Carg25029 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25029
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	REF/SRPP-like protein At3g05500
Location	Carg_Chr11: 6254357 .. 6256753 (+)
RNA-Seq Expression	Carg25029
Synteny	Carg25029

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGACTTTCTAGATCTACGCTCCCATTGAGCTTCCAGTTTCCACCATGGCCGTCCGTTTCGACCGACTCTCAACCTGCGTTCTTCTCACCTATAAATTCCCTTTCTTCTCCTTCTCCCTCTTCCATCGATTCTATCGCTAAGCATTTTGATTTCCCTACAAAATCAAACATCAAATCGCATCTTTCTTCCGTTTTCCATCTCGAGCTCCTCTTGAGTTTCCCCCACGTTTTTTCGCTATGGCTGATTCCAATCCTTCGTCGCAGCACCATGAAATGGTACGATTCTCTCATCACTCGAATTTCTTGCGGTTTTTATTTTTGATCTAATTGGATTTGTCGATTTTGTGCGGAATTTCTGTTTTCTGAGATTGTGAGGATTGATCGATTGGATTTTGTGTAGGCGGCTAGGGCAGAGGAGGAGAGGCTGAAGTATTTGGAGTTTGTTCAAACGGCGGCGTTTCGAGCGACGGAGTGTTTCTTCAACGTTTATGGCTATGCGAAGAACCGGATTGGTCCACTGAGGCCCGGCGTTGAGACTGTCGAGGGCACTGTGAAGTCTGTTGTCGGTCCTTTGTACAATAAGTTCCACGGCGTTCCGATTGAGGTTCTTAAGTTCGTCGATCGCAAGGTTGGTTTTCTTTCTTCTATTACTGTTCTATGCATGTTCTTCATATAAATTTCTCTTCGTTTTCTTCTCGGATTGATTTATCAGATGCCTTTGGTTAATTATCAATTTCAGCCTATGGATTAAAACTTCTCAATTAAGTAGTTCTATGGAAAGTATAATGACTTTTTGTGGAGATTAAATTTCTAATATACTGTAGACTTTTCGTTTTGGTCCTTGAACTCTGTTTATACTTTCCCTTAGCATGGCTTCAAGTATCTTTGTTGAATATGGACATGTTACATGTATAAGGCTGAGTATTATTTGAGTTCATGCTAGAAGGATCGAAATGAGTGTTCTCTAAAAAGTTCAAGGATCAAATGAAGATTATACCAATTTTGTAGTTGAAATATCTGAATGGAATTCAAATCAGTTTGTTCATACAAAGTTGATATGTTAGGTAGCATTTTGTGCGCATTTCGAATTCTAATGGAAGAACGTGATGAGAAAACTGAGAATTTACAGGATTGAGGTTGAGATTAGCAAGATGGATTTTGTTTAGTTAGTTCTTTCCCTTTGGAATGATGCAAATAACCAAACGTTGAATGCTAAAACACTGAGAAACTTATTTTCTTTGATTGTTAATGTATAGGTTGACGAGTCGGTGACCAAGATCGATCGGCATGTACCGCCAACCATCAAGCAAGCCTCATCGCAGGCCATGTCCGCCGCACAGCAAGCGCCTGAAATTGCCCGAAATGTAGCCTTGGAGGTCAGACACACTGGCCTTAAAGACTCTGTCTCTGGCATTGTGAAATCTGTGTATGCCAAGTACGAGCCAACTGCTAAGCAACTCTACTCCAAATACGAGCCGAAGGCCGAGCAATGCGCAGCTTCGGCATGGCACAGACTCAACCAGCTCCCTGTTTTCCCCACTGTCGCACAAGCCATCTTGCCAACTGCAGTGTACTGCACCGAGAAATACAACGAGACCGTGCAAAGCACCTCCAAGAAGGGCTACAAGGTCTCTTCGTACCTCCCATTGGTCCCTACTGAGAGGATTGCCAAAGTGTTCAGCAAGGACAGAATTGAGATGGAGCCCTTGGTGAACTGAGAGCCCTTGGATTTCCTGGTTTCGAAATAACACATCATGAATGTTTTTGTTGAACGGAGGCACACTTACATGTTGGTGTTGTCATCCTCTCTGAGCCTTGTGTTGTTTTGGCTTCAGATATAGCTATGGCTTTTATGTTTCTTCTTTGGTAAGAGATATTAGTTACACAGGTTTGATATTATATTTGAAGGCTTAATTAATTCCTAGTCTTTGTTTGAGATTTACTTTCTTCCTGCGTATAACATTAGATGGAAAAAATATTTTAATATTTTTCCTAAGGTGAGAAAGCTTCTCCCAAAAGACCGTTTTAAATTCATGAGGCTAATAGCCATATGTGACAGACCAGAATGGATAATATCGACTGGCGGTAGACTTTAGCTGTAGAGTCGACTCTTTATACAAATTTTTAGTGCAGAAGTTTTCGTCCATTTCGCTAACTCGTTCCATTTGTCATTGATATTTTTTTGTCTAAATTCATGCACTTGATATTTTCACGAAAGGATAATGTTTAGAAATTTTGTAGTAATACCTGGACAGTATCGCAAACCAAATAACACAATCATACTAACCAAACTAAGAAGAAAGTAGATGGTGATGACTTTCATGTGCAAACAAGATAGAAGGCAACACGTGAATGACGCCCATCGAATTACATTAAGGTCATGATAGATAAGTAT

