Carg25050 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg25050
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionalcohol dehydrogenase-like
LocationCarg_Chr01: 8144050 .. 8144700 (-)
RNA-Seq ExpressionCarg25050
SyntenyCarg25050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAGTACCGCCGGTCAAGTCATCACATGCAAAGGTTCGAACCCCATTTTCAATTCTTCCAACTTCTTTAATGATTTGATTTCAAGCTATGCTAATTACTTGGTGCAGCTGCTGTGGCATGGGAAGCCGGAAAGCCACTGGTGATCGAGGAAGTGGAAGTGGCACCTCCTCAAGCTAATGAAGTCCGTGTCAACATTCTCTTTACTGCCCTCTGCCACACTGATGTCTACTTCTGGGAGGCCAAGGTAAGCAATTTCAAACATGTTTTGTTTATCAGGGGTGGGGCGTTGCTGTGCTTGTTGGGGTTCCAAACAAAGATGATTCCTTCAAAACGCATCCAATGAATTTGTTGAATGAGAAGACTCTGAAGGGTACGTTCTTCGGGAACTACAAGACCCGTTCCGACATTCCAAATGTGGTGGAGCAGTACTTGAAGAAGGTTAGATATCAATCACGTCCTTCGTTCATATATATATATATATTCACATTTCATTGATTAATAGCTTCGAATATATATTAATATCTTGGCAGGAGTTGGAATTGGAGAAGTTCATTACTCACTCTGTCCCCTTCTCTGAGATTAACAAGGCATTCGACTACATGCTACAAGGACAGTCGATTCGGTGCGTCATTCGAATGGAGCATTGA

mRNA sequence

ATGTCAAGTACCGCCGGTCAAGTCATCACATGCAAAGCTGCTGTGGCATGGGAAGCCGGAAAGCCACTGGTGATCGAGGAAGTGGAAGTGGCACCTCCTCAAGCTAATGAAGTCCGTGTCAACATTCTCTTTACTGCCCTCTGCCACACTGATGTCTACTTCTGGGAGGCCAAGGGGTGGGGCGTTGCTGTGCTTGTTGGGGTTCCAAACAAAGATGATTCCTTCAAAACGCATCCAATGAATTTGTTGAATGAGAAGACTCTGAAGGGTACGTTCTTCGGGAACTACAAGACCCGTTCCGACATTCCAAATGTGGTGGAGCAGTACTTGAAGAAGGAGTTGGAATTGGAGAAGTTCATTACTCACTCTGTCCCCTTCTCTGAGATTAACAAGGCATTCGACTACATGCTACAAGGACAGTCGATTCGGTGCGTCATTCGAATGGAGCATTGA

Coding sequence (CDS)

ATGTCAAGTACCGCCGGTCAAGTCATCACATGCAAAGCTGCTGTGGCATGGGAAGCCGGAAAGCCACTGGTGATCGAGGAAGTGGAAGTGGCACCTCCTCAAGCTAATGAAGTCCGTGTCAACATTCTCTTTACTGCCCTCTGCCACACTGATGTCTACTTCTGGGAGGCCAAGGGGTGGGGCGTTGCTGTGCTTGTTGGGGTTCCAAACAAAGATGATTCCTTCAAAACGCATCCAATGAATTTGTTGAATGAGAAGACTCTGAAGGGTACGTTCTTCGGGAACTACAAGACCCGTTCCGACATTCCAAATGTGGTGGAGCAGTACTTGAAGAAGGAGTTGGAATTGGAGAAGTTCATTACTCACTCTGTCCCCTTCTCTGAGATTAACAAGGCATTCGACTACATGCTACAAGGACAGTCGATTCGGTGCGTCATTCGAATGGAGCATTGA

Protein sequence

MSSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAKGWGVAVLVGVPNKDDSFKTHPMNLLNEKTLKGTFFGNYKTRSDIPNVVEQYLKKELELEKFITHSVPFSEINKAFDYMLQGQSIRCVIRMEH
Homology
[Close]
BLAST of Carg25050 vs. NCBI nr
Match: KAG7037264.1 (Alcohol dehydrogenase 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.5 bits (794), Expect = 8.1e-81
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0 

