Carg24978 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg24978
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionethylene-responsive transcription factor ERF020
LocationCarg_Chr15: 179286 .. 179741 (+)
RNA-Seq ExpressionCarg24978
SyntenyCarg24978
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAATTCCACCAGTTCCTGTGACACGAAGAAATACAAGGGCGTACGGCGGCGTAAGTGGGGGAAGTGGGTGTCGGAGATCCGAGTTCCGGGCAGCCAAGAACGGCTGTGGTTAGGTTCTTACTCGTCGCCGGAGGCCGCCGCCGTGGCTCACGATGTCGCATATTATTGCCTGAGAAGACCCTCAAACCTGGACCACCTCAACTTCCCGCCGACGGTGCTGCCCTTGACCAACCACCTTCTTATCCGAGACGACATGTCGCCTGGCTCCATTCAGAAGGCAGCCTCCGACGCCGCCATGGCTGTCGACGCACAGTATATATGCAACAACTTGCCTGACCGGGGCAGCAGCGGCTGGGCAGGGACATTTCAGAACTATACGGCGCCAAATGATCAAGATCTTTCCGTTGAAGCCAGGGTCAGCCAGGCTTTCCAACTTTCGATGGTTTAG

mRNA sequence

ATGGCTTCCAATTCCACCAGTTCCTGTGACACGAAGAAATACAAGGGCGTACGGCGGCGTAAGTGGGGGAAGTGGGTGTCGGAGATCCGAGTTCCGGGCAGCCAAGAACGGCTGTGGTTAGGTTCTTACTCGTCGCCGGAGGCCGCCGCCGTGGCTCACGATGTCGCATATTATTGCCTGAGAAGACCCTCAAACCTGGACCACCTCAACTTCCCGCCGACGGTGCTGCCCTTGACCAACCACCTTCTTATCCGAGACGACATGTCGCCTGGCTCCATTCAGAAGGCAGCCTCCGACGCCGCCATGGCTGTCGACGCACAGTATATATGCAACAACTTGCCTGACCGGGGCAGCAGCGGCTGGGCAGGGACATTTCAGAACTATACGGCGCCAAATGATCAAGATCTTTCCGTTGAAGCCAGGGTCAGCCAGGCTTTCCAACTTTCGATGGTTTAG

Coding sequence (CDS)

ATGGCTTCCAATTCCACCAGTTCCTGTGACACGAAGAAATACAAGGGCGTACGGCGGCGTAAGTGGGGGAAGTGGGTGTCGGAGATCCGAGTTCCGGGCAGCCAAGAACGGCTGTGGTTAGGTTCTTACTCGTCGCCGGAGGCCGCCGCCGTGGCTCACGATGTCGCATATTATTGCCTGAGAAGACCCTCAAACCTGGACCACCTCAACTTCCCGCCGACGGTGCTGCCCTTGACCAACCACCTTCTTATCCGAGACGACATGTCGCCTGGCTCCATTCAGAAGGCAGCCTCCGACGCCGCCATGGCTGTCGACGCACAGTATATATGCAACAACTTGCCTGACCGGGGCAGCAGCGGCTGGGCAGGGACATTTCAGAACTATACGGCGCCAAATGATCAAGATCTTTCCGTTGAAGCCAGGGTCAGCCAGGCTTTCCAACTTTCGATGGTTTAG

Protein sequence

MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSGWAGTFQNYTAPNDQDLSVEARVSQAFQLSMV
Homology
[Close]
BLAST of Carg24978 vs. NCBI nr
Match: KAG7015884.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 311.2 bits (796), Expect = 4.8e-81
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60
           MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL
Sbjct: 1   MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60

Query: 61  RRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSG 120
           RRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSG
Sbjct: 61  RRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSG 120

Query: 121 WAGTFQNYTAPNDQDLSVEARVSQAFQLSMV 152
           WAGTFQNYTAPNDQDLSVEARVSQAFQLSMV
Sbjct: 121 WAGTFQNYTAPNDQDLSVEARVSQAFQLSMV 151