mRNA sequence

ATTTGACTTTCTAGATCTACGCTCCCATTGAGCTTCCAGTTTCCACCATGGCCGTCCGTTTCGACCGACTCTCAACCTGCGTTCTTCTCACCTATAAATTCCCTTTCTTCTCCTTCTCCCTCTTCCATCGATTCTATCGCTAAGCATTTTGATTTCCCTACAAAATCAAACATCAAATCGCATCTTTCTTCCGTTTTCCATCTCGAGCTCCTCTTGAGTTTCCCCCACGTTTTTTCGCTATGGCTGATTCCAATCCTTCGTCGCAGCACCATGAAATGGCGGCTAGGGCAGAGGAGGAGAGGCTGAAGTATTTGGAGTTTGTTCAAACGGCGGCGTTTCGAGCGACGGAGTGTTTCTTCAACGTTTATGGCTATGCGAAGAACCGGATTGGTCCACTGAGGCCCGGCGTTGAGACTGTCGAGGGCACTGTGAAGTCTGTTGTCGGTCCTTTGTACAATAAGTTCCACGGCGTTCCGATTGAGGTTCTTAAGTTCGTCGATCGCAAGGTTGACGAGTCGGTGACCAAGATCGATCGGCATGTACCGCCAACCATCAAGCAAGCCTCATCGCAGGCCATGTCCGCCGCACAGCAAGCGCCTGAAATTGCCCGAAATGTAGCCTTGGAGGTCAGACACACTGGCCTTAAAGACTCTGTCTCTGGCATTGTGAAATCTGTGTATGCCAAGTACGAGCCAACTGCTAAGCAACTCTACTCCAAATACGAGCCGAAGGCCGAGCAATGCGCAGCTTCGGCATGGCACAGACTCAACCAGCTCCCTGTTTTCCCCACTGTCGCACAAGCCATCTTGCCAACTGCAGTGTACTGCACCGAGAAATACAACGAGACCGTGCAAAGCACCTCCAAGAAGGGCTACAAGGTCTCTTCGTACCTCCCATTGGTCCCTACTGAGAGGATTGCCAAAGTGTTCAGCAAGGACAGAATTGAGATGGAGCCCTTGGTGAACTGAGAGCCCTTGGATTTCCTGGTTTCGAAATAACACATCATGAATGTTTTTGTTGAACGGAGGCACACTTACATGTTGGTGTTGTCATCCTCTCTGAGCCTTGTGTTGTTTTGGCTTCAGATATAGCTATGGCTTTTATGTTTCTTCTTTGGTAAGAGATATTAGTTACACAGGTTTGATATTATATTTGAAGGCTTAATTAATTCCTAGTCTTTGTTTGAGATTTACTTTCTTCCTGCGTATAACATTAGATGGAAAAAATATTTTAATATTTTTCCTAAGGTGAGAAAGCTTCTCCCAAAAGACCGTTTTAAATTCATGAGGCTAATAGCCATATGTGACAGACCAGAATGGATAATATCGACTGGCGGTAGACTTTAGCTGTAGAGTCGACTCTTTATACAAATTTTTAGTGCAGAAGTTTTCGTCCATTTCGCTAACTCGTTCCATTTGTCATTGATATTTTTTTGTCTAAATTCATGCACTTGATATTTTCACGAAAGGATAATGTTTAGAAATTTTGTAGTAATACCTGGACAGTATCGCAAACCAAATAACACAATCATACTAACCAAACTAAGAAGAAAGTAGATGGTGATGACTTTCATGTGCAAACAAGATAGAAGGCAACACGTGAATGACGCCCATCGAATTACATTAAGGTCATGATAGATAAGTAT