Query: 1   MSSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAKGW 60
           MSSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAKGW
Sbjct: 1   MSSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAKGW 60

Query: 61  GVAVLVGVPNKDDSFKTHPMNLLNEKTLKGTFFGNYKTRSDIPNVVEQYLKKELELEKFI 120
           GVAVLVGVPNKDDSFKTHPMNLLNEKTLKGTFFGNYKTRSDIPNVVEQYLKKELELEKFI
Sbjct: 61  GVAVLVGVPNKDDSFKTHPMNLLNEKTLKGTFFGNYKTRSDIPNVVEQYLKKELELEKFI 120

Query: 121 THSVPFSEINKAFDYMLQGQSIRCVIRMEH 151
           THSVPFSEINKAFDYMLQGQSIRCVIRMEH
Sbjct: 121 THSVPFSEINKAFDYMLQGQSIRCVIRMEH 150

[Close]
BLAST of Carg25050 vs. NCBI nr
Match: GEU53546.1 (alcohol dehydrogenase 2-like [Tanacetum cinerariifolium])

HSP 1 Score: 236.1 bits (601), Expect = 2.0e-58
Identity = 124/199 (62.31%), Postives = 134/199 (67.34%), Query Frame = 0 

Query: 1   MSSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK-- 60
           MSST GQVI CKAAVAWEAGKPLVIEEVEVAPPQ  EVRV IL TALCHTDVYFWEAK  
Sbjct: 1   MSSTVGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRVKILVTALCHTDVYFWEAKKF 60

Query: 61  -------------------------------------------------GWGVAVLVGVP 120
                                                            GWGVAVLVGVP
Sbjct: 61  GVTEFVNPKDYEKPVQEVIAEMTNGGVDRSIECTGHIDAMISAFECVHDGWGVAVLVGVP 120

Query: 121 NKDDSFKTHPMNLLNEKTLKGTFFGNYKTRSDIPNVVEQYLKKELELEKFITHSVPFSEI 149
           +KD  FKT P+NLLNE+TLKGTFFGNYK RSDIP+VVE+Y+ KELELEKFITH VPFSEI
Sbjct: 121 HKDAVFKTSPLNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHEVPFSEI 180

[Close]
BLAST of Carg25050 vs. NCBI nr
Match: KAF2299091.1 (hypothetical protein GH714_030540 [Hevea brasiliensis])

HSP 1 Score: 221.9 bits (564), Expect = 3.8e-54
Identity = 128/278 (46.04%), Postives = 143/278 (51.44%), Query Frame = 0 

Query: 1   MSSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK-- 60
           M+STAG+VI CKAAVAWEAGKPLVIEEVEVAPPQANEVRV ILFT+LCHTDVYFWEAK  
Sbjct: 1   MASTAGKVIRCKAAVAWEAGKPLVIEEVEVAPPQANEVRVKILFTSLCHTDVYFWEAKGQ 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  NPLFPRIYGHEAGGIVESVGECVTDLKPGDHVLPVFTGECKECAHCFGATVNVAKPPKGS 120

Query: 121 ------------------------------------------------------------ 150
                                                                       
Sbjct: 121 SVAVFGLGAVGLAVTKKFGVNEFVNPKDHKKPVQEVIAEMTDGGVDRSVECTGNIDAMIS 180

[Close]
BLAST of Carg25050 vs. NCBI nr
Match: XP_023521665.1 (alcohol dehydrogenase 1-like [Cucurbita pepo subsp. pepo] >XP_023523965.1 alcohol dehydrogenase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.8 bits (543), Expect = 1.0e-51
Identity = 147/380 (38.68%), Postives = 149/380 (39.21%), Query Frame = 0 

Query: 1   MSSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK-- 60
           MSSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQA+EVRVNILFTALCHTDVYFWEAK  
Sbjct: 1   MSSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQADEVRVNILFTALCHTDVYFWEAKGQ 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  TPLFPRIFGHEAGGVVESVGEGVKYLKPGDHVLPVFTGECGECRHCKSEESNMCDLLRIN 120

Query: 121 ------------------------------------------------------------ 151
                                                                       
Sbjct: 121 TDRGVMLSDGNTRFSKNGQPIYHFVGTSTFSEYTVVHQGCLAKINPAAPLDIVCVLSCGI 180

[Close]
BLAST of Carg25050 vs. NCBI nr
Match: XP_022926240.1 (alcohol dehydrogenase 1-like [Cucurbita moschata])

HSP 1 Score: 209.9 bits (533), Expect = 1.5e-50
Identity = 146/380 (38.42%), Postives = 147/380 (38.68%), Query Frame = 0 

Query: 1   MSSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK-- 60
           MSSTAG+VI CKAAVAWEAGKPL IEEVEVAPPQANEVRV ILFTALCHTDVYFWEAK  
Sbjct: 1   MSSTAGRVIKCKAAVAWEAGKPLAIEEVEVAPPQANEVRVKILFTALCHTDVYFWEAKGQ 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  TPLFPRIFGHEAGGVVESVGEGVKYLKPGDHVLPVFTGECGECRHCKSEESNMCDLLRIN 120

Query: 121 ------------------------------------------------------------ 151
                                                                       
Sbjct: 121 TDRGVMLSDGNTRFSKNGQPIYHFVGTSTFSEYTVVHEGCLAKINPAAPLDIVCVLSCGI 180

[Close]
BLAST of Carg25050 vs. ExPASy Swiss-Prot
Match: P13603 (Alcohol dehydrogenase 1 OS=Trifolium repens OX=3899 GN=ADH1 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 8.8e-46
Identity = 128/379 (33.77%), Postives = 142/379 (37.47%), Query Frame = 0 

Query: 1   MSSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK-- 60
           MS+TAGQVI C+AAVAWEAGKPLVIEEVEVAPPQA EVR+ ILFT+LCHTDVYFWEAK  
Sbjct: 1   MSNTAGQVIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCNLLRIN 120

Query: 121 ------------------------------------------------------------ 150
                                                                       
Sbjct: 121 TDRGVMINDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGI 180

[Close]
BLAST of Carg25050 vs. ExPASy Swiss-Prot
Match: P25141 (Alcohol dehydrogenase 1 OS=Petunia hybrida OX=4102 GN=ADH1 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-45
Identity = 129/380 (33.95%), Postives = 142/380 (37.37%), Query Frame = 0 

Query: 2   SSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK--- 61
           S+TAGQVI CKAAVAWEAGKPLVIEEVEVAPPQ  EVR+ ILFT+LCHTDVYFWEAK   
Sbjct: 3   SNTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQT 62

Query: 62  ------------------------------------------------------------ 121
                                                                       
Sbjct: 63  PLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLRINT 122

Query: 122 ------------------------------------------------------------ 151
                                                                       
Sbjct: 123 DRGVMIHDGQTRFSKDGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGIS 182

[Close]
BLAST of Carg25050 vs. ExPASy Swiss-Prot
Match: P12886 (Alcohol dehydrogenase 1 OS=Pisum sativum OX=3888 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.8e-44
Identity = 124/379 (32.72%), Postives = 142/379 (37.47%), Query Frame = 0 

Query: 1   MSSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK-- 60
           MS+T GQ+I C+AAVAWEAGKPLVIEEVEVAPPQA EVR+ ILFT+LCHTDVYFWEAK  
Sbjct: 1   MSNTVGQIIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRIN 120

Query: 121 ------------------------------------------------------------ 150
                                                                       
Sbjct: 121 TDRGVMLNDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGI 180

[Close]
BLAST of Carg25050 vs. ExPASy Swiss-Prot
Match: P48977 (Alcohol dehydrogenase OS=Malus domestica OX=3750 GN=ADH PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.9e-44
Identity = 125/379 (32.98%), Postives = 141/379 (37.20%), Query Frame = 0 

Query: 1   MSSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK-- 60
           MS+TAGQVI C+AAVAWEAGKPLVIEEVEVAPPQANEVR+ ILFT+LCHTDVYFWEAK  
Sbjct: 1   MSNTAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQ 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  NPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESNMCDLLRIN 120

Query: 121 ------------------------------------------------------------ 150
                                                                       
Sbjct: 121 TDRGVMLSDGKSRFSIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPSAPLDKVCLLSCGI 180

[Close]
BLAST of Carg25050 vs. ExPASy Swiss-Prot
Match: P06525 (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana OX=3702 GN=ADH1 PE=1 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-42
Identity = 122/376 (32.45%), Postives = 137/376 (36.44%), Query Frame = 0 

Query: 3   STAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK---- 62
           ST GQ+I CKAAVAWEAGKPLVIEEVEVAPPQ +EVR+ ILFT+LCHTDVYFWEAK    
Sbjct: 2   STTGQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTP 61

Query: 63  ------------------------------------------------------------ 122
                                                                       
Sbjct: 62  LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTE 121

Query: 123 ------------------------------------------------------------ 149
                                                                       
Sbjct: 122 RGGMIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLST 181

[Close]
BLAST of Carg25050 vs. ExPASy TrEMBL
Match: A0A6L2KWB0 (Alcohol dehydrogenase 2-like OS=Tanacetum cinerariifolium OX=118510 GN=Tci_025524 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 9.5e-59
Identity = 124/199 (62.31%), Postives = 134/199 (67.34%), Query Frame = 0 

Query: 1   MSSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK-- 60
           MSST GQVI CKAAVAWEAGKPLVIEEVEVAPPQ  EVRV IL TALCHTDVYFWEAK  
Sbjct: 1   MSSTVGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRVKILVTALCHTDVYFWEAKKF 60

Query: 61  -------------------------------------------------GWGVAVLVGVP 120
                                                            GWGVAVLVGVP
Sbjct: 61  GVTEFVNPKDYEKPVQEVIAEMTNGGVDRSIECTGHIDAMISAFECVHDGWGVAVLVGVP 120

Query: 121 NKDDSFKTHPMNLLNEKTLKGTFFGNYKTRSDIPNVVEQYLKKELELEKFITHSVPFSEI 149
           +KD  FKT P+NLLNE+TLKGTFFGNYK RSDIP+VVE+Y+ KELELEKFITH VPFSEI
Sbjct: 121 HKDAVFKTSPLNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHEVPFSEI 180

[Close]
BLAST of Carg25050 vs. ExPASy TrEMBL
Match: A0A6A6LCB4 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_030540 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.8e-54
Identity = 128/278 (46.04%), Postives = 143/278 (51.44%), Query Frame = 0 

Query: 1   MSSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK-- 60
           M+STAG+VI CKAAVAWEAGKPLVIEEVEVAPPQANEVRV ILFT+LCHTDVYFWEAK  
Sbjct: 1   MASTAGKVIRCKAAVAWEAGKPLVIEEVEVAPPQANEVRVKILFTSLCHTDVYFWEAKGQ 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  NPLFPRIYGHEAGGIVESVGECVTDLKPGDHVLPVFTGECKECAHCFGATVNVAKPPKGS 120

Query: 121 ------------------------------------------------------------ 150
                                                                       
Sbjct: 121 SVAVFGLGAVGLAVTKKFGVNEFVNPKDHKKPVQEVIAEMTDGGVDRSVECTGNIDAMIS 180

[Close]
BLAST of Carg25050 vs. ExPASy TrEMBL
Match: A0A6J1EKJ8 (alcohol dehydrogenase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111433418 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 7.3e-51
Identity = 146/380 (38.42%), Postives = 147/380 (38.68%), Query Frame = 0 

Query: 1   MSSTAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK-- 60
           MSSTAG+VI CKAAVAWEAGKPL IEEVEVAPPQANEVRV ILFTALCHTDVYFWEAK  
Sbjct: 1   MSSTAGRVIKCKAAVAWEAGKPLAIEEVEVAPPQANEVRVKILFTALCHTDVYFWEAKGQ 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  TPLFPRIFGHEAGGVVESVGEGVKYLKPGDHVLPVFTGECGECRHCKSEESNMCDLLRIN 120

Query: 121 ------------------------------------------------------------ 151
                                                                       
Sbjct: 121 TDRGVMLSDGNTRFSKNGQPIYHFVGTSTFSEYTVVHEGCLAKINPAAPLDIVCVLSCGI 180

[Close]
BLAST of Carg25050 vs. ExPASy TrEMBL
Match: A0A2P5XJU4 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA17022 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.6e-48
Identity = 123/301 (40.86%), Postives = 137/301 (45.51%), Query Frame = 0 

Query: 3   STAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK---- 62
           STAGQVI CKAAVAWEAG+PLVIEEVEVAPPQA EVR+ ILFT+LCHTDVYFWEAK    
Sbjct: 5   STAGQVIRCKAAVAWEAGRPLVIEEVEVAPPQAMEVRLKILFTSLCHTDVYFWEAKGQTP 64

Query: 63  ------------------------------------------------------------ 122
                                                                       
Sbjct: 65  VFPRIFGHEAGGVVESVGEGVTELKPGDHVLPVFTGECGDCRHCKSEESNMCDLLRINTD 124

Query: 123 ------------------------------------------------------------ 150
                                                                       
Sbjct: 125 RGVMLSDGKTSCGISTGLGATLNVAKPTKGSTVAIFGLGAVGLAAAEGARIVGASRIIGV 184

[Close]
BLAST of Carg25050 vs. ExPASy TrEMBL
Match: A0A1D6L3D2 (Alcohol dehydrogenase 1 OS=Zea mays OX=4577 GN=542363 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 5.7e-48
Identity = 101/151 (66.89%), Postives = 119/151 (78.81%), Query Frame = 0 

Query: 3   STAGQVITCKAAVAWEAGKPLVIEEVEVAPPQAN-EVRVNILFTALCHTDVYFWEA--KG 62
           +TAG+VI CKAAVAWEAGKPL IEEVEV     N  V  ++  T   +  +  +E    G
Sbjct: 2   ATAGKVIKCKAAVAWEAGKPLSIEEVEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDG 61

Query: 63  WGVAVLVGVPNKDDSFKTHPMNLLNEKTLKGTFFGNYKTRSDIPNVVEQYLKKELELEKF 122
           WGVAVLVGVP+KD  FKTHPMN LNE+TLKGTFFGNYK R+D+PNVVE Y+KKELE+EKF
Sbjct: 62  WGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKF 121

Query: 123 ITHSVPFSEINKAFDYMLQGQSIRCVIRMEH 151
           ITHSVPF+EINKAFD M +G+ IRC+IRME+
Sbjct: 122 ITHSVPFAEINKAFDLMAKGEGIRCIIRMEN 152

[Close]
BLAST of Carg25050 vs. TAIR 10
Match: AT1G77120.1 (alcohol dehydrogenase 1 )

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-43
Identity = 122/376 (32.45%), Postives = 137/376 (36.44%), Query Frame = 0 

Query: 3   STAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK---- 62
           ST GQ+I CKAAVAWEAGKPLVIEEVEVAPPQ +EVR+ ILFT+LCHTDVYFWEAK    
Sbjct: 2   STTGQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTP 61

Query: 63  ------------------------------------------------------------ 122
                                                                       
Sbjct: 62  LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTE 121

Query: 123 ------------------------------------------------------------ 149
                                                                       
Sbjct: 122 RGGMIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLST 181

[Close]
BLAST of Carg25050 vs. TAIR 10
Match: AT5G24760.1 (GroES-like zinc-binding dehydrogenase family protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-20
Identity = 40/90 (44.44%), Postives = 63/90 (70.00%), Query Frame = 0 

Query: 59  GWGVAVLVGVPNKDDSFKTHPMNLLNEKTLKGTFFGNYKTRSDIPNVVEQYLKKELELEK 118
           GWG+ V +GVP        H    L+ K+LKGT FG +K +SD+P+++++Y+ KE+ +++
Sbjct: 290 GWGMTVTLGVPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDE 349

Query: 119 FITHSVPFSEINKAFDYMLQGQSIRCVIRM 149
           FITH++ F EINKAF  M +G+ +RCV+ M
Sbjct: 350 FITHNLSFDEINKAFVLMREGKCLRCVLHM 379


HSP 2 Score: 73.2 bits (178), Expect = 2.0e-13
Identity = 31/52 (59.62%), Postives = 43/52 (82.69%), Query Frame = 0 

Query: 7  QVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK 59
          QVITC AAVAW AG+PLV+EEVEV+PPQ  E+R+ ++ T+LC +D+  WE++
Sbjct: 12 QVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQ 63

[Close]
BLAST of Carg25050 vs. TAIR 10
Match: AT5G24760.2 (GroES-like zinc-binding dehydrogenase family protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-20
Identity = 40/90 (44.44%), Postives = 63/90 (70.00%), Query Frame = 0 

Query: 59  GWGVAVLVGVPNKDDSFKTHPMNLLNEKTLKGTFFGNYKTRSDIPNVVEQYLKKELELEK 118
           GWG+ V +GVP        H    L+ K+LKGT FG +K +SD+P+++++Y+ KE+ +++
Sbjct: 261 GWGMTVTLGVPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDE 320

Query: 119 FITHSVPFSEINKAFDYMLQGQSIRCVIRM 149
           FITH++ F EINKAF  M +G+ +RCV+ M
Sbjct: 321 FITHNLSFDEINKAFVLMREGKCLRCVLHM 350


HSP 2 Score: 43.5 bits (101), Expect = 1.7e-04
Identity = 16/34 (47.06%), Postives = 27/34 (79.41%), Query Frame = 0 

Query: 25 IEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK 59
          +EEVEV+PPQ  E+R+ ++ T+LC +D+  WE++
Sbjct: 1  MEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQ 34

[Close]
BLAST of Carg25050 vs. TAIR 10
Match: AT5G24760.3 (GroES-like zinc-binding dehydrogenase family protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-20
Identity = 40/90 (44.44%), Postives = 63/90 (70.00%), Query Frame = 0 

Query: 59  GWGVAVLVGVPNKDDSFKTHPMNLLNEKTLKGTFFGNYKTRSDIPNVVEQYLKKELELEK 118
           GWG+ V +GVP        H    L+ K+LKGT FG +K +SD+P+++++Y+ KE+ +++
Sbjct: 261 GWGMTVTLGVPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDE 320

Query: 119 FITHSVPFSEINKAFDYMLQGQSIRCVIRM 149
           FITH++ F EINKAF  M +G+ +RCV+ M
Sbjct: 321 FITHNLSFDEINKAFVLMREGKCLRCVLHM 350


HSP 2 Score: 43.5 bits (101), Expect = 1.7e-04
Identity = 16/34 (47.06%), Postives = 27/34 (79.41%), Query Frame = 0 

Query: 25 IEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK 59
          +EEVEV+PPQ  E+R+ ++ T+LC +D+  WE++
Sbjct: 1  MEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQ 34

[Close]
BLAST of Carg25050 vs. TAIR 10
Match: AT5G43940.1 (GroES-like zinc-binding dehydrogenase family protein )

HSP 1 Score: 94.7 bits (234), Expect = 6.5e-20
Identity = 38/89 (42.70%), Postives = 61/89 (68.54%), Query Frame = 0 

Query: 58  KGWGVAVLVGVPNKDDSFKTHPMNLLNEKTLKGTFFGNYKTRSDIPNVVEQYLKKELELE 117
           KGWG +V+VGV        T P  L+  +  KGT FG +K+R+ +P +VE+Y+ KE++++
Sbjct: 287 KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVD 346

Query: 118 KFITHSVPFSEINKAFDYMLQGQSIRCVI 147
           ++ITH++   EINKAFD + +G  +RCV+
Sbjct: 347 EYITHNLTLGEINKAFDLLHEGTCLRCVL 375


HSP 2 Score: 89.7 bits (221), Expect = 2.1e-18
Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3  STAGQVITCKAAVAWEAGKPLVIEEVEVAPPQANEVRVNILFTALCHTDVYFWEAK 59
          +T GQVITCKAAVA+E  KPLVIE+V+VAPPQA EVR+ IL+TALCHTD Y W  K
Sbjct: 2  ATQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGK 57

The following BLAST results are available for this feature:
BLAST of Carg25050 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7037264.18.1e-81100.00Alcohol dehydrogenase 1, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
GEU53546.12.0e-5862.31alcohol dehydrogenase 2-like [Tanacetum cinerariifolium][more]
KAF2299091.13.8e-5446.04hypothetical protein GH714_030540 [Hevea brasiliensis][more]
XP_023521665.11.0e-5138.68alcohol dehydrogenase 1-like [Cucurbita pepo subsp. pepo] >XP_023523965.1 alcoho... [more]
XP_022926240.11.5e-5038.42alcohol dehydrogenase 1-like [Cucurbita moschata][more]
BLAST of Carg25050 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P136038.8e-4633.77Alcohol dehydrogenase 1 OS=Trifolium repens OX=3899 GN=ADH1 PE=2 SV=1[more]
P251412.0e-4533.95Alcohol dehydrogenase 1 OS=Petunia hybrida OX=4102 GN=ADH1 PE=1 SV=1[more]
P128862.8e-4432.72Alcohol dehydrogenase 1 OS=Pisum sativum OX=3888 PE=1 SV=1[more]
P489774.9e-4432.98Alcohol dehydrogenase OS=Malus domestica OX=3750 GN=ADH PE=2 SV=1[more]
P065251.6e-4232.45Alcohol dehydrogenase class-P OS=Arabidopsis thaliana OX=3702 GN=ADH1 PE=1 SV=2[more]
BLAST of Carg25050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6L2KWB09.5e-5962.31Alcohol dehydrogenase 2-like OS=Tanacetum cinerariifolium OX=118510 GN=Tci_02552... [more]
A0A6A6LCB41.8e-5446.04Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_030540 PE=3 SV=1[more]
A0A6J1EKJ87.3e-5138.42alcohol dehydrogenase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111433418 PE=3 ... [more]
A0A2P5XJU42.6e-4840.86Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA17022 PE=3 SV... [more]
A0A1D6L3D25.7e-4866.89Alcohol dehydrogenase 1 OS=Zea mays OX=4577 GN=542363 PE=4 SV=1[more]
BLAST of Carg25050 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G77120.11.1e-4332.45alcohol dehydrogenase 1 [more]
AT5G24760.11.3e-2044.44GroES-like zinc-binding dehydrogenase family protein [more]
AT5G24760.21.3e-2044.44GroES-like zinc-binding dehydrogenase family protein [more]
AT5G24760.31.3e-2044.44GroES-like zinc-binding dehydrogenase family protein [more]
AT5G43940.16.5e-2042.70GroES-like zinc-binding dehydrogenase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.180.10coord: 14..57
e-value: 5.8E-13
score: 50.5
NoneNo IPR availableGENE3D3.90.180.10coord: 92..140
e-value: 2.5E-25
score: 91.4
NoneNo IPR availableGENE3D3.40.50.720coord: 58..91
e-value: 2.5E-25
score: 91.4
NoneNo IPR availablePANTHERPTHR43880:SF53ALCOHOL DEHYDROGENASE 1coord: 58..148
NoneNo IPR availablePANTHERPTHR43880ALCOHOL DEHYDROGENASEcoord: 4..58
NoneNo IPR availablePANTHERPTHR43880:SF53ALCOHOL DEHYDROGENASE 1coord: 4..58
NoneNo IPR availablePANTHERPTHR43880ALCOHOL DEHYDROGENASEcoord: 58..148
IPR011032GroES-like superfamilySUPERFAMILY50129GroES-likecoord: 4..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25050-RACarg25050-RAmRNA