Carg25005 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25005
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RanBP2-type domain-containing protein
Location	Carg_Chr03: 301918 .. 305690 (+)
RNA-Seq Expression	Carg25005
Synteny	Carg25005

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTATTCTGTATTTCCAAACCCTTTTCAGCTGATCAAATTCTCAGATTTTGATCTCTTATTCCTTCTCTTTCTCCTCTTTAATCTGGTAAGATTCGCAGTTTAATTCTTCATTTCTTGTTGTAGAACCCATTTTTCTGATTTCTGTAATCATCATCTTCCTGTCGATTTAATTCTTTTTGCAAAATATGGACTGCTTTTTGATATAATCGCGTTTGTTTAATCGAAGTGGTGAAACTCTTAGTTTTTCTGTCCAAATTATTGCTTGTTTGTAGTGTTAGAATGCGAAAGTGCATTTTCTCGTGGATGTTGTTTTGAACTTTCGACCTTCGATGATTGTGTGGGCAATGTGAATTGCCATTGATGAGTTCTTTTGCGTAGGTTGTATGGATTTTTTAAAGATTGAATTTCATCTAGAATTTGAGGATTGAATCCTGTTCTGGACATGCCAAAATCTGAATAAAATGAGCTGTGGAACGAGGTAGCATCAAAACTATCAACCAAATATTTTAGGGGTTCCTTTTTGGATCTGGAATTTCAGGTTTTGAACCAAATATTTTGTGTTATGCATAACCTTCTTGGCCTTCCCGTTTACTTAATATAAAATCAAAACTAATGACAAATGAGAGGTTGGAGAAGGATATTCTTGGCAATGCAGTGGGTGAAATGCTAAATATCATTTTCAGCTATGTATTACTTGAGGCATTGCTATGGTAACACAGAAATGCATTGCTAAAAGCTTCATTGGTGCTGTTTGTGCATAAGACTGACTTGAGGCGTTGCTATGGTAACACAGAAATGCATTGCTAAAAGCTTCATTAGTGCTGTTTGTGCATAAGACTGATTAGCGTTGCCCTTTTAGCAGCGCCTTTTGTGAACGATAAACATTTTATCCTGCATATTTTAGTAATCTCTTGGATTTTTGCCTCAACTCTTCGGTGTTATGGGATTTATAACATCTTGTAGCTTAATTTAGATGGGGTTCTTATCGTTGCTTCGTTTTCTATAGCCATGAATAGAATGCTCTCAAATTATATATCCATTACTGAACAACACAATTTGAATCTGTCCCCCAGCCTTCTCTTGTGAAATGCTTTTATCATTTCATTGATAATCGTGATAGCCATTTACCTAGGGGTGGACATCCAACCGGACAACCATCAACCCAACTCGAATTATAGGGGTTGGGTTGGATTAGTATTTTGGGTTGGGTTTCTTGAACCCGAATCGACTCGGTTCGGTTTTGGGTTCATTGGAAAAACCTCGGGTTGACCCGAACCGAACAAAACTTATAAAATACATTAAGAAGTTAAACGTGTTCATGGGTCGGGTCGGTCAGAGTGATAATCGTGATAGCCATTTACCCCAATCCAGTCATTCTCTCAGGAAACTGTGAGATATGGAGGGCCTCTTTGCTTCACCCAGTTCCCTGACTTAACCTTCGAGTATAACTTTGTTCCAATTGCTTCTTGAAACGATGTTGTGCCAATTTAAGAATAAGGGCTTATTCCAGGACGTTTGGTACCCTTCAGTTATATTTATATTCTTCATGAAACAATATTTGTTTGATTTGCAATGCATTAACTGCATGTAACTTGTGCTGTTTTATCTTACTGACTTTAGAGAAGGCTGCTCTTTCCTCTTTGTATTATTGTCCTATTTAACCATATTCTTATTGGATACTATAGGAAATAAGCACACGCTGGAATGCTACCACTGCTAGCTTACCAAGTGGTGACCCAATACAACAGGCTCCAGGGAAAGCCCATCACAGTGGGGCTCCTCGCCACTAATACTCTTATTCATCTAAGGCCCGGTTTTCTTCGTTCTGTCATCCCGTCCATAGATGATGTCTGGTTTAATGCGTATCTCATCCTCAAGGTGACTACTCTGGCTATTTAGTTATTACCCAATCATCTAATTTTATTATCAACTCTCTGTTTAGGATTAGGTAGCATTGTTGTCGTCATCGTGGTTTTCGTGCTTTATTTTAGGGTTTATAGTTCTTTCTGTTTAGGACCCTTCTTTTTGTTAACACGTTGTTAGCGAAGTCCTAAACAGAATGGCATGTCCCTTTTTCATTCAGCTGTATAACAAATTTTGTAGTTTATAGCGTCATTGTTACAAATAGGTTCTGTCTTTTTTAGTTGGAAAATCAGCTTGCATAGAGAAAATGGAAGAAAACGATGGATTCTATTTGAATATGTATGCTTCAACTGTAAGAAATGTTATGATGTTGAACGTTACAAGACATATCCAGATTTGTTTGTCCCCACATAGCTGTGTAGTTTACAACCTTACAAGGCGTCCTCGGAACACGGTTATTATACGGTAGTCTTCAAAGTATAATAACTCTGAATTTGAGAAAAATGAAAAGCACTCAAGAACTTTGACACTTCGATCGCCTCCCAATATTCTCAGTTTCTTGTTTTTTTACGATTGTATTCCTGTGATCTCTCTCGATAATGAACCGTTGTAGAGTTGTTTTCTTTTTAGTTATTTATTAATTTGTTTGTATGTCTTTTTGAATGAAATAATGTGATGTTTCATTGTGACACTCTCATAACATTGGTATCCTTTGCATTTGGCAGTACAAAGACTTGAAGCGTTTTTTTCTATCACCATTCTACCATGTGGGTGACTCACACCTTGCCTACAACATGATATCTCTACTATGGAAAGGCATTCAATTGGAATCATCAATGGGCAGTACGAAATTTGCCTCGATGGTTGGCGTGTTACTCGTAATGTCACAGGGAATTACCTTGTTGCTTGTCAAATCTCTACTATTCTTCAATTACGAGAAGCCTTACTACCATGAATATTCTGTCGGGTTTTCGGGTGTACTTTTTGCTATGAAAGTTGTTCTTGGTTCTCAATCTGAAAGCTACACTTACGTTCATGGTGTAAGAGTACCATCAAGTCATGCTGCATGGTTAGAACTAATCCTTATCCAAATAGTTTCACCTGGTGTCTCATTCCTCGGTCATCTTGGTGGAATACTTGCTGGTATTCTCTTTTTACGTTTGAAGGGTATGAATTCGGGGTCGGATCCATTGGCCGTTCTTATTAGAAGTGTTGGTCGAATATTGAGTCGTCCTCTTGGATTTTTCTGTCGCTTGAATCCATTTCGGCACCGTAGGATTTTCGGAGGAGGAACCGTTGGTAGACGACAAACGAGTGTCGATACATGGAGGTGTCGAGCATGTACATTTGACAATTCTTGCTTATTACCCAGGTGCGAAATGTGTGGGACGGATCGACAGGATAGGGCGATGCCTTCTCGTCGATTATCACATCGTTTTGATTTAACTCCAGAGGAACTGCGTCGGAGGAGGCTTGAAAGATTTGGATGATGATACAATATCACCAGGTATTTGCTCTTATTTGAAGCCATAGCAACTATATATCTTGGTAATGAAAATGATTTGGAGCATGAAGCATATGTTGACTAACGTAGCAATTTGATTGAATACATATGGAGTAGTCTTGTACATATGGAACGAATTAATATACTTTACATTGTTCTTTTTTTTTTTTTCTTTATAATAGTTGGATATGGATTTAAAAATATTTGTAAAATCTCTCACCCGCGCATTCTCGATAACTTTTCTGTCTTCGACCATCTTTTCAAAAGAAGAGTTATATTTCATAAAATAAGTTGGGTTTGTAAATATAATTATTATATGTTAGTTGGTTATTCACGAGTGGTTCGTAATTGCAGTTTTACTCATGTATTTACATTTTTCATATTAAGTACCATTAGTTCTCTCG

mRNA sequence

AGTTATTCTGTATTTCCAAACCCTTTTCAGCTGATCAAATTCTCAGATTTTGATCTCTTATTCCTTCTCTTTCTCCTCTTTAATCTGGAAATAAGCACACGCTGGAATGCTACCACTGCTAGCTTACCAAGTGGTGACCCAATACAACAGGCTCCAGGGAAAGCCCATCACAGTGGGGCTCCTCGCCACTAATACTCTTATTCATCTAAGGCCCGGTTTTCTTCGTTCTGTCATCCCGTCCATAGATGATGTCTGGTTTAATGCGTATCTCATCCTCAAGTACAAAGACTTGAAGCGTTTTTTTCTATCACCATTCTACCATGTGGGTGACTCACACCTTGCCTACAACATGATATCTCTACTATGGAAAGGCATTCAATTGGAATCATCAATGGGCAGTACGAAATTTGCCTCGATGGTTGGCGTGTTACTCGTAATGTCACAGGGAATTACCTTGTTGCTTGTCAAATCTCTACTATTCTTCAATTACGAGAAGCCTTACTACCATGAATATTCTGTCGGGTTTTCGGGTGTACTTTTTGCTATGAAAGTTGTTCTTGGTTCTCAATCTGAAAGCTACACTTACGTTCATGGTGTAAGAGTACCATCAAGTCATGCTGCATGGTTAGAACTAATCCTTATCCAAATAGTTTCACCTGGTGTCTCATTCCTCGGTCATCTTGGTGGAATACTTGCTGGTATTCTCTTTTTACGTTTGAAGGGTATGAATTCGGGGTCGGATCCATTGGCCGTTCTTATTAGAAGTGTTGGTCGAATATTGAGTCGTCCTCTTGGATTTTTCTGTCGCTTGAATCCATTTCGGCACCGTAGGATTTTCGGAGGAGGAACCGTTGGTAGACGACAAACGAGTGTCGATACATGGAGGTGTCGAGCATGTACATTTGACAATTCTTGCTTATTACCCAGGTGCGAAATGTGTGGGACGGATCGACAGGATAGGGCGATGCCTTCTCGTCGATTATCACATCGTTTTGATTTAACTCCAGAGGAACTGCGTCGGAGGAGGCTTGAAAGATTTGGATGATGATACAATATCACCAGGTATTTGCTCTTATTTGAAGCCATAGCAACTATATATCTTGGTAATGAAAATGATTTGGAGCATGAAGCATATGTTGACTAACGTAGCAATTTGATTGAATACATATGGAGTAGTCTTGTACATATGGAACGAATTAATATACTTTACATTGTTCTTTTTTTTTTTTTCTTTATAATAGTTGGATATGGATTTAAAAATATTTGTAAAATCTCTCACCCGCGCATTCTCGATAACTTTTCTGTCTTCGACCATCTTTTCAAAAGAAGAGTTATATTTCATAAAATAAGTTGGGTTTGTAAATATAATTATTATATGTTAGTTGGTTATTCACGAGTGGTTCGTAATTGCAGTTTTACTCATGTATTTACATTTTTCATATTAAGTACCATTAGTTCTCTCG

Coding sequence (CDS)

ATGCTACCACTGCTAGCTTACCAAGTGGTGACCCAATACAACAGGCTCCAGGGAAAGCCCATCACAGTGGGGCTCCTCGCCACTAATACTCTTATTCATCTAAGGCCCGGTTTTCTTCGTTCTGTCATCCCGTCCATAGATGATGTCTGGTTTAATGCGTATCTCATCCTCAAGTACAAAGACTTGAAGCGTTTTTTTCTATCACCATTCTACCATGTGGGTGACTCACACCTTGCCTACAACATGATATCTCTACTATGGAAAGGCATTCAATTGGAATCATCAATGGGCAGTACGAAATTTGCCTCGATGGTTGGCGTGTTACTCGTAATGTCACAGGGAATTACCTTGTTGCTTGTCAAATCTCTACTATTCTTCAATTACGAGAAGCCTTACTACCATGAATATTCTGTCGGGTTTTCGGGTGTACTTTTTGCTATGAAAGTTGTTCTTGGTTCTCAATCTGAAAGCTACACTTACGTTCATGGTGTAAGAGTACCATCAAGTCATGCTGCATGGTTAGAACTAATCCTTATCCAAATAGTTTCACCTGGTGTCTCATTCCTCGGTCATCTTGGTGGAATACTTGCTGGTATTCTCTTTTTACGTTTGAAGGGTATGAATTCGGGGTCGGATCCATTGGCCGTTCTTATTAGAAGTGTTGGTCGAATATTGAGTCGTCCTCTTGGATTTTTCTGTCGCTTGAATCCATTTCGGCACCGTAGGATTTTCGGAGGAGGAACCGTTGGTAGACGACAAACGAGTGTCGATACATGGAGGTGTCGAGCATGTACATTTGACAATTCTTGCTTATTACCCAGGTGCGAAATGTGTGGGACGGATCGACAGGATAGGGCGATGCCTTCTCGTCGATTATCACATCGTTTTGATTTAACTCCAGAGGAACTGCGTCGGAGGAGGCTTGAAAGATTTGGATGA

Protein sequence

MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYKDLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLVKSLLFFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQIVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRHRRIFGGGTVGRRQTSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTPEELRRRRLERFG

Homology

[Close]

BLAST of Carg25005 vs. NCBI nr
Match: KAG6603179.1 (Rhomboid-like protein 14, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033491.1 Rhomboid-like protein 14, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 624.8 bits (1610), Expect = 4.1e-175
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0


Query: 1   MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK 60
           MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK
Sbjct: 1   MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK 60

Query: 61  DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLV 120
           DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLV
Sbjct: 61  DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLV 120

Query: 121 KSLLFFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ 180
           KSLLFFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ
Sbjct: 121 KSLLFFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ 180

Query: 181 IVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRH 240
           IVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRH
Sbjct: 181 IVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRH 240

Query: 241 RRIFGGGTVGRRQTSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP 300
           RRIFGGGTVGRRQTSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP
Sbjct: 241 RRIFGGGTVGRRQTSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP 300

Query: 301 EELRRRRLERFG 313
           EELRRRRLERFG
Sbjct: 301 EELRRRRLERFG 312

[Close]

BLAST of Carg25005 vs. NCBI nr
Match: XP_022928711.1 (rhomboid-like protein 14, mitochondrial [Cucurbita moschata] >XP_022928712.1 rhomboid-like protein 14, mitochondrial [Cucurbita moschata] >XP_022928713.1 rhomboid-like protein 14, mitochondrial [Cucurbita moschata] >XP_022928714.1 rhomboid-like protein 14, mitochondrial [Cucurbita moschata])

HSP 1 Score: 620.9 bits (1600), Expect = 5.9e-174
Identity = 310/312 (99.36%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK 60
           MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK
Sbjct: 1   MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK 60

Query: 61  DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLV 120
           DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVG LLVMSQGITLLLV
Sbjct: 61  DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGALLVMSQGITLLLV 120

Query: 121 KSLLFFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ 180
           KSLLFFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ
Sbjct: 121 KSLLFFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ 180

Query: 181 IVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRH 240
           IVSPGVSFLGHLGGILAGILFLRLKGMN GSDPLAVLIRSVGRILSRPLGFFCRLNPFRH
Sbjct: 181 IVSPGVSFLGHLGGILAGILFLRLKGMNLGSDPLAVLIRSVGRILSRPLGFFCRLNPFRH 240

Query: 241 RRIFGGGTVGRRQTSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP 300
           RRIFGGGTVGRRQTSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP
Sbjct: 241 RRIFGGGTVGRRQTSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP 300

Query: 301 EELRRRRLERFG 313
           EELRRRRLERFG
Sbjct: 301 EELRRRRLERFG 312

[Close]

BLAST of Carg25005 vs. NCBI nr
Match: XP_022967849.1 (rhomboid-like protein 14, mitochondrial [Cucurbita maxima] >XP_022967850.1 rhomboid-like protein 14, mitochondrial [Cucurbita maxima] >XP_022967852.1 rhomboid-like protein 14, mitochondrial [Cucurbita maxima] >XP_022967853.1 rhomboid-like protein 14, mitochondrial [Cucurbita maxima] >XP_022967854.1 rhomboid-like protein 14, mitochondrial [Cucurbita maxima])

HSP 1 Score: 618.6 bits (1594), Expect = 2.9e-173
Identity = 308/312 (98.72%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK 60
           MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK
Sbjct: 1   MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK 60

Query: 61  DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLV 120
           DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVG LLVMSQGITLLLV
Sbjct: 61  DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGALLVMSQGITLLLV 120

Query: 121 KSLLFFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ 180
           KSLLFFNYE+PYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ
Sbjct: 121 KSLLFFNYERPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ 180

Query: 181 IVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRH 240
           IVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRH
Sbjct: 181 IVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRH 240

Query: 241 RRIFGGGTVGRRQTSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP 300
            RIFGGGTVGRRQTSVDTWRC+ACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP
Sbjct: 241 HRIFGGGTVGRRQTSVDTWRCQACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP 300

Query: 301 EELRRRRLERFG 313
           EELRRRRLERFG
Sbjct: 301 EELRRRRLERFG 312

[Close]

BLAST of Carg25005 vs. NCBI nr
Match: XP_023543363.1 (rhomboid-like protein 14, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 613.2 bits (1580), Expect = 1.2e-171
Identity = 305/312 (97.76%), Postives = 306/312 (98.08%), Query Frame = 0


Query: 1   MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK 60
           MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK
Sbjct: 1   MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK 60

Query: 61  DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLV 120
           D KRFFLSPFYHVGDSHL YNMISLLWKGIQLESSMGSTKFASMVG LLVMSQGITLLLV
Sbjct: 61  DFKRFFLSPFYHVGDSHLVYNMISLLWKGIQLESSMGSTKFASMVGALLVMSQGITLLLV 120

Query: 121 KSLLFFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ 180
           K LLFFNYE+PYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ
Sbjct: 121 KLLLFFNYERPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ 180

Query: 181 IVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRH 240
           IVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVL RSVGRILSRPLGFFCRLNPFRH
Sbjct: 181 IVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLFRSVGRILSRPLGFFCRLNPFRH 240

Query: 241 RRIFGGGTVGRRQTSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP 300
            RIFGGGTVGRRQTSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP
Sbjct: 241 HRIFGGGTVGRRQTSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP 300

Query: 301 EELRRRRLERFG 313
           EELRRRRLERFG
Sbjct: 301 EELRRRRLERFG 312

[Close]

BLAST of Carg25005 vs. NCBI nr
Match: XP_038881196.1 (rhomboid-like protein 14, mitochondrial [Benincasa hispida])

HSP 1 Score: 522.7 bits (1345), Expect = 2.2e-144
Identity = 261/313 (83.39%), Postives = 283/313 (90.42%), Query Frame = 0


Query: 1   MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK 60
           MLPLLAYQVV+QY RLQ  PITVGLLATNTLIHLRP FLR +IPSIDDVWFNA+LILK+K
Sbjct: 1   MLPLLAYQVVSQYYRLQRNPITVGLLATNTLIHLRPNFLRHIIPSIDDVWFNAHLILKHK 60

Query: 61  DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLV 120
           DLKRF LSPFYHVGD HL YNMISLLWKGIQLE+SMGS +FASMV  LLVMSQGITLLL+
Sbjct: 61  DLKRFLLSPFYHVGDPHLVYNMISLLWKGIQLETSMGSIEFASMVSALLVMSQGITLLLI 120

Query: 121 KSLLFFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ 180
           KSLL FNY++PYY+EYSVGFSGVLFAMKVVLGSQ+ESYTY+HG+RVPSSHAAWLELILIQ
Sbjct: 121 KSLLVFNYDRPYYYEYSVGFSGVLFAMKVVLGSQAESYTYLHGIRVPSSHAAWLELILIQ 180

Query: 181 IVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRH 240
           +VSPGVSFLGHLGGILAG+LFLRLKG NSGSD L +LIR  G+ILSRPLGFFCRLNPFR 
Sbjct: 181 MVSPGVSFLGHLGGILAGLLFLRLKGTNSGSDLLTLLIRRAGQILSRPLGFFCRLNPFRQ 240

Query: 241 RRIFGGGTVGRR-QTSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLT 300
           RRIFGGGTVG R  TS+DTWRC+ACTFDNS LL  CEMCGTDRQDR +P   LS +FDLT
Sbjct: 241 RRIFGGGTVGSRPATSIDTWRCQACTFDNSGLLSICEMCGTDRQDRVLPLHHLSRQFDLT 300

Query: 301 PEELRRRRLERFG 313
            EE+RRRRLERFG
Sbjct: 301 REEVRRRRLERFG 313

[Close]

BLAST of Carg25005 vs. ExPASy Swiss-Prot
Match: Q8RXW0 (Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL14 PE=2 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 5.6e-95
Identity = 186/320 (58.13%), Postives = 232/320 (72.50%), Query Frame = 0


Query: 1   MLPLLAYQVVTQYNRLQGK-PITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKY 60
           MLPLLA   V +Y RL  K P+T  LLA NTL++LRP F+  VIP I +VWFN +LI K+
Sbjct: 14  MLPLLALSAVAEYYRLPWKPPVTASLLAANTLVYLRPAFIDPVIPHISEVWFNPHLIFKH 73

Query: 61  KDLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLL 120
           KDLKR FLS FYHV + HL YNM+SLLWKGI+LE+SMGS++FASMV  L+ MSQG+TLLL
Sbjct: 74  KDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVFTLIGMSQGVTLLL 133

Query: 121 VKS-LLFFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELIL 180
            KS LL F+Y++ YY+EY+VGFSGVLFAMKVVL SQ+E Y+ V+G+ VP+ +AAW ELIL
Sbjct: 134 AKSLLLLFDYDRAYYNEYAVGFSGVLFAMKVVLNSQAEDYSSVYGILVPTKYAAWAELIL 193

Query: 181 IQIVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPF 240
           +Q+  P  SFLGHLGGILAGI++L+LKG  SGSDP+ + +R V R+++ PL F   +   
Sbjct: 194 VQMFVPNASFLGHLGGILAGIIYLKLKGSYSGSDPVTMAVRGVSRLVTWPLRFLNGMVRS 253

Query: 241 RHRRIFGGGTVGRRQTSV---DTWRCRACTFDNSCLLPRCEMCGTDRQD----RAMPSRR 300
           R RRI G G VGR QT +     WRC++CT+DNS  L  CEMCG+ R             
Sbjct: 254 RRRRITGRGRVGRGQTGIAGPGIWRCQSCTYDNSGWLSACEMCGSGRARGNGWSLNQGPA 313

Query: 301 LSHRFDLTPEELRRRRLERF 312
           LS   DL  +ELRRRR+ERF
Sbjct: 314 LSSSNDLPLDELRRRRVERF 333

[Close]

BLAST of Carg25005 vs. ExPASy Swiss-Prot
Match: Q8TEB9 (Rhomboid-related protein 4 OS=Homo sapiens OX=9606 GN=RHBDD1 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.7e-25
Identity = 95/302 (31.46%), Postives = 142/302 (47.02%), Query Frame = 0


Query: 20  PITVGLLATNTLIHLRPGF-LRSVIPSIDDVWFNAYLILKYKDLKRFFLSPFYHVGDSHL 79
           P+T+  LA N    L P   L S   S++  +       + KD +R  LSP +H  D HL
Sbjct: 29  PVTLATLALNIWFFLNPQKPLYSSCLSVEKCY-------QQKDWQRLLLSPLHHADDWHL 88

Query: 80  AYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLVKSLLFFNYEKPYYHEYSV 139
            +NM S+LWKGI LE  +GS  FA ++    V++  + LLL  ++  F  E  +    +V
Sbjct: 89  YFNMASMLWKGINLERRLGSRWFAYVITAFSVLTGVVYLLLQFAVAEFMDEPDFKRSCAV 148

Query: 140 GFSGVLFAMKVVLGSQSE-SYTYVHGVRVPSSHAAWLELILIQIVSPGVSFLGHLGGILA 199
           GFSGVLFA+KV+        +  + G  VP+  A W+EL+ I + SPG SF GHL GIL 
Sbjct: 149 GFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLFSPGTSFAGHLAGILV 208

Query: 200 GILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFR------HRRIFGGGTVGR 259
           G+++ +         PL  ++ +     S  +G+  R   F       ++  +  G    
Sbjct: 209 GLMYTQ--------GPLKKIMEACAGGFSSSVGYPGRQYYFNSSGSSGYQDYYPHGRPDH 268

Query: 260 RQTSVDTWRCRACTFDNSCLLPRCEMCGT-DR-QDRAMPSRRLSHRFDLTPEELRRRRLE 312
            + +   +            L R       DR   R  P     + F L+PEE+RR+RL 
Sbjct: 269 YEEAPRNYDTYTAGLSEEEQLERALQASLWDRGNTRNSPP---PYGFHLSPEEMRRQRLH 312

[Close]

BLAST of Carg25005 vs. ExPASy Swiss-Prot
Match: Q8BHC7 (Rhomboid-related protein 4 OS=Mus musculus OX=10090 GN=Rhbdd1 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.2e-24
Identity = 92/308 (29.87%), Postives = 143/308 (46.43%), Query Frame = 0


Query: 20  PITVGLLATNTLIHLRP--GFLRSVIPSIDDVWFNAYLILKYKDLKRFFLSPFYHVGDSH 79
           P+T+  LA N    L P      S I S++  +       + KD +R  LSP +H  D H
Sbjct: 29  PVTLATLAVNVWFFLNPWKPLYHSCI-SVEKCY-------QQKDWQRLLLSPLHHGDDWH 88

Query: 80  LAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLVKSLLFFNYEKPYYHEYS 139
           L +NM+S+LWKG++LE  +GS  FA ++    +++  + LLL  ++     +  +    +
Sbjct: 89  LYFNMVSMLWKGVKLERRLGSRWFAYVIATFSLLTGVVYLLLQFTVAELLNQPDFKRNCA 148

Query: 140 VGFSGVLFAMKVVLGSQSE-SYTYVHGVRVPSSHAAWLELILIQIVSPGVSFLGHLGGIL 199
           VGFSGVLFA+KV+        +  + G  VP+  A W EL+ I   +PG SF GHL GIL
Sbjct: 149 VGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFACWAELVAIHFCTPGTSFAGHLAGIL 208

Query: 200 AGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRHRRIFGGGTVGRRQTSV 259
            G+++ +         PL  ++ +   I     G   + N F +      G  G +    
Sbjct: 209 VGLMYTQ--------GPLKKIMDTCAGIFISHAGPSGQQNHFNN-----AGPSGYQNHYA 268

Query: 260 DTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLS-------------HRFDLTPEEL 312
           D    R  T+D +         G   +++   + R S             + F L PEE+
Sbjct: 269 DG---RPVTYDATYRNYDVYTAGLSEEEQLERALRASIWDRGNTRNGPMPYGFRLPPEEM 312

[Close]

BLAST of Carg25005 vs. ExPASy Swiss-Prot
Match: Q5RBS4 (Rhomboid-related protein 4 OS=Pongo abelii OX=9601 GN=RHBDD1 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.8e-23
Identity = 68/184 (36.96%), Postives = 100/184 (54.35%), Query Frame = 0


Query: 20  PITVGLLATNTLIHLRPGF-LRSVIPSIDDVWFNAYLILKYKDLKRFFLSPFYHVGDSHL 79
           P+T+  LA N    L P   L S   S++  +       + +D +R  LSP +H  D HL
Sbjct: 29  PVTLATLALNIWFFLNPQKPLYSSCLSVEKCY-------QQRDWQRLLLSPLHHADDWHL 88

Query: 80  AYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLVKSLLFFNYEKPYYHEYSV 139
            +N  S+LWKGI LE  +GS  FA ++    V++  + LLL  ++  F  E  +    +V
Sbjct: 89  YFNTASVLWKGINLERRLGSRWFAYVITTFSVLTGVVYLLLQFAVAEFMDEPDFKRSCAV 148

Query: 140 GFSGVLFAMKVVLGSQSE-SYTYVHGVRVPSSHAAWLELILIQIVSPGVSFLGHLGGILA 199
           GFSGVLFA+KV+        +  + G  VP+  A W+EL+ I + SPG SF GH  GIL 
Sbjct: 149 GFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLFSPGTSFAGHQAGILV 205

Query: 200 GILF 202
           G+++
Sbjct: 209 GLMY 205

[Close]

BLAST of Carg25005 vs. ExPASy Swiss-Prot
Match: Q4V8F3 (Rhomboid-related protein 4 OS=Rattus norvegicus OX=10116 GN=Rhbdd1 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.9e-21
Identity = 65/185 (35.14%), Postives = 98/185 (52.97%), Query Frame = 0


Query: 20  PITVGLLATNTLIHLRP--GFLRSVIPSIDDVWFNAYLILKYKDLKRFFLSPFYHVGDSH 79
           P+T+  LA N    L P      S I S++  +       +  D +R  LSP +H  D H
Sbjct: 29  PVTLATLAVNVWFFLNPWKPLYHSCI-SVEKCY-------QQNDWQRLLLSPVHHGDDWH 88

Query: 80  LAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLVKSLLFFNYEKPYYHEYS 139
           L +NM+S+LWKG++LE  +GS  FA ++    +++  + LLL  +      +  +    +
Sbjct: 89  LYFNMVSMLWKGVKLEKRLGSRWFAYIIATFSLLTGVVYLLLQFASAELMNQPDFKRNCA 148

Query: 140 VGFSGVLFAMKVVLGSQSE-SYTYVHGVRVPSSHAAWLELILIQIVSPGVSFLGHLGGIL 199
           VGFSGVLFA+KV+        +  + G  VP+  A W EL  I   +PG SF GHL GIL
Sbjct: 149 VGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFACWAELAAIHFCTPGTSFAGHLAGIL 205

Query: 200 AGILF 202
            G+++
Sbjct: 209 VGLMY 205

[Close]

BLAST of Carg25005 vs. ExPASy TrEMBL
Match: A0A6J1EL30 (rhomboid-like protein 14, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111435540 PE=3 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 2.8e-174
Identity = 310/312 (99.36%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK 60
           MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK
Sbjct: 1   MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK 60

Query: 61  DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLV 120
           DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVG LLVMSQGITLLLV
Sbjct: 61  DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGALLVMSQGITLLLV 120

Query: 121 KSLLFFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ 180
           KSLLFFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ
Sbjct: 121 KSLLFFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ 180

Query: 181 IVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRH 240
           IVSPGVSFLGHLGGILAGILFLRLKGMN GSDPLAVLIRSVGRILSRPLGFFCRLNPFRH
Sbjct: 181 IVSPGVSFLGHLGGILAGILFLRLKGMNLGSDPLAVLIRSVGRILSRPLGFFCRLNPFRH 240

Query: 241 RRIFGGGTVGRRQTSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP 300
           RRIFGGGTVGRRQTSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP
Sbjct: 241 RRIFGGGTVGRRQTSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP 300

Query: 301 EELRRRRLERFG 313
           EELRRRRLERFG
Sbjct: 301 EELRRRRLERFG 312

[Close]

BLAST of Carg25005 vs. ExPASy TrEMBL
Match: A0A6J1HXX5 (rhomboid-like protein 14, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111467237 PE=3 SV=1)

HSP 1 Score: 618.6 bits (1594), Expect = 1.4e-173
Identity = 308/312 (98.72%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK 60
           MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK
Sbjct: 1   MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK 60

Query: 61  DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLV 120
           DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVG LLVMSQGITLLLV
Sbjct: 61  DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGALLVMSQGITLLLV 120

Query: 121 KSLLFFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ 180
           KSLLFFNYE+PYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ
Sbjct: 121 KSLLFFNYERPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQ 180

Query: 181 IVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRH 240
           IVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRH
Sbjct: 181 IVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRH 240

Query: 241 RRIFGGGTVGRRQTSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP 300
            RIFGGGTVGRRQTSVDTWRC+ACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP
Sbjct: 241 HRIFGGGTVGRRQTSVDTWRCQACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDLTP 300

Query: 301 EELRRRRLERFG 313
           EELRRRRLERFG
Sbjct: 301 EELRRRRLERFG 312

[Close]

BLAST of Carg25005 vs. ExPASy TrEMBL
Match: A0A5A7SVC3 (Rhomboid-like protein 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001640 PE=3 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.4e-141
Identity = 257/314 (81.85%), Postives = 282/314 (89.81%), Query Frame = 0


Query: 1   MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK 60
           MLPLLAYQVV+QY RLQG PIT+GLLA+NTLIHLRP FL  +IPSID+VWFNA+LILK+K
Sbjct: 1   MLPLLAYQVVSQYYRLQGNPITLGLLASNTLIHLRPNFLHHIIPSIDEVWFNAHLILKHK 60

Query: 61  DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLV 120
           DLKRF LSPFYHVGD HL YNMISLLWKG QLE+SMGS +FASMVG LLVMSQGITLLL+
Sbjct: 61  DLKRFLLSPFYHVGDPHLVYNMISLLWKGTQLETSMGSIEFASMVGALLVMSQGITLLLI 120

Query: 121 KSLL-FFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILI 180
           KSLL FFNY +PYY+EYSVGFSGVLFA+KVVLGS++ESYTY+HG+RVPSSHAAWLELILI
Sbjct: 121 KSLLIFFNYGRPYYYEYSVGFSGVLFALKVVLGSETESYTYIHGLRVPSSHAAWLELILI 180

Query: 181 QIVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFR 240
           Q+VSPGVSFLGHLGGILAG+LFLRLKG NSGSDPL +LIRSVGRILSRPLGFF RLNPFR
Sbjct: 181 QMVSPGVSFLGHLGGILAGLLFLRLKGTNSGSDPLTLLIRSVGRILSRPLGFFSRLNPFR 240

Query: 241 HRRIFGGGTVGRRQ-TSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDL 300
            RRIFGGGTVG R  TS+ TWRCRACTFDNS LL  CEMCGTDRQD  + S +LS + D 
Sbjct: 241 QRRIFGGGTVGSRPVTSIGTWRCRACTFDNSGLLSTCEMCGTDRQDGVLHSNQLSSQLDF 300

Query: 301 TPEELRRRRLERFG 313
           T EE+RRRRLERFG
Sbjct: 301 TREEMRRRRLERFG 314

[Close]

BLAST of Carg25005 vs. ExPASy TrEMBL
Match: A0A1S3B4I1 (rhomboid-like protein 14, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486069 PE=3 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.4e-141
Identity = 257/314 (81.85%), Postives = 282/314 (89.81%), Query Frame = 0


Query: 1   MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK 60
           MLPLLAYQVV+QY RLQG PIT+GLLA+NTLIHLRP FL  +IPSID+VWFNA+LILK+K
Sbjct: 1   MLPLLAYQVVSQYYRLQGNPITLGLLASNTLIHLRPNFLHHIIPSIDEVWFNAHLILKHK 60

Query: 61  DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLV 120
           DLKRF LSPFYHVGD HL YNMISLLWKG QLE+SMGS +FASMVG LLVMSQGITLLL+
Sbjct: 61  DLKRFLLSPFYHVGDPHLVYNMISLLWKGTQLETSMGSIEFASMVGALLVMSQGITLLLI 120

Query: 121 KSLL-FFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILI 180
           KSLL FFNY +PYY+EYSVGFSGVLFA+KVVLGS++ESYTY+HG+RVPSSHAAWLELILI
Sbjct: 121 KSLLIFFNYGRPYYYEYSVGFSGVLFALKVVLGSETESYTYIHGLRVPSSHAAWLELILI 180

Query: 181 QIVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFR 240
           Q+VSPGVSFLGHLGGILAG+LFLRLKG NSGSDPL +LIRSVGRILSRPLGFF RLNPFR
Sbjct: 181 QMVSPGVSFLGHLGGILAGLLFLRLKGTNSGSDPLTLLIRSVGRILSRPLGFFSRLNPFR 240

Query: 241 HRRIFGGGTVGRRQ-TSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDL 300
            RRIFGGGTVG R  TS+ TWRCRACTFDNS LL  CEMCGTDRQD  + S +LS + D 
Sbjct: 241 QRRIFGGGTVGSRPVTSIGTWRCRACTFDNSGLLSTCEMCGTDRQDGVLHSNQLSSQLDF 300

Query: 301 TPEELRRRRLERFG 313
           T EE+RRRRLERFG
Sbjct: 301 TREEMRRRRLERFG 314

[Close]

BLAST of Carg25005 vs. ExPASy TrEMBL
Match: A0A0A0L173 (RanBP2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G506850 PE=3 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 2.7e-140
Identity = 255/314 (81.21%), Postives = 281/314 (89.49%), Query Frame = 0


Query: 1   MLPLLAYQVVTQYNRLQGKPITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKYK 60
           MLPLLAYQVV+QY RLQG PIT+GLLA+NTLIHLRP FL  +IPSID+VWFNA+LI K+K
Sbjct: 1   MLPLLAYQVVSQYYRLQGNPITLGLLASNTLIHLRPNFLHHIIPSIDEVWFNAHLIFKHK 60

Query: 61  DLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLV 120
           DLKRF LSPFYHVGD HL YNMISLLWKG QLE+SMGS +FASMVG LL+MSQGITLLL+
Sbjct: 61  DLKRFLLSPFYHVGDPHLVYNMISLLWKGTQLETSMGSIEFASMVGALLIMSQGITLLLI 120

Query: 121 KSLL-FFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILI 180
           KSLL FFNY +PYY+EYSVGFSGVLFAMKVVLGS+++SYTYVHG+RVPSSHAAWLELILI
Sbjct: 121 KSLLIFFNYGRPYYYEYSVGFSGVLFAMKVVLGSETDSYTYVHGLRVPSSHAAWLELILI 180

Query: 181 QIVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFR 240
           Q+VSPGVSFLGHLGGILAG+LFLRLKG NSGSDPL +LIRSVGRILSR  GFFCRLNPFR
Sbjct: 181 QMVSPGVSFLGHLGGILAGLLFLRLKGTNSGSDPLTLLIRSVGRILSRSYGFFCRLNPFR 240

Query: 241 HRRIFGGGTVGRRQ-TSVDTWRCRACTFDNSCLLPRCEMCGTDRQDRAMPSRRLSHRFDL 300
            RRIFGGGTVG R  TS+ TWRC+ACTFDNS LL  CEMCGTDRQD  + S +LS + DL
Sbjct: 241 QRRIFGGGTVGSRPVTSIGTWRCQACTFDNSGLLSACEMCGTDRQDGVLHSNQLSSQLDL 300

Query: 301 TPEELRRRRLERFG 313
           T EE+RRRRLERFG
Sbjct: 301 TWEEMRRRRLERFG 314

[Close]

BLAST of Carg25005 vs. TAIR 10
Match: AT3G17611.1 (RHOMBOID-like protein 14 )

HSP 1 Score: 349.0 bits (894), Expect = 4.0e-96
Identity = 186/320 (58.13%), Postives = 232/320 (72.50%), Query Frame = 0


Query: 1   MLPLLAYQVVTQYNRLQGK-PITVGLLATNTLIHLRPGFLRSVIPSIDDVWFNAYLILKY 60
           MLPLLA   V +Y RL  K P+T  LLA NTL++LRP F+  VIP I +VWFN +LI K+
Sbjct: 14  MLPLLALSAVAEYYRLPWKPPVTASLLAANTLVYLRPAFIDPVIPHISEVWFNPHLIFKH 73

Query: 61  KDLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLL 120
           KDLKR FLS FYHV + HL YNM+SLLWKGI+LE+SMGS++FASMV  L+ MSQG+TLLL
Sbjct: 74  KDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVFTLIGMSQGVTLLL 133

Query: 121 VKS-LLFFNYEKPYYHEYSVGFSGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELIL 180
            KS LL F+Y++ YY+EY+VGFSGVLFAMKVVL SQ+E Y+ V+G+ VP+ +AAW ELIL
Sbjct: 134 AKSLLLLFDYDRAYYNEYAVGFSGVLFAMKVVLNSQAEDYSSVYGILVPTKYAAWAELIL 193

Query: 181 IQIVSPGVSFLGHLGGILAGILFLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPF 240
           +Q+  P  SFLGHLGGILAGI++L+LKG  SGSDP+ + +R V R+++ PL F   +   
Sbjct: 194 VQMFVPNASFLGHLGGILAGIIYLKLKGSYSGSDPVTMAVRGVSRLVTWPLRFLNGMVRS 253

Query: 241 RHRRIFGGGTVGRRQTSV---DTWRCRACTFDNSCLLPRCEMCGTDRQD----RAMPSRR 300
           R RRI G G VGR QT +     WRC++CT+DNS  L  CEMCG+ R             
Sbjct: 254 RRRRITGRGRVGRGQTGIAGPGIWRCQSCTYDNSGWLSACEMCGSGRARGNGWSLNQGPA 313

Query: 301 LSHRFDLTPEELRRRRLERF 312
           LS   DL  +ELRRRR+ERF
Sbjct: 314 LSSSNDLPLDELRRRRVERF 333

[Close]

BLAST of Carg25005 vs. TAIR 10
Match: AT3G17611.2 (RHOMBOID-like protein 14 )

HSP 1 Score: 250.0 bits (637), Expect = 2.5e-66
Identity = 136/238 (57.14%), Postives = 173/238 (72.69%), Query Frame = 0


Query: 82  MISLLWKGIQLESSMGSTKFASMVGVLLVMSQGITLLLVKS-LLFFNYEKPYYHEYSVGF 141
           M+SLLWKGI+LE+SMGS++FASMV  L+ MSQG+TLLL KS LL F+Y++ YY+EY+VGF
Sbjct: 1   MMSLLWKGIKLETSMGSSEFASMVFTLIGMSQGVTLLLAKSLLLLFDYDRAYYNEYAVGF 60

Query: 142 SGVLFAMKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQIVSPGVSFLGHLGGILAGIL 201
           SGVLFAMKVVL SQ+E Y+ V+G+ VP+ +AAW ELIL+Q+  P  SFLGHLGGILAGI+
Sbjct: 61  SGVLFAMKVVLNSQAEDYSSVYGILVPTKYAAWAELILVQMFVPNASFLGHLGGILAGII 120

Query: 202 FLRLKGMNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRHRRIFGGGTVGRRQTSV---D 261
           +L+LKG  SGSDP+ + +R V R+++ PL F   +   R RRI G G VGR QT +    
Sbjct: 121 YLKLKGSYSGSDPVTMAVRGVSRLVTWPLRFLNGMVRSRRRRITGRGRVGRGQTGIAGPG 180

Query: 262 TWRCRACTFDNSCLLPRCEMCGTDRQD----RAMPSRRLSHRFDLTPEELRRRRLERF 312
            WRC++CT+DNS  L  CEMCG+ R             LS   DL  +ELRRRR+ERF
Sbjct: 181 IWRCQSCTYDNSGWLSACEMCGSGRARGNGWSLNQGPALSSSNDLPLDELRRRRVERF 238

[Close]

BLAST of Carg25005 vs. TAIR 10
Match: AT3G17611.3 (RHOMBOID-like protein 14 )

HSP 1 Score: 164.1 bits (414), Expect = 1.8e-40
Identity = 89/172 (51.74%), Postives = 114/172 (66.28%), Query Frame = 0


Query: 147 MKVVLGSQSESYTYVHGVRVPSSHAAWLELILIQIVSPGVSFLGHLGGILAGILFLRLKG 206
           MKVVL SQ+E Y+ V+G+ VP+ +AAW ELIL+Q+  P  SFLGHLGGILAGI++L+LKG
Sbjct: 1   MKVVLNSQAEDYSSVYGILVPTKYAAWAELILVQMFVPNASFLGHLGGILAGIIYLKLKG 60

Query: 207 MNSGSDPLAVLIRSVGRILSRPLGFFCRLNPFRHRRIFGGGTVGRRQTSV---DTWRCRA 266
             SGSDP+ + +R V R+++ PL F   +   R RRI G G VGR QT +     WRC++
Sbjct: 61  SYSGSDPVTMAVRGVSRLVTWPLRFLNGMVRSRRRRITGRGRVGRGQTGIAGPGIWRCQS 120

Query: 267 CTFDNSCLLPRCEMCGTDRQD----RAMPSRRLSHRFDLTPEELRRRRLERF 312
           CT+DNS  L  CEMCG+ R             LS   DL  +ELRRRR+ERF
Sbjct: 121 CTYDNSGWLSACEMCGSGRARGNGWSLNQGPALSSSNDLPLDELRRRRVERF 172

[Close]

BLAST of Carg25005 vs. TAIR 10
Match: AT3G58460.1 (RHOMBOID-like protein 15 )

HSP 1 Score: 73.6 bits (179), Expect = 3.2e-13
Identity = 54/159 (33.96%), Postives = 85/159 (53.46%), Query Frame = 0


Query: 48  DVWFNAYLILKYKDLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGV 107
           +V F    I+    + RF+ +  +H    H+ +NM++L+  G +LE  MGS +   +  V
Sbjct: 50  EVCFLPSAIISRFQVYRFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLT-V 109

Query: 108 LLVMSQGITLLLVKSLLFFNYEKPYYH---EYSVGFSGVLFAMKVVLGSQS--ESYTYVH 167
           LL  +  +  LL+ SL  +N    Y H   E ++GFSG+LF+M V+  S S   S +   
Sbjct: 110 LLATTNAVLHLLIASLAGYNPFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSRSVFG 169

Query: 168 GVRVPSSHAAWLELILIQIVSPGVSFLGHLGGILAGILF 202
              VP+    W+ LI+ Q++   VS LGHL GIL+G  +
Sbjct: 170 LFNVPAKLYPWILLIVFQLLMTNVSLLGHLCGILSGFSY 207

[Close]

BLAST of Carg25005 vs. TAIR 10
Match: AT3G58460.2 (RHOMBOID-like protein 15 )

HSP 1 Score: 73.6 bits (179), Expect = 3.2e-13
Identity = 54/159 (33.96%), Postives = 85/159 (53.46%), Query Frame = 0


Query: 48  DVWFNAYLILKYKDLKRFFLSPFYHVGDSHLAYNMISLLWKGIQLESSMGSTKFASMVGV 107
           +V F    I+    + RF+ +  +H    H+ +NM++L+  G +LE  MGS +   +  V
Sbjct: 73  EVCFLPSAIISRFQVYRFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLT-V 132

Query: 108 LLVMSQGITLLLVKSLLFFNYEKPYYH---EYSVGFSGVLFAMKVVLGSQS--ESYTYVH 167
           LL  +  +  LL+ SL  +N    Y H   E ++GFSG+LF+M V+  S S   S +   
Sbjct: 133 LLATTNAVLHLLIASLAGYNPFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSRSVFG 192

Query: 168 GVRVPSSHAAWLELILIQIVSPGVSFLGHLGGILAGILF 202
              VP+    W+ LI+ Q++   VS LGHL GIL+G  +
Sbjct: 193 LFNVPAKLYPWILLIVFQLLMTNVSLLGHLCGILSGFSY 230

The following BLAST results are available for this feature:

BLAST of Carg25005 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603179.1	4.1e-175	100.00	Rhomboid-like protein 14, mitochondrial, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022928711.1	5.9e-174	99.36	rhomboid-like protein 14, mitochondrial [Cucurbita moschata] >XP_022928712.1 rho...	[more]
XP_022967849.1	2.9e-173	98.72	rhomboid-like protein 14, mitochondrial [Cucurbita maxima] >XP_022967850.1 rhomb...	[more]
XP_023543363.1	1.2e-171	97.76	rhomboid-like protein 14, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_038881196.1	2.2e-144	83.39	rhomboid-like protein 14, mitochondrial [Benincasa hispida]	[more]

BLAST of Carg25005 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXW0	5.6e-95	58.13	Rhomboid-like protein 14, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL14...	[more]
Q8TEB9	4.7e-25	31.46	Rhomboid-related protein 4 OS=Homo sapiens OX=9606 GN=RHBDD1 PE=1 SV=1	[more]
Q8BHC7	5.2e-24	29.87	Rhomboid-related protein 4 OS=Mus musculus OX=10090 GN=Rhbdd1 PE=1 SV=1	[more]
Q5RBS4	5.8e-23	36.96	Rhomboid-related protein 4 OS=Pongo abelii OX=9601 GN=RHBDD1 PE=2 SV=1	[more]
Q4V8F3	1.9e-21	35.14	Rhomboid-related protein 4 OS=Rattus norvegicus OX=10116 GN=Rhbdd1 PE=2 SV=1	[more]

BLAST of Carg25005 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EL30	2.8e-174	99.36	rhomboid-like protein 14, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1HXX5	1.4e-173	98.72	rhomboid-like protein 14, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111467...	[more]
A0A5A7SVC3	2.4e-141	81.85	Rhomboid-like protein 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B4I1	2.4e-141	81.85	rhomboid-like protein 14, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486069 ...	[more]
A0A0A0L173	2.7e-140	81.21	RanBP2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G506850...	[more]

BLAST of Carg25005 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17611.1	4.0e-96	58.13	RHOMBOID-like protein 14	[more]
AT3G17611.2	2.5e-66	57.14	RHOMBOID-like protein 14	[more]
AT3G17611.3	1.8e-40	51.74	RHOMBOID-like protein 14	[more]
AT3G58460.1	3.2e-13	33.96	RHOMBOID-like protein 15	[more]
AT3G58460.2	3.2e-13	33.96	RHOMBOID-like protein 15	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 13..208 e-value: 1.1E-22 score: 82.6
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 20..203
None	No IPR available	GENE3D	2.30.30.380		coord: 253..310 e-value: 2.4E-8 score: 35.7
None	No IPR available	PANTHER	PTHR43066	RHOMBOID-RELATED PROTEIN	coord: 1..310
None	No IPR available	PANTHER	PTHR43066:SF1	RHOMBOID PROTEIN 2	coord: 1..310
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 59..204 e-value: 3.4E-20 score: 72.6
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 259..278
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 255..284 score: 8.264401
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 257..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25005-RA	Carg25005-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004252	serine-type endopeptidase activity