Coding sequence (CDS)

ATGGCTGATTCCAATCCTTCGTCGCAGCACCATGAAATGGCGGCTAGGGCAGAGGAGGAGAGGCTGAAGTATTTGGAGTTTGTTCAAACGGCGGCGTTTCGAGCGACGGAGTGTTTCTTCAACGTTTATGGCTATGCGAAGAACCGGATTGGTCCACTGAGGCCCGGCGTTGAGACTGTCGAGGGCACTGTGAAGTCTGTTGTCGGTCCTTTGTACAATAAGTTCCACGGCGTTCCGATTGAGGTTCTTAAGTTCGTCGATCGCAAGGTTGACGAGTCGGTGACCAAGATCGATCGGCATGTACCGCCAACCATCAAGCAAGCCTCATCGCAGGCCATGTCCGCCGCACAGCAAGCGCCTGAAATTGCCCGAAATGTAGCCTTGGAGGTCAGACACACTGGCCTTAAAGACTCTGTCTCTGGCATTGTGAAATCTGTGTATGCCAAGTACGAGCCAACTGCTAAGCAACTCTACTCCAAATACGAGCCGAAGGCCGAGCAATGCGCAGCTTCGGCATGGCACAGACTCAACCAGCTCCCTGTTTTCCCCACTGTCGCACAAGCCATCTTGCCAACTGCAGTGTACTGCACCGAGAAATACAACGAGACCGTGCAAAGCACCTCCAAGAAGGGCTACAAGGTCTCTTCGTACCTCCCATTGGTCCCTACTGAGAGGATTGCCAAAGTGTTCAGCAAGGACAGAATTGAGATGGAGCCCTTGGTGAACTGA

Protein sequence

MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPLVN

Homology

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BLAST of Carg25029 vs. NCBI nr
Match: KAG6588484.1 (REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022313.1 REF/SRPP-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 476.5 bits (1225), Expect = 1.4e-130
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

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BLAST of Carg25029 vs. NCBI nr
Match: XP_022933698.1 (REF/SRPP-like protein At3g05500 [Cucurbita moschata])

HSP 1 Score: 474.2 bits (1219), Expect = 6.9e-130
Identity = 241/242 (99.59%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVD SVTKIDRHVPPTIKQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

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BLAST of Carg25029 vs. NCBI nr
Match: XP_023530281.1 (REF/SRPP-like protein At3g05500 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 473.4 bits (1217), Expect = 1.2e-129
Identity = 241/242 (99.59%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADSNPSSQH EMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV
Sbjct: 1   MADSNPSSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

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BLAST of Carg25029 vs. NCBI nr
Match: XP_022969922.1 (REF/SRPP-like protein At3g05500 [Cucurbita maxima])

HSP 1 Score: 472.6 bits (1215), Expect = 2.0e-129
Identity = 239/242 (98.76%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRA+ECFFN YGYAKNRIGPLRPGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRASECFFNAYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           EIARNVA+EVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP
Sbjct: 121 EIARNVAMEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

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BLAST of Carg25029 vs. NCBI nr
Match: XP_008450634.1 (PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo])

HSP 1 Score: 426.8 bits (1096), Expect = 1.3e-115
Identity = 214/242 (88.43%), Postives = 231/242 (95.45%), Query Frame = 0


Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADS+ SSQ  +MA RA+E+RLKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSDHSSQRQDMAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPL NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPT+K ASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLCNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           E+ARNVA EVR +GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCAASAWH+LNQLP
Sbjct: 121 EVARNVASEVRRSGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTA YCTEKYNETV++++KKGYKVSSYLPLVPTERIAKVFSK+ +EMEPL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

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BLAST of Carg25029 vs. ExPASy Swiss-Prot
Match: Q9MA63 (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=1 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.1e-77
Identity = 140/240 (58.33%), Postives = 188/240 (78.33%), Query Frame = 0


Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MA     +Q      + E+ERLKYL+FVQ AA  A   F  +Y  AK++ GPL+PGVE+V
Sbjct: 1   MATQTDLAQPKLDMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EG VK+VVGP+Y K+H VP+EVLK++D+KVD SVT++DR VPP +KQ S+QA+SAAQ AP
Sbjct: 61  EGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
            +AR +A EVR  G+ ++ SG+ KSVY+KYEP AK+LY+ YEPKAEQCA SAW +LNQLP
Sbjct: 121 IVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           +FP +AQ  +PTA +C+EKYN+TV   ++KGY+V+SY+PLVPTERI+K+F++++ E EPL
Sbjct: 181 LFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

[Close]

BLAST of Carg25029 vs. ExPASy Swiss-Prot
Match: Q9SW70 (Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 9.2e-69
Identity = 131/230 (56.96%), Postives = 172/230 (74.78%), Query Frame = 0


Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MA+S    Q        EE+RLKYL+FVQ AA     CF ++Y YAK   GPL+PGV+TV
Sbjct: 1   MAESEAKQQPE--TVHGEEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVK+V+GP+Y KF+ VP E+L FVDRKV+ S+ +++RHVP  +K+AS QA++ AQ+AP
Sbjct: 61  EGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           E+A  VA EV+  G+ D+   I K+VY+K EPTAK+L SKYEP AEQ A SAW  LN+LP
Sbjct: 121 ELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVF 231
           +FP VAQ ++PTA Y +EKYN++V  T+++GY V+ YLPL+PTERIAKVF
Sbjct: 181 LFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVF 228

[Close]

BLAST of Carg25029 vs. ExPASy Swiss-Prot
Match: A2Y0H2 (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_017815 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.6e-58
Identity = 115/219 (52.51%), Postives = 154/219 (70.32%), Query Frame = 0


Query: 12  EMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPL 71
           EM A AEEERL+YLEFVQ AA +        Y YAK   GPLRPGV+ VEGTVK+VVGP+
Sbjct: 25  EMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPV 84

Query: 72  YNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVR 131
           Y++FHGVP+++LKF+DRKV ESV ++DR VPP +K           +AP +AR+ A EVR
Sbjct: 85  YDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK-----------EAPGLARSAAAEVR 144

Query: 132 HTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILP 191
             GL  + +G+ KS  A+ EP A+ LY++YEP AE+ AA AW  LN+LP+ P+V +A+LP
Sbjct: 145 QAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLP 204

Query: 192 TAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVF 231
            A   + +YN  V   +K+G  V++YLPLVPTER+++VF
Sbjct: 205 AAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

[Close]

BLAST of Carg25029 vs. ExPASy Swiss-Prot
Match: Q9FRA7 (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0151300 PE=2 SV=2)

HSP 1 Score: 225.7 bits (574), Expect = 5.6e-58
Identity = 115/219 (52.51%), Postives = 154/219 (70.32%), Query Frame = 0


Query: 12  EMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPL 71
           EM A AEEERL+YLEFVQ AA +        Y YAK   GPLRPGV+ VEGTVK+VVGP+
Sbjct: 25  EMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPV 84

Query: 72  YNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVR 131
           Y++FHGVP+++LKF+DRKV ESV ++DR VPP +K           +AP +AR+ A EVR
Sbjct: 85  YDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK-----------EAPGLARSAAAEVR 144

Query: 132 HTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILP 191
             GL  + +G+ KS  A+ EP A+ LY++YEP AE+ AA AW  LN+LP+ P+V +A+LP
Sbjct: 145 QAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLP 204

Query: 192 TAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVF 231
            A   + +YN  V   +K+G  V++YLPLVPTER+++VF
Sbjct: 205 AAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

[Close]

BLAST of Carg25029 vs. ExPASy Swiss-Prot
Match: O82803 (Small rubber particle protein OS=Hevea brasiliensis OX=3981 GN=SRPP PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 6.0e-52
Identity = 110/221 (49.77%), Postives = 146/221 (66.06%), Query Frame = 0


Query: 13  MAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLY 72
           MA   EEERLKYL+FV+ A   A + F  +Y YAK+  GPL+PGV+T+E  VK+VV P+Y
Sbjct: 1   MAEEVEEERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTVVTPVY 60

Query: 73  NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRH 132
                +P+E +KFVD+ VD SVT +D  VPP IKQ S+Q  S AQ AP I  +VA  V +
Sbjct: 61  Y----IPLEAVKFVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFN 120

Query: 133 TGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPT 192
           TG+++                AK LY+  EPKAEQ A   W  LN+LP+ P VA  ++PT
Sbjct: 121 TGVQEG---------------AKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPT 180

Query: 193 AVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKD 234
           AVY +EKYN+ V+ T+++GY+VSSYLPL+PTE+I KVF  +
Sbjct: 181 AVYFSEKYNDVVRGTTEQGYRVSSYLPLLPTEKITKVFGDE 202

[Close]

BLAST of Carg25029 vs. ExPASy TrEMBL
Match: A0A6J1F5J8 (REF/SRPP-like protein At3g05500 OS=Cucurbita moschata OX=3662 GN=LOC111441035 PE=3 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 3.3e-130
Identity = 241/242 (99.59%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVD SVTKIDRHVPPTIKQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]

BLAST of Carg25029 vs. ExPASy TrEMBL
Match: A0A6J1HXN7 (REF/SRPP-like protein At3g05500 OS=Cucurbita maxima OX=3661 GN=LOC111468972 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 9.7e-130
Identity = 239/242 (98.76%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRA+ECFFN YGYAKNRIGPLRPGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRASECFFNAYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           EIARNVA+EVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP
Sbjct: 121 EIARNVAMEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]

BLAST of Carg25029 vs. ExPASy TrEMBL
Match: A0A1S3BP12 (REF/SRPP-like protein At3g05500 OS=Cucumis melo OX=3656 GN=LOC103492163 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 6.1e-116
Identity = 214/242 (88.43%), Postives = 231/242 (95.45%), Query Frame = 0


Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADS+ SSQ  +MA RA+E+RLKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSDHSSQRQDMAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPL NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPT+K ASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLCNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           E+ARNVA EVR +GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCAASAWH+LNQLP
Sbjct: 121 EVARNVASEVRRSGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTA YCTEKYNETV++++KKGYKVSSYLPLVPTERIAKVFSK+ +EMEPL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]

BLAST of Carg25029 vs. ExPASy TrEMBL
Match: A0A0A0M1J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569430 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.8e-113
Identity = 210/242 (86.78%), Postives = 227/242 (93.80%), Query Frame = 0


Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADS+ SSQ  +M  RA++  LKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVV PLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPT+KQASSQAM AAQQAP
Sbjct: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           E+AR+VA EVR  GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCAASAWH+LNQLP
Sbjct: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTA YCTEKYNETV++++KKGYKVSSYLPLVPTERIAKVFSK+ +EMEPL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]

BLAST of Carg25029 vs. ExPASy TrEMBL
Match: A0A5D3CFW4 (REF/SRPP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003980 PE=3 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.8e-112
Identity = 207/230 (90.00%), Postives = 222/230 (96.52%), Query Frame = 0


Query: 13  MAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLY 72
           MA RA+E+RLKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETVEGTVKSVVGPL 
Sbjct: 1   MAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLC 60

Query: 73  NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRH 132
           NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPT+K ASSQAMSAAQQAPE+ARNVA EVR 
Sbjct: 61  NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAPEVARNVASEVRR 120

Query: 133 TGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPT 192
           +GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCAASAWH+LNQLPVFPTVAQAILPT
Sbjct: 121 SGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLPVFPTVAQAILPT 180

Query: 193 AVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPLVN 243
           A YCTEKYNETV++++KKGYKVSSYLPLVPTERIAKVFSK+ +EMEPLVN
Sbjct: 181 AAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPLVN 230

[Close]

BLAST of Carg25029 vs. TAIR 10
Match: AT3G05500.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 289.3 bits (739), Expect = 2.9e-78
Identity = 140/240 (58.33%), Postives = 188/240 (78.33%), Query Frame = 0


Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MA     +Q      + E+ERLKYL+FVQ AA  A   F  +Y  AK++ GPL+PGVE+V
Sbjct: 1   MATQTDLAQPKLDMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EG VK+VVGP+Y K+H VP+EVLK++D+KVD SVT++DR VPP +KQ S+QA+SAAQ AP
Sbjct: 61  EGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
            +AR +A EVR  G+ ++ SG+ KSVY+KYEP AK+LY+ YEPKAEQCA SAW +LNQLP
Sbjct: 121 IVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           +FP +AQ  +PTA +C+EKYN+TV   ++KGY+V+SY+PLVPTERI+K+F++++ E EPL
Sbjct: 181 LFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

[Close]

BLAST of Carg25029 vs. TAIR 10
Match: AT2G47780.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 177.2 bits (448), Expect = 1.6e-44
Identity = 93/217 (42.86%), Postives = 133/217 (61.29%), Query Frame = 0


Query: 18  EEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLYNKFHG 77
           +E +LK+LEF+Q AA     CF  +Y  AK+  GPL+ GVE +E  V++V+ PLY KFH 
Sbjct: 37  DEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHD 96

Query: 78  VPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRHTGLKD 137
           VP ++L FVDRKVD+    ++ +VP  +KQASSQA++           VA EV+ TG+ D
Sbjct: 97  VPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALT-----------VATEVQRTGVVD 156

Query: 138 SVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPTAVYCT 197
           +   I +SV             KYEP AE  AA+ W  LNQLP+FP VA  ++PTA Y +
Sbjct: 157 TTKSIARSV-----------RDKYEPAAEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWS 216

Query: 198 EKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDR 235
           EKYN+ V+    + Y  + YLP++P E+I+ +  +D+
Sbjct: 217 EKYNDAVRYVGDRDYFGAEYLPMIPIEKISDILEQDQ 231

[Close]

BLAST of Carg25029 vs. TAIR 10
Match: AT1G67360.2 (Rubber elongation factor protein (REF) )

HSP 1 Score: 118.6 bits (296), Expect = 6.8e-27
Identity = 75/217 (34.56%), Postives = 105/217 (48.39%), Query Frame = 0


Query: 17  AEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLYNKFH 76
           ++E  LK+L FV+ A         N+Y YAK   GPL+  VE VEG V +VV P+Y KF 
Sbjct: 8   SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFK 67

Query: 77  GVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRHTGLK 136
            VP  +L F+D KV E   K D H PP  K+  +QA     +A E A++   E R  G K
Sbjct: 68  DVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPK 127

Query: 137 DSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPTAVYC 196
            + +      YA  E         Y+      +   W +LNQ      +    LP A + 
Sbjct: 128 AAFN------YAATE---------YKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHF 187

Query: 197 TEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKD 234
           + +YN+ V   +  GY +  YLPLVP + I K + K+
Sbjct: 188 SSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEKE 209

[Close]

BLAST of Carg25029 vs. TAIR 10
Match: AT1G67360.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 118.6 bits (296), Expect = 6.8e-27
Identity = 75/217 (34.56%), Postives = 105/217 (48.39%), Query Frame = 0


Query: 17  AEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLYNKFH 76
           ++E  LK+L FV+ A         N+Y YAK   GPL+  VE VEG V +VV P+Y KF 
Sbjct: 8   SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFK 67

Query: 77  GVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRHTGLK 136
            VP  +L F+D KV E   K D H PP  K+  +QA     +A E A++   E R  G K
Sbjct: 68  DVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPK 127

Query: 137 DSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPTAVYC 196
            + +      YA  E         Y+      +   W +LNQ      +    LP A + 
Sbjct: 128 AAFN------YAATE---------YKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHF 187

Query: 197 TEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKD 234
           + +YN+ V   +  GY +  YLPLVP + I K + K+
Sbjct: 188 SSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEKE 209

The following BLAST results are available for this feature:

BLAST of Carg25029 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588484.1	1.4e-130	100.00	REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG70223...	[more]
XP_022933698.1	6.9e-130	99.59	REF/SRPP-like protein At3g05500 [Cucurbita moschata]	[more]
XP_023530281.1	1.2e-129	99.59	REF/SRPP-like protein At3g05500 [Cucurbita pepo subsp. pepo]	[more]
XP_022969922.1	2.0e-129	98.76	REF/SRPP-like protein At3g05500 [Cucurbita maxima]	[more]
XP_008450634.1	1.3e-115	88.43	PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo]	[more]

BLAST of Carg25029 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MA63	4.1e-77	58.33	REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=...	[more]
Q9SW70	9.2e-69	56.96	Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1	[more]
A2Y0H2	5.6e-58	52.51	REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_0...	[more]
Q9FRA7	5.6e-58	52.51	REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonic...	[more]
O82803	6.0e-52	49.77	Small rubber particle protein OS=Hevea brasiliensis OX=3981 GN=SRPP PE=1 SV=1	[more]

BLAST of Carg25029 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5J8	3.3e-130	99.59	REF/SRPP-like protein At3g05500 OS=Cucurbita moschata OX=3662 GN=LOC111441035 PE...	[more]
A0A6J1HXN7	9.7e-130	98.76	REF/SRPP-like protein At3g05500 OS=Cucurbita maxima OX=3661 GN=LOC111468972 PE=3...	[more]
A0A1S3BP12	6.1e-116	88.43	REF/SRPP-like protein At3g05500 OS=Cucumis melo OX=3656 GN=LOC103492163 PE=3 SV=...	[more]
A0A0A0M1J0	2.8e-113	86.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569430 PE=3 SV=1	[more]
A0A5D3CFW4	1.8e-112	90.00	REF/SRPP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16...	[more]

BLAST of Carg25029 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05500.1	2.9e-78	58.33	Rubber elongation factor protein (REF)	[more]
AT2G47780.1	1.6e-44	42.86	Rubber elongation factor protein (REF)	[more]
AT1G67360.2	6.8e-27	34.56	Rubber elongation factor protein (REF)	[more]
AT1G67360.1	6.8e-27	34.56	Rubber elongation factor protein (REF)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008802	Rubber elongation factor	PFAM	PF05755	REF	coord: 17..231 e-value: 8.1E-89 score: 296.9
IPR008802	Rubber elongation factor	PANTHER	PTHR33732	REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940	coord: 10..233
None	No IPR available	PANTHER	PTHR33732:SF9	REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940	coord: 10..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25029-RA	Carg25029-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080186	developmental vegetative growth
biological_process	GO:0034389	lipid droplet organization
biological_process	GO:0019915	lipid storage
biological_process	GO:0045927	positive regulation of growth
biological_process	GO:1902584	positive regulation of response to water deprivation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005811	lipid droplet
molecular_function	GO:0003746	translation elongation factor activity