[Close]
BLAST of Carg24978 vs. NCBI nr
Match: XP_022939510.1 (ethylene-responsive transcription factor ERF020 [Cucurbita moschata] >XP_023551488.1 ethylene-responsive transcription factor ERF020 [Cucurbita pepo subsp. pepo] >KAG6578308.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285.4 bits (729), Expect = 2.8e-73
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60
           MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL
Sbjct: 1   MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60

Query: 61  RRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSG 120
           RRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSG
Sbjct: 61  RRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSG 120

Query: 121 WAGTFQNYTAPNDQDLSVE 140
            AGTFQNYTAPNDQDLSVE
Sbjct: 121 GAGTFQNYTAPNDQDLSVE 139

[Close]
BLAST of Carg24978 vs. NCBI nr
Match: XP_022993221.1 (ethylene-responsive transcription factor ERF020 [Cucurbita maxima])

HSP 1 Score: 280.8 bits (717), Expect = 7.0e-72
Identity = 135/139 (97.12%), Postives = 137/139 (98.56%), Query Frame = 0 

Query: 1   MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60
           MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL
Sbjct: 1   MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60

Query: 61  RRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSG 120
           RRPSNLDHLNFPPTVLPLTNHLL+RDD+SPGSIQKAASDAAMAVDAQYICNNLPDR SSG
Sbjct: 61  RRPSNLDHLNFPPTVLPLTNHLLVRDDVSPGSIQKAASDAAMAVDAQYICNNLPDRDSSG 120

Query: 121 WAGTFQNYTAPNDQDLSVE 140
            AGTFQNYTAPNDQDLSVE
Sbjct: 121 GAGTFQNYTAPNDQDLSVE 139

[Close]
BLAST of Carg24978 vs. NCBI nr
Match: XP_038886239.1 (ethylene-responsive transcription factor ERF020 [Benincasa hispida])

HSP 1 Score: 249.6 bits (636), Expect = 1.7e-62
Identity = 123/139 (88.49%), Postives = 131/139 (94.24%), Query Frame = 0 

Query: 1   MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60
           MAS+S S  +TKKYKGVRRRKWGKWVSEIRVPG+QERLWLGSYSSPEAAAVAHDVAYYCL
Sbjct: 1   MASSSNSLGETKKYKGVRRRKWGKWVSEIRVPGTQERLWLGSYSSPEAAAVAHDVAYYCL 60

Query: 61  RRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSG 120
           RRPSNLDHLNFPP VLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICN+L DRGS+G
Sbjct: 61  RRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSLADRGSTG 120

Query: 121 WAGTFQNYTAPNDQDLSVE 140
            AG + NYTAP+DQDLSV+
Sbjct: 121 PAGDY-NYTAPDDQDLSVQ 138

[Close]
BLAST of Carg24978 vs. NCBI nr
Match: KAG7033420.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 242.7 bits (618), Expect = 2.1e-60
Identity = 122/141 (86.52%), Postives = 127/141 (90.07%), Query Frame = 0 

Query: 1   MASNS-TSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYC 60
           MASNS TS  DTKKYKGVRRRKWGKWVSEIRVPG+QER+WLGSYSSPEAAAVAHDVAYYC
Sbjct: 1   MASNSNTSPPDTKKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYC 60

Query: 61  LRRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSS 120
           LRRPSNLDHLNFPP VLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICN+ PDRGSS
Sbjct: 61  LRRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSSPDRGSS 120

Query: 121 GWAGTF-----QNYTAPNDQD 136
           G  G F     ++YTA NDQD
Sbjct: 121 GGTGAFHGSGYESYTAMNDQD 141

[Close]
BLAST of Carg24978 vs. ExPASy Swiss-Prot
Match: Q9C9I8 (Ethylene-responsive transcription factor ERF020 OS=Arabidopsis thaliana OX=3702 GN=ERF020 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.1e-30
Identity = 70/113 (61.95%), Postives = 82/113 (72.57%), Query Frame = 0 

Query: 1   MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60
           M S  T   D  KYKG+RRRKWGKWVSEIRVPG+++RLWLGS+S+ E AAVAHDVA+YCL
Sbjct: 1   MDSRDTGETDQSKYKGIRRRKWGKWVSEIRVPGTRQRLWLGSFSTAEGAAVAHDVAFYCL 60

Query: 61  RRPSNLD--HLNFPPTVLPLTNHLL---IRDDMSPGSIQKAASDAAMAVDAQY 109
            RPS+LD    NFP        HLL   +  ++SP SIQKAASDA MAVDA +
Sbjct: 61  HRPSSLDDESFNFP--------HLLTTSLASNISPKSIQKAASDAGMAVDAGF 105

[Close]
BLAST of Carg24978 vs. ExPASy Swiss-Prot
Match: O80542 (Ethylene-responsive transcription factor ERF019 OS=Arabidopsis thaliana OX=3702 GN=ERF019 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.2e-27
Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 0 

Query: 13  KYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNLDHLNFP 72
           KYKG+RRRKWGKWVSEIRVPG+++RLWLGS+S+ E AAVAHDVA++CL +P +L+ LNFP
Sbjct: 13  KYKGIRRRKWGKWVSEIRVPGTRDRLWLGSFSTAEGAAVAHDVAFFCLHQPDSLESLNFP 72

Query: 73  PTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSGWAGTFQN 128
             + P    L+ R   SP SIQ+AAS+A MA+DA  + +   + G       ++N
Sbjct: 73  HLLNP---SLVSR--TSPRSIQQAASNAGMAIDAGIVHSTSVNSGCGDTTTYYEN 122

[Close]
BLAST of Carg24978 vs. ExPASy Swiss-Prot
Match: Q9LPE8 (Ethylene-responsive transcription factor ERF014 OS=Arabidopsis thaliana OX=3702 GN=ERF014 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-19
Identity = 54/105 (51.43%), Postives = 71/105 (67.62%), Query Frame = 0 

Query: 2   ASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLR 61
           +S S+SS   KKYKGVR R WG WVSEIR P  + R+WLGSYS+ EAAA A+D A  CL 
Sbjct: 23  SSTSSSSIRMKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCL- 82

Query: 62  RPSNLDHLNFP---PTVLPLTNHLLIRDDMSPGSIQKAASDAAMA 104
           + S+ ++LNFP    ++  + N+    +DMSP SIQ+ A+ AA A
Sbjct: 83  KGSSANNLNFPEISTSLYHIINNGDNNNDMSPKSIQRVAAAAAAA 126

[Close]
BLAST of Carg24978 vs. ExPASy Swiss-Prot
Match: Q84QC2 (Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana OX=3702 GN=ERF017 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.4e-19
Identity = 64/153 (41.83%), Postives = 85/153 (55.56%), Query Frame = 0 

Query: 6   TSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSN 65
           +SS    KYKGVR+RKWGKWVSEIR+P S+ER+WLGSY +PE AA A D A YCLR   N
Sbjct: 4   SSSSMQSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLR--GN 63

Query: 66  LDHLNFP--PTVLPLTNHL--------------LIRDDMSPGS---IQKAASDAAMAVDA 125
               NFP  P V+    +L                 DD S G+   I++ ++  +M VD+
Sbjct: 64  NAKFNFPDNPPVISGGRNLSRSEIREAAARFANSAEDDSSGGAGYEIRQESASTSMDVDS 123

Query: 126 QYICNNLPDRGSSGWAGTFQNYTAPNDQDLSVE 140
           +++ + LP  GS  +A  F  +  P   D S E
Sbjct: 124 EFL-SMLPTVGSGNFASEFGLF--PGFDDFSDE 151

[Close]
BLAST of Carg24978 vs. ExPASy Swiss-Prot
Match: Q9SFE4 (Ethylene-responsive transcription factor ERF012 OS=Arabidopsis thaliana OX=3702 GN=ERF012 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.7e-18
Identity = 56/112 (50.00%), Postives = 73/112 (65.18%), Query Frame = 0 

Query: 2   ASNSTSSCDT-------KKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHD 61
           +S+S+SSC         KKYKGVR R WG WVSEIR P  + R+WLGSYS+ EAAA A+D
Sbjct: 31  SSSSSSSCKNKNKKSKIKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYD 90

Query: 62  VAYYCLRRPSNLDHLNFPPTVLPLTNHLL--IRDD---MSPGSIQKAASDAA 102
           VA  CL+ P    +LNFP +    ++HLL  + D+   +SP SIQ+ A+ AA
Sbjct: 91  VALLCLKGPQ--ANLNFPTS--SSSHHLLDNLLDENTLLSPKSIQRVAAQAA 138

