCATGAACTCAATGGTAAAATGGTTGAGGTTAAGAGGGCTGTTCCAAAGGAATCATCACCAGTGCCAAACCGAAGTCAATTAGGTGCATACCCTTATGGTTTTGGTAGAGTTGGTAGCTATTTAAATGGCTATAATCAAGGATATAACCCGACCTCGGTTGGGGCATATGGATTGAGATCTGATGATAGGTTTAGTCCTGTTACAGTTGGTCGGGGTGGACTTTCTCCGATCAGTCCTGGTTATGGAATCGGGCTAAATCTCGATACAGGGTTGAACCCGAACTATGGGACAGGTCTCAATGTTGGCTCTAACCTTAGCTATGGACGAGTAATGAGCCCTTCATATGGTGGAAATTTGAATAGGTATGGTAGCCCGAACCCCATGGTGTATGGTGGTGGCAATGGAGGTAATGGTTCGATTTTAAGCTCGTCGGTTCAGAATCTGTGGGGAAACGTCGGGAACTCTGTTGGTACAAACTCGTCACACTTGAGGACTTTTCCTGGCTCTGGTGGTGTGCATACAGGAACTAATTCGTTGAACGGTATCGGAGGGCTTTGGGGTGCTTCTGCAAGCCTAGTTCATGGGGAACATTCTGGTTCTCCATTCAATGCTGTTAATCTTGACTTTGCGAGCGGCGATGGCAGCTTAACGTCGGGAACGACTGTAGGTTATGCTAGAAGCGTTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATATATGATGAGGTTCATGGGAACAATGATGAAGGAAACTCATTTTATGGGCATTCCAGTTGGCAGTTGTTACCGACCGAGCTCGAGGATTCTTCGTCGGTTGGTTTCGGGCTTGGGAATGCAGCTTCGGATGTTATTAGTAGAAACAATGGTGGTTATACTGTCGGATATGGTGTTTCTAATAGACAATCTAATAGAGGTGAGTCTTTCCTTTTTCTAGCTTTATGATGAATGATCTTGTTTTTGTGGATTCCTAATGTTCTGTCCTCCTAAATGTTAGACTAGTAAACGATGCGTTCTACGACTGGATAACGTTTGCTTTTTCTAAGAAGTTGTTCGTAGTCCCTATTCCCTAAGCTTTTCAATGCAAGTTAGCTCACCGCTAGCAGATATTGTTCTCTTTGGGCTTTCCTTTAAGGTTTTCAAAACATGTCTGCTAGGGAGAGGTTTCGATACTCTTATAGAGAATGTGTCATTCTCTTCCCCAACCGATGTGGGATCTCACAACCCACCCTCCTCTCCCTTCGAGGCGCAGCGTTCTCACTGGCACTCGTTCCCTTCACCAATCGATGTGGAACTCCTCAATTCACCCTCCTTCAGGGTCCAGCGTCCTTGCTGCCACACCGCCTCATGTCCACCCCCCTTTCGGGATCAACCACCTCACTGGTACATCGCCCGGTGTCTGACTCTGATACCATTTGTAACAATCCAAGCCCAACCCCACTAGCAGATATTGTCCTTTTTAGGCTTTCCCTCAAGGTTTTTAAAACACCTATGCTAGGGAGAGGTTTCCATACCCTTATAGAGAATGTGTCGTTCTCTTCTCCAATCGATGTGGGATCTCACAACCCACCCCCCTCCCCCCTTCGGGGCCCAGCGTCCTTCTTCAGGGTTCAGCGTCCTTGCTGCCACACCGCCTCATGTCCACCCCCCTTCTGGGCTCAGCCACCTCACTGGCACATCGCCCGATGTCTAGCTCTGATACCATTTGTAACAATCCAAGCCCACCACTAGTAGATATTGTCCTCTTTGGACTTTTCCTTCCAAACTTCCCCTCAAGGTTTTTAAAACGCGTCTGTTAAGGAGAGGTTTCCACACCCTTATTAAGAATGCTTCATTCTCCTGTCCAACCGATGTGGGATCTCACCCTACAAATCTAAGAACTAAACCCATTCCTAAGCTTTTGGGGAACTTGAAATCATTAAAGCTCATGATCTTCTCCCAACTAGACTCAATTATTCGGTTAGAAATCTCGAACAGAGGTGGAACAAAAGCTGATTGGTAAAATGTTTGATTGATGATTCAGGAATTGCTGCTTAG

mRNA sequence

ATGGATCCTGGCAAGCTTTTCATTGGTGGGATTTCGTGGGACACGGATGAAGATCGTCTTCGAGAGTATTTTCAGAGCTTTGGGGAAGTGGTGGAGGTGATGATCATGAGGGATCGAACCACTGGCCGTGCTCGTGGCTTTGGTTTCGTTGTCTTTGCTGACCCTGTTGTTGCAGCAAGAGTTGTATTGGAAAAGCATGTGATTGATGGAAGAACTGTTGAAGCAAAGAAGGCCGTTCCTCGAGACGATCAAAACGTTTTGAGCAGGAACAATACCGGTATCCTTGGGTCACCAGGTCCTACTCGCACGAAAAAGATATTCGTAGGAGGTTTGGCATCAACTGTTACGGAGAGTGACTTCAAAACGTATTTTGATCAGTTTGGAACAATCACAGACGTCGTGGTGATGTACGATCATAATACTCAGAGACCGAGAGGTTTCGGATTTATCACTTACGAGTCGGAGGAATCGGTGGAGAAAGTTTTATACAAAACTTTTCATGAACTCAATGGTAAAATGGTTGAGGTTAAGAGGGCTGTTCCAAAGGAATCATCACCAGTGCCAAACCGAAGTCAATTAGGTGCATACCCTTATGGTTTTGGTAGAGTTGGTAGCTATTTAAATGGCTATAATCAAGGATATAACCCGACCTCGGTTGGGGCATATGGATTGAGATCTGATGATAGGTTTAGTCCTGTTACAGTTGGTCGGGGTGGACTTTCTCCGATCAGTCCTGGTTATGGAATCGGGCTAAATCTCGATACAGGGTTGAACCCGAACTATGGGACAGGTCTCAATGTTGGCTCTAACCTTAGCTATGGACGAGTAATGAGCCCTTCATATGGTGGAAATTTGAATAGGTATGGTAGCCCGAACCCCATGGTGTATGGTGGTGGCAATGGAGGTAATGGTTCGATTTTAAGCTCGTCGGTTCAGAATCTGTGGGGAAACGTCGGGAACTCTGTTGGTACAAACTCGTCACACTTGAGGACTTTTCCTGGCTCTGGTGGTGTGCATACAGGAACTAATTCGTTGAACGGTATCGGAGGGCTTTGGGGTGCTTCTGCAAGCCTAGTTCATGGGGAACATTCTGGTTCTCCATTCAATGCTGTTAATCTTGACTTTGCGAGCGGCGATGGCAGCTTAACGTCGGGAACGACTGTAGGTTATGCTAGAAGCGTTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATATATGATGAGGTTCATGGGAACAATGATGAAGGAAACTCATTTTATGGGCATTCCAGTTGGCAGTTGTTACCGACCGAGCTCGAGGATTCTTCGTCGGTTGGTTTCGGGCTTGGGAATGCAGCTTCGGATGTTATTAGTAGAAACAATGGTGGTTATACTGTCGGATATGGTGTTTCTAATAGACAATCTAATAGAGGAATTGCTGCTTAG

Coding sequence (CDS)

ATGGATCCTGGCAAGCTTTTCATTGGTGGGATTTCGTGGGACACGGATGAAGATCGTCTTCGAGAGTATTTTCAGAGCTTTGGGGAAGTGGTGGAGGTGATGATCATGAGGGATCGAACCACTGGCCGTGCTCGTGGCTTTGGTTTCGTTGTCTTTGCTGACCCTGTTGTTGCAGCAAGAGTTGTATTGGAAAAGCATGTGATTGATGGAAGAACTGTTGAAGCAAAGAAGGCCGTTCCTCGAGACGATCAAAACGTTTTGAGCAGGAACAATACCGGTATCCTTGGGTCACCAGGTCCTACTCGCACGAAAAAGATATTCGTAGGAGGTTTGGCATCAACTGTTACGGAGAGTGACTTCAAAACGTATTTTGATCAGTTTGGAACAATCACAGACGTCGTGGTGATGTACGATCATAATACTCAGAGACCGAGAGGTTTCGGATTTATCACTTACGAGTCGGAGGAATCGGTGGAGAAAGTTTTATACAAAACTTTTCATGAACTCAATGGTAAAATGGTTGAGGTTAAGAGGGCTGTTCCAAAGGAATCATCACCAGTGCCAAACCGAAGTCAATTAGGTGCATACCCTTATGGTTTTGGTAGAGTTGGTAGCTATTTAAATGGCTATAATCAAGGATATAACCCGACCTCGGTTGGGGCATATGGATTGAGATCTGATGATAGGTTTAGTCCTGTTACAGTTGGTCGGGGTGGACTTTCTCCGATCAGTCCTGGTTATGGAATCGGGCTAAATCTCGATACAGGGTTGAACCCGAACTATGGGACAGGTCTCAATGTTGGCTCTAACCTTAGCTATGGACGAGTAATGAGCCCTTCATATGGTGGAAATTTGAATAGGTATGGTAGCCCGAACCCCATGGTGTATGGTGGTGGCAATGGAGGTAATGGTTCGATTTTAAGCTCGTCGGTTCAGAATCTGTGGGGAAACGTCGGGAACTCTGTTGGTACAAACTCGTCACACTTGAGGACTTTTCCTGGCTCTGGTGGTGTGCATACAGGAACTAATTCGTTGAACGGTATCGGAGGGCTTTGGGGTGCTTCTGCAAGCCTAGTTCATGGGGAACATTCTGGTTCTCCATTCAATGCTGTTAATCTTGACTTTGCGAGCGGCGATGGCAGCTTAACGTCGGGAACGACTGTAGGTTATGCTAGAAGCGTTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATATATGATGAGGTTCATGGGAACAATGATGAAGGAAACTCATTTTATGGGCATTCCAGTTGGCAGTTGTTACCGACCGAGCTCGAGGATTCTTCGTCGGTTGGTTTCGGGCTTGGGAATGCAGCTTCGGATGTTATTAGTAGAAACAATGGTGGTTATACTGTCGGATATGGTGTTTCTAATAGACAATCTAATAGAGGAATTGCTGCTTAG

Protein sequence

MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARVVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDFKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGNGGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVHGEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEGNSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA
Homology
[Close]
BLAST of Carg25112 vs. NCBI nr
Match: XP_022927353.1 (heterogeneous nuclear ribonucleoprotein 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 948.3 bits (2450), Expect = 2.5e-272
Identity = 478/478 (100.00%), Postives = 478/478 (100.00%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR
Sbjct: 33  MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 92

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 93  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 152

Query: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 153 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 212

Query: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240
           PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL
Sbjct: 213 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 272

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300
           SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN
Sbjct: 273 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 332

Query: 301 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 360
           GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH
Sbjct: 333 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 392

Query: 361 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 393 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 452

Query: 421 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 479
           NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA
Sbjct: 453 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 510

[Close]
BLAST of Carg25112 vs. NCBI nr
Match: XP_022927354.1 (heterogeneous nuclear ribonucleoprotein 1-like isoform X2 [Cucurbita moschata] >KAG7019379.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 948.3 bits (2450), Expect = 2.5e-272
Identity = 478/478 (100.00%), Postives = 478/478 (100.00%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240
           PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL
Sbjct: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300
           SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN
Sbjct: 241 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300

Query: 301 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 360
           GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH
Sbjct: 301 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 360

Query: 361 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 479
           NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 478

[Close]
BLAST of Carg25112 vs. NCBI nr
Match: XP_023520384.1 (heterogeneous nuclear ribonucleoprotein 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 946.8 bits (2446), Expect = 7.1e-272
Identity = 477/478 (99.79%), Postives = 478/478 (100.00%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR
Sbjct: 33  MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 92

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 93  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 152

Query: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 153 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 212

Query: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240
           PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL
Sbjct: 213 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 272

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300
           SPISPGYGIGLNL+TGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN
Sbjct: 273 SPISPGYGIGLNLETGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 332

Query: 301 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 360
           GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH
Sbjct: 333 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 392

Query: 361 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 393 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 452

Query: 421 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 479
           NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA
Sbjct: 453 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 510

[Close]
BLAST of Carg25112 vs. NCBI nr
Match: XP_023520385.1 (heterogeneous nuclear ribonucleoprotein 1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 946.8 bits (2446), Expect = 7.1e-272
Identity = 477/478 (99.79%), Postives = 478/478 (100.00%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240
           PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL
Sbjct: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300
           SPISPGYGIGLNL+TGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN
Sbjct: 241 SPISPGYGIGLNLETGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300

Query: 301 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 360
           GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH
Sbjct: 301 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 360

Query: 361 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 479
           NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 478

[Close]
BLAST of Carg25112 vs. NCBI nr
Match: XP_023001332.1 (heterogeneous nuclear ribonucleoprotein 1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 944.1 bits (2439), Expect = 4.6e-271
Identity = 475/478 (99.37%), Postives = 477/478 (99.79%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQN+LSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240
           PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL
Sbjct: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300
           SPISPGYGIGLNL+TGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN
Sbjct: 241 SPISPGYGIGLNLETGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300

Query: 301 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 360
           GGN SILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH
Sbjct: 301 GGNSSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 360

Query: 361 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 479
           NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 478

[Close]
BLAST of Carg25112 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.1e-61
Identity = 167/425 (39.29%), Postives = 226/425 (53.18%), Query Frame = 0 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLF+GGISW+TDED+LRE+F ++GEV + ++MRD+ TGR RGFGFV+F+DP V  RV
Sbjct: 4   DQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNVLSR----NNTGILGSPGPTRTKKIFVGGLASTVTE 121
           + EKH ID R V+ K+A+ R++Q V  R    N +   G     +TKKIFVGGL  T+T+
Sbjct: 64  LQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTD 123

Query: 122 SDFKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVK 181
            +F+ YF+ +G +TDV +MYD  T RPRGFGF++++SE++V+ VL+KTFH+L+GK VEVK
Sbjct: 124 EEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVK 183

Query: 182 RAVPKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRF-SPVTVG 241
           RA+PK+++P       G    G G  G Y     QGY        G    +RF    +VG
Sbjct: 184 RALPKDANPGG-----GGRSMGGGGSGGY-----QGYGGNESSYDGRMDSNRFLQHQSVG 243

Query: 242 RGGLSPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVY 301
            G  S  S GYG G          YG G N     +YG      Y G+   YG+     Y
Sbjct: 244 NGLPSYGSSGYGAG----------YGNGSNGAGYGAYG-----GYTGSAGGYGAGATAGY 303

Query: 302 GGGN---GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTG------------ 361
           G  N    G GS    + +N W    +S   N  +     GSG  H+G            
Sbjct: 304 GATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGY-----GSGAAHSGYGVPGAAPPTQS 363

Query: 362 ----TNSLNGIGGLWG--------ASASLVHGEHSG----SPFNAVNLDFASGDGSLTSG 391
               +N   G GG  G        A+  +V G  SG    +P +   +    GDGS  S 
Sbjct: 364 PSGYSNQGYGYGGYSGSDSGYGNQAAYGVVGGRPSGGGSNNPGSGGYMGGGYGDGSWRSD 398

[Close]
BLAST of Carg25112 vs. ExPASy Swiss-Prot
Match: Q96DH6 (RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.5e-46
Identity = 128/325 (39.38%), Postives = 174/325 (53.54%), Query Frame = 0 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           DPGK+FIGG+SW T  D LR+YF  FGE+ E M+MRD TT R+RGFGFV FADP    +V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 62  VLE-KHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 121
           + +  H +D +T++ K A PR  Q  +             TRTKKIFVGGL++     D 
Sbjct: 79  LGQPHHELDSKTIDPKVAFPRRAQPKM------------VTRTKKIFVGGLSANTVVEDV 138

Query: 122 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 181
           K YF+QFG + D ++M+D  T R RGFGF+T+E+E+ VEKV    FHE+N KMVE K+A 
Sbjct: 139 KQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 198

Query: 182 PKE-SSPVPNRSQLGAYPY-------GFGRVG--SYLNGYNQGYNPTSVGAYGLRSDDRF 241
           PKE   P   R +    PY       G G +G  +++  Y +GY P    +YG +    F
Sbjct: 199 PKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGY-PGFAPSYGYQFPG-F 258

Query: 242 SPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGLNVGSNLS--YGRVMSPSYGGNLNRY 301
                G    + ++   G G N      P    G N    ++  YG     S  GN    
Sbjct: 259 PAAAYGPVAAAAVAAARGSGSN---PARPGGFPGANSPGPVADLYGPASQDSGVGNYISA 318

Query: 302 GSPNPMVYGGGNGGNGSILSSSVQN 314
            SP P   G G+G  G +++++  N
Sbjct: 319 ASPQP-GSGFGHGIAGPLIATAFTN 325

[Close]
BLAST of Carg25112 vs. ExPASy Swiss-Prot
Match: Q96EP5 (DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.7e-46
Identity = 104/254 (40.94%), Postives = 147/254 (57.87%), Query Frame = 0 

Query: 4   GKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARVVL 63
           GKLF+GG+ W T ++ LR YF  +GEVV+ +IM+D+TT ++RGFGFV F DP     V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 64  EK-HVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTK--KIFVGGLASTVTESDF 123
            + H +DGR ++ K   PR  Q   +R   G    P    +K  KIFVGG+     E++ 
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 129

Query: 124 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 183
           + YF +FG +T+VV++YD   QRPRGFGFIT+E E+SV++ +   FH++ GK VEVKRA 
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189

Query: 184 PKES-SPVPNRSQLGAYPYGFGRVGSYLNG--------YNQGYNPTSVGAYGLRSDDRFS 243
           P++S S  P   Q GA  +G   V +  NG        + QGY P  +     ++   + 
Sbjct: 190 PRDSKSQAP--GQPGASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYG 249

Query: 244 PVTVGRGGLSPISP 246
           P   GRG   P  P
Sbjct: 250 PPPAGRGAPPPPPP 261

[Close]
BLAST of Carg25112 vs. ExPASy Swiss-Prot
Match: Q920Q6 (RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.7e-46
Identity = 135/352 (38.35%), Postives = 181/352 (51.42%), Query Frame = 0 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           DPGK+FIGG+SW T  D LR+YF  FGE+ E M+MRD TT R+RGFGFV FADP    +V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 62  VLE-KHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 121
           + +  H +D +T++ K A PR  Q  +             TRTKKIFVGGL++     D 
Sbjct: 79  LGQPHHELDSKTIDPKVAFPRRAQPKM------------VTRTKKIFVGGLSANTVVEDV 138

Query: 122 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 181
           K YF+QFG + D ++M+D  T R RGFGF+T+E+E+ VEKV    FHE+N KMVE K+A 
Sbjct: 139 KQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 198

Query: 182 PKE-SSPVPNRSQLGAYPY-------GFGRVG--SYLNGYNQGYNPTSVGAYGLRSDDRF 241
           PKE   P   R +    PY       G G +G  +++  Y +GY P    +YG +    F
Sbjct: 199 PKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGY-PGFAPSYGYQFPG-F 258

Query: 242 SPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGLN-VGSNLSYGRVMSPSYGGNLNRYG 301
                G    + ++   G  LN      PN+G   +  GSN        P+  G      
Sbjct: 259 PAAAYGPVAAAAVAAARGSVLN-SYSAQPNFGAPASPAGSN--------PARPGGFPGAN 318

Query: 302 SPNPM--VYGGGNGGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVH 340
           SP P+  +YG  +  +G             VGN +   S      PGSG  H
Sbjct: 319 SPGPVADLYGPASQDSG-------------VGNYISAASPQ----PGSGFGH 330

[Close]
BLAST of Carg25112 vs. ExPASy Swiss-Prot
Match: Q9JII5 (DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2)

HSP 1 Score: 185.3 bits (469), Expect = 1.7e-45
Identity = 102/254 (40.16%), Postives = 147/254 (57.87%), Query Frame = 0 

Query: 4   GKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARVVL 63
           GKLF+GG+ W T ++ LR YF  +GEVV+ +IM+D+TT ++RGFGFV F DP     V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 64  EK-HVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSP--GPTRTKKIFVGGLASTVTESDF 123
            + H +DGR ++ K   PR  Q   +R   G    P    +++ KIFVGG+     E++ 
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETEL 129

Query: 124 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 183
           + YF +FG +T+VV++YD   QRPRGFGFIT+E E+SV++ +   FH++ GK VEVKRA 
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189

Query: 184 PKES-SPVPNRSQLGAYPYGFGRVGSYLNG--------YNQGYNPTSVGAYGLRSDDRFS 243
           P++S +  P   Q GA  +G     S  NG        + QGY P  +     ++   + 
Sbjct: 190 PRDSKNQAP--GQPGASQWGSRVAPSAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYG 249

Query: 244 PVTVGRGGLSPISP 246
           P   GRG   P  P
Sbjct: 250 PPPAGRGAPPPPPP 261

[Close]
BLAST of Carg25112 vs. ExPASy TrEMBL
Match: A0A6J1EKS0 (heterogeneous nuclear ribonucleoprotein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434205 PE=4 SV=1)

HSP 1 Score: 948.3 bits (2450), Expect = 1.2e-272
Identity = 478/478 (100.00%), Postives = 478/478 (100.00%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR
Sbjct: 33  MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 92

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 93  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 152

Query: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 153 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 212

Query: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240
           PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL
Sbjct: 213 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 272

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300
           SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN
Sbjct: 273 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 332

Query: 301 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 360
           GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH
Sbjct: 333 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 392

Query: 361 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 393 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 452

Query: 421 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 479
           NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA
Sbjct: 453 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 510

[Close]
BLAST of Carg25112 vs. ExPASy TrEMBL
Match: A0A6J1EHS3 (heterogeneous nuclear ribonucleoprotein 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434205 PE=4 SV=1)

HSP 1 Score: 948.3 bits (2450), Expect = 1.2e-272
Identity = 478/478 (100.00%), Postives = 478/478 (100.00%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240
           PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL
Sbjct: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300
           SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN
Sbjct: 241 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300

Query: 301 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 360
           GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH
Sbjct: 301 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 360

Query: 361 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 479
           NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 478

[Close]
BLAST of Carg25112 vs. ExPASy TrEMBL
Match: A0A6J1KG87 (heterogeneous nuclear ribonucleoprotein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495494 PE=4 SV=1)

HSP 1 Score: 944.1 bits (2439), Expect = 2.2e-271
Identity = 475/478 (99.37%), Postives = 477/478 (99.79%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQN+LSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240
           PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL
Sbjct: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300
           SPISPGYGIGLNL+TGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN
Sbjct: 241 SPISPGYGIGLNLETGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300

Query: 301 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 360
           GGN SILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH
Sbjct: 301 GGNSSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 360

Query: 361 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 479
           NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 478

[Close]
BLAST of Carg25112 vs. ExPASy TrEMBL
Match: A0A6J1KIB5 (heterogeneous nuclear ribonucleoprotein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495494 PE=4 SV=1)

HSP 1 Score: 944.1 bits (2439), Expect = 2.2e-271
Identity = 475/478 (99.37%), Postives = 477/478 (99.79%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR
Sbjct: 33  MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 92

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQN+LSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 93  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 152

Query: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 153 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 212

Query: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240
           PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL
Sbjct: 213 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 272

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300
           SPISPGYGIGLNL+TGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN
Sbjct: 273 SPISPGYGIGLNLETGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 332

Query: 301 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 360
           GGN SILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH
Sbjct: 333 GGNSSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 392

Query: 361 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 393 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 452

Query: 421 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 479
           NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA
Sbjct: 453 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 510

[Close]
BLAST of Carg25112 vs. ExPASy TrEMBL
Match: A0A6J1CL94 (heterogeneous nuclear ribonucleoprotein 1 OS=Momordica charantia OX=3673 GN=LOC111012638 PE=4 SV=1)

HSP 1 Score: 887.1 bits (2291), Expect = 3.3e-254
Identity = 443/478 (92.68%), Postives = 457/478 (95.61%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPV+AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQN+LSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K YFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240
           PKESSPVPNR+QLG YPYGFGRVGSYLNGYNQGYNP SVG YGLRSD RFSP++VGRGGL
Sbjct: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300
           SPISPGYGIGLNLDTGL+PNYG G N  SNLSYGRVMSPSYG NLNRYGSPNPM+YGGG+
Sbjct: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300

Query: 301 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 360
           GGNGSILSSSVQNLWGNVGNS G NSSHLRTFPGSGGVHTGTNSLN IGGLWGASASL H
Sbjct: 301 GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360

Query: 361 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GE++GSPFN  NLDF +GD S TSGTTVGYARS+GTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 479
           NSFYGHSSWQ LPTELEDSSS+GFGLGNAASDVISRN+ GYTVGYGVSNRQSNRGIAA
Sbjct: 421 NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA 478

[Close]
BLAST of Carg25112 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 453.4 bits (1165), Expect = 2.3e-127
Identity = 273/495 (55.15%), Postives = 329/495 (66.46%), Query Frame = 0 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLFIGGISWDT+E+RL+EYF SFGEV+E +I++DRTTGRARGFGFVVFADP VA  V
Sbjct: 4   DNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNVLSR-NNTGILGSP-GPTRTKKIFVGGLASTVTESD 121
           + EKH IDGR VEAKKAVPRDDQN+++R N++ I GSP GP RT+KIFVGGL S+VTESD
Sbjct: 64  ITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESD 123

Query: 122 FKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRA 181
           FKTYF+QFGT TDVVVMYDHNTQRPRGFGFITY+SEE+VEKVL KTFHELNGKMVEVKRA
Sbjct: 124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRA 183

Query: 182 VPKESSPVPNRSQLGA-YPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRG 241
           VPKE SP P+RS LGA Y YG  RV + LNGY QG+NP +VG YGLR D RFSPV  GR 
Sbjct: 184 VPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGAGRS 243

Query: 242 GLSPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGG 301
           G +  S GYG+ +N D GL   +  G N   N+ YGR MSP Y GN NR+G P     GG
Sbjct: 244 GFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFG-PAVGYEGG 303

Query: 302 GNGGNGSILSSSVQNLWGNVGN-SVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASAS 361
             GGN S  SS  +NLWGN G  +   N+++  +    GG  +G N+L+G  G  G +  
Sbjct: 304 NGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSGVNWG 363

Query: 362 LVHGEHSGSPFNAVNLDF-ASGDGSLTSGTTVGYARSVGTN----VSSASLYSAPNI--Y 421
              G ++      V   +  +G+     GT    AR+ G N     SS S  SA N   Y
Sbjct: 364 APGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSASATNNTGY 423

Query: 422 D-----EVHGNNDEGNSFYGHSSWQLLPTELEDSSSVGFGLGNA--ASDVISRNNG-GYT 478
           D     E +GN     + Y   +W+    E E  +   +G+G    +SDV +R++  GY 
Sbjct: 424 DTAGLAEFYGN----GAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSPGYV 483

[Close]
BLAST of Carg25112 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 449.9 bits (1156), Expect = 2.6e-126
Identity = 271/493 (54.97%), Postives = 327/493 (66.33%), Query Frame = 0 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLFIGGISWDT+E+RL+EYF SFGEV+E +I++DRTTGRARGFGFVVFADP VA  V
Sbjct: 4   DNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNVLSR-NNTGILGSP-GPTRTKKIFVGGLASTVTESD 121
           + EKH IDGR VEAKKAVPRDDQN+++R N++ I GSP GP RT+KIFVGGL S+VTESD
Sbjct: 64  ITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESD 123

Query: 122 FKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRA 181
           FKTYF+QFGT TDVVVMYDHNTQRPRGFGFITY+SEE+VEKVL KTFHELNGKMVEVKRA
Sbjct: 124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRA 183

Query: 182 VPKESSPVPNRSQLGA-YPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRG 241
           VPKE SP P+RS LGA Y YG  RV + LNGY QG+NP +VG YGLR D RFSPV  GR 
Sbjct: 184 VPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGAGRS 243

Query: 242 GLSPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGG 301
           G +  S GYG+ +N D GL   +  G N   N+ YGR MSP Y GN NR+G P     GG
Sbjct: 244 GFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFG-PAVGYEGG 303

Query: 302 GNGGNGSILSSSVQNLWGNVGN-SVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASAS 361
             GGN S  SS  +NLWGN G  +   N+++  +    GG  +G N+L+G  G  G +  
Sbjct: 304 NGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSGVNWG 363

Query: 362 LVHGEHSGSPFNAVNLDF-ASGDGSLTSGTTVGYARSVGTN----VSSASLYSAPNI--Y 421
              G ++      V   +  +G+     GT    AR+ G N     SS S  SA N   Y
Sbjct: 364 APGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSASATNNTGY 423

Query: 422 D-----EVHGNNDEGNSFYGHSSWQLLPTELEDSSSVGFGLGNA--ASDVISRNNG-GYT 476
           D     E +GN     + Y   +W+    E E  +   +G+G    +SDV +R++  GY 
Sbjct: 424 DTAGLAEFYGN----GAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSPGYV 483

[Close]
BLAST of Carg25112 vs. TAIR 10
Match: AT5G47620.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 397.9 bits (1021), Expect = 1.2e-110
Identity = 242/483 (50.10%), Postives = 302/483 (62.53%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+  KLFIGGISW+T EDRLR+YF SFGEV+E +IM+DR TGRARGFGFVVFADP VA R
Sbjct: 3   MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVL KH+IDG+ VEAKKAVPRDD  V +++N+ + GSPGP+ +KKIFVGGLAS+VTE++F
Sbjct: 63  VVLLKHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEF 122

Query: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K YF QFG ITDVVVMYDH TQRPRGFGFI+Y+SEE+V+KVL KTFHELNGKMVEVK AV
Sbjct: 123 KKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAV 182

Query: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240
           PK+ +    R+Q+    +G  R+ S LN Y QG++P+ +  YG++ + R+SP    RGG 
Sbjct: 183 PKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPISGYGVKPEVRYSPAVGNRGGF 242

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300
           SP   GYGI LN +     NYG+G + G    +GR  SP Y  +L R+GS   M  GG +
Sbjct: 243 SPFGHGYGIELNFEPNQTQNYGSGSSGG----FGRPFSPGYAASLGRFGS--QMESGGAS 302

Query: 301 GGNGSILSSSVQN-LWGNVGNSVGTNSSHLR-TFPGSGGVHTGTNSLNGIGGLWGASA-- 360
            GNGS+L+++ +N LWGN G    +NS   R +F G+ G+    +SL  IG  WG  A  
Sbjct: 303 VGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGNSGM----SSLGSIGDNWGTVARA 362

Query: 361 -SLVHGEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHG 420
            S  HGE  G    A+             G  VG     G +  S+ L            
Sbjct: 363 RSSYHGERGGVGLEAMR------------GVHVG-----GYSSGSSIL------------ 422

Query: 421 NNDEGNSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRG 479
              E +S Y  S W  LP + E+      GLG    D +SR   GY       NRQ N G
Sbjct: 423 ---EADSLYSDSMWLSLPAKAEE------GLGMGPLDFMSRGPAGYI------NRQPNGG 431

[Close]
BLAST of Carg25112 vs. TAIR 10
Match: AT5G47620.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 397.9 bits (1021), Expect = 1.2e-110
Identity = 242/483 (50.10%), Postives = 302/483 (62.53%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+  KLFIGGISW+T EDRLR+YF SFGEV+E +IM+DR TGRARGFGFVVFADP VA R
Sbjct: 3   MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVL KH+IDG+ VEAKKAVPRDD  V +++N+ + GSPGP+ +KKIFVGGLAS+VTE++F
Sbjct: 63  VVLLKHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEF 122

Query: 121 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K YF QFG ITDVVVMYDH TQRPRGFGFI+Y+SEE+V+KVL KTFHELNGKMVEVK AV
Sbjct: 123 KKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAV 182

Query: 181 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 240
           PK+ +    R+Q+    +G  R+ S LN Y QG++P+ +  YG++ + R+SP    RGG 
Sbjct: 183 PKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPISGYGVKPEVRYSPAVGNRGGF 242

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 300
           SP   GYGI LN +     NYG+G + G    +GR  SP Y  +L R+GS   M  GG +
Sbjct: 243 SPFGHGYGIELNFEPNQTQNYGSGSSGG----FGRPFSPGYAASLGRFGS--QMESGGAS 302

Query: 301 GGNGSILSSSVQN-LWGNVGNSVGTNSSHLR-TFPGSGGVHTGTNSLNGIGGLWGASA-- 360
            GNGS+L+++ +N LWGN G    +NS   R +F G+ G+    +SL  IG  WG  A  
Sbjct: 303 VGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGNSGM----SSLGSIGDNWGTVARA 362

Query: 361 -SLVHGEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHG 420
            S  HGE  G    A+             G  VG     G +  S+ L            
Sbjct: 363 RSSYHGERGGVGLEAMR------------GVHVG-----GYSSGSSIL------------ 422

Query: 421 NNDEGNSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRG 479
              E +S Y  S W  LP + E+      GLG    D +SR   GY       NRQ N G
Sbjct: 423 ---EADSLYSDSMWLSLPAKAEE------GLGMGPLDFMSRGPAGYI------NRQPNGG 431

[Close]
BLAST of Carg25112 vs. TAIR 10
Match: AT5G47620.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 385.6 bits (989), Expect = 5.9e-107
Identity = 242/505 (47.92%), Postives = 302/505 (59.80%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+  KLFIGGISW+T EDRLR+YF SFGEV+E +IM+DR TGRARGFGFVVFADP VA R
Sbjct: 3   MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62

Query: 61  VVLEKHVIDGR----------------------TVEAKKAVPRDDQNVLSRNNTGILGSP 120
           VVL KH+IDG+                       VEAKKAVPRDD  V +++N+ + GSP
Sbjct: 63  VVLLKHIIDGKILVDSIVYNQLCRSDKCISLSEVVEAKKAVPRDDHVVFNKSNSSLQGSP 122

Query: 121 GPTRTKKIFVGGLASTVTESDFKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESV 180
           GP+ +KKIFVGGLAS+VTE++FK YF QFG ITDVVVMYDH TQRPRGFGFI+Y+SEE+V
Sbjct: 123 GPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAV 182

Query: 181 EKVLYKTFHELNGKMVEVKRAVPKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTS 240
           +KVL KTFHELNGKMVEVK AVPK+ +    R+Q+    +G  R+ S LN Y QG++P+ 
Sbjct: 183 DKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSP 242

Query: 241 VGAYGLRSDDRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMS 300
           +  YG++ + R+SP    RGG SP   GYGI LN +     NYG+G + G    +GR  S
Sbjct: 243 ISGYGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSGSSGG----FGRPFS 302

Query: 301 PSYGGNLNRYGSPNPMVYGGGNGGNGSILSSSVQN-LWGNVGNSVGTNSSHLR-TFPGSG 360
           P Y  +L R+GS   M  GG + GNGS+L+++ +N LWGN G    +NS   R +F G+ 
Sbjct: 303 PGYAASLGRFGS--QMESGGASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGNS 362

Query: 361 GVHTGTNSLNGIGGLWGASA---SLVHGEHSGSPFNAVNLDFASGDGSLTSGTTVGYARS 420
           G+    +SL  IG  WG  A   S  HGE  G    A+             G  VG    
Sbjct: 363 GM----SSLGSIGDNWGTVARARSSYHGERGGVGLEAMR------------GVHVG---- 422

Query: 421 VGTNVSSASLYSAPNIYDEVHGNNDEGNSFYGHSSWQLLPTELEDSSSVGFGLGNAASDV 479
            G +  S+ L               E +S Y  S W  LP + E+      GLG    D 
Sbjct: 423 -GYSSGSSIL---------------EADSLYSDSMWLSLPAKAEE------GLGMGPLDF 453

The following BLAST results are available for this feature:
BLAST of Carg25112 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022927353.12.5e-272100.00heterogeneous nuclear ribonucleoprotein 1-like isoform X1 [Cucurbita moschata][more]
XP_022927354.12.5e-272100.00heterogeneous nuclear ribonucleoprotein 1-like isoform X2 [Cucurbita moschata] >... [more]
XP_023520384.17.1e-27299.79heterogeneous nuclear ribonucleoprotein 1 isoform X1 [Cucurbita pepo subsp. pepo... [more]
XP_023520385.17.1e-27299.79heterogeneous nuclear ribonucleoprotein 1 isoform X2 [Cucurbita pepo subsp. pepo... [more]
XP_023001332.14.6e-27199.37heterogeneous nuclear ribonucleoprotein 1 isoform X2 [Cucurbita maxima][more]
BLAST of Carg25112 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8W0342.1e-6139.29Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP... [more]
Q96DH61.5e-4639.38RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1[more]
Q96EP55.7e-4640.94DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1[more]
Q920Q69.7e-4638.35RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1[more]
Q9JII51.7e-4540.16DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2[more]
BLAST of Carg25112 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EKS01.2e-272100.00heterogeneous nuclear ribonucleoprotein 1-like isoform X1 OS=Cucurbita moschata ... [more]
A0A6J1EHS31.2e-272100.00heterogeneous nuclear ribonucleoprotein 1-like isoform X2 OS=Cucurbita moschata ... [more]
A0A6J1KG872.2e-27199.37heterogeneous nuclear ribonucleoprotein 1 isoform X2 OS=Cucurbita maxima OX=3661... [more]
A0A6J1KIB52.2e-27199.37heterogeneous nuclear ribonucleoprotein 1 isoform X1 OS=Cucurbita maxima OX=3661... [more]
A0A6J1CL943.3e-25492.68heterogeneous nuclear ribonucleoprotein 1 OS=Momordica charantia OX=3673 GN=LOC1... [more]
BLAST of Carg25112 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G07810.12.3e-12755.15RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT3G07810.22.6e-12654.97RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G47620.11.2e-11050.10RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G47620.21.2e-11050.10RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G47620.45.9e-10747.92RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 5..76
e-value: 1.2E-22
score: 91.2
coord: 105..177
e-value: 3.7E-24
score: 96.2
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 106..164
e-value: 2.2E-16
score: 59.5
coord: 6..71
e-value: 3.0E-15
score: 55.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 104..181
score: 17.830454
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 4..80
score: 17.847509
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 101..190
e-value: 7.0E-27
score: 95.5
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 3..86
e-value: 1.3E-26
score: 94.7
NoneNo IPR availablePANTHERPTHR48032:SF1HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1-LIKEcoord: 1..478
NoneNo IPR availablePANTHERPTHR48032RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6coord: 1..478
NoneNo IPR availableCDDcd12325RRM1_hnRNPA_hnRNPD_likecoord: 6..76
e-value: 5.17124E-36
score: 125.776
IPR034131DAZ-associated protein 1, RNA recognition motif 2CDDcd12327RRM2_DAZAP1coord: 102..181
e-value: 1.58322E-48
score: 159.453
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 100..203
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 3..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25112-RACarg25112-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding