Carg25013 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25013
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	SpoU_methylase domain-containing protein
Location	Carg_Chr11: 6416496 .. 6417340 (-)
RNA-Seq Expression	Carg25013
Synteny	Carg25013

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTGCATTTGTGGATGAGGAGGAGGGTGTCTATCTTTTCTTCTACCGCTGTCTGAACCGTCGAAGCTCTTCAACGCGCAGCCATGGCGTCCTGCAGAATCGCAGTCCGACCTTCACTATTTCTACTTGGAAGCTGCAGTCCCCGTACAACTCAACGAATTCTCCCTTCTGTTTCCTTCTCCTCACCACCGCTTTCTTCCTACTCTCCATTCTTCACCGCCGTCTCAAACCATTGTACTCTTCTCTCACTCCCTCTCTTTCTCGCTCTCGGAGGCCATACAATATCTTTTGCATTTCTTTCTTAAAGCTGTTCTTGACTTTCCTTCTGTTTTGATTGCTTTACAGCCTCAAGAAACAACCCTAAGGCAGTTTCTACAAGATGTTTTTCCTCGACTTCGGCCGCTGCATCAGTAGAAGTAACAGACTCTGTAGGAAGTGACCTAGAACCGCCGGAGATTCATACACAAGACACGGTGGAGCACCTTCTCACACACTCCGATGACGTTGCCAGGTTGATGAAGATGGAGCGGAGGCCGATTAATTTAGATGGAGATGAATATCCGCGTCAAGGGCGATGGTTTCCGTACCTGGATAAGTTTAGCTGTGAAAGTTCTTGGTTGAATAGTGGTGAGGTTTTGGACGCCTTGGATCCTCTCATATTGGACTCGAGGAAAGAGCGGTTCAAGAACGTCGTGCGACACAGGAGCTATTCGGTTTGTTTGGTGGTAGAAGGTTTGAGTGATTTCGGTAACGTCTCGGCGGCGTTTCGATCTGCCGATGCACTTGGATTTCAGTCGGTTCATGTGGTCTCTTGCGACGCTTCCAAAAGGTGCAAGAATGATTGA

mRNA sequence

CACTGCATTTGTGGATGAGGAGGAGGGTGTCTATCTTTTCTTCTACCGCTGTCTGAACCGTCGAAGCTCTTCAACGCGCAGCCATGGCGTCCTGCAGAATCGCAGTCCGACCTTCACTATTTCTACTTGGAAGCTGCAGTCCCCGTACAACTCAACGAATTCTCCCTTCTGTTTCCTTCTCCTCACCACCGCTTTCTTCCTACTCTCCATTCTTCACCGCCGTCTCAAACCATTCCTCAAGAAACAACCCTAAGGCAGTTTCTACAAGATGTTTTTCCTCGACTTCGGCCGCTGCATCAGTAGAAGTAACAGACTCTGTAGGAAGTGACCTAGAACCGCCGGAGATTCATACACAAGACACGGTGGAGCACCTTCTCACACACTCCGATGACGTTGCCAGGTTGATGAAGATGGAGCGGAGGCCGATTAATTTAGATGGAGATGAATATCCGCGTCAAGGGCGATGGTTTCCGTACCTGGATAAGTTTAGCTGTGAAAGTTCTTGGTTGAATAGTGGTGAGGTTTTGGACGCCTTGGATCCTCTCATATTGGACTCGAGGAAAGAGCGGTTCAAGAACGTCGTGCGACACAGGAGCTATTCGGTTTGTTTGGTGGTAGAAGGTTTGAGTGATTTCGGTAACGTCTCGGCGGCGTTTCGATCTGCCGATGCACTTGGATTTCAGTCGGTTCATGTGGTCTCTTGCGACGCTTCCAAAAGGTGCAAGAATGATTGA

Coding sequence (CDS)

ATGGCGTCCTGCAGAATCGCAGTCCGACCTTCACTATTTCTACTTGGAAGCTGCAGTCCCCGTACAACTCAACGAATTCTCCCTTCTGTTTCCTTCTCCTCACCACCGCTTTCTTCCTACTCTCCATTCTTCACCGCCGTCTCAAACCATTCCTCAAGAAACAACCCTAAGGCAGTTTCTACAAGATGTTTTTCCTCGACTTCGGCCGCTGCATCAGTAGAAGTAACAGACTCTGTAGGAAGTGACCTAGAACCGCCGGAGATTCATACACAAGACACGGTGGAGCACCTTCTCACACACTCCGATGACGTTGCCAGGTTGATGAAGATGGAGCGGAGGCCGATTAATTTAGATGGAGATGAATATCCGCGTCAAGGGCGATGGTTTCCGTACCTGGATAAGTTTAGCTGTGAAAGTTCTTGGTTGAATAGTGGTGAGGTTTTGGACGCCTTGGATCCTCTCATATTGGACTCGAGGAAAGAGCGGTTCAAGAACGTCGTGCGACACAGGAGCTATTCGGTTTGTTTGGTGGTAGAAGGTTTGAGTGATTTCGGTAACGTCTCGGCGGCGTTTCGATCTGCCGATGCACTTGGATTTCAGTCGGTTCATGTGGTCTCTTGCGACGCTTCCAAAAGGTGCAAGAATGATTGA

Protein sequence

MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVSTRCFSSTSAAASVEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGFQSVHVVSCDASKRCKND

Homology

[Close]

BLAST of Carg25013 vs. NCBI nr
Match: KAG7022329.1 (hypothetical protein SDJN02_16060 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 430.6 bits (1106), Expect = 7.8e-117
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS 60
           MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS
Sbjct: 1   MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS 60

Query: 61  TRCFSSTSAAASVEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDGD 120
           TRCFSSTSAAASVEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDGD
Sbjct: 61  TRCFSSTSAAASVEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDGD 120

Query: 121 EYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEG 180
           EYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEG
Sbjct: 121 EYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEG 180

Query: 181 LSDFGNVSAAFRSADALGFQSVHVVSCDASKRCKND 217
           LSDFGNVSAAFRSADALGFQSVHVVSCDASKRCKND
Sbjct: 181 LSDFGNVSAAFRSADALGFQSVHVVSCDASKRCKND 216

[Close]

BLAST of Carg25013 vs. NCBI nr
Match: XP_022933839.1 (uncharacterized protein LOC111441136 [Cucurbita moschata])

HSP 1 Score: 414.1 bits (1063), Expect = 7.5e-112
Identity = 211/217 (97.24%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS 60
           MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS
Sbjct: 1   MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS 60

Query: 61  TRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDG 120
            RCFSSTSAAA SVEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDG
Sbjct: 61  IRCFSSTSAAASSVEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDG 120

Query: 121 DEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE 180
           DEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE
Sbjct: 121 DEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE 180

Query: 181 GLSDFGNVSAAFRSADALGFQSVHVVSCDASKRCKND 217
           GLSDFGNVSAAFRSADALGFQSVHVVSCDASKR + +
Sbjct: 181 GLSDFGNVSAAFRSADALGFQSVHVVSCDASKRYREN 217

[Close]

BLAST of Carg25013 vs. NCBI nr
Match: KAG6588498.1 (hypothetical protein SDJN03_17063, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 412.9 bits (1060), Expect = 1.7e-111
Identity = 211/217 (97.24%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS 60
           MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS
Sbjct: 1   MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS 60

Query: 61  TRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDG 120
           TRCFSSTSAAA SVEVTDSVGSDLEPPEIHTQDTVEHLLTHS DVARLMKMERRPINLDG
Sbjct: 61  TRCFSSTSAAASSVEVTDSVGSDLEPPEIHTQDTVEHLLTHSYDVARLMKMERRPINLDG 120

Query: 121 DEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE 180
           DEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE
Sbjct: 121 DEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE 180

Query: 181 GLSDFGNVSAAFRSADALGFQSVHVVSCDASKRCKND 217
           GLSDFGNVSAAFRSADALGFQSVHVVSCDASKR + +
Sbjct: 181 GLSDFGNVSAAFRSADALGFQSVHVVSCDASKRYREN 217

[Close]

BLAST of Carg25013 vs. NCBI nr
Match: XP_023530258.1 (uncharacterized protein LOC111792877 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 408.7 bits (1049), Expect = 3.2e-110
Identity = 209/217 (96.31%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS 60
           MASCRIAVRPSLFLLGSCS RTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS
Sbjct: 1   MASCRIAVRPSLFLLGSCSSRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS 60

Query: 61  TRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDG 120
           TRCFSSTSAAA SVEVTDSVGSDLEPPEIH QDTVE+LLTHSDDVARLMKMERRPINLDG
Sbjct: 61  TRCFSSTSAAASSVEVTDSVGSDLEPPEIHAQDTVENLLTHSDDVARLMKMERRPINLDG 120

Query: 121 DEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE 180
           DEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE
Sbjct: 121 DEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE 180

Query: 181 GLSDFGNVSAAFRSADALGFQSVHVVSCDASKRCKND 217
           GLSDFGNVSAAFRSADALGFQSVHVVSCDASKR + +
Sbjct: 181 GLSDFGNVSAAFRSADALGFQSVHVVSCDASKRYREN 217

[Close]

BLAST of Carg25013 vs. NCBI nr
Match: XP_022969711.1 (uncharacterized protein LOC111468788 [Cucurbita maxima])

HSP 1 Score: 399.1 bits (1024), Expect = 2.5e-107
Identity = 204/217 (94.01%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 1   MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS 60
           MASCRIAVRPSLFLLGSCS RTTQ ILPSVSF SPPLSSYSPFFTAVSNHSSRNNPKAV 
Sbjct: 1   MASCRIAVRPSLFLLGSCSSRTTQLILPSVSFPSPPLSSYSPFFTAVSNHSSRNNPKAVF 60

Query: 61  TRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDG 120
           TRCFSSTSAAA SVEVTD+VGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDG
Sbjct: 61  TRCFSSTSAAASSVEVTDAVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDG 120

Query: 121 DEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE 180
            EYP QGRWFPYLDKFSCE+SWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE
Sbjct: 121 AEYPHQGRWFPYLDKFSCENSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE 180

Query: 181 GLSDFGNVSAAFRSADALGFQSVHVVSCDASKRCKND 217
           GLSDFGNVSAAFRSADALGFQSVHVVSCDASKR + +
Sbjct: 181 GLSDFGNVSAAFRSADALGFQSVHVVSCDASKRYREN 217

[Close]

BLAST of Carg25013 vs. ExPASy TrEMBL
Match: A0A6J1F0V5 (uncharacterized protein LOC111441136 OS=Cucurbita moschata OX=3662 GN=LOC111441136 PE=3 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.6e-112
Identity = 211/217 (97.24%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS 60
           MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS
Sbjct: 1   MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS 60

Query: 61  TRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDG 120
            RCFSSTSAAA SVEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDG
Sbjct: 61  IRCFSSTSAAASSVEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDG 120

Query: 121 DEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE 180
           DEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE
Sbjct: 121 DEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE 180

Query: 181 GLSDFGNVSAAFRSADALGFQSVHVVSCDASKRCKND 217
           GLSDFGNVSAAFRSADALGFQSVHVVSCDASKR + +
Sbjct: 181 GLSDFGNVSAAFRSADALGFQSVHVVSCDASKRYREN 217

[Close]

BLAST of Carg25013 vs. ExPASy TrEMBL
Match: A0A6J1HYK4 (uncharacterized protein LOC111468788 OS=Cucurbita maxima OX=3661 GN=LOC111468788 PE=3 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.2e-107
Identity = 204/217 (94.01%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 1   MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS 60
           MASCRIAVRPSLFLLGSCS RTTQ ILPSVSF SPPLSSYSPFFTAVSNHSSRNNPKAV 
Sbjct: 1   MASCRIAVRPSLFLLGSCSSRTTQLILPSVSFPSPPLSSYSPFFTAVSNHSSRNNPKAVF 60

Query: 61  TRCFSSTSAAA-SVEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDG 120
           TRCFSSTSAAA SVEVTD+VGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDG
Sbjct: 61  TRCFSSTSAAASSVEVTDAVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDG 120

Query: 121 DEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE 180
            EYP QGRWFPYLDKFSCE+SWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE
Sbjct: 121 AEYPHQGRWFPYLDKFSCENSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE 180

Query: 181 GLSDFGNVSAAFRSADALGFQSVHVVSCDASKRCKND 217
           GLSDFGNVSAAFRSADALGFQSVHVVSCDASKR + +
Sbjct: 181 GLSDFGNVSAAFRSADALGFQSVHVVSCDASKRYREN 217

[Close]

BLAST of Carg25013 vs. ExPASy TrEMBL
Match: A0A0A0LC15 (SpoU_methylase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824750 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.3e-80
Identity = 161/216 (74.54%), Postives = 179/216 (82.87%), Query Frame = 0


Query: 1   MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS 60
           MASCRI  R SLFLL SCSPR TQRI  SV   S  L S+S FFT   N  SR+NP AVS
Sbjct: 1   MASCRIVSRSSLFLLQSCSPRRTQRIFSSVFLPSLHLPSFSLFFT---NRFSRSNPNAVS 60

Query: 61  TRCFSSTSAAASVEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDGD 120
           TRCF+S SAA S    + + +D+EPPE+ TQDTVEHLLTHS+DVARLMKMERR + LDG 
Sbjct: 61  TRCFASISAATSPLEVEDIVADVEPPEVRTQDTVEHLLTHSNDVARLMKMERRSVELDGA 120

Query: 121 EYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVEG 180
           EYP +GRWFPYLDK+SC SSWLNSGE+L+ALD LILDSRKERFKNVVR+RSYSVCLVVEG
Sbjct: 121 EYPHKGRWFPYLDKYSCGSSWLNSGEILEALDSLILDSRKERFKNVVRNRSYSVCLVVEG 180

Query: 181 LSDFGNVSAAFRSADALGFQSVHVVSCDASKRCKND 217
           L+DFGNVSAAFRSADALGFQSVHVVSCDASKR + +
Sbjct: 181 LTDFGNVSAAFRSADALGFQSVHVVSCDASKRYREN 213

[Close]

BLAST of Carg25013 vs. ExPASy TrEMBL
Match: A0A5A7UJ80 (tRNA (Guanosine(18)-2'-O)-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007650 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.8e-77
Identity = 162/217 (74.65%), Postives = 181/217 (83.41%), Query Frame = 0


Query: 1   MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS 60
           MASCRI  R SL LL S SPR TQR+ PSV   S  L S SPFFT   N  SR+NP AVS
Sbjct: 1   MASCRIVSRSSLTLLQSFSPRRTQRVFPSVFLPSLHLPS-SPFFT---NTLSRSNPNAVS 60

Query: 61  TRCFSSTSAAAS-VEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDG 120
           +RCF+S SAA S +E+ D V +D+EPPE+ TQDTVEHLLTHSDDV+RLMKMERRP+ LDG
Sbjct: 61  SRCFASISAATSPLELADIV-ADVEPPEVPTQDTVEHLLTHSDDVSRLMKMERRPVELDG 120

Query: 121 DEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE 180
            EYP +GRWFPYLDK+S  SSWLNSGE+L+ALD LILD+RKERFKNVVR+RSYSVCLVVE
Sbjct: 121 AEYPHKGRWFPYLDKYSFGSSWLNSGEILEALDSLILDTRKERFKNVVRNRSYSVCLVVE 180

Query: 181 GLSDFGNVSAAFRSADALGFQSVHVVSCDASKRCKND 217
           GLSDFGNVSAAFRSADALGFQSVHVVSCDASKR + +
Sbjct: 181 GLSDFGNVSAAFRSADALGFQSVHVVSCDASKRYREN 212

[Close]

BLAST of Carg25013 vs. ExPASy TrEMBL
Match: A0A1S3B8M3 (tRNA (Guanosine(18)-2'-O)-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103486969 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.8e-77
Identity = 162/217 (74.65%), Postives = 181/217 (83.41%), Query Frame = 0


Query: 1   MASCRIAVRPSLFLLGSCSPRTTQRILPSVSFSSPPLSSYSPFFTAVSNHSSRNNPKAVS 60
           MASCRI  R SL LL S SPR TQR+ PSV   S  L S SPFFT   N  SR+NP AVS
Sbjct: 1   MASCRIVSRSSLTLLQSFSPRRTQRVFPSVFLPSLHLPS-SPFFT---NTLSRSNPNAVS 60

Query: 61  TRCFSSTSAAAS-VEVTDSVGSDLEPPEIHTQDTVEHLLTHSDDVARLMKMERRPINLDG 120
           +RCF+S SAA S +E+ D V +D+EPPE+ TQDTVEHLLTHSDDV+RLMKMERRP+ LDG
Sbjct: 61  SRCFASISAATSPLELADIV-ADVEPPEVPTQDTVEHLLTHSDDVSRLMKMERRPVELDG 120

Query: 121 DEYPRQGRWFPYLDKFSCESSWLNSGEVLDALDPLILDSRKERFKNVVRHRSYSVCLVVE 180
            EYP +GRWFPYLDK+S  SSWLNSGE+L+ALD LILD+RKERFKNVVR+RSYSVCLVVE
Sbjct: 121 AEYPHKGRWFPYLDKYSFGSSWLNSGEILEALDSLILDTRKERFKNVVRNRSYSVCLVVE 180

Query: 181 GLSDFGNVSAAFRSADALGFQSVHVVSCDASKRCKND 217
           GLSDFGNVSAAFRSADALGFQSVHVVSCDASKR + +
Sbjct: 181 GLSDFGNVSAAFRSADALGFQSVHVVSCDASKRYREN 212

[Close]

BLAST of Carg25013 vs. TAIR 10
Match: AT5G15390.1 (tRNA/rRNA methyltransferase (SpoU) family protein )

HSP 1 Score: 145.2 bits (365), Expect = 6.1e-35
Identity = 75/123 (60.98%), Postives = 94/123 (76.42%), Query Frame = 0


Query: 91  QDTVEHLL-THSDDVARLMKMERRPINLDGDEYPRQGRWFPYLDKFSCESSWLNSGEVLD 150
           +DTV+ LL T+  + + LMKMERR  +L   E   +G WFPY D+F C    L+S EVL+
Sbjct: 72  KDTVKGLLTTNRGEASSLMKMERR-CSLSNGEGDCRGSWFPYEDRFRCGEVHLSSREVLE 131

Query: 151 ALDPLILDSRKERFKNVVRHRSYSVCLVVEGLSDFGNVSAAFRSADALGFQSVHVVSCDA 210
           A+ P +++ R +RF+ VV +RSYSVCLVVEGLSDFGN+SAAFRSADALG QSVHVVSCD+
Sbjct: 132 AVSPHMMEERTDRFRRVVENRSYSVCLVVEGLSDFGNISAAFRSADALGIQSVHVVSCDS 191

Query: 211 SKR 213
           SKR
Sbjct: 192 SKR 193

The following BLAST results are available for this feature:

BLAST of Carg25013 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022329.1	7.8e-117	100.00	hypothetical protein SDJN02_16060 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022933839.1	7.5e-112	97.24	uncharacterized protein LOC111441136 [Cucurbita moschata]	[more]
KAG6588498.1	1.7e-111	97.24	hypothetical protein SDJN03_17063, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023530258.1	3.2e-110	96.31	uncharacterized protein LOC111792877 [Cucurbita pepo subsp. pepo]	[more]
XP_022969711.1	2.5e-107	94.01	uncharacterized protein LOC111468788 [Cucurbita maxima]	[more]

BLAST of Carg25013 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg25013 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F0V5	3.6e-112	97.24	uncharacterized protein LOC111441136 OS=Cucurbita moschata OX=3662 GN=LOC1114411...	[more]
A0A6J1HYK4	1.2e-107	94.01	uncharacterized protein LOC111468788 OS=Cucurbita maxima OX=3661 GN=LOC111468788...	[more]
A0A0A0LC15	1.3e-80	74.54	SpoU_methylase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824...	[more]
A0A5A7UJ80	3.8e-77	74.65	tRNA (Guanosine(18)-2'-O)-methyltransferase OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B8M3	3.8e-77	74.65	tRNA (Guanosine(18)-2'-O)-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103486...	[more]

BLAST of Carg25013 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15390.1	6.1e-35	60.98	tRNA/rRNA methyltransferase (SpoU) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	GENE3D	3.40.1280.10		coord: 150..216 e-value: 1.4E-12 score: 49.2
None	No IPR available	PANTHER	PTHR43453:SF1	RRNA METHYLASE-LIKE PROTEIN	coord: 1..215
IPR033671	tRNA (guanosine(18)-2'-O)-methyltransferase	PANTHER	PTHR43453	RRNA METHYLASE-LIKE	coord: 1..215
IPR029028	Alpha/beta knot methyltransferases	SUPERFAMILY	75217	alpha/beta knot	coord: 157..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25013-RA	Carg25013-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030488	tRNA methylation
molecular_function	GO:0008173	RNA methyltransferase activity
molecular_function	GO:0000049	tRNA binding
molecular_function	GO:0008168	methyltransferase activity