[Close]
BLAST of Carg24978 vs. ExPASy TrEMBL
Match: A0A6J1FMW6 (ethylene-responsive transcription factor ERF020 OS=Cucurbita moschata OX=3662 GN=LOC111445395 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.4e-73
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60
           MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL
Sbjct: 1   MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60

Query: 61  RRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSG 120
           RRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSG
Sbjct: 61  RRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSG 120

Query: 121 WAGTFQNYTAPNDQDLSVE 140
            AGTFQNYTAPNDQDLSVE
Sbjct: 121 GAGTFQNYTAPNDQDLSVE 139

[Close]
BLAST of Carg24978 vs. ExPASy TrEMBL
Match: A0A6J1JVQ7 (ethylene-responsive transcription factor ERF020 OS=Cucurbita maxima OX=3661 GN=LOC111489308 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.4e-72
Identity = 135/139 (97.12%), Postives = 137/139 (98.56%), Query Frame = 0 

Query: 1   MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60
           MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL
Sbjct: 1   MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60

Query: 61  RRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSG 120
           RRPSNLDHLNFPPTVLPLTNHLL+RDD+SPGSIQKAASDAAMAVDAQYICNNLPDR SSG
Sbjct: 61  RRPSNLDHLNFPPTVLPLTNHLLVRDDVSPGSIQKAASDAAMAVDAQYICNNLPDRDSSG 120

Query: 121 WAGTFQNYTAPNDQDLSVE 140
            AGTFQNYTAPNDQDLSVE
Sbjct: 121 GAGTFQNYTAPNDQDLSVE 139

[Close]
BLAST of Carg24978 vs. ExPASy TrEMBL
Match: A0A6J1HG65 (ethylene-responsive transcription factor ERF020-like OS=Cucurbita moschata OX=3662 GN=LOC111463781 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 8.6e-60
Identity = 120/141 (85.11%), Postives = 126/141 (89.36%), Query Frame = 0 

Query: 1   MASNS-TSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYC 60
           MASNS T   +TKKYKGVRRRKWGKWVSEIRVPG+QER+WLGSYSSPEAAAVAHDVAYYC
Sbjct: 1   MASNSNTGPPETKKYKGVRRRKWGKWVSEIRVPGTQERMWLGSYSSPEAAAVAHDVAYYC 60

Query: 61  LRRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSS 120
           LRRPSNLDHLNFPP VLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICN+ PDRGSS
Sbjct: 61  LRRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNSSPDRGSS 120

Query: 121 GWAGTF-----QNYTAPNDQD 136
           G  G F     ++YTA NDQD
Sbjct: 121 GGTGAFHGSGYESYTAMNDQD 141

[Close]
BLAST of Carg24978 vs. ExPASy TrEMBL
Match: A0A5A7T282 (Ethylene-responsive transcription factor ERF019 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G00510 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.3e-59
Identity = 120/145 (82.76%), Postives = 129/145 (88.97%), Query Frame = 0 

Query: 1   MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60
           MAS+S S  + KK+KGVR+RKWGKWVSEIRVPGSQ+RLWLGSYSSPEAAAVAHDVAYYCL
Sbjct: 1   MASSSNSLGEIKKFKGVRQRKWGKWVSEIRVPGSQDRLWLGSYSSPEAAAVAHDVAYYCL 60

Query: 61  RRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSG 120
           RRPSNLDHLNFPP VLPLTNHLLIRDDMSPGSIQ+AASDAAMAVDAQYICN+L DRGSSG
Sbjct: 61  RRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQRAASDAAMAVDAQYICNSLADRGSSG 120

Query: 121 WAGTFQ-----NYTA-PNDQDLSVE 140
            AG FQ      YTA  NDQDLS++
Sbjct: 121 RAGAFQASGDDQYTAFNNDQDLSIQ 145

[Close]
BLAST of Carg24978 vs. ExPASy TrEMBL
Match: A0A1S3B2T2 (ethylene-responsive transcription factor ERF019 OS=Cucumis melo OX=3656 GN=LOC103485382 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.3e-59
Identity = 120/145 (82.76%), Postives = 129/145 (88.97%), Query Frame = 0 

Query: 1   MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60
           MAS+S S  + KK+KGVR+RKWGKWVSEIRVPGSQ+RLWLGSYSSPEAAAVAHDVAYYCL
Sbjct: 1   MASSSNSLGEIKKFKGVRQRKWGKWVSEIRVPGSQDRLWLGSYSSPEAAAVAHDVAYYCL 60

Query: 61  RRPSNLDHLNFPPTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSG 120
           RRPSNLDHLNFPP VLPLTNHLLIRDDMSPGSIQ+AASDAAMAVDAQYICN+L DRGSSG
Sbjct: 61  RRPSNLDHLNFPPMVLPLTNHLLIRDDMSPGSIQRAASDAAMAVDAQYICNSLADRGSSG 120

Query: 121 WAGTFQ-----NYTA-PNDQDLSVE 140
            AG FQ      YTA  NDQDLS++
Sbjct: 121 RAGAFQASGDDQYTAFNNDQDLSIQ 145

[Close]
BLAST of Carg24978 vs. TAIR 10
Match: AT1G71520.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 2.2e-31
Identity = 70/113 (61.95%), Postives = 82/113 (72.57%), Query Frame = 0 

Query: 1   MASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCL 60
           M S  T   D  KYKG+RRRKWGKWVSEIRVPG+++RLWLGS+S+ E AAVAHDVA+YCL
Sbjct: 1   MDSRDTGETDQSKYKGIRRRKWGKWVSEIRVPGTRQRLWLGSFSTAEGAAVAHDVAFYCL 60

Query: 61  RRPSNLD--HLNFPPTVLPLTNHLL---IRDDMSPGSIQKAASDAAMAVDAQY 109
            RPS+LD    NFP        HLL   +  ++SP SIQKAASDA MAVDA +
Sbjct: 61  HRPSSLDDESFNFP--------HLLTTSLASNISPKSIQKAASDAGMAVDAGF 105

[Close]
BLAST of Carg24978 vs. TAIR 10
Match: AT1G22810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 2.3e-28
Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 0 

Query: 13  KYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSNLDHLNFP 72
           KYKG+RRRKWGKWVSEIRVPG+++RLWLGS+S+ E AAVAHDVA++CL +P +L+ LNFP
Sbjct: 13  KYKGIRRRKWGKWVSEIRVPGTRDRLWLGSFSTAEGAAVAHDVAFFCLHQPDSLESLNFP 72

Query: 73  PTVLPLTNHLLIRDDMSPGSIQKAASDAAMAVDAQYICNNLPDRGSSGWAGTFQN 128
             + P    L+ R   SP SIQ+AAS+A MA+DA  + +   + G       ++N
Sbjct: 73  HLLNP---SLVSR--TSPRSIQQAASNAGMAIDAGIVHSTSVNSGCGDTTTYYEN 122

[Close]
BLAST of Carg24978 vs. TAIR 10
Match: AT1G44830.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-20
Identity = 54/105 (51.43%), Postives = 71/105 (67.62%), Query Frame = 0 

Query: 2   ASNSTSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLR 61
           +S S+SS   KKYKGVR R WG WVSEIR P  + R+WLGSYS+ EAAA A+D A  CL 
Sbjct: 23  SSTSSSSIRMKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCL- 82

Query: 62  RPSNLDHLNFP---PTVLPLTNHLLIRDDMSPGSIQKAASDAAMA 104
           + S+ ++LNFP    ++  + N+    +DMSP SIQ+ A+ AA A
Sbjct: 83  KGSSANNLNFPEISTSLYHIINNGDNNNDMSPKSIQRVAAAAAAA 126

[Close]
BLAST of Carg24978 vs. TAIR 10
Match: AT1G19210.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 3.9e-20
Identity = 64/153 (41.83%), Postives = 85/153 (55.56%), Query Frame = 0 

Query: 6   TSSCDTKKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHDVAYYCLRRPSN 65
           +SS    KYKGVR+RKWGKWVSEIR+P S+ER+WLGSY +PE AA A D A YCLR   N
Sbjct: 4   SSSSMQSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLR--GN 63

Query: 66  LDHLNFP--PTVLPLTNHL--------------LIRDDMSPGS---IQKAASDAAMAVDA 125
               NFP  P V+    +L                 DD S G+   I++ ++  +M VD+
Sbjct: 64  NAKFNFPDNPPVISGGRNLSRSEIREAAARFANSAEDDSSGGAGYEIRQESASTSMDVDS 123

Query: 126 QYICNNLPDRGSSGWAGTFQNYTAPNDQDLSVE 140
           +++ + LP  GS  +A  F  +  P   D S E
Sbjct: 124 EFL-SMLPTVGSGNFASEFGLF--PGFDDFSDE 151

[Close]
BLAST of Carg24978 vs. TAIR 10
Match: AT1G21910.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 1.9e-19
Identity = 56/112 (50.00%), Postives = 73/112 (65.18%), Query Frame = 0 

Query: 2   ASNSTSSCDT-------KKYKGVRRRKWGKWVSEIRVPGSQERLWLGSYSSPEAAAVAHD 61
           +S+S+SSC         KKYKGVR R WG WVSEIR P  + R+WLGSYS+ EAAA A+D
Sbjct: 31  SSSSSSSCKNKNKKSKIKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYD 90

Query: 62  VAYYCLRRPSNLDHLNFPPTVLPLTNHLL--IRDD---MSPGSIQKAASDAA 102
           VA  CL+ P    +LNFP +    ++HLL  + D+   +SP SIQ+ A+ AA
Sbjct: 91  VALLCLKGPQ--ANLNFPTS--SSSHHLLDNLLDENTLLSPKSIQRVAAQAA 138

The following BLAST results are available for this feature:
BLAST of Carg24978 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7015884.14.8e-81100.00Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... [more]
XP_022939510.12.8e-7399.28ethylene-responsive transcription factor ERF020 [Cucurbita moschata] >XP_0235514... [more]
XP_022993221.17.0e-7297.12ethylene-responsive transcription factor ERF020 [Cucurbita maxima][more]
XP_038886239.11.7e-6288.49ethylene-responsive transcription factor ERF020 [Benincasa hispida][more]
KAG7033420.12.1e-6086.52Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... [more]
BLAST of Carg24978 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C9I83.1e-3061.95Ethylene-responsive transcription factor ERF020 OS=Arabidopsis thaliana OX=3702 ... [more]
O805423.2e-2753.91Ethylene-responsive transcription factor ERF019 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9LPE81.9e-1951.43Ethylene-responsive transcription factor ERF014 OS=Arabidopsis thaliana OX=3702 ... [more]
Q84QC25.4e-1941.83Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9SFE42.7e-1850.00Ethylene-responsive transcription factor ERF012 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Carg24978 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FMW61.4e-7399.28ethylene-responsive transcription factor ERF020 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JVQ73.4e-7297.12ethylene-responsive transcription factor ERF020 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1HG658.6e-6085.11ethylene-responsive transcription factor ERF020-like OS=Cucurbita moschata OX=36... [more]
A0A5A7T2823.3e-5982.76Ethylene-responsive transcription factor ERF019 OS=Cucumis melo var. makuwa OX=1... [more]
A0A1S3B2T23.3e-5982.76ethylene-responsive transcription factor ERF019 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of Carg24978 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G71520.12.2e-3161.95Integrase-type DNA-binding superfamily protein [more]
AT1G22810.12.3e-2853.91Integrase-type DNA-binding superfamily protein [more]
AT1G44830.11.3e-2051.43Integrase-type DNA-binding superfamily protein [more]
AT1G19210.13.9e-2041.83Integrase-type DNA-binding superfamily protein [more]
AT1G21910.11.9e-1950.00Integrase-type DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 36..52
score: 47.91
coord: 14..25
score: 63.33
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 13..78
e-value: 6.9E-25
score: 98.7
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 13..62
e-value: 4.0E-10
score: 39.8
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 13..72
score: 21.311447
IPR001471AP2/ERF domainCDDcd00018AP2coord: 12..74
e-value: 1.80812E-25
score: 90.0235
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 12..73
e-value: 2.3E-20
score: 74.5
NoneNo IPR availablePANTHERPTHR31985:SF45ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF020coord: 4..114
NoneNo IPR availablePANTHERPTHR31985ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATEDcoord: 4..114
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 13..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24978-RACarg24978